BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00016772
         (2567 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006858584.1| hypothetical protein AMTR_s00071p00188270 [A...   521   e-145
ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Popu...   498   e-138
emb|CBI29694.3| unnamed protein product [Vitis vinifera]              492   e-136
ref|XP_006385052.1| Smg-4/UPF3 family protein [Populus trichocar...   491   e-136
ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts...   473   e-130
ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citr...   471   e-130
ref|XP_007041200.1| Smg-4/UPF3 family protein, putative isoform ...   466   e-128
ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Popu...   461   e-127
ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts...   438   e-120
gb|EYU26454.1| hypothetical protein MIMGU_mgv1a004529mg [Mimulus...   436   e-119
gb|EYU26453.1| hypothetical protein MIMGU_mgv1a004529mg [Mimulus...   434   e-118
ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264...   430   e-117
ref|XP_007041201.1| Smg-4/UPF3 family protein, putative isoform ...   422   e-115
ref|XP_004485448.1| PREDICTED: regulator of nonsense transcripts...   419   e-114
ref|XP_007221816.1| hypothetical protein PRUPE_ppa004923mg [Prun...   414   e-112
ref|XP_007221815.1| hypothetical protein PRUPE_ppa004923mg [Prun...   414   e-112
ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts...   405   e-110
ref|XP_004485447.1| PREDICTED: regulator of nonsense transcripts...   401   e-109
ref|XP_006592654.1| PREDICTED: regulator of nonsense transcripts...   399   e-108
ref|XP_006598794.1| PREDICTED: regulator of nonsense transcripts...   399   e-108

>ref|XP_006858584.1| hypothetical protein AMTR_s00071p00188270 [Amborella trichopoda]
            gi|548862693|gb|ERN20051.1| hypothetical protein
            AMTR_s00071p00188270 [Amborella trichopoda]
          Length = 599

 Score =  521 bits (1342), Expect = e-145
 Identities = 312/612 (50%), Positives = 385/612 (62%), Gaps = 8/612 (1%)
 Frame = +1

Query: 109  MKDPSDRTKVVLRHLPPGISQSALVDQIDSRFSGRYRWFCFRPGKISQTYQLYSRAYIDF 288
            MKDP DRTKVV+R LPP ++Q AL+++IDSRFSGRY W  FRPGK S   Q +SR YIDF
Sbjct: 1    MKDPLDRTKVVVRRLPPALTQQALMEKIDSRFSGRYEWAAFRPGKNSLKNQRHSRIYIDF 60

Query: 289  NGREDVVEFAEFFDGRVFVNERGAQFKCIVEYAPSQRGPKSSSKKDGREGTISKDPEYLE 468
               EDV+EFAEFF G VFVNE+G+QFK +VEYAPSQR PK  SKKDGREGTI KDPEYLE
Sbjct: 61   KRPEDVLEFAEFFVGHVFVNEKGSQFKAVVEYAPSQRVPKPWSKKDGREGTIFKDPEYLE 120

Query: 469  FLEFLAKPVENLPSAEIQLERREAERAGAVKETPIVTPLMDFVRQKRAAKSGNQRSSSNG 648
            FLEFLAKP ENLPSAEIQLERREAERAGA KE+ IVTPLMDFVRQKRAAKSG  RSS+NG
Sbjct: 121  FLEFLAKPAENLPSAEIQLERREAERAGASKESLIVTPLMDFVRQKRAAKSGTLRSSANG 180

Query: 649  KLSRKAAGGSSGNTRSASTKRGLEKRKMSTSMYVLRDSGKNASGKDKATYILVPRREDQQ 828
            K SR++ G SS +  S S KRG E+RK+STSMYVLRDS K  S KDK+TY LVPRR++Q+
Sbjct: 181  KTSRRSTGVSSTSPGSNSQKRGPERRKISTSMYVLRDSTKGTSSKDKSTYGLVPRRDEQK 240

Query: 829  LSDKSISVSATTGHEKIDDQSAPSIDGPNGGEAQTVAPXXXXXXXXXXXEQGTTLVSRVV 1008
            L D S +VSA  G E +DD+S    D        T+             ++  +  S  V
Sbjct: 241  LPDNSSAVSALAGPEALDDESVGVADVTAATVGGTLESGKKKVLLLKGKDREASQASGSV 300

Query: 1009 SQQQSETSHAKNFPVSTS-KLNQQHEARARMIRGILSNKEAR-XXXXXXXXXXXXXXXLD 1182
             QQQ+ +S  +N   S   + +Q+ +  +RM++ ILSNK+ R                L 
Sbjct: 301  VQQQTVSSPIRNLSGSAPFRQSQRRDGNSRMVKSILSNKDGRQVPAHVLTQTEQQLQGLS 360

Query: 1183 LE-DKXXXXXXXXXXISKDHFXXXXXXXXXXXXDMKKAPDDKVVGNGHHTTGHINEKKDK 1359
            LE DK           SKDH             D KKA D K+ GN  +     NEK++K
Sbjct: 361  LEKDKRPPRPNSTRLASKDHLSGYLMPTSMSDSDPKKALDQKITGNDSYGLVPANEKQEK 420

Query: 1360 RTRNKDRPDRGFWTPLRRSDGLHASDECXXXXXXXXXXXXXXXXEEKTIAQDVALSAVDV 1539
            RTRNKDRPDR  WTPLRRSDG+H  DE                 E+ + AQ++ L   D 
Sbjct: 421  RTRNKDRPDRAVWTPLRRSDGIHTVDE---------SQMTSDSLEKLSNAQELKLG--DD 469

Query: 1540 IEDID--SSNKPSFPGE-KTQSLD-NSTQSGRGGMSPSAYDVPLSHVEVKVDMLPNASRG 1707
             E+ D   SN  S  G+ +T  L  ++++SGRG  S S+ +  L+  + K D   +ASR 
Sbjct: 470  TEECDGLGSNASSSMGKSRTSDLGYHNSRSGRGASSSSS-EHSLNQGDTKFD-TSSASRS 527

Query: 1708 GQMKSYGSARGNFSLIENGSHRHS-RRGPSHGGKDVDNFLVPVEGKPSKRGGATSHGSHE 1884
             +MK+ G+ R +   +ENGSHRH+ RR  S G KD D  +   +GKP KRGG  S+G+HE
Sbjct: 528  LEMKTQGTGRSSTVSVENGSHRHAGRRSSSTGLKDADGSMNLPDGKPVKRGGIPSYGAHE 587

Query: 1885 KQVWVQKSGAGS 1920
            KQ+WVQKSG G+
Sbjct: 588  KQIWVQKSGTGT 599


>ref|XP_006385051.1| hypothetical protein POPTR_0004s23450g [Populus trichocarpa]
            gi|550341819|gb|ERP62848.1| hypothetical protein
            POPTR_0004s23450g [Populus trichocarpa]
          Length = 520

 Score =  498 bits (1282), Expect = e-138
 Identities = 295/597 (49%), Positives = 366/597 (61%), Gaps = 1/597 (0%)
 Frame = +1

Query: 121  SDRTKVVLRHLPPGISQSALVDQIDSRFSGRYRWFCFRPGKISQTYQLYSRAYIDFNGRE 300
            SD+TKVV+RHLPPGISQ   V+QID  FSGRY W  +RPG  SQ +Q YSRAYIDF   E
Sbjct: 7    SDKTKVVVRHLPPGISQPMFVEQIDVAFSGRYNWLSYRPGNNSQKHQSYSRAYIDFKRPE 66

Query: 301  DVVEFAEFFDGRVFVNERGAQFKCIVEYAPSQRGPKSSSKKDGREGTISKDPEYLEFLEF 480
            DV++FAEFF+G +FVNE+G QFK IVEY+PSQR PK  SKKDGREGTISKDPEYLEFLE 
Sbjct: 67   DVIDFAEFFNGHIFVNEKGTQFKAIVEYSPSQRVPKQWSKKDGREGTISKDPEYLEFLEL 126

Query: 481  LAKPVENLPSAEIQLERREAERAGAVKETPIVTPLMDFVRQKRAAKSGNQRSSSNGKLSR 660
            +AKPVENLPSAEIQLERREAERAGA K+ PIVTPLMDFVRQKR AK+G +R  SNGKLSR
Sbjct: 127  IAKPVENLPSAEIQLERREAERAGAAKDAPIVTPLMDFVRQKRVAKNGPRRILSNGKLSR 186

Query: 661  KAAGGSSGNTRSASTKRGLEKRKMSTSMYVLRDSGKNASGKDKATYILVPRREDQQLSDK 840
            +A  G SG+  S+S KRG EK+++ST+MYVLRD+ K+ SGKDK+TY+ VP+R+DQQLS+ 
Sbjct: 187  RA--GGSGSPSSSSLKRGSEKKRISTTMYVLRDTAKSTSGKDKSTYVHVPKRDDQQLSN- 243

Query: 841  SISVSATTGHEKIDDQSAPSIDGPNGGEAQTVAPXXXXXXXXXXXEQGTTLVSRVVSQQQ 1020
            ++++ + +G   ++D+S  S    +G +                 E+  +LV+  +SQQQ
Sbjct: 244  AVTLGSGSGTAVLEDESVVSGITDSGKK---------KILLLKGKEKEISLVTGTMSQQQ 294

Query: 1021 SETSHAKNFPVSTSKLNQQHEARARMIRGILSNKEARXXXXXXXXXXXXXXXLDLEDKXX 1200
            S +S  +N   ST+  +Q+ E   RMIR IL NK++R                +LE    
Sbjct: 295  SISSSDRNIISSTALKSQRRETSGRMIRSILLNKDSRHIRSSGVHSEPQMQTSNLE---- 350

Query: 1201 XXXXXXXXISKDHFXXXXXXXXXXXXDMKKAPDDKVVGNGHHTTGHINEKKDKRTRNKDR 1380
                      K+              D    PDDKVVGN  H  G  NEK++KRTRNKDR
Sbjct: 351  ----------KEKRPPRPPHAQLGLKDANGTPDDKVVGNDLH--GFPNEKQEKRTRNKDR 398

Query: 1381 PDRGFWTPLRRSDGLHASDECXXXXXXXXXXXXXXXXEEKTIAQDVALSAVDVIEDIDSS 1560
            PDRG WTPLRRSDG +ASDE                                        
Sbjct: 399  PDRGVWTPLRRSDGSYASDESLL------------------------------------- 421

Query: 1561 NKPSFPGEKTQSLDNSTQSGRGGMSPSAYDVPLSHVEVKVDMLPNASRGGQMKSYGSARG 1740
               S   + TQS+ +S+Q               +H +VKVD L    R G++K  GS RG
Sbjct: 422  ---SSASQSTQSVFDSSQG--------------NHGDVKVDSL--NLRSGEVKVLGSGRG 462

Query: 1741 NFSLIENGSHRH-SRRGPSHGGKDVDNFLVPVEGKPSKRGGATSHGSHEKQVWVQKS 1908
            N S ++NGSH+H  RRGPSH  +D D     VE K  KRGG++ +GSHEKQVWVQKS
Sbjct: 463  NHSSLDNGSHKHFGRRGPSHIVRDADG--STVEAKTPKRGGSSGYGSHEKQVWVQKS 517


>emb|CBI29694.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  492 bits (1267), Expect = e-136
 Identities = 298/611 (48%), Positives = 368/611 (60%), Gaps = 8/611 (1%)
 Frame = +1

Query: 109  MKDPSDRTKVVLRHLPPGISQSALVDQIDSRFSGRYRWFCFRPGKISQTYQLYSRAYIDF 288
            MK P DRTKVV+RHLPP IS++A ++QID+ F GRY    FRPGK SQ  Q YSRAY+DF
Sbjct: 1    MKGPLDRTKVVVRHLPPTISEAAFLEQIDTVFKGRYTLVKFRPGKNSQKRQSYSRAYLDF 60

Query: 289  NGREDVVEFAEFFDGRVFVNERGAQFKCIVEYAPSQRGPKSSSKKDGREGTISKDPEYLE 468
               EDV+EFAEFFDG VFVNE+G QFK IVEYAPSQR PK   KKDGREGTI KDPEY+E
Sbjct: 61   KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRIPKHWPKKDGREGTIFKDPEYME 120

Query: 469  FLEFLAKPVENLPSAEIQLERREAERAGAVKETPIVTPLMDFVRQKRAAKSGNQRSSSNG 648
            F+E LAKPVENLPSAEIQLERREAERAGAVK+TPIVTPLMDFVRQKRAAK  ++RS SNG
Sbjct: 121  FVELLAKPVENLPSAEIQLERREAERAGAVKDTPIVTPLMDFVRQKRAAKGVSRRSLSNG 180

Query: 649  KLSRKAAGGSSGNTRSASTKRGLEKRKMSTSMYVLRDSGKNASGKDKATYILVPRREDQQ 828
            KLSR+A+G SSGN    S+KRG EKR++ST+MYVLRD+ K+ S KDK+T+ILVP+R+DQ 
Sbjct: 181  KLSRRASGSSSGNPSLGSSKRGSEKRRLSTTMYVLRDTAKSTSAKDKSTFILVPKRDDQL 240

Query: 829  LSDKSISVSATTGHEKIDDQSAPSIDGPNGGEAQTVAPXXXXXXXXXXXEQGTTLVSRVV 1008
            LSDKS++++A  G E ++++S  S    + G+ + +                     R +
Sbjct: 241  LSDKSVNLAAGGGAEALEEESGVS-GAVDAGKKKVLLLKGK---------------EREI 284

Query: 1009 SQ---QQSETSHAKN-FPVSTSKLNQQHEARARMIRGILSNKEARXXXXXXXXXXXXXXX 1176
            S    QQ+ TS  KN    +  K NQ+ E   R+IR IL NK+AR               
Sbjct: 285  SHHLLQQNVTSPVKNILGANAPKQNQRREGSGRIIRSILLNKDARQSQSSMFQTEQQSQA 344

Query: 1177 LDLEDKXXXXXXXXXXISKDHFXXXXXXXXXXXXDMKKAPDDKVVGNGHHTTGHINEKKD 1356
             +LE +          ++                +   A DDKVVGN  H+   ++EK+D
Sbjct: 345  SNLEKEKRPPRPPHIQLAS--------------KETNGAQDDKVVGNDVHS--FVSEKQD 388

Query: 1357 KRTRNKDRPDRGFWTPLRRSDGLHASDECXXXXXXXXXXXXXXXXEEKTIAQDVALSAVD 1536
            KRTRNKDRPDRG WTPLRRSDG HASDE                          +LS+  
Sbjct: 389  KRTRNKDRPDRGVWTPLRRSDGSHASDE--------------------------SLSS-- 420

Query: 1537 VIEDIDSSNKPS---FPGEKTQSLDNSTQSGRGGMSPSAYDVPLSHVEVKVDMLPNASRG 1707
                  S+++P+   FP      + +   + R G             EVK          
Sbjct: 421  ------SASQPTSSDFPEGSHGEMRSDMSNARSG-------------EVK---------- 451

Query: 1708 GQMKSYGSARGNFSLIENGSHRHS-RRGPSHGGKDVDNFLVPVEGKPSKRGGATSHGSHE 1884
                + GS RG  S ++NGSH+HS RRGP+H  KD D   +  EGK SKRG A  +GSHE
Sbjct: 452  ----ALGSGRGGHSALDNGSHKHSGRRGPTHSVKDADGSSIVSEGKHSKRGSAPGYGSHE 507

Query: 1885 KQVWVQKSGAG 1917
            KQVWVQKS +G
Sbjct: 508  KQVWVQKSSSG 518


>ref|XP_006385052.1| Smg-4/UPF3 family protein [Populus trichocarpa]
            gi|550341820|gb|ERP62849.1| Smg-4/UPF3 family protein
            [Populus trichocarpa]
          Length = 527

 Score =  491 bits (1264), Expect = e-136
 Identities = 295/604 (48%), Positives = 366/604 (60%), Gaps = 8/604 (1%)
 Frame = +1

Query: 121  SDRTKVVLRHLPPGISQSALVDQIDSRFSGRYRWFCFRPGKISQTYQLYSRAYIDFNGRE 300
            SD+TKVV+RHLPPGISQ   V+QID  FSGRY W  +RPG  SQ +Q YSRAYIDF   E
Sbjct: 7    SDKTKVVVRHLPPGISQPMFVEQIDVAFSGRYNWLSYRPGNNSQKHQSYSRAYIDFKRPE 66

Query: 301  DVVEFAEFFDGRVFVNERGAQFKCIVEYAPSQRGPKSSSKKDGREGTISKDPEYLEFLEF 480
            DV++FAEFF+G +FVNE+G QFK IVEY+PSQR PK  SKKDGREGTISKDPEYLEFLE 
Sbjct: 67   DVIDFAEFFNGHIFVNEKGTQFKAIVEYSPSQRVPKQWSKKDGREGTISKDPEYLEFLEL 126

Query: 481  LAKPVENLPSAEIQLERREAERAGAVKETPIVTPLMDFVRQKRAAKSGNQRSSSNGKLSR 660
            +AKPVENLPSAEIQLERREAERAGA K+ PIVTPLMDFVRQKR AK+G +R  SNGKLSR
Sbjct: 127  IAKPVENLPSAEIQLERREAERAGAAKDAPIVTPLMDFVRQKRVAKNGPRRILSNGKLSR 186

Query: 661  KAAGGSSGNTRSASTKRGLEKRKMSTSMYVLRDSGKNASGKDKATYILVPRREDQQLSDK 840
            +A  G SG+  S+S KRG EK+++ST+MYVLRD+ K+ SGKDK+TY+ VP+R+DQQLS+ 
Sbjct: 187  RA--GGSGSPSSSSLKRGSEKKRISTTMYVLRDTAKSTSGKDKSTYVHVPKRDDQQLSN- 243

Query: 841  SISVSATTGHEKIDDQSAPSIDGPNGGEAQTVAPXXXXXXXXXXXEQGTTLVSRVVSQQQ 1020
            ++++ + +G   ++D+S  S    +G +                 E+  +LV+  +SQQQ
Sbjct: 244  AVTLGSGSGTAVLEDESVVSGITDSGKK---------KILLLKGKEKEISLVTGTMSQQQ 294

Query: 1021 SETSHAKNFPVSTSKLNQQHEARARMIRGILSNKEARXXXXXXXXXXXXXXXLDLEDKXX 1200
            S +S  +N   ST+  +Q+ E   RMIR IL NK++R                +LE    
Sbjct: 295  SISSSDRNIISSTALKSQRRETSGRMIRSILLNKDSRHIRSSGVHSEPQMQTSNLE---- 350

Query: 1201 XXXXXXXXISKDHFXXXXXXXXXXXXDMKKAPDDKVVGNGHHTTGHINEKKDKRTRNKDR 1380
                      K+              D    PDDKVVGN  H  G  NEK++KRTRNKDR
Sbjct: 351  ----------KEKRPPRPPHAQLGLKDANGTPDDKVVGNDLH--GFPNEKQEKRTRNKDR 398

Query: 1381 PDRGFWTPLRRSDGLHASDECXXXXXXXXXXXXXXXXEEKTIAQDVALSAVDVIEDIDSS 1560
            PDRG WTPLRRSDG +ASDE                                        
Sbjct: 399  PDRGVWTPLRRSDGSYASDESLL------------------------------------- 421

Query: 1561 NKPSFPGEKTQSLDNSTQSGRGGMSPSAYDVPLSHVEVKVDMLPNASRGGQMKSYGSARG 1740
               S   + TQS+ +S+Q               +H +VKVD L    R G++K  GS RG
Sbjct: 422  ---SSASQSTQSVFDSSQG--------------NHGDVKVDSL--NLRSGEVKVLGSGRG 462

Query: 1741 NFSLIENGSHRH-SRRGPSHGGKDVDNFLVPVEGKPSKRGGATSHGSHE-------KQVW 1896
            N S ++NGSH+H  RRGPSH  +D D     VE K  KRGG++ +GSHE       KQVW
Sbjct: 463  NHSSLDNGSHKHFGRRGPSHIVRDADG--STVEAKTPKRGGSSGYGSHEVCSLDSQKQVW 520

Query: 1897 VQKS 1908
            VQKS
Sbjct: 521  VQKS 524


>ref|XP_006492554.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Citrus
            sinensis]
          Length = 514

 Score =  473 bits (1218), Expect = e-130
 Identities = 292/606 (48%), Positives = 365/606 (60%), Gaps = 2/606 (0%)
 Frame = +1

Query: 109  MKDPSDRTKVVLRHLPPGISQSALVDQIDSRFSGRYRWFCFRPGKISQTYQLYSRAYIDF 288
            MK P DRTKVV+R+LPP I+Q A  +QID  F GRY W  FR GK SQ +Q  +RAY+DF
Sbjct: 1    MKGPLDRTKVVVRNLPPAITQPAFTEQIDGAFGGRYNWVSFRQGKTSQKHQSCARAYLDF 60

Query: 289  NGREDVVEFAEFFDGRVFVNERGAQFKCIVEYAPSQRGPKSSSKKDGREGTISKDPEYLE 468
               EDV+EFAEFF+G VFVNE+G QFK IVEYAPSQR PK  SKKDGREGT+ KDPEYLE
Sbjct: 61   KKPEDVLEFAEFFNGHVFVNEKGVQFKTIVEYAPSQRVPKQWSKKDGREGTLLKDPEYLE 120

Query: 469  FLEFLAKPVENLPSAEIQLERREAERAGAVKETPIVTPLMDFVRQKRAAKSGNQRSSSNG 648
            FLEF++KPVENLPSAEIQLERREAERAGA KE  IVTPLMDFVRQKRAAK+G +R  SNG
Sbjct: 121  FLEFISKPVENLPSAEIQLERREAERAGAAKEALIVTPLMDFVRQKRAAKAGPRRLLSNG 180

Query: 649  KLSRKAAGGSSGNTRSASTKRGLEKRKMSTSMYVLRDSGKNASGKDKATYILVPRREDQQ 828
            KLSR+A+G S+G+  S S+KRG +K+K ST+MYVLRD+ KN+SGKDK+TYILVP+R+DQ 
Sbjct: 181  KLSRRASGSSTGSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDDQD 240

Query: 829  LSDKSISVSATTGHEKIDDQSAPSIDGPNGGEAQTVAPXXXXXXXXXXXEQGTTLVSRVV 1008
              DK +S S+ TG E + ++S    +  +GG+ + +             E+  + VS  V
Sbjct: 241  F-DKPVSSSSATGSEVVLEESGVPANS-DGGKKKVL--------LLKGKEREISQVSGSV 290

Query: 1009 SQQQSETSHAKNFPVSTS-KLNQQHEARARMIRGILSNKEARXXXXXXXXXXXXXXXLDL 1185
            S QQS  +  KN   S + K NQ+ E   R+IRGIL NK+AR               L+ 
Sbjct: 291  SHQQS--ASVKNIISSPALKQNQRRENSGRIIRGILLNKDARQNQASGLHSEQQISNLE- 347

Query: 1186 EDKXXXXXXXXXXISKDHFXXXXXXXXXXXXDMKKAPDDKVVGNGHHTTGHINEKKDKRT 1365
            +DK          + K               D     DDKV+ N  H     +EK+++RT
Sbjct: 348  KDKRPPRPSHVHLVMK---------------DTNGVSDDKVIVNDLH-----SEKQERRT 387

Query: 1366 RNKDRPDRGFWTPLRRSDGLHASDECXXXXXXXXXXXXXXXXEEKTIAQDVALSAVDVIE 1545
            RNKDRPDR  WT LRRSDG + SDE                    + A  ++LSAVD   
Sbjct: 388  RNKDRPDRAAWT-LRRSDGSYQSDESL-----------------SSSASQLSLSAVD--- 426

Query: 1546 DIDSSNKPSFPGEKTQSLDNSTQSGRGGMSPSAYDVPLSHVEVKVDMLPNASRGGQMKSY 1725
                                   S  G +    +D+             +  R G++K+ 
Sbjct: 427  -----------------------SSEGNLGDGKFDL-------------SNMRSGEVKAV 450

Query: 1726 GSARGNFSLIENGSHRH-SRRGPSHGGKDVDNFLVPVEGKPSKRGGATSHGSHEKQVWVQ 1902
            G  R + S ++NGSHRH  RRGP+H  KD D+  V  EGKP +RGGA+ +GSHEKQVWVQ
Sbjct: 451  GGGRSSHSSVDNGSHRHIGRRGPTH-VKD-DSSPVMSEGKPLRRGGASGYGSHEKQVWVQ 508

Query: 1903 KSGAGS 1920
            KS +GS
Sbjct: 509  KSSSGS 514


>ref|XP_006431585.1| hypothetical protein CICLE_v10000901mg [Citrus clementina]
            gi|557533707|gb|ESR44825.1| hypothetical protein
            CICLE_v10000901mg [Citrus clementina]
          Length = 514

 Score =  471 bits (1211), Expect = e-130
 Identities = 291/606 (48%), Positives = 363/606 (59%), Gaps = 2/606 (0%)
 Frame = +1

Query: 109  MKDPSDRTKVVLRHLPPGISQSALVDQIDSRFSGRYRWFCFRPGKISQTYQLYSRAYIDF 288
            MK P DRTKVV+R+LPP I+Q A  +QID  F GRY W  FR GK SQ +Q  +RAY+DF
Sbjct: 1    MKGPLDRTKVVVRNLPPAITQPAFTEQIDGAFGGRYNWVSFRQGKTSQKHQSCARAYLDF 60

Query: 289  NGREDVVEFAEFFDGRVFVNERGAQFKCIVEYAPSQRGPKSSSKKDGREGTISKDPEYLE 468
               EDV+EFAEFF+G VFVNE+G QFK IVEYAPSQR PK  SKKDGREGT+ KDPEYLE
Sbjct: 61   KKPEDVLEFAEFFNGHVFVNEKGVQFKTIVEYAPSQRVPKQWSKKDGREGTLLKDPEYLE 120

Query: 469  FLEFLAKPVENLPSAEIQLERREAERAGAVKETPIVTPLMDFVRQKRAAKSGNQRSSSNG 648
            FLEF++KPVENLPSAEIQLERREAERAGA KE  IVTPLMDFVRQKRAAK+G +R  SNG
Sbjct: 121  FLEFISKPVENLPSAEIQLERREAERAGAAKEALIVTPLMDFVRQKRAAKAGPRRLLSNG 180

Query: 649  KLSRKAAGGSSGNTRSASTKRGLEKRKMSTSMYVLRDSGKNASGKDKATYILVPRREDQQ 828
            KLSR+A+G S+G+  S S+KRG +K+K ST+MYVLRD+ KN+SGKDK+TYILVP+R+DQ 
Sbjct: 181  KLSRRASGSSTGSPASGSSKRGSDKKKASTTMYVLRDTAKNSSGKDKSTYILVPKRDDQD 240

Query: 829  LSDKSISVSATTGHEKIDDQSAPSIDGPNGGEAQTVAPXXXXXXXXXXXEQGTTLVSRVV 1008
              DK +S S+ TG E + ++S    +  +GG+ + +             E+  + VS  V
Sbjct: 241  F-DKPVSSSSATGSEVVLEESGVPANS-DGGKKKVL--------LLKGKEREISQVSGSV 290

Query: 1009 SQQQSETSHAKNFPVSTS-KLNQQHEARARMIRGILSNKEARXXXXXXXXXXXXXXXLDL 1185
            S QQS  +  K    S + K NQ+ E   R+IRGIL NK+AR               L+ 
Sbjct: 291  SHQQS--ASVKTIISSPALKQNQRRENSGRIIRGILLNKDARQNQASGLHSEQQISNLE- 347

Query: 1186 EDKXXXXXXXXXXISKDHFXXXXXXXXXXXXDMKKAPDDKVVGNGHHTTGHINEKKDKRT 1365
            +DK          + K               D     DDKV+ N  H     +EK+++RT
Sbjct: 348  KDKRPPRPSHVQLVMK---------------DTNGVSDDKVIVNDLH-----SEKQERRT 387

Query: 1366 RNKDRPDRGFWTPLRRSDGLHASDECXXXXXXXXXXXXXXXXEEKTIAQDVALSAVDVIE 1545
            RNKDRPDR  WT LRRSDG + SDE                    + A  ++LSAVD   
Sbjct: 388  RNKDRPDRAAWT-LRRSDGSYQSDESL-----------------SSSASQLSLSAVD--- 426

Query: 1546 DIDSSNKPSFPGEKTQSLDNSTQSGRGGMSPSAYDVPLSHVEVKVDMLPNASRGGQMKSY 1725
                                   S  G +    +D+             +  R G++K+ 
Sbjct: 427  -----------------------SSEGNLGDGKFDL-------------SNMRSGEVKAV 450

Query: 1726 GSARGNFSLIENGSHRH-SRRGPSHGGKDVDNFLVPVEGKPSKRGGATSHGSHEKQVWVQ 1902
            G  R + S ++NGSHRH  RRGP+H  KD D   V  EGKP +RGGA+ +GSHEKQVWVQ
Sbjct: 451  GGGRSSHSSVDNGSHRHIGRRGPTH-VKD-DGSPVMSEGKPLRRGGASGYGSHEKQVWVQ 508

Query: 1903 KSGAGS 1920
            KS +GS
Sbjct: 509  KSSSGS 514


>ref|XP_007041200.1| Smg-4/UPF3 family protein, putative isoform 1 [Theobroma cacao]
            gi|508705135|gb|EOX97031.1| Smg-4/UPF3 family protein,
            putative isoform 1 [Theobroma cacao]
          Length = 514

 Score =  466 bits (1199), Expect = e-128
 Identities = 298/607 (49%), Positives = 356/607 (58%), Gaps = 3/607 (0%)
 Frame = +1

Query: 109  MKDPSDRTKVVLRHLPPGISQSALVDQIDSRFSGRYRWFCFRPGKISQTYQLYSRAYIDF 288
            MK   DRTKV+LRHLPP I+++ LV+Q+D+ FSGRY W  FRPGK SQ +Q YSRAYIDF
Sbjct: 1    MKGALDRTKVILRHLPPAITEAMLVEQVDTAFSGRYNWLSFRPGKSSQKHQSYSRAYIDF 60

Query: 289  NGREDVVEFAEFFDGRVFVNERGAQFKCIVEYAPSQRGPKSSSKKDGREGTISKDPEYLE 468
               EDV+EFAEFF+G VFVNE+G QFK IVEYAPSQR PK SSKKDGREGTI KD EYLE
Sbjct: 61   KRSEDVLEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKRSSKKDGREGTILKDLEYLE 120

Query: 469  FLEFLAKPVENLPSAEIQLERREAERAGAVKETPIVTPLMDFVRQKRAAKSGNQRSSSNG 648
            FLE L KPVENLPSAEIQLER+EAERAG  K+TPIVTPLMDFVRQKRAAK G++RS SNG
Sbjct: 121  FLECLGKPVENLPSAEIQLERKEAERAGVPKDTPIVTPLMDFVRQKRAAKGGSRRSLSNG 180

Query: 649  KLSRKAAGGSSGNTRSASTKRGLEKRKMSTSMYVLRDSGKNASGKDKATYILVPRREDQQ 828
            KLSR+A G S G   SAS+KRG EKR+ ST+MYVLRDS KNASGKDK+TYILV +R++QQ
Sbjct: 181  KLSRRAGGSSGGTPSSASSKRGSEKRRGSTTMYVLRDSLKNASGKDKSTYILVSKRDEQQ 240

Query: 829  LSDKSISVSATTGHEKIDDQSAPSIDGPNGGEAQTVAPXXXXXXXXXXXEQGTTLVSRVV 1008
            LSDK ++++++ G E  +++S   + G      + V             E+  + V+  V
Sbjct: 241  LSDKHVALASSMGTEISEEES--GVPGITDAVKKKV-------LLLKGKEKEISPVAGNV 291

Query: 1009 SQQQSETSHAKNFPVST-SKLNQQHEARARMIRGILSNKEARXXXXXXXXXXXXXXXLDL 1185
              QQ+ TS  K    ST +K N + E   RMIRGIL NK+AR                +L
Sbjct: 292  LHQQNVTSPIKTILGSTPTKQNSRRE--GRMIRGILLNKDARQNQSSGVQSEQQIRTSNL 349

Query: 1186 EDKXXXXXXXXXXISKDHFXXXXXXXXXXXXDMKKAPDDKVVGNGHHTTGHINEKKDKRT 1365
            E              KD              D   A DDKVVGN  H     +EK ++R 
Sbjct: 350  E--------------KDRRPPRHSHSHLVLKDTNTASDDKVVGNDLHG----SEKPERRC 391

Query: 1366 RNKDRPDRGFWTPLRRSDGLHASDECXXXXXXXXXXXXXXXXEEKTIAQDVALSAVDVIE 1545
            RNKDRPDRG WT LRRSDG +ASDE                    + A   AL  +D +E
Sbjct: 392  RNKDRPDRGVWT-LRRSDGSYASDE-----------------SMSSSASQSALIPLDPLE 433

Query: 1546 DIDSSNKPSFPGEKTQSLDNSTQSGRGGMSPSAYDVPLSHVEVKVDMLPNASRGGQMKSY 1725
                  K                            V LS+V           R  Q+K+ 
Sbjct: 434  GTYGDTK----------------------------VDLSNV-----------RSVQVKTV 454

Query: 1726 GSARGNFSLIENGSHRH--SRRGPSHGGKDVDNFLVPVEGKPSKRGGATSHGSHEKQVWV 1899
            GS R   S ++NGSH    SRRG    G  V +     +GKP KRG A  +GSHEKQVWV
Sbjct: 455  GSGRN--SSLDNGSHNKHVSRRGAVADGSSVMS-----DGKPGKRGCAAGYGSHEKQVWV 507

Query: 1900 QKSGAGS 1920
            QKS +GS
Sbjct: 508  QKSSSGS 514


>ref|XP_006389505.1| hypothetical protein POPTR_0022s00460g [Populus trichocarpa]
            gi|550312328|gb|ERP48419.1| hypothetical protein
            POPTR_0022s00460g [Populus trichocarpa]
          Length = 511

 Score =  461 bits (1187), Expect = e-127
 Identities = 281/601 (46%), Positives = 361/601 (60%), Gaps = 1/601 (0%)
 Frame = +1

Query: 121  SDRTKVVLRHLPPGISQSALVDQIDSRFSGRYRWFCFRPGKISQTYQLYSRAYIDFNGRE 300
            SD+TKVV+RHLPPG+SQ   V+QID  FSGRY W  +RPGK SQ +Q  SRAYIDF   +
Sbjct: 6    SDKTKVVVRHLPPGVSQPMFVEQIDLAFSGRYNWLSYRPGKSSQKHQSCSRAYIDFKRPD 65

Query: 301  DVVEFAEFFDGRVFVNERGAQFKCIVEYAPSQRGPKSSSKKDGREGTISKDPEYLEFLEF 480
            DV++FAEFF+G +FVNE+G QFK IVEYAPSQ  PK  SKKDGREGTI KDPEYLEFLEF
Sbjct: 66   DVIDFAEFFNGHLFVNEKGTQFKAIVEYAPSQHVPKQWSKKDGREGTILKDPEYLEFLEF 125

Query: 481  LAKPVENLPSAEIQLERREAERAGAVKETPIVTPLMDFVRQKRAAKSGNQRSSSNGKLSR 660
            +AKPVENLPSAEIQLERREAERAG  K+ PIVTPLM+F+RQKRAAKSG +R  SNGK SR
Sbjct: 126  IAKPVENLPSAEIQLERREAERAGVAKDAPIVTPLMEFIRQKRAAKSGPRRILSNGKPSR 185

Query: 661  KAAGGSSGNTRSASTKRGLEKRKMSTSMYVLRDSGKNASGKDKATYILVPRREDQQLSDK 840
            +A  G SG+  S+S+KRG EK++ ST+MYVLRD+ K  SGK+K+ Y  VP+ +D+QLS K
Sbjct: 186  RA--GGSGSPSSSSSKRGSEKKRASTTMYVLRDTVKGTSGKEKSIYAQVPKLDDRQLS-K 242

Query: 841  SISVSATTGHEKIDDQSAPSIDGPNGGEAQTVAPXXXXXXXXXXXEQGTTLVSRVVSQQQ 1020
            ++++ + +G E  ++++A  + G  G   + +                     + +S QQ
Sbjct: 243  AVTLGSGSGTEVSEEETA--VSGITGTGKKKILLLKGK--------------EKEISLQQ 286

Query: 1021 SETSHAKNFPVSTSKLNQQHEARARMIRGILSNKEARXXXXXXXXXXXXXXXLDLEDKXX 1200
            S +   +N   ST+  +Q+HE+  R+I+ IL NK++R                +LE    
Sbjct: 287  SISPSDRNIISSTALKSQRHESSGRVIKSILLNKDSRRIQSSGVQSEPQMQTSNLEKDKR 346

Query: 1201 XXXXXXXXISKDHFXXXXXXXXXXXXDMKKAPDDKVVGNGHHTTGHINEKKDKRTRNKDR 1380
                    + K               D    PDDKVVGN  H  G  NEK+++RTRNKDR
Sbjct: 347  PPRPPHALVLK---------------DANGTPDDKVVGNDLH--GFPNEKQERRTRNKDR 389

Query: 1381 PDRGFWTPLRRSDGLHASDECXXXXXXXXXXXXXXXXEEKTIAQDVALSAVDVIEDIDSS 1560
            PDR  WT LRRS+G +ASDE                    +++    LS           
Sbjct: 390  PDRVVWT-LRRSEGSYASDE--------------------SLSSSAYLS----------- 417

Query: 1561 NKPSFPGEKTQSLDNSTQSGRGGMSPSAYDVPLSHVEVKVDMLPNASRGGQMKSYGSARG 1740
                     TQS  +S+Q              ++H +VK D L    R G++K+ GS R 
Sbjct: 418  ---------TQSGFDSSQ--------------VNHGDVKADTL--NLRSGEVKALGSGRS 452

Query: 1741 NFSLIENGSHRHS-RRGPSHGGKDVDNFLVPVEGKPSKRGGATSHGSHEKQVWVQKSGAG 1917
            N S ++NGSH+HS RRGP H  +D D     VEGK  KRGGA+ +GSHEKQVWVQKS +G
Sbjct: 453  NHSSLDNGSHKHSGRRGPPHPVRDADG--STVEGKSLKRGGASGYGSHEKQVWVQKSSSG 510

Query: 1918 S 1920
            S
Sbjct: 511  S 511


>ref|XP_006349314.1| PREDICTED: regulator of nonsense transcripts UPF3-like [Solanum
            tuberosum]
          Length = 483

 Score =  438 bits (1126), Expect = e-120
 Identities = 272/605 (44%), Positives = 349/605 (57%), Gaps = 1/605 (0%)
 Frame = +1

Query: 109  MKDPSDRTKVVLRHLPPGISQSALVDQIDSRFSGRYRWFCFRPGKISQTYQLYSRAYIDF 288
            MK P DR+KVVLRHLPP ISQS L+DQ+DSRF+GRY WFCF PGK SQ +Q YSRAYI+F
Sbjct: 1    MKGPLDRSKVVLRHLPPTISQSMLLDQVDSRFAGRYNWFCFLPGKSSQKHQTYSRAYIEF 60

Query: 289  NGREDVVEFAEFFDGRVFVNERGAQFKCIVEYAPSQRGPKSSSKKDGREGTISKDPEYLE 468
               EDV+EFAEFFDG VFVNE+G QFK IVEYAPSQR PK  SKKDGREGTI KDPEYLE
Sbjct: 61   KMPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPKHWSKKDGREGTILKDPEYLE 120

Query: 469  FLEFLAKPVENLPSAEIQLERREAERAGAVKETPIVTPLMDFVRQKRAAKSGNQRSSSNG 648
            FLEF++KP+ENLPSAEIQLER+EAERAG+ K+ PIVTPLMD++RQKRAAKSG ++S +NG
Sbjct: 121  FLEFISKPIENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKSGARKSIANG 180

Query: 649  KLSRKAAGGSSGNTRSASTKRGLEKRKMSTSMYVLRDSGKNASGKDKATYILVPRREDQQ 828
            + +R+ +G S+G+  S+++KR  EKR+ ST+MYVLRDS K  SGKDK TYIL P+R+DQQ
Sbjct: 181  RPTRRTSGTSTGSPSSSASKRSSEKRRASTTMYVLRDSSKAGSGKDK-TYILAPKRDDQQ 239

Query: 829  LSDKSISVSATTGHEKIDDQSAPSIDGPNGGEAQTVAPXXXXXXXXXXXEQGTTLVSRVV 1008
             ++KS + +A +    +++++        GG A                        +++
Sbjct: 240  RAEKSGTSAAGSVANAVEEET--------GGAADVGK-------------------KKIL 272

Query: 1009 SQQQSETSHAKNFPVSTSKLNQQHEARARMIRGILSNKEARXXXXXXXXXXXXXXXLDLE 1188
              ++ E  +           NQ+ EA  R+IR IL  K+AR                  +
Sbjct: 273  LLKEKENPN-----------NQRREASGRIIRSILL-KDAR---------QNQAPSASQQ 311

Query: 1189 DKXXXXXXXXXXISKDHFXXXXXXXXXXXXDMKKAPDDKVVGNGHHTTGHINEKKDKRTR 1368
            DK          + KD              +   A +DKV+G   H      EK++KRTR
Sbjct: 312  DK--------HRVDKDKKPPRPPSVQLFQRETNGANEDKVLGADLHIVH--TEKQEKRTR 361

Query: 1369 NKDRPDRGFWTPLRRSDGLHASDECXXXXXXXXXXXXXXXXEEKTIAQDVALSAVDVIED 1548
             +DRPDRG WTPLRRSD LHASDE                          +LS+      
Sbjct: 362  IRDRPDRGVWTPLRRSDSLHASDE--------------------------SLSS----SA 391

Query: 1549 IDSSNKPSFPGEKTQSLDNSTQSGRGGMSPSAYDVPLSHVEVKVDMLPNASRGGQMKSYG 1728
              SS  P F     +     T+ G                      L NA RG + +  G
Sbjct: 392  SQSSEVPDF----VEGSQGETKHG----------------------LANA-RGAEFRPMG 424

Query: 1729 SARGNFSLIENGSHRH-SRRGPSHGGKDVDNFLVPVEGKPSKRGGATSHGSHEKQVWVQK 1905
            S R ++S  +NG+++H  RRG    G  V       EGKP +RGG +S+G+HEKQVWVQK
Sbjct: 425  SGRNSYSSFDNGTYKHGGRRGMRDDGISVG------EGKPLRRGGPSSYGTHEKQVWVQK 478

Query: 1906 SGAGS 1920
            S +G+
Sbjct: 479  SSSGT 483


>gb|EYU26454.1| hypothetical protein MIMGU_mgv1a004529mg [Mimulus guttatus]
          Length = 521

 Score =  436 bits (1122), Expect = e-119
 Identities = 267/608 (43%), Positives = 345/608 (56%), Gaps = 4/608 (0%)
 Frame = +1

Query: 109  MKDPSDRTKVVLRHLPPGISQSALVDQIDSRFSGRYRWFCFRPGKISQTYQLYSRAYIDF 288
            MK   DRTKVVLRHLPP ISQS LV+ +DSRFSGRY W  FRPGK S    +YSRAYIDF
Sbjct: 1    MKGSIDRTKVVLRHLPPTISQSNLVEHVDSRFSGRYGWLAFRPGKSSPRQPIYSRAYIDF 60

Query: 289  NGREDVVEFAEFFDGRVFVNERGAQFKCIVEYAPSQRGPKSSSKKDGREGTISKDPEYLE 468
            N  EDV+EFAEFF+G +FVNE+G QFK IVEYAPSQR PK  SKKDGR+GT+ KDPEYLE
Sbjct: 61   NTPEDVIEFAEFFNGHIFVNEKGTQFKAIVEYAPSQRVPKQWSKKDGRDGTLLKDPEYLE 120

Query: 469  FLEFLAKPVENLPSAEIQLERREAERAGAVKETPIVTPLMDFVRQKRAAKSGNQRSSSNG 648
            FLEF+AKPV NLPSAEIQLER+EAERAGA K  P+VTPLMD++RQKRAAK G +R+  NG
Sbjct: 121  FLEFIAKPVVNLPSAEIQLERKEAERAGAPKNVPVVTPLMDYIRQKRAAKGGARRTVLNG 180

Query: 649  KLSRKAAGGSSGNTRSASTKRGLEKRKMSTSMYVLRDSGKNASGKDKATYILVPRREDQQ 828
            K +R+  G  S N  S S++RG EKR+ +T+MYVLRD+ K  + K+ + Y L+ +++DQQ
Sbjct: 181  KPARRVGGTPSRNLVSGSSRRGSEKRRTNTTMYVLRDNSKIVTSKENSAYSLISKQDDQQ 240

Query: 829  LSDKSISVSATTGHEKIDDQSAPSIDGPNGGEAQTVAPXXXXXXXXXXXE----QGTTLV 996
            L DKS + +A +G+E        +++G  GG                  E     G++L+
Sbjct: 241  LVDKSFNSTAVSGNE--------ALEGERGGSGSIGTGKKVLLLKGKEKEIFNASGSSLL 292

Query: 997  SRVVSQQQSETSHAKNFPVSTSKLNQQHEARARMIRGILSNKEARXXXXXXXXXXXXXXX 1176
             +  ++  S+TSH      ++SK N + +A  R+IR IL N++                 
Sbjct: 293  HQ-NAETPSKTSHIS----ASSKQNPRRDASGRIIRSILLNRDTSQGQPLTGTQSELRVQ 347

Query: 1177 LDLEDKXXXXXXXXXXISKDHFXXXXXXXXXXXXDMKKAPDDKVVGNGHHTTGHINEKKD 1356
              L+D             KD              D   A + K+V N  +      EK++
Sbjct: 348  NPLQD-------------KDKRPPRPPSMQLLQKDTNGASEGKIVHNDLYAVP--TEKQE 392

Query: 1357 KRTRNKDRPDRGFWTPLRRSDGLHASDECXXXXXXXXXXXXXXXXEEKTIAQDVALSAVD 1536
            +RT+NKDRPDRG W PLRRSDG HASD+                                
Sbjct: 393  RRTKNKDRPDRGVWAPLRRSDGSHASDDSL------------------------------ 422

Query: 1537 VIEDIDSSNKPSFPGEKTQSLDNSTQSGRGGMSPSAYDVPLSHVEVKVDMLPNASRGGQM 1716
                       S  G +T  + +  +  R              VE K DM    +RGG  
Sbjct: 423  -----------SSSGSQTSQVVDPAEGTR--------------VERKHDM--PVARGGDY 455

Query: 1717 KSYGSARGNFSLIENGSHRHSRRGPSHGGKDVDNFLVPVEGKPSKRGGATSHGSHEKQVW 1896
            +S GS RGN    +NGS+R  RRG ++  KD D +   VEGKP K+ GA+ +G +EK+VW
Sbjct: 456  RSTGSGRGNNYSADNGSYR-GRRGSAYIVKDADGYST-VEGKPLKKVGASVYGPNEKRVW 513

Query: 1897 VQKSGAGS 1920
            VQKSG+GS
Sbjct: 514  VQKSGSGS 521


>gb|EYU26453.1| hypothetical protein MIMGU_mgv1a004529mg [Mimulus guttatus]
          Length = 522

 Score =  434 bits (1116), Expect = e-118
 Identities = 268/609 (44%), Positives = 345/609 (56%), Gaps = 5/609 (0%)
 Frame = +1

Query: 109  MKDPSDRTKVVLRHLPPGISQSALVDQIDSRFSGRYRWFCFRPGKISQTYQLYSRAYIDF 288
            MK   DRTKVVLRHLPP ISQS LV+ +DSRFSGRY W  FRPGK S    +YSRAYIDF
Sbjct: 1    MKGSIDRTKVVLRHLPPTISQSNLVEHVDSRFSGRYGWLAFRPGKSSPRQPIYSRAYIDF 60

Query: 289  NGREDVVEFAEFFDGRVFVNERGAQFKCIVEYAPSQRGPKSSSKKDGREGTISKDPEYLE 468
            N  EDV+EFAEFF+G +FVNE+G QFK IVEYAPSQR PK  SKKDGR+GT+ KDPEYLE
Sbjct: 61   NTPEDVIEFAEFFNGHIFVNEKGTQFKAIVEYAPSQRVPKQWSKKDGRDGTLLKDPEYLE 120

Query: 469  FLEFLAKPVENLPSAEIQLERREAERAGAVKETPIVTPLMDFVRQKRAAKSG-NQRSSSN 645
            FLEF+AKPV NLPSAEIQLER+EAERAGA K  P+VTPLMD++RQKRAAK G  QR+  N
Sbjct: 121  FLEFIAKPVVNLPSAEIQLERKEAERAGAPKNVPVVTPLMDYIRQKRAAKGGARQRTVLN 180

Query: 646  GKLSRKAAGGSSGNTRSASTKRGLEKRKMSTSMYVLRDSGKNASGKDKATYILVPRREDQ 825
            GK +R+  G  S N  S S++RG EKR+ +T+MYVLRD+ K  + K+ + Y L+ +++DQ
Sbjct: 181  GKPARRVGGTPSRNLVSGSSRRGSEKRRTNTTMYVLRDNSKIVTSKENSAYSLISKQDDQ 240

Query: 826  QLSDKSISVSATTGHEKIDDQSAPSIDGPNGGEAQTVAPXXXXXXXXXXXE----QGTTL 993
            QL DKS + +A +G+E        +++G  GG                  E     G++L
Sbjct: 241  QLVDKSFNSTAVSGNE--------ALEGERGGSGSIGTGKKVLLLKGKEKEIFNASGSSL 292

Query: 994  VSRVVSQQQSETSHAKNFPVSTSKLNQQHEARARMIRGILSNKEARXXXXXXXXXXXXXX 1173
            + +  ++  S+TSH      ++SK N + +A  R+IR IL N++                
Sbjct: 293  LHQ-NAETPSKTSHIS----ASSKQNPRRDASGRIIRSILLNRDTSQGQPLTGTQSELRV 347

Query: 1174 XLDLEDKXXXXXXXXXXISKDHFXXXXXXXXXXXXDMKKAPDDKVVGNGHHTTGHINEKK 1353
               L+D             KD              D   A + K+V N  +      EK+
Sbjct: 348  QNPLQD-------------KDKRPPRPPSMQLLQKDTNGASEGKIVHNDLYAVP--TEKQ 392

Query: 1354 DKRTRNKDRPDRGFWTPLRRSDGLHASDECXXXXXXXXXXXXXXXXEEKTIAQDVALSAV 1533
            ++RT+NKDRPDRG W PLRRSDG HASD+                               
Sbjct: 393  ERRTKNKDRPDRGVWAPLRRSDGSHASDDSL----------------------------- 423

Query: 1534 DVIEDIDSSNKPSFPGEKTQSLDNSTQSGRGGMSPSAYDVPLSHVEVKVDMLPNASRGGQ 1713
                        S  G +T  + +  +  R              VE K DM    +RGG 
Sbjct: 424  ------------SSSGSQTSQVVDPAEGTR--------------VERKHDM--PVARGGD 455

Query: 1714 MKSYGSARGNFSLIENGSHRHSRRGPSHGGKDVDNFLVPVEGKPSKRGGATSHGSHEKQV 1893
             +S GS RGN    +NGS+R  RRG ++  KD D +   VEGKP K+ GA+ +G +EK+V
Sbjct: 456  YRSTGSGRGNNYSADNGSYR-GRRGSAYIVKDADGYST-VEGKPLKKVGASVYGPNEKRV 513

Query: 1894 WVQKSGAGS 1920
            WVQKSG+GS
Sbjct: 514  WVQKSGSGS 522


>ref|XP_004230442.1| PREDICTED: uncharacterized protein LOC101264766 [Solanum
            lycopersicum]
          Length = 485

 Score =  430 bits (1105), Expect = e-117
 Identities = 265/605 (43%), Positives = 341/605 (56%), Gaps = 1/605 (0%)
 Frame = +1

Query: 109  MKDPSDRTKVVLRHLPPGISQSALVDQIDSRFSGRYRWFCFRPGKISQTYQLYSRAYIDF 288
            MK P DR+KVVLRHLPP ISQS L+DQ+DSRF+GRY WFCF PGK SQ +Q YSRAYI+F
Sbjct: 1    MKGPLDRSKVVLRHLPPTISQSMLLDQVDSRFAGRYNWFCFLPGKSSQKHQTYSRAYIEF 60

Query: 289  NGREDVVEFAEFFDGRVFVNERGAQFKCIVEYAPSQRGPKSSSKKDGREGTISKDPEYLE 468
               EDV+EFAEFFDG VFVNE+G QFK IVEYAPSQR P+  SKKDGREGTI KDPEYLE
Sbjct: 61   KRPEDVIEFAEFFDGHVFVNEKGTQFKTIVEYAPSQRVPQHWSKKDGREGTILKDPEYLE 120

Query: 469  FLEFLAKPVENLPSAEIQLERREAERAGAVKETPIVTPLMDFVRQKRAAKSGNQRSSSNG 648
            FLEF++KP+ENLPSAEIQLER+EAERAG+ K+ PIVTPLMD++RQKRAAKSG ++S +NG
Sbjct: 121  FLEFISKPIENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYIRQKRAAKSGARKSIANG 180

Query: 649  KLSRKAAGGSSGNTRSASTKRGLEKRKMSTSMYVLRDSGKNASGKDKATYILVPRREDQQ 828
            + +R+A+G S+G+  S+++KR  EKR+ ST+MYVLRDS K  SGKDK TYIL P+R+DQQ
Sbjct: 181  RPTRRASGTSAGSPSSSASKRSSEKRRASTTMYVLRDSSKAGSGKDK-TYILAPKRDDQQ 239

Query: 829  LSDKSISVSATTGHEKIDDQSAPSIDGPNGGEAQTVAPXXXXXXXXXXXEQGTTLVSRVV 1008
             ++K    S T+    +    A +++   GG A                        +++
Sbjct: 240  RAEK----SGTSAPGSV----ANAVEEETGGAADVGK-------------------KKIL 272

Query: 1009 SQQQSETSHAKNFPVSTSKLNQQHEARARMIRGILSNKEARXXXXXXXXXXXXXXXLDLE 1188
              ++ E  +           NQ+ EA  R+IR IL  K+AR                   
Sbjct: 273  LLKEKEKENPN---------NQRREASGRIIRSILL-KDARQ-----------------N 305

Query: 1189 DKXXXXXXXXXXISKDHFXXXXXXXXXXXXDMKKAPDDKVVGNGHHTTGHINEKKDKRTR 1368
                        + KD              +   A +D+V+G   H      EK++KRTR
Sbjct: 306  QAPSASQQEKHRVDKDKKPPRPPSVQLFQRETNGANEDRVLGADLHVVH--TEKQEKRTR 363

Query: 1369 NKDRPDRGFWTPLRRSDGLHASDECXXXXXXXXXXXXXXXXEEKTIAQDVALSAVDVIED 1548
             +DRPDRG WTPLRRSD LHASDE                          A  + +V + 
Sbjct: 364  IRDRPDRGVWTPLRRSDSLHASDES---------------------LSSSASQSSEVPDF 402

Query: 1549 IDSSNKPSFPGEKTQSLDNSTQSGRGGMSPSAYDVPLSHVEVKVDMLPNASRGGQMKSYG 1728
            ++ S     PGE    L N                               +R  + +  G
Sbjct: 403  VEGS-----PGETKHGLVN-------------------------------ARVAEFRPMG 426

Query: 1729 SARGNFSLIENGSHRH-SRRGPSHGGKDVDNFLVPVEGKPSKRGGATSHGSHEKQVWVQK 1905
            S R + S  +NG+++H  RRG    G  V       EGKP +RGG +S+ +HEKQVWVQK
Sbjct: 427  SGRNSHSSFDNGTYKHGGRRGMRDDGISVG------EGKPLRRGGPSSYNTHEKQVWVQK 480

Query: 1906 SGAGS 1920
            S +G+
Sbjct: 481  SSSGT 485


>ref|XP_007041201.1| Smg-4/UPF3 family protein, putative isoform 2, partial [Theobroma
            cacao] gi|508705136|gb|EOX97032.1| Smg-4/UPF3 family
            protein, putative isoform 2, partial [Theobroma cacao]
          Length = 440

 Score =  422 bits (1085), Expect = e-115
 Identities = 250/452 (55%), Positives = 296/452 (65%), Gaps = 8/452 (1%)
 Frame = +1

Query: 109  MKDPSDRTKVVLRHLPPGISQSALVDQIDSRFSGRYRWFCFRPGKISQTYQLYSRAYIDF 288
            MK   DRTKV+LRHLPP I+++ LV+Q+D+ FSGRY W  FRPGK SQ +Q YSRAYIDF
Sbjct: 1    MKGALDRTKVILRHLPPAITEAMLVEQVDTAFSGRYNWLSFRPGKSSQKHQSYSRAYIDF 60

Query: 289  NGREDVVEFAEFFDGRVFVNERGAQFKCIVEYAPSQRGPKSSSKKDGREGTISK------ 450
               EDV+EFAEFF+G VFVNE+G QFK IVEYAPSQR PK SSKKDGREGTI K      
Sbjct: 61   KRSEDVLEFAEFFNGHVFVNEKGTQFKTIVEYAPSQRVPKRSSKKDGREGTILKVFLDEH 120

Query: 451  -DPEYLEFLEFLAKPVENLPSAEIQLERREAERAGAVKETPIVTPLMDFVRQKRAAKSGN 627
             D EYLEFLE L KPVENLPSAEIQLER+EAERAG  K+TPIVTPLMDFVRQKRAAK G+
Sbjct: 121  LDLEYLEFLECLGKPVENLPSAEIQLERKEAERAGVPKDTPIVTPLMDFVRQKRAAKGGS 180

Query: 628  QRSSSNGKLSRKAAGGSSGNTRSASTKRGLEKRKMSTSMYVLRDSGKNASGKDKATYILV 807
            +RS SNGKLSR+A G S G   SAS+KRG EKR+ ST+MYVLRDS KNASGKDK+TYILV
Sbjct: 181  RRSLSNGKLSRRAGGSSGGTPSSASSKRGSEKRRGSTTMYVLRDSLKNASGKDKSTYILV 240

Query: 808  PRREDQQLSDKSISVSATTGHEKIDDQSAPSIDGPNGGEAQTVAPXXXXXXXXXXXEQGT 987
             +R++QQLSDK ++++++ G E  +++S   + G      + V             E+  
Sbjct: 241  SKRDEQQLSDKHVALASSMGTEISEEES--GVPGITDAVKKKV-------LLLKGKEKEI 291

Query: 988  TLVSRVVSQQQSETSHAKNFPVST-SKLNQQHEARARMIRGILSNKEARXXXXXXXXXXX 1164
            + V+  V  QQ+ TS  K    ST +K N + E   RMIRGIL NK+AR           
Sbjct: 292  SPVAGNVLHQQNVTSPIKTILGSTPTKQNSRRE--GRMIRGILLNKDARQNQSSGVQSEQ 349

Query: 1165 XXXXLDLEDKXXXXXXXXXXISKDHFXXXXXXXXXXXXDMKKAPDDKVVGNGHHTTGHIN 1344
                 +LE              KD              D   A DDKVVGN  H     +
Sbjct: 350  QIRTSNLE--------------KDRRPPRHSHSHLVLKDTNTASDDKVVGNDLHG----S 391

Query: 1345 EKKDKRTRNKDRPDRGFWTPLRRSDGLHASDE 1440
            EK ++R RNKDRPDRG WT LRRSDG +ASDE
Sbjct: 392  EKPERRCRNKDRPDRGVWT-LRRSDGSYASDE 422


>ref|XP_004485448.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X2
            [Cicer arietinum] gi|502076758|ref|XP_004485449.1|
            PREDICTED: regulator of nonsense transcripts UPF3-like
            isoform X3 [Cicer arietinum]
            gi|502076762|ref|XP_004485450.1| PREDICTED: regulator of
            nonsense transcripts UPF3-like isoform X4 [Cicer
            arietinum]
          Length = 510

 Score =  419 bits (1078), Expect = e-114
 Identities = 262/602 (43%), Positives = 346/602 (57%), Gaps = 2/602 (0%)
 Frame = +1

Query: 121  SDRTKVVLRHLPPGISQSALVDQIDSRFSGRYRWFCFRPGKISQTYQLYSRAYIDFNGRE 300
            SDRTKVV+RHLPP IS+ +L   ID  FSGRY W  FRP KIS  +  +SRAYIDFN  E
Sbjct: 2    SDRTKVVVRHLPPTISEDSLSSLIDGSFSGRYNWLSFRPAKISPKHTSFSRAYIDFNKPE 61

Query: 301  DVVEFAEFFDGRVFVNERGAQFKCIVEYAPSQRGPKSSSKKDGREGTISKDPEYLEFLEF 480
            DV+EFAEFF+G VFVNE+G QFK  VEYAPSQR PK  SKKDGR+GTI KDPEYLEFLE 
Sbjct: 62   DVIEFAEFFNGHVFVNEKGTQFKVTVEYAPSQRVPKQWSKKDGRDGTIYKDPEYLEFLEL 121

Query: 481  LAKPVENLPSAEIQLERREAERAGAVKETPIVTPLMDFVRQKRAAKSGNQRSSSNGKLSR 660
            LAKPVENLPSAEIQLE+REAER+GA K+ PIVTPLMDFVRQKRAAK G +R SSNGK++R
Sbjct: 122  LAKPVENLPSAEIQLEKREAERSGAGKDVPIVTPLMDFVRQKRAAK-GPRRLSSNGKVTR 180

Query: 661  KAAGGSSGNTRSASTKRGLEKRKMSTSMYVLRDSGKNASGKDKATYILVPRREDQQLSDK 840
            +    S+G++ SA ++RG  ++++ST+MYV RD GKN++ KDK+TYILVPR+ DQ LS+K
Sbjct: 181  RTGTPSNGSSSSAPSRRGSARKRVSTTMYVARDPGKNSTVKDKSTYILVPRQGDQHLSNK 240

Query: 841  SISVSATTGHEKIDDQSAPSIDGPNGGEAQTVAPXXXXXXXXXXXEQGTTLVSRVVSQQQ 1020
            S +++++ G+   D+         NG      A            E  T   S  +SQ  
Sbjct: 241  SSNIASSDGNPTFDE---------NGIAGSNDAGKKVLLLKGKEREIITASDSDSMSQHH 291

Query: 1021 SETSHAKNFPVSTS-KLNQQHEARARMIRGILSNKEARXXXXXXXXXXXXXXXLDLEDKX 1197
            S TS AK    ST+ K NQ+HE   R+I+ ILSNK+ R                +LE   
Sbjct: 292  SITSSAKTILNSTALKQNQRHEGSGRIIKSILSNKDLRQNQSSRAYSERQLQTSNLE--- 348

Query: 1198 XXXXXXXXXISKDHFXXXXXXXXXXXXDMKKAPDDKVVGNGHHTTGHINEKKDKRTRNKD 1377
                       K+                  AP++++  +G H +   +E++++R R KD
Sbjct: 349  -----------KEKQPTRPLHVQLILKGTDGAPENRITVHGLHVS---SERQERRFRQKD 394

Query: 1378 RPDRGFWTPLRRSDGLHASDECXXXXXXXXXXXXXXXXEEKTIAQDVALSAVDVIEDIDS 1557
            RPDRG WT   RS+G    DE                         ++ SA   ++ ++ 
Sbjct: 395  RPDRGIWT--SRSNG---GDE------------------------SLSSSASSQVDPLEG 425

Query: 1558 SNKPSFPGEKTQSLDNSTQSGRGGMSPSAYDVPLSHVEVKVDMLPNASRGGQMKSYGSAR 1737
             +           L + T+S R G                           ++KS+GS R
Sbjct: 426  GH---------AELKHDTRSARSG---------------------------EVKSFGSLR 449

Query: 1738 GNFSLIENGSHRH-SRRGPSHGGKDVDNFLVPVEGKPSKRGGATSHGSHEKQVWVQKSGA 1914
             + S  ENG ++H  RRGP HG KDVD + V  EGK  ++  ++++GS+EKQVWVQK+ +
Sbjct: 450  ASHS-SENGFNKHFGRRGPIHGVKDVDGYSVSSEGKHPRKPSSSAYGSNEKQVWVQKASS 508

Query: 1915 GS 1920
            G+
Sbjct: 509  GT 510


>ref|XP_007221816.1| hypothetical protein PRUPE_ppa004923mg [Prunus persica]
            gi|462418752|gb|EMJ23015.1| hypothetical protein
            PRUPE_ppa004923mg [Prunus persica]
          Length = 485

 Score =  414 bits (1063), Expect = e-112
 Identities = 239/446 (53%), Positives = 294/446 (65%), Gaps = 2/446 (0%)
 Frame = +1

Query: 109  MKDPSDRTKVVLRHLPPGISQSALVDQIDSRFSGRYRWFCFRPGKISQTYQLYSRAYIDF 288
            +KD  DRTKVVLRHLPP ISQ++LV+QID  FSGRY W  FRPGK SQ    YSRAYID 
Sbjct: 2    LKDQLDRTKVVLRHLPPSISQTSLVEQIDVFFSGRYNWVAFRPGKRSQKNPSYSRAYIDL 61

Query: 289  NGREDVVEFAEFFDGRVFVNERGAQFKCIVEYAPSQRGPKSSSKKDGREGTISKDPEYLE 468
               EDV+EFAEFFDG +FVNE+G+QFK IVEYAPSQR PK  SKKDGREGTI +DPEYLE
Sbjct: 62   KRPEDVIEFAEFFDGHLFVNEKGSQFKVIVEYAPSQRVPKQWSKKDGREGTIFRDPEYLE 121

Query: 469  FLEFLAKPVENLPSAEIQLERREAERAGAVKETPIVTPLMDFVRQKRAAKSGNQRSSSNG 648
            FLEFLAKP ENLPSAEIQLERREAER+GA K+ PIVTPLMDFVRQKRA+K+G++RS +NG
Sbjct: 122  FLEFLAKPAENLPSAEIQLERREAERSGAGKDAPIVTPLMDFVRQKRASKAGSRRSLTNG 181

Query: 649  KLSRKAAGGSSGNTRSASTKRGLEKRKMSTSMYVLRDSGKNASGKDKATYILVPRREDQQ 828
            K SR+A G SS +   A++KRG E+++ S +MYVLRD+ KN S KDK+TYILVP+R+DQQ
Sbjct: 182  KTSRRAGGPSSRSPSLATSKRGSERKRNSATMYVLRDARKNTSAKDKSTYILVPKRDDQQ 241

Query: 829  LSDKSISVSATTGHEKIDDQSAPSIDGPNGGEAQTVAPXXXXXXXXXXXEQGTTLVSRVV 1008
             S+KS+++++  G   ++++S     G +G +A                E+  T V   +
Sbjct: 242  PSEKSVTLASAAGTHVLEEES-----GVSGADA-----VKKKILLLKGKEREITHVPANM 291

Query: 1009 SQQQSETSHAKNFPVSTS-KLNQQHEARARMIRGILSNKEARXXXXXXXXXXXXXXXLDL 1185
            SQQQS  S AKN   + + K N + +   R+IRGIL NK+AR                + 
Sbjct: 292  SQQQS--SSAKNMGGTIALKQNLRRQENGRIIRGILLNKDARQSQSSGIYSAQQIQTSNS 349

Query: 1186 E-DKXXXXXXXXXXISKDHFXXXXXXXXXXXXDMKKAPDDKVVGNGHHTTGHINEKKDKR 1362
            + DK          I K               D   APD  +VGN  H  G  +EK++KR
Sbjct: 350  DRDKRPPRSQHVQLILK---------------DTNGAPDYNIVGNDLH--GICSEKQEKR 392

Query: 1363 TRNKDRPDRGFWTPLRRSDGLHASDE 1440
             RNK+RPDR  WTPL R DG  ASDE
Sbjct: 393  IRNKERPDRVVWTPLNRLDGSSASDE 418



 Score = 62.0 bits (149), Expect = 1e-06
 Identities = 33/54 (61%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
 Frame = +1

Query: 1762 GSHRH-SRRGPSHGGKDVDNFLVPVEGKPSKRGGATSHGSHEKQVWVQKSGAGS 1920
            G H+H  RRG +HG KD+D   V  EGK SKRG    +GSHEKQVWVQKS +GS
Sbjct: 436  GCHKHHGRRGTTHGVKDLDGSPVAGEGKHSKRG----YGSHEKQVWVQKSSSGS 485


>ref|XP_007221815.1| hypothetical protein PRUPE_ppa004923mg [Prunus persica]
            gi|462418751|gb|EMJ23014.1| hypothetical protein
            PRUPE_ppa004923mg [Prunus persica]
          Length = 482

 Score =  414 bits (1063), Expect = e-112
 Identities = 239/446 (53%), Positives = 294/446 (65%), Gaps = 2/446 (0%)
 Frame = +1

Query: 109  MKDPSDRTKVVLRHLPPGISQSALVDQIDSRFSGRYRWFCFRPGKISQTYQLYSRAYIDF 288
            +KD  DRTKVVLRHLPP ISQ++LV+QID  FSGRY W  FRPGK SQ    YSRAYID 
Sbjct: 2    LKDQLDRTKVVLRHLPPSISQTSLVEQIDVFFSGRYNWVAFRPGKRSQKNPSYSRAYIDL 61

Query: 289  NGREDVVEFAEFFDGRVFVNERGAQFKCIVEYAPSQRGPKSSSKKDGREGTISKDPEYLE 468
               EDV+EFAEFFDG +FVNE+G+QFK IVEYAPSQR PK  SKKDGREGTI +DPEYLE
Sbjct: 62   KRPEDVIEFAEFFDGHLFVNEKGSQFKVIVEYAPSQRVPKQWSKKDGREGTIFRDPEYLE 121

Query: 469  FLEFLAKPVENLPSAEIQLERREAERAGAVKETPIVTPLMDFVRQKRAAKSGNQRSSSNG 648
            FLEFLAKP ENLPSAEIQLERREAER+GA K+ PIVTPLMDFVRQKRA+K+G++RS +NG
Sbjct: 122  FLEFLAKPAENLPSAEIQLERREAERSGAGKDAPIVTPLMDFVRQKRASKAGSRRSLTNG 181

Query: 649  KLSRKAAGGSSGNTRSASTKRGLEKRKMSTSMYVLRDSGKNASGKDKATYILVPRREDQQ 828
            K SR+A G SS +   A++KRG E+++ S +MYVLRD+ KN S KDK+TYILVP+R+DQQ
Sbjct: 182  KTSRRAGGPSSRSPSLATSKRGSERKRNSATMYVLRDARKNTSAKDKSTYILVPKRDDQQ 241

Query: 829  LSDKSISVSATTGHEKIDDQSAPSIDGPNGGEAQTVAPXXXXXXXXXXXEQGTTLVSRVV 1008
             S+KS+++++  G   ++++S     G +G +A                E+  T V   +
Sbjct: 242  PSEKSVTLASAAGTHVLEEES-----GVSGADA-----VKKKILLLKGKEREITHVPANM 291

Query: 1009 SQQQSETSHAKNFPVSTS-KLNQQHEARARMIRGILSNKEARXXXXXXXXXXXXXXXLDL 1185
            SQQQS  S AKN   + + K N + +   R+IRGIL NK+AR                + 
Sbjct: 292  SQQQS--SSAKNMGGTIALKQNLRRQENGRIIRGILLNKDARQSQSSGIYSAQQIQTSNS 349

Query: 1186 E-DKXXXXXXXXXXISKDHFXXXXXXXXXXXXDMKKAPDDKVVGNGHHTTGHINEKKDKR 1362
            + DK          I K               D   APD  +VGN  H  G  +EK++KR
Sbjct: 350  DRDKRPPRSQHVQLILK---------------DTNGAPDYNIVGNDLH--GICSEKQEKR 392

Query: 1363 TRNKDRPDRGFWTPLRRSDGLHASDE 1440
             RNK+RPDR  WTPL R DG  ASDE
Sbjct: 393  IRNKERPDRVVWTPLNRLDGSSASDE 418


>ref|XP_006339922.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Solanum tuberosum] gi|565345688|ref|XP_006339923.1|
            PREDICTED: regulator of nonsense transcripts UPF3-like
            isoform X2 [Solanum tuberosum]
            gi|565345690|ref|XP_006339924.1| PREDICTED: regulator of
            nonsense transcripts UPF3-like isoform X3 [Solanum
            tuberosum]
          Length = 508

 Score =  405 bits (1040), Expect = e-110
 Identities = 263/602 (43%), Positives = 334/602 (55%), Gaps = 4/602 (0%)
 Frame = +1

Query: 127  RTKVVLRHLPPGISQSALVDQIDSRFSGRYRWFCFRPGKISQTYQLYSRAYIDFNGREDV 306
            RTKVVLRHLPP +SQS L++ +DSRF+GRY WF FRP K S  +Q YS+AYIDF   EDV
Sbjct: 5    RTKVVLRHLPPTLSQSMLLEHVDSRFAGRYNWFTFRPAKTSLKHQSYSKAYIDFRNMEDV 64

Query: 307  VEFAEFFDGRVFVNERGAQFKCIVEYAPSQRGPKSSSKKDGREGTISKDPEYLEFLEFLA 486
             EFAEFFDG +FVNE+G QFK IVEYAPSQR PK   KKD REGTI KDP Y+EFLEFLA
Sbjct: 65   TEFAEFFDGHMFVNEKGTQFKTIVEYAPSQRVPKHWLKKDAREGTILKDPAYMEFLEFLA 124

Query: 487  KPVENLPSAEIQLERREAERAGAVKETPIVTPLMDFVRQKRAAKSGNQRSSSNGKLSRKA 666
            KPVENLPSAEIQLER+EAERAG+ K+ PIVTPLMD+VRQKRA KSG +RS SNGK S+  
Sbjct: 125  KPVENLPSAEIQLERKEAERAGSAKDAPIVTPLMDYVRQKRAVKSGARRSISNGKSSKSV 184

Query: 667  AGGSSGNTRSASTKRGLEKRKMSTSMYVLRDSGKNASGKDKATYILVPRREDQQLSDKSI 846
             G SS +  S +++RG EKR  ST+MYV RDS K  + KDK +YIL+P+R DQQLS KS 
Sbjct: 185  GGTSSRSPSSTASRRGSEKR-TSTTMYVQRDSSKAGNSKDK-SYILLPKRGDQQLSVKSG 242

Query: 847  SVSATTGHEKIDDQSAPSIDGPNGGEAQTVAPXXXXXXXXXXXEQGTTLVSRVVSQQQSE 1026
            S +  +  + ++ +   S+   +G +                 E+    VS     QQ+ 
Sbjct: 243  SSAPGSEIDVVEGEIGRSVTADSGKK---------KILLLKGKEKEGPNVSGGSLAQQNV 293

Query: 1027 TSHAKNFP-VSTSKLNQQHEARARMIRGILSNKEARXXXXXXXXXXXXXXXLDLEDKXXX 1203
            +S  KN P +S  K NQ+ EA  R+IR IL  K+AR                 ++D    
Sbjct: 294  SSALKNSPSLSALKQNQRQEASGRIIRSILL-KDARQNQSAFQSD-------QIQD---- 341

Query: 1204 XXXXXXXISKDHFXXXXXXXXXXXXDMKKAPDDKVVGNGHHTTGHINEKKDKRTRNKDRP 1383
                     KD              D   A +DKVVGN  H   HI EK+++R+RN+DRP
Sbjct: 342  ---------KDMRPPRPPSMQLFQKDTSGANEDKVVGNEKHVV-HI-EKQERRSRNRDRP 390

Query: 1384 DRGFWTPLRRSDGLHASDECXXXXXXXXXXXXXXXXEEKTIAQDVALSAVDVIEDIDSSN 1563
            DRG W PLRR+D   AS+                                          
Sbjct: 391  DRGVWAPLRRADSSQASN------------------------------------------ 408

Query: 1564 KPSFPGEKTQSLDNSTQSG---RGGMSPSAYDVPLSHVEVKVDMLPNASRGGQMKSYGSA 1734
                 G  +  +  S+Q      GG      D+P+             +RG + +  GS 
Sbjct: 409  -----GSLSSGIPQSSQVREFVEGGQGELKNDLPI-------------ARGTEFRPIGSG 450

Query: 1735 RGNFSLIENGSHRHSRRGPSHGGKDVDNFLVPVEGKPSKRGGATSHGSHEKQVWVQKSGA 1914
            R + S  +NG+++H   G   G +DV    +  EGKP K+GG +++ S EKQVWVQKS +
Sbjct: 451  RNSHSSADNGNYKH---GGRRGLRDVAGTSIG-EGKPVKKGGTSAYSSLEKQVWVQKSSS 506

Query: 1915 GS 1920
            GS
Sbjct: 507  GS 508


>ref|XP_004485447.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Cicer arietinum]
          Length = 517

 Score =  401 bits (1030), Expect = e-109
 Identities = 254/590 (43%), Positives = 335/590 (56%), Gaps = 2/590 (0%)
 Frame = +1

Query: 121  SDRTKVVLRHLPPGISQSALVDQIDSRFSGRYRWFCFRPGKISQTYQLYSRAYIDFNGRE 300
            SDRTKVV+RHLPP IS+ +L   ID  FSGRY W  FRP KIS  +  +SRAYIDFN  E
Sbjct: 2    SDRTKVVVRHLPPTISEDSLSSLIDGSFSGRYNWLSFRPAKISPKHTSFSRAYIDFNKPE 61

Query: 301  DVVEFAEFFDGRVFVNERGAQFKCIVEYAPSQRGPKSSSKKDGREGTISKDPEYLEFLEF 480
            DV+EFAEFF+G VFVNE+G QFK  VEYAPSQR PK  SKKDGR+GTI KDPEYLEFLE 
Sbjct: 62   DVIEFAEFFNGHVFVNEKGTQFKVTVEYAPSQRVPKQWSKKDGRDGTIYKDPEYLEFLEL 121

Query: 481  LAKPVENLPSAEIQLERREAERAGAVKETPIVTPLMDFVRQKRAAKSGNQRSSSNGKLSR 660
            LAKPVENLPSAEIQLE+REAER+GA K+ PIVTPLMDFVRQKRAAK G +R SSNGK++R
Sbjct: 122  LAKPVENLPSAEIQLEKREAERSGAGKDVPIVTPLMDFVRQKRAAK-GPRRLSSNGKVTR 180

Query: 661  KAAGGSSGNTRSASTKRGLEKRKMSTSMYVLRDSGKNASGKDKATYILVPRREDQQLSDK 840
            +    S+G++ SA ++RG  ++++ST+MYV RD GKN++ KDK+TYILVPR+ DQ LS+K
Sbjct: 181  RTGTPSNGSSSSAPSRRGSARKRVSTTMYVARDPGKNSTVKDKSTYILVPRQGDQHLSNK 240

Query: 841  SISVSATTGHEKIDDQSAPSIDGPNGGEAQTVAPXXXXXXXXXXXEQGTTLVSRVVSQQQ 1020
            S +++++ G+   D+         NG      A            E  T   S  +SQ  
Sbjct: 241  SSNIASSDGNPTFDE---------NGIAGSNDAGKKVLLLKGKEREIITASDSDSMSQHH 291

Query: 1021 SETSHAKNFPVSTS-KLNQQHEARARMIRGILSNKEARXXXXXXXXXXXXXXXLDLEDKX 1197
            S TS AK    ST+ K NQ+HE   R+I+ ILSNK+ R                +LE   
Sbjct: 292  SITSSAKTILNSTALKQNQRHEGSGRIIKSILSNKDLRQNQSSRAYSERQLQTSNLE--- 348

Query: 1198 XXXXXXXXXISKDHFXXXXXXXXXXXXDMKKAPDDKVVGNGHHTTGHINEKKDKRTRNKD 1377
                       K+                  AP++++  +G H +   +E++++R R KD
Sbjct: 349  -----------KEKQPTRPLHVQLILKGTDGAPENRITVHGLHVS---SERQERRFRQKD 394

Query: 1378 RPDRGFWTPLRRSDGLHASDECXXXXXXXXXXXXXXXXEEKTIAQDVALSAVDVIEDIDS 1557
            RPDRG WT   RS+G    DE                         ++ SA   ++ ++ 
Sbjct: 395  RPDRGIWT--SRSNG---GDE------------------------SLSSSASSQVDPLEG 425

Query: 1558 SNKPSFPGEKTQSLDNSTQSGRGGMSPSAYDVPLSHVEVKVDMLPNASRGGQMKSYGSAR 1737
             +           L + T+S R G                           ++KS+GS R
Sbjct: 426  GH---------AELKHDTRSARSG---------------------------EVKSFGSLR 449

Query: 1738 GNFSLIENGSHRH-SRRGPSHGGKDVDNFLVPVEGKPSKRGGATSHGSHE 1884
             + S  ENG ++H  RRGP HG KDVD + V  EGK  ++  ++++GS+E
Sbjct: 450  ASHS-SENGFNKHFGRRGPIHGVKDVDGYSVSSEGKHPRKPSSSAYGSNE 498


>ref|XP_006592654.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Glycine max] gi|571493781|ref|XP_006592655.1| PREDICTED:
            regulator of nonsense transcripts UPF3-like isoform X2
            [Glycine max]
          Length = 514

 Score =  399 bits (1025), Expect = e-108
 Identities = 256/608 (42%), Positives = 345/608 (56%), Gaps = 4/608 (0%)
 Frame = +1

Query: 109  MKDPSDRTKVVLRHLPPGISQSALVDQIDSRFSGRYRWFCFRPGKISQTYQLYSRAYIDF 288
            MK   DRTKVVLRHLPP IS++AL+ QID+ F+GRY W  FRPGKISQ +  +SRAYIDF
Sbjct: 1    MKGALDRTKVVLRHLPPSISEAALLSQIDAAFAGRYNWLSFRPGKISQKHMSFSRAYIDF 60

Query: 289  NGREDVVEFAEFFDGRVFVNERGAQFKCIVEYAPSQRGPKSSSKKDGREGTISKDPEYLE 468
               EDV+ FAEFF+G VFVN +G+QFK IVEYAPSQR P+  SKKD R+GTI KD EYLE
Sbjct: 61   KRPEDVILFAEFFNGHVFVNVKGSQFKVIVEYAPSQRVPRQWSKKDLRDGTIYKDSEYLE 120

Query: 469  FLEFLAKPVENLPSAEIQLERREAERAGAVKETPIVTPLMDFVRQKRAAKSGNQRSSSNG 648
            FLE LAKPVENLPSAEIQLE+REAER+GA K+ PI+TPLMDFVRQKRAAK G +R  SNG
Sbjct: 121  FLELLAKPVENLPSAEIQLEKREAERSGAAKDIPIITPLMDFVRQKRAAK-GPRRPLSNG 179

Query: 649  KLSRKAAGGSSGNTRSASTKRGLEKRKMSTSMYVLRDSGKNASGKDKATYILVPRREDQQ 828
            K+SR+A   S+G   SA+++RG  K+++S +MYV RD GK+++ KDK++Y LVP+++DQ 
Sbjct: 180  KVSRRAGTSSNGGPSSATSRRGSGKKRVSATMYVARDPGKSSTIKDKSSYTLVPKQDDQH 239

Query: 829  LSDKSISVSATTGHEKIDDQSAPSIDGPNGGEAQTVAPXXXXXXXXXXXEQGTTLVSRV- 1005
            L +K+ +++++ G++ +D+     + G +    + V             E+    VS + 
Sbjct: 240  LPNKASNMASSDGNQTLDEN---GVSGNHDAGKKKV-------LLLKGKEREIITVSDLD 289

Query: 1006 -VSQQQSETSHAKNFPVST-SKLNQQHEARARMIRGILSNKEARXXXXXXXXXXXXXXXL 1179
             +SQ  + TS AK    ST  K +Q+HE   R+IR ILS KE                  
Sbjct: 290  SMSQHHNVTSSAKTVVGSTVLKQSQRHEGSGRIIRSILSKKELHQSQSSRALSEQKILTS 349

Query: 1180 DLEDKXXXXXXXXXXISKDHFXXXXXXXXXXXXDMKKAPDDKVVGNGHHTTGHINEKKDK 1359
            +LE              K+                   P++K+   G H +   +E++++
Sbjct: 350  NLE--------------KEKQPPRPLHVQLILKGSNGTPENKI---GVHDSHVSSERQER 392

Query: 1360 RTRNKDRPDRGFWTPLRRSDGLHASDECXXXXXXXXXXXXXXXXEEKTIAQDVALSAVDV 1539
              R+KDRPDRG WT   R +G   S                            A S VD 
Sbjct: 393  HVRHKDRPDRGVWT--SRFNGADVS------------------------FSSPASSQVDP 426

Query: 1540 IEDIDSSNKPSFPGEKTQSLDNSTQSGRGGMSPSAYDVPLSHVEVKVDMLPNASRGGQMK 1719
            +E                          G  +   +D+P            NA R  ++K
Sbjct: 427  LE--------------------------GSQADLKHDMP------------NA-RSVEVK 447

Query: 1720 SYGSARGNFSLIENGSHRH-SRRGPSHGGKDVDNFLVPVEGKPSKRGGATSHGSHEKQVW 1896
            S+GS R + S  ENG ++H  RRGPS+G KDVD + V  EGK  +R   +++GS+EKQVW
Sbjct: 448  SFGSVRTSHS-SENGFNKHFGRRGPSYGVKDVDGYSVSSEGKHPRRSSTSAYGSNEKQVW 506

Query: 1897 VQKSGAGS 1920
            VQK+ +GS
Sbjct: 507  VQKASSGS 514


>ref|XP_006598794.1| PREDICTED: regulator of nonsense transcripts UPF3-like isoform X1
            [Glycine max] gi|571524272|ref|XP_006598795.1| PREDICTED:
            regulator of nonsense transcripts UPF3-like isoform X2
            [Glycine max]
          Length = 512

 Score =  399 bits (1024), Expect = e-108
 Identities = 261/608 (42%), Positives = 344/608 (56%), Gaps = 4/608 (0%)
 Frame = +1

Query: 109  MKDPSDRTKVVLRHLPPGISQSALVDQIDSRFSGRYRWFCFRPGKISQTYQLYSRAYIDF 288
            MK   DRTKVVLRHLPP IS++AL+ QID+ F+GRY W  FRPGKISQ +  YSRAYIDF
Sbjct: 1    MKGALDRTKVVLRHLPPSISEAALLAQIDAAFAGRYNWLSFRPGKISQKHISYSRAYIDF 60

Query: 289  NGREDVVEFAEFFDGRVFVNERGAQFKCIVEYAPSQRGPKSSSKKDGREGTISKDPEYLE 468
               EDV+ FAEFF+G VFVNE+G+QFK IVEYAPSQR P+  SKKDGR+GTI KD EYLE
Sbjct: 61   KRPEDVILFAEFFNGHVFVNEKGSQFKVIVEYAPSQRVPRQWSKKDGRDGTIYKDSEYLE 120

Query: 469  FLEFLAKPVENLPSAEIQLERREAERAGAVKETPIVTPLMDFVRQKRAAKSGNQRSSSNG 648
            FLE LAKPVENLPSAEIQLE+REAER+GA K+ PI+TPLMDFVRQKRAAK G +R  SNG
Sbjct: 121  FLELLAKPVENLPSAEIQLEKREAERSGAAKDIPIITPLMDFVRQKRAAK-GPRRLLSNG 179

Query: 649  KLSRKAAGGSSGNTRSASTKRGLEKRKMSTSMYVLRDSGKNASGKDKATYILVPRREDQQ 828
            K+S++A   S+G+  S +++RG  K+++S +MYV RD GKN++ KDK+T  LVP++ DQ 
Sbjct: 180  KVSQRAGTSSNGSPSSVTSRRGSGKKRVSATMYVARDPGKNSTIKDKST--LVPKQGDQH 237

Query: 829  LSDKSISVSATTGHEKIDDQSAPSIDGPNGGEAQTVAPXXXXXXXXXXXEQGTTLVSRV- 1005
            LSDK+ +++++  +  +D+     + G +    + V             E+    VS + 
Sbjct: 238  LSDKASNMASSDANLTLDEN---GVSGNHDAGKKKV-------LLLKGKEREIITVSDLD 287

Query: 1006 -VSQQQSETSHAKNFPVST-SKLNQQHEARARMIRGILSNKEARXXXXXXXXXXXXXXXL 1179
             +SQ  + TS AK    ST  K +Q+HE   R+IR ILS KE R                
Sbjct: 288  SMSQHHNVTSSAKMIVGSTVLKQSQRHEGSGRIIRSILSKKELRQSQYSRALSEQQIQTS 347

Query: 1180 DLEDKXXXXXXXXXXISKDHFXXXXXXXXXXXXDMKKAPDDKVVGNGHHTTGHINEKKDK 1359
            +LE              K+                   P++K+   G H +   +E++++
Sbjct: 348  NLE--------------KEKQPPRPLHVQLILKGSNGTPENKI---GVHDSHVSSERQER 390

Query: 1360 RTRNKDRPDRGFWTPLRRSDGLHASDECXXXXXXXXXXXXXXXXEEKTIAQDVALSAVDV 1539
              R+KDRPDRG WT   RS+G   S                            A S VD 
Sbjct: 391  HVRHKDRPDRGVWT--SRSNGADDS------------------------FSSSASSQVDP 424

Query: 1540 IEDIDSSNKPSFPGEKTQSLDNSTQSGRGGMSPSAYDVPLSHVEVKVDMLPNASRGGQMK 1719
            +E                          G  +   +D P            NA  G ++K
Sbjct: 425  LE--------------------------GSHADLKHDTP------------NARSG-EVK 445

Query: 1720 SYGSARGNFSLIENGSHRH-SRRGPSHGGKDVDNFLVPVEGKPSKRGGATSHGSHEKQVW 1896
            S GS R + S  ENG ++H  RRGPSHG KDVD + V  EGK  +R   +++GS+EKQVW
Sbjct: 446  SLGSVRTSHS-SENGFNKHFGRRGPSHGVKDVDGYSVSSEGKHPRRSSTSAYGSNEKQVW 504

Query: 1897 VQKSGAGS 1920
            VQK+ +G+
Sbjct: 505  VQKASSGT 512