BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00016947
         (342 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                                58   2e-06
gb|AEJ72569.1| putative reverse transcriptase family member [Mal...    58   2e-06
gb|AAT40500.1| Putative reverse transcriptase, identical [Solanu...    56   5e-06
gb|EXC04195.1| Protein IQ-DOMAIN 32 [Morus notabilis]                  56   6e-06
gb|EMS60091.1| Retinoblastoma-related protein 1 [Triticum urartu]      55   8e-06
gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                55   8e-06

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
 Frame = +1

Query: 70   LCDKLVSLRLKGKFYDLVIRLAMV*GS*FWVTKKQ-VYKTNVANMNMLKWMVNKI*KDNL 246
            LCD+ + L+LKGKFY   IR AM+ G+  W  K Q V+K  VA M ML+WM     KD +
Sbjct: 832  LCDRRMPLKLKGKFYRTAIRPAMLYGTECWAVKHQHVHKMGVAEMRMLRWMCGHTRKDKI 891

Query: 247  RFTIHETL--EVGVGEM 291
            R   +E +  +VGV E+
Sbjct: 892  R---NEDIRGKVGVAEI 905


>gb|AEJ72569.1| putative reverse transcriptase family member [Malus domestica]
          Length = 212

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
 Frame = +1

Query: 70  LCDKLVSLRLKGKFYDLVIRLAMV*GS*FWVTKKQ-VYKTNVANMNMLKWMVNKI*KDNL 246
           LCD+ + L+LKGKFY   IR AM+ G+  W  K Q V+K  VA M ML+WM     KD +
Sbjct: 58  LCDRCMPLKLKGKFYRTTIRPAMLYGTECWAVKYQHVHKMGVAEMRMLRWMCGHTRKDKI 117

Query: 247 RFTIHETL--EVGVGEM 291
           R   +E +  +VGV E+
Sbjct: 118 R---NEDIRGKVGVAEI 131


>gb|AAT40500.1| Putative reverse transcriptase, identical [Solanum demissum]
          Length = 213

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
 Frame = +1

Query: 70  LCDKLVSLRLKGKFYDLVIRLAMV*GS*FWVTKK-QVYKTNVANMNMLKWMVNKI*KDNL 246
           LCDK + L+LKGKFY +V+R A++ G+  W  K   V+K +VA M ML+WM      D +
Sbjct: 72  LCDKKIPLKLKGKFYRVVVRPALLYGAECWPVKNAHVHKMHVAEMRMLRWMCGHTRSDKI 131

Query: 247 R 249
           R
Sbjct: 132 R 132


>gb|EXC04195.1| Protein IQ-DOMAIN 32 [Morus notabilis]
          Length = 1059

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
 Frame = +1

Query: 70  LCDKLVSLRLKGKFYDLVIRLAMV*GS*FWVTKK-QVYKTNVANMNMLKWMVNKI*KDNL 246
           LCD  + ++LKGKFY   IR +M+ GS  W  K+ Q+YK +VA M ML+WM   +  D +
Sbjct: 187 LCDNKMPIKLKGKFYRTAIRPSMLYGSECWAIKRQQIYKMSVAEMRMLRWMNGYMRMDRI 246

Query: 247 R 249
           R
Sbjct: 247 R 247


>gb|EMS60091.1| Retinoblastoma-related protein 1 [Triticum urartu]
          Length = 747

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
 Frame = +1

Query: 70  LCDKLVSLRLKGKFYDLVIRLAMV*GS*FWVTKKQ-VYKTNVANMNMLKWMVNKI*KDNL 246
           LCDK V  +LKGKFY + +R AM+ G+  W+TK++ V +  VA M +L+WM     KD +
Sbjct: 181 LCDKRVPQKLKGKFYRMTVRPAMLYGAECWLTKRRHVQQLGVAEMRVLRWMCGHTRKDRV 240

Query: 247 R 249
           R
Sbjct: 241 R 241


>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
 Frame = +1

Query: 70  LCDKLVSLRLKGKFYDLVIRLAMV*GS*FWVTKK-QVYKTNVANMNMLKWMVNKI*KDNL 246
           LCDK +S +LKGKFY +V+R A++ G+  W  K   V+K +VA M ML+WM      D +
Sbjct: 540 LCDKKISPKLKGKFYRVVVRPALLYGAECWPVKNAHVHKMHVAEMRMLRWMCGHTRSDKI 599

Query: 247 R 249
           R
Sbjct: 600 R 600