BLASTX nr result
ID: Sinomenium22_contig00016761
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00016761
(493 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AFJ73018.1| photosystem II CP47 protein, partial (chloroplast... 94 2e-23
gb|ACD93086.1| CP47 protein [Leptopteris wilkesiana] 97 4e-22
ref|YP_003934300.1| photosystem II CP47 chlorophyll apoprotein [... 108 1e-21
gb|AAN32101.1| photosystem II CP47 protein, partial (chloroplast... 108 1e-21
gb|AEX10211.1| no product string in file [California macrophylla] 107 1e-21
gb|AFU94343.1| PsbB, partial (chloroplast) [Rhizophora mangle] 107 1e-21
gb|AEH27346.1| photosystem II cp47 protein, partial (chloroplast... 107 2e-21
gb|AEH26795.1| photosystem II cp47 protein, partial (chloroplast... 107 2e-21
ref|YP_004769837.1| photosystem II 47 kDa protein (chloroplast) ... 107 2e-21
ref|YP_002149758.1| photosystem II CP47 chlorophyll apoprotein [... 107 2e-21
gb|ABV65483.1| photosystem II CP47 chlorophyll apoprotein, parti... 107 2e-21
gb|AAN32275.1| photosystem II CP47 protein, partial (chloroplast... 107 2e-21
ref|YP_009026463.1| photosystem II 47 kDa protein (chloroplast) ... 107 2e-21
ref|YP_008081910.1| photosystem II p680 chlorophyll A apoprotein... 107 2e-21
ref|YP_008081832.1| photosystem II p680 chlorophyll A apoprotein... 107 2e-21
ref|YP_008081676.1| photosystem II p680 chlorophyll A apoprotein... 107 2e-21
ref|YP_008081598.1| photosystem II p680 chlorophyll A apoprotein... 107 2e-21
ref|YP_358606.1| photosystem II 47 kDa protein [Phalaenopsis aph... 107 2e-21
ref|YP_006503715.1| photosystem II CP47 chlorophyll apoprotein (... 107 2e-21
ref|YP_006073291.1| photosystem II 47 kDa protein (chloroplast) ... 107 2e-21
>gb|AFJ73018.1| photosystem II CP47 protein, partial (chloroplast) [Encalypta
ciliata]
Length = 498
Score = 94.4 bits (233), Expect(2) = 2e-23
Identities = 45/71 (63%), Positives = 50/71 (70%)
Frame = -2
Query: 411 GELGGVIYSDPATAKKYASCAQLGEIFQIDHTTLKFNGVFNLSSRDWFTFGHVSFALLLF 232
GEL GV ++DPAT KKYA AQLGEIF+ D TLK +GVF S R WFTFGH +FALL
Sbjct: 394 GELNGVSFNDPATVKKYARRAQLGEIFEFDRATLKSDGVFRSSPRGWFTFGHATFALLSS 453
Query: 231 F*HIWHGVTVL 199
HIWHG L
Sbjct: 454 SGHIWHGARTL 464
Score = 40.4 bits (93), Expect(2) = 2e-23
Identities = 23/38 (60%), Positives = 26/38 (68%), Gaps = 6/38 (15%)
Frame = -1
Query: 202 ARTYLCDVFAGID-----QAEFGAFQMIGDP-IRRQVV 107
ART DVFAGID Q EFGAFQ +GDP +RQ+V
Sbjct: 461 ARTLFRDVFAGIDPDLDAQVEFGAFQKLGDPTTKRQIV 498
>gb|ACD93086.1| CP47 protein [Leptopteris wilkesiana]
Length = 498
Score = 97.1 bits (240), Expect(2) = 4e-22
Identities = 46/71 (64%), Positives = 51/71 (71%)
Frame = -2
Query: 411 GELGGVIYSDPATAKKYASCAQLGEIFQIDHTTLKFNGVFNLSSRDWFTFGHVSFALLLF 232
GEL GV +SDPAT KKYA AQLGEI + D TLK +GVF S R WFTFGH +FAL+ F
Sbjct: 394 GELDGVNFSDPATVKKYARRAQLGEISEFDRATLKSDGVFRSSPRGWFTFGHATFALISF 453
Query: 231 F*HIWHGVTVL 199
F HIWHG L
Sbjct: 454 FGHIWHGARTL 464
Score = 33.1 bits (74), Expect(2) = 4e-22
Identities = 21/38 (55%), Positives = 23/38 (60%), Gaps = 6/38 (15%)
Frame = -1
Query: 202 ARTYLCDVFAGID-----QAEFGAFQMIGD-PIRRQVV 107
ART DVFAGID Q E GAFQ +GD +RQ V
Sbjct: 461 ARTLFRDVFAGIDPDSDAQVESGAFQKLGDSTTKRQTV 498
>ref|YP_003934300.1| photosystem II CP47 chlorophyll apoprotein [Monsonia speciosa]
gi|197132076|gb|ACH47556.1| photosystem II CP47
chlorophyll apoprotein [Monsonia speciosa]
gi|300069315|gb|ADJ66435.1| photosystem II CP47
chlorophyll apoprotein [Monsonia speciosa]
Length = 508
Score = 108 bits (269), Expect = 1e-21
Identities = 51/71 (71%), Positives = 54/71 (76%)
Frame = -2
Query: 411 GELGGVIYSDPATAKKYASCAQLGEIFQIDHTTLKFNGVFNLSSRDWFTFGHVSFALLLF 232
GEL GVIYSDPAT KKYA AQLGEIF++D TLK +GVF S R WFTFGH SFALL F
Sbjct: 404 GELNGVIYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFF 463
Query: 231 F*HIWHGVTVL 199
F HIWHG L
Sbjct: 464 FGHIWHGARTL 474
>gb|AAN32101.1| photosystem II CP47 protein, partial (chloroplast) [Butomus
umbellatus]
Length = 498
Score = 108 bits (269), Expect = 1e-21
Identities = 51/71 (71%), Positives = 54/71 (76%)
Frame = -2
Query: 411 GELGGVIYSDPATAKKYASCAQLGEIFQIDHTTLKFNGVFNLSSRDWFTFGHVSFALLLF 232
GEL GVIYSDPAT KKYA AQLGEIF++D TLK +GVF S R WFTFGH SFALL F
Sbjct: 394 GELNGVIYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFF 453
Query: 231 F*HIWHGVTVL 199
F HIWHG L
Sbjct: 454 FGHIWHGARTL 464
>gb|AEX10211.1| no product string in file [California macrophylla]
Length = 508
Score = 107 bits (268), Expect = 1e-21
Identities = 51/71 (71%), Positives = 54/71 (76%)
Frame = -2
Query: 411 GELGGVIYSDPATAKKYASCAQLGEIFQIDHTTLKFNGVFNLSSRDWFTFGHVSFALLLF 232
GEL GVIYSDPAT KKYA AQLGEIF++D LK +GVF S R WFTFGHVSFALL F
Sbjct: 404 GELNGVIYSDPATVKKYARRAQLGEIFELDRAALKSDGVFRSSPRGWFTFGHVSFALLFF 463
Query: 231 F*HIWHGVTVL 199
F HIWHG L
Sbjct: 464 FGHIWHGARTL 474
>gb|AFU94343.1| PsbB, partial (chloroplast) [Rhizophora mangle]
Length = 508
Score = 107 bits (268), Expect = 1e-21
Identities = 50/71 (70%), Positives = 54/71 (76%)
Frame = -2
Query: 411 GELGGVIYSDPATAKKYASCAQLGEIFQIDHTTLKFNGVFNLSSRDWFTFGHVSFALLLF 232
GEL G+IYSDPAT KKYA AQLGEIF++D TLK +GVF S R WFTFGH SFALL F
Sbjct: 404 GELNGIIYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFF 463
Query: 231 F*HIWHGVTVL 199
F HIWHG L
Sbjct: 464 FGHIWHGARTL 474
>gb|AEH27346.1| photosystem II cp47 protein, partial (chloroplast) [Garrya
elliptica]
Length = 503
Score = 107 bits (267), Expect = 2e-21
Identities = 51/71 (71%), Positives = 54/71 (76%)
Frame = -2
Query: 411 GELGGVIYSDPATAKKYASCAQLGEIFQIDHTTLKFNGVFNLSSRDWFTFGHVSFALLLF 232
GEL GV YSDPAT KKYA AQLGEIF++D TLK +GVF S R WFTFGHVSFALL F
Sbjct: 399 GELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHVSFALLFF 458
Query: 231 F*HIWHGVTVL 199
F HIWHG L
Sbjct: 459 FGHIWHGARTL 469
>gb|AEH26795.1| photosystem II cp47 protein, partial (chloroplast) [Gentiana
procera]
Length = 503
Score = 107 bits (267), Expect = 2e-21
Identities = 51/71 (71%), Positives = 54/71 (76%)
Frame = -2
Query: 411 GELGGVIYSDPATAKKYASCAQLGEIFQIDHTTLKFNGVFNLSSRDWFTFGHVSFALLLF 232
GEL GV YSDPAT KKYA AQLGEIF++D TLK +GVF S R WFTFGHVSFALL F
Sbjct: 399 GELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHVSFALLFF 458
Query: 231 F*HIWHGVTVL 199
F HIWHG L
Sbjct: 459 FGHIWHGARTL 469
>ref|YP_004769837.1| photosystem II 47 kDa protein (chloroplast) [Wolffiella lingulata]
gi|341834180|gb|AEK94450.1| photosystem II 47 kDa
protein [Wolffiella lingulata]
Length = 508
Score = 107 bits (267), Expect = 2e-21
Identities = 51/71 (71%), Positives = 54/71 (76%)
Frame = -2
Query: 411 GELGGVIYSDPATAKKYASCAQLGEIFQIDHTTLKFNGVFNLSSRDWFTFGHVSFALLLF 232
GEL GV YSDPAT KKYA AQLGEIF++D TLK +GVF S R WFTFGHVSFALL F
Sbjct: 404 GELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHVSFALLFF 463
Query: 231 F*HIWHGVTVL 199
F HIWHG L
Sbjct: 464 FGHIWHGARTL 474
>ref|YP_002149758.1| photosystem II CP47 chlorophyll apoprotein [Cicer arietinum]
gi|221272369|sp|B5LMP9.1|PSBB_CICAR RecName:
Full=Photosystem II CP47 chlorophyll apoprotein;
AltName: Full=PSII 47 kDa protein; AltName: Full=Protein
CP-47 gi|197089825|gb|ACH41095.1| photosystem II CP47
chlorophyll apoprotein [Cicer arietinum]
Length = 509
Score = 107 bits (267), Expect = 2e-21
Identities = 51/71 (71%), Positives = 54/71 (76%)
Frame = -2
Query: 411 GELGGVIYSDPATAKKYASCAQLGEIFQIDHTTLKFNGVFNLSSRDWFTFGHVSFALLLF 232
GEL GV YSDPAT KKYA AQLGEIF++D TLK +GVF S R WFTFGHVSFALL F
Sbjct: 404 GELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHVSFALLFF 463
Query: 231 F*HIWHGVTVL 199
F HIWHG L
Sbjct: 464 FGHIWHGARTL 474
>gb|ABV65483.1| photosystem II CP47 chlorophyll apoprotein, partial (chloroplast)
[Floerkea proserpinacoides]
Length = 478
Score = 107 bits (267), Expect = 2e-21
Identities = 51/71 (71%), Positives = 54/71 (76%)
Frame = -2
Query: 411 GELGGVIYSDPATAKKYASCAQLGEIFQIDHTTLKFNGVFNLSSRDWFTFGHVSFALLLF 232
GEL GV YSDPAT KKYA AQLGEIF++D TLK +GVF S R WFTFGHVSFALL F
Sbjct: 374 GELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHVSFALLFF 433
Query: 231 F*HIWHGVTVL 199
F HIWHG L
Sbjct: 434 FGHIWHGARTL 444
>gb|AAN32275.1| photosystem II CP47 protein, partial (chloroplast) [Leopoldia
comosa]
Length = 498
Score = 107 bits (267), Expect = 2e-21
Identities = 51/71 (71%), Positives = 54/71 (76%)
Frame = -2
Query: 411 GELGGVIYSDPATAKKYASCAQLGEIFQIDHTTLKFNGVFNLSSRDWFTFGHVSFALLLF 232
GEL GV YSDPAT KKYA AQLGEIF++D TLK +GVF S R WFTFGHVSFALL F
Sbjct: 394 GELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHVSFALLFF 453
Query: 231 F*HIWHGVTVL 199
F HIWHG L
Sbjct: 454 FGHIWHGARTL 464
>ref|YP_009026463.1| photosystem II 47 kDa protein (chloroplast) [Dendrobium officinale]
gi|507474345|gb|AGM48221.1| photosystem II 47 kDa
protein (chloroplast) [Dendrobium officinale]
Length = 508
Score = 107 bits (266), Expect = 2e-21
Identities = 50/71 (70%), Positives = 54/71 (76%)
Frame = -2
Query: 411 GELGGVIYSDPATAKKYASCAQLGEIFQIDHTTLKFNGVFNLSSRDWFTFGHVSFALLLF 232
GEL GVIYSDPAT KKYA AQLGEIF++D TLK +GVF S R WFTFGH +FALL F
Sbjct: 404 GELNGVIYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFF 463
Query: 231 F*HIWHGVTVL 199
F HIWHG L
Sbjct: 464 FGHIWHGARTL 474
>ref|YP_008081910.1| photosystem II p680 chlorophyll A apoprotein (chloroplast)
[Cymbidium mannii] gi|482662572|gb|AGK25794.1|
photosystem II p680 chlorophyll A apoprotein
(chloroplast) [Cymbidium mannii]
Length = 508
Score = 107 bits (266), Expect = 2e-21
Identities = 50/71 (70%), Positives = 54/71 (76%)
Frame = -2
Query: 411 GELGGVIYSDPATAKKYASCAQLGEIFQIDHTTLKFNGVFNLSSRDWFTFGHVSFALLLF 232
GEL GVIYSDPAT KKYA AQLGEIF++D TLK +GVF S R WFTFGH +FALL F
Sbjct: 404 GELNGVIYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFF 463
Query: 231 F*HIWHGVTVL 199
F HIWHG L
Sbjct: 464 FGHIWHGARTL 474
>ref|YP_008081832.1| photosystem II p680 chlorophyll A apoprotein (chloroplast)
[Cymbidium tracyanum] gi|482662414|gb|AGK25638.1|
photosystem II p680 chlorophyll A apoprotein
(chloroplast) [Cymbidium tracyanum]
Length = 508
Score = 107 bits (266), Expect = 2e-21
Identities = 50/71 (70%), Positives = 54/71 (76%)
Frame = -2
Query: 411 GELGGVIYSDPATAKKYASCAQLGEIFQIDHTTLKFNGVFNLSSRDWFTFGHVSFALLLF 232
GEL GVIYSDPAT KKYA AQLGEIF++D TLK +GVF S R WFTFGH +FALL F
Sbjct: 404 GELNGVIYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFF 463
Query: 231 F*HIWHGVTVL 199
F HIWHG L
Sbjct: 464 FGHIWHGARTL 474
>ref|YP_008081676.1| photosystem II p680 chlorophyll A apoprotein (chloroplast)
[Cymbidium sinense] gi|512721409|ref|YP_008081754.1|
photosystem II p680 chlorophyll A apoprotein
(chloroplast) [Cymbidium tortisepalum]
gi|482662098|gb|AGK25326.1| photosystem II p680
chlorophyll A apoprotein (chloroplast) [Cymbidium
sinense] gi|482662177|gb|AGK25404.1| photosystem II p680
chlorophyll A apoprotein (chloroplast) [Cymbidium
tortisepalum] gi|482662256|gb|AGK25482.1| photosystem II
p680 chlorophyll A apoprotein (chloroplast) [Cymbidium
tortisepalum] gi|482662335|gb|AGK25560.1| photosystem II
p680 chlorophyll A apoprotein (chloroplast) [Cymbidium
mannii] gi|482662493|gb|AGK25716.1| photosystem II p680
chlorophyll A apoprotein (chloroplast) [Cymbidium
tortisepalum]
Length = 508
Score = 107 bits (266), Expect = 2e-21
Identities = 50/71 (70%), Positives = 54/71 (76%)
Frame = -2
Query: 411 GELGGVIYSDPATAKKYASCAQLGEIFQIDHTTLKFNGVFNLSSRDWFTFGHVSFALLLF 232
GEL GVIYSDPAT KKYA AQLGEIF++D TLK +GVF S R WFTFGH +FALL F
Sbjct: 404 GELNGVIYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFF 463
Query: 231 F*HIWHGVTVL 199
F HIWHG L
Sbjct: 464 FGHIWHGARTL 474
>ref|YP_008081598.1| photosystem II p680 chlorophyll A apoprotein (chloroplast)
[Cymbidium aloifolium] gi|482662019|gb|AGK25248.1|
photosystem II p680 chlorophyll A apoprotein
(chloroplast) [Cymbidium aloifolium]
Length = 508
Score = 107 bits (266), Expect = 2e-21
Identities = 50/71 (70%), Positives = 54/71 (76%)
Frame = -2
Query: 411 GELGGVIYSDPATAKKYASCAQLGEIFQIDHTTLKFNGVFNLSSRDWFTFGHVSFALLLF 232
GEL GVIYSDPAT KKYA AQLGEIF++D TLK +GVF S R WFTFGH +FALL F
Sbjct: 404 GELNGVIYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFF 463
Query: 231 F*HIWHGVTVL 199
F HIWHG L
Sbjct: 464 FGHIWHGARTL 474
>ref|YP_358606.1| photosystem II 47 kDa protein [Phalaenopsis aphrodite subsp.
formosana] gi|122213417|sp|Q3BAL2.1|PSBB_PHAAO RecName:
Full=Photosystem II CP47 chlorophyll apoprotein;
AltName: Full=PSII 47 kDa protein; AltName: Full=Protein
CP-47 gi|58802805|gb|AAW82525.1| photosystem II 47 kDa
protein [Phalaenopsis aphrodite subsp. formosana]
Length = 508
Score = 107 bits (266), Expect = 2e-21
Identities = 50/71 (70%), Positives = 54/71 (76%)
Frame = -2
Query: 411 GELGGVIYSDPATAKKYASCAQLGEIFQIDHTTLKFNGVFNLSSRDWFTFGHVSFALLLF 232
GEL GVIYSDPAT KKYA AQLGEIF++D TLK +GVF S R WFTFGH +FALL F
Sbjct: 404 GELNGVIYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFF 463
Query: 231 F*HIWHGVTVL 199
F HIWHG L
Sbjct: 464 FGHIWHGARTL 474
>ref|YP_006503715.1| photosystem II CP47 chlorophyll apoprotein (chloroplast) [Erycina
pusilla] gi|339431327|gb|AEJ72521.1| photosystem II CP47
chlorophyll apoprotein (chloroplast) [Erycina pusilla]
Length = 508
Score = 107 bits (266), Expect = 2e-21
Identities = 50/71 (70%), Positives = 54/71 (76%)
Frame = -2
Query: 411 GELGGVIYSDPATAKKYASCAQLGEIFQIDHTTLKFNGVFNLSSRDWFTFGHVSFALLLF 232
GEL GVIYSDPAT KKYA AQLGEIF++D TLK +GVF S R WFTFGH +FALL F
Sbjct: 404 GELNGVIYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFF 463
Query: 231 F*HIWHGVTVL 199
F HIWHG L
Sbjct: 464 FGHIWHGARTL 474
>ref|YP_006073291.1| photosystem II 47 kDa protein (chloroplast) [Phalaenopsis
equestris] gi|329668837|gb|AEB96284.1| photosystem II 47
kDa protein (chloroplast) [Phalaenopsis equestris]
Length = 508
Score = 107 bits (266), Expect = 2e-21
Identities = 50/71 (70%), Positives = 54/71 (76%)
Frame = -2
Query: 411 GELGGVIYSDPATAKKYASCAQLGEIFQIDHTTLKFNGVFNLSSRDWFTFGHVSFALLLF 232
GEL GVIYSDPAT KKYA AQLGEIF++D TLK +GVF S R WFTFGH +FALL F
Sbjct: 404 GELNGVIYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFF 463
Query: 231 F*HIWHGVTVL 199
F HIWHG L
Sbjct: 464 FGHIWHGARTL 474