BLASTX nr result
ID: Sinomenium22_contig00016616
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00016616
(538 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 316 3e-84
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 316 3e-84
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 314 7e-84
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 313 2e-83
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 310 2e-82
gb|ABF81447.1| NBS type disease resistance protein [Populus tric... 284 8e-75
gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157... 278 6e-73
ref|XP_006575887.1| PREDICTED: uncharacterized mitochondrial pro... 256 2e-66
gb|AGW47867.1| polyprotein [Phaseolus vulgaris] 254 1e-65
ref|XP_006605051.1| PREDICTED: uncharacterized mitochondrial pro... 252 3e-65
emb|CAB42059.1| Tpv2-1c [Phaseolus vulgaris] 250 2e-64
ref|XP_006582593.1| PREDICTED: uncharacterized mitochondrial pro... 249 2e-64
gb|AGH20668.1| reverse transcriptase, partial [Arabis hirsuta] 232 4e-59
emb|CAB75469.1| copia-type reverse transcriptase-like protein [A... 231 1e-58
gb|AGH20675.1| reverse transcriptase, partial [Olimarabidopsis c... 228 7e-58
gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus] 227 1e-57
gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halle... 227 2e-57
gb|AFK88550.1| reverse transcriptase, partial [Arabidopsis halle... 227 2e-57
gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halle... 227 2e-57
emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera] 227 2e-57
>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
Length = 1352
Score = 316 bits (809), Expect = 3e-84
Identities = 148/178 (83%), Positives = 165/178 (92%)
Frame = -3
Query: 536 CLYVDDLIFTGNNPSMFEDFKTVMTNEFEMTDIGLMTYYLGIEVKQKEDGIFISQEGYAK 357
CLYVDDLIFTGNNPSMFE+FK MT EFEMTDIGLM+YYLGIEVKQ+++GIFI+QEGYAK
Sbjct: 1029 CLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAK 1088
Query: 356 EILKKFKMDDCNPVGTPVECGVKLSKHEEGQSVDPTFFKSLVGSLRYLTCTRPDILYAVG 177
E+LKKFKMDD NPV TP+ECG+KLSK EEG+ VDPT FKSLVGSLRYLTCTRPDILYAVG
Sbjct: 1089 EVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVG 1148
Query: 176 LVSRYMETPTTTHLKAAKRILRYIKGTINFGMFYSSSNDYNLVGYSDSDWAGDIDDRK 3
+VSRYME PTTTH KAAKRILRYIKGT+NFG+ YS+++DY LVGYSDSDW GD+DDRK
Sbjct: 1149 VVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRK 1206
>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
polyprotein, putative [Arabidopsis thaliana]
Length = 1320
Score = 316 bits (809), Expect = 3e-84
Identities = 148/178 (83%), Positives = 165/178 (92%)
Frame = -3
Query: 536 CLYVDDLIFTGNNPSMFEDFKTVMTNEFEMTDIGLMTYYLGIEVKQKEDGIFISQEGYAK 357
CLYVDDLIFTGNNPSMFE+FK MT EFEMTDIGLM+YYLGIEVKQ+++GIFI+QEGYAK
Sbjct: 997 CLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAK 1056
Query: 356 EILKKFKMDDCNPVGTPVECGVKLSKHEEGQSVDPTFFKSLVGSLRYLTCTRPDILYAVG 177
E+LKKFKMDD NPV TP+ECG+KLSK EEG+ VDPT FKSLVGSLRYLTCTRPDILYAVG
Sbjct: 1057 EVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVG 1116
Query: 176 LVSRYMETPTTTHLKAAKRILRYIKGTINFGMFYSSSNDYNLVGYSDSDWAGDIDDRK 3
+VSRYME PTTTH KAAKRILRYIKGT+NFG+ YS+++DY LVGYSDSDW GD+DDRK
Sbjct: 1117 VVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRK 1174
>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
Length = 1352
Score = 314 bits (805), Expect = 7e-84
Identities = 147/178 (82%), Positives = 165/178 (92%)
Frame = -3
Query: 536 CLYVDDLIFTGNNPSMFEDFKTVMTNEFEMTDIGLMTYYLGIEVKQKEDGIFISQEGYAK 357
CLYVDDLIFTGNNPS+FE+FK MT EFEMTDIGLM+YYLGIEVKQ+++GIFI+QEGYAK
Sbjct: 1029 CLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAK 1088
Query: 356 EILKKFKMDDCNPVGTPVECGVKLSKHEEGQSVDPTFFKSLVGSLRYLTCTRPDILYAVG 177
E+LKKFKMDD NPV TP+ECG+KLSK EEG+ VDPT FKSLVGSLRYLTCTRPDILYAVG
Sbjct: 1089 EVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVG 1148
Query: 176 LVSRYMETPTTTHLKAAKRILRYIKGTINFGMFYSSSNDYNLVGYSDSDWAGDIDDRK 3
+VSRYME PTTTH KAAKRILRYIKGT+NFG+ YS+++DY LVGYSDSDW GD+DDRK
Sbjct: 1149 VVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRK 1206
>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
Length = 1352
Score = 313 bits (801), Expect = 2e-83
Identities = 146/178 (82%), Positives = 165/178 (92%)
Frame = -3
Query: 536 CLYVDDLIFTGNNPSMFEDFKTVMTNEFEMTDIGLMTYYLGIEVKQKEDGIFISQEGYAK 357
CLYVDDLIFTGNNPS+FE+FK MT EFEMTDIGLM+YYLGIEVKQ+++GIFI+QEGYAK
Sbjct: 1029 CLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAK 1088
Query: 356 EILKKFKMDDCNPVGTPVECGVKLSKHEEGQSVDPTFFKSLVGSLRYLTCTRPDILYAVG 177
E+LKKFK+DD NPV TP+ECG+KLSK EEG+ VDPT FKSLVGSLRYLTCTRPDILYAVG
Sbjct: 1089 EVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVG 1148
Query: 176 LVSRYMETPTTTHLKAAKRILRYIKGTINFGMFYSSSNDYNLVGYSDSDWAGDIDDRK 3
+VSRYME PTTTH KAAKRILRYIKGT+NFG+ YS+++DY LVGYSDSDW GD+DDRK
Sbjct: 1149 VVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRK 1206
>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
Length = 1291
Score = 310 bits (793), Expect = 2e-82
Identities = 146/178 (82%), Positives = 163/178 (91%)
Frame = -3
Query: 536 CLYVDDLIFTGNNPSMFEDFKTVMTNEFEMTDIGLMTYYLGIEVKQKEDGIFISQEGYAK 357
CLYVDDLIFTGNNPSMFE+FK MT EFEMTDIGLM+YYLGIEVKQ+++ IFI+QEGYAK
Sbjct: 968 CLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNRIFITQEGYAK 1027
Query: 356 EILKKFKMDDCNPVGTPVECGVKLSKHEEGQSVDPTFFKSLVGSLRYLTCTRPDILYAVG 177
E+LKKFKMDD NPV TP+ECG+KLSK EEG+ VDPT FKSLVGSLRYLTCTRPDILYAVG
Sbjct: 1028 EVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVG 1087
Query: 176 LVSRYMETPTTTHLKAAKRILRYIKGTINFGMFYSSSNDYNLVGYSDSDWAGDIDDRK 3
+VSRYME PTTTH KAAKRILRYIKGT+NFG+ YS+++DY LVGYSDSDW D+DDRK
Sbjct: 1088 VVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGRDVDDRK 1145
>gb|ABF81447.1| NBS type disease resistance protein [Populus trichocarpa]
Length = 972
Score = 284 bits (727), Expect = 8e-75
Identities = 135/178 (75%), Positives = 158/178 (88%)
Frame = -3
Query: 536 CLYVDDLIFTGNNPSMFEDFKTVMTNEFEMTDIGLMTYYLGIEVKQKEDGIFISQEGYAK 357
CLYVDDLIFTGNNP+MF+DFK M +EFEMTDIGLM+++LG+EV QKE+GIF+SQ GYAK
Sbjct: 177 CLYVDDLIFTGNNPTMFDDFKQNMVHEFEMTDIGLMSHFLGLEVTQKEEGIFVSQSGYAK 236
Query: 356 EILKKFKMDDCNPVGTPVECGVKLSKHEEGQSVDPTFFKSLVGSLRYLTCTRPDILYAVG 177
+IL++FKM+ CNPV TPVE GV+L K + G +VDPT+FKSLVGSLRYLTCTRPDILY VG
Sbjct: 237 DILERFKMESCNPVSTPVENGVELRKSKVG-NVDPTYFKSLVGSLRYLTCTRPDILYGVG 295
Query: 176 LVSRYMETPTTTHLKAAKRILRYIKGTINFGMFYSSSNDYNLVGYSDSDWAGDIDDRK 3
LVSRYMETP +HL AAKRILRYIKGT+N GMFY+SS D+NLVGYSDSDW D+D+RK
Sbjct: 296 LVSRYMETPDQSHLNAAKRILRYIKGTMNEGMFYTSSKDFNLVGYSDSDWGRDLDERK 353
>gb|ACN78973.1| copia-type polyprotein [Glycine max] gi|225016157|gb|ACN78980.1|
copia-type polyprotein [Glycine max]
Length = 1042
Score = 278 bits (711), Expect = 6e-73
Identities = 131/178 (73%), Positives = 156/178 (87%)
Frame = -3
Query: 536 CLYVDDLIFTGNNPSMFEDFKTVMTNEFEMTDIGLMTYYLGIEVKQKEDGIFISQEGYAK 357
CLYVDDLIFTGNNP++FEDFK M+ EF+MTD+GLM+YYLG+EVKQ ++GIF+SQE Y K
Sbjct: 720 CLYVDDLIFTGNNPNLFEDFKESMSREFDMTDMGLMSYYLGMEVKQTQNGIFVSQERYTK 779
Query: 356 EILKKFKMDDCNPVGTPVECGVKLSKHEEGQSVDPTFFKSLVGSLRYLTCTRPDILYAVG 177
E+LKKF M DCNPV TP+E G+KLSK +EG+ VD T FKSLVGSLRYLT TRPDILYAVG
Sbjct: 780 EVLKKFNMLDCNPVNTPMEGGLKLSKFDEGEKVDSTIFKSLVGSLRYLTNTRPDILYAVG 839
Query: 176 LVSRYMETPTTTHLKAAKRILRYIKGTINFGMFYSSSNDYNLVGYSDSDWAGDIDDRK 3
+V R+ME PT+ HLKAAKRIL Y+KGTI+FG+FYS SN+Y LVG+ DSD+AGD+DDRK
Sbjct: 840 VVCRFMEAPTSPHLKAAKRILCYLKGTIDFGLFYSPSNNYKLVGFCDSDFAGDVDDRK 897
>ref|XP_006575887.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Glycine max]
Length = 174
Score = 256 bits (654), Expect = 2e-66
Identities = 118/146 (80%), Positives = 135/146 (92%)
Frame = -3
Query: 440 IGLMTYYLGIEVKQKEDGIFISQEGYAKEILKKFKMDDCNPVGTPVECGVKLSKHEEGQS 261
+GLM YYLGIEVKQ++ GIFI+QEGYAKE+LKKFKMDD NPVGTP+ECG KLSKHE+G++
Sbjct: 1 MGLMAYYLGIEVKQEDKGIFITQEGYAKEVLKKFKMDDANPVGTPMECGSKLSKHEKGEN 60
Query: 260 VDPTFFKSLVGSLRYLTCTRPDILYAVGLVSRYMETPTTTHLKAAKRILRYIKGTINFGM 81
VDPT +KSLVGSLRYLTCTRPDILY VG+VSRYME PTTTH KAAKRILRYIKGT NFG+
Sbjct: 61 VDPTLYKSLVGSLRYLTCTRPDILYVVGVVSRYMEAPTTTHFKAAKRILRYIKGTTNFGL 120
Query: 80 FYSSSNDYNLVGYSDSDWAGDIDDRK 3
Y SS++YN+VGYSDSDW+GD+DDRK
Sbjct: 121 HYYSSDNYNIVGYSDSDWSGDLDDRK 146
>gb|AGW47867.1| polyprotein [Phaseolus vulgaris]
Length = 1471
Score = 254 bits (648), Expect = 1e-65
Identities = 117/177 (66%), Positives = 145/177 (81%)
Frame = -3
Query: 533 LYVDDLIFTGNNPSMFEDFKTVMTNEFEMTDIGLMTYYLGIEVKQKEDGIFISQEGYAKE 354
LYVDDLIF GNN M E+FK M EFEMTD+GLM ++LG+EV+QKE GIF+SQE YAKE
Sbjct: 1029 LYVDDLIFMGNNNDMIEEFKGTMRREFEMTDLGLMKFFLGLEVRQKETGIFVSQEKYAKE 1088
Query: 353 ILKKFKMDDCNPVGTPVECGVKLSKHEEGQSVDPTFFKSLVGSLRYLTCTRPDILYAVGL 174
ILKK+KM++CNPV P+E G KLSK + G+ VD + ++SLVGSLRYLTCTRPD+ +VG+
Sbjct: 1089 ILKKYKMENCNPVSIPMEPGAKLSKFDGGERVDASRYRSLVGSLRYLTCTRPDLSLSVGI 1148
Query: 173 VSRYMETPTTTHLKAAKRILRYIKGTINFGMFYSSSNDYNLVGYSDSDWAGDIDDRK 3
+SR+ME P +H KA KR+LRYI+GT++ G+FYS + DY LVGYSDSDW GDIDDRK
Sbjct: 1149 ISRFMEEPVYSHWKALKRVLRYIQGTVSLGLFYSKAEDYKLVGYSDSDWCGDIDDRK 1205
>ref|XP_006605051.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Glycine max]
Length = 161
Score = 252 bits (644), Expect = 3e-65
Identities = 114/146 (78%), Positives = 135/146 (92%)
Frame = -3
Query: 440 IGLMTYYLGIEVKQKEDGIFISQEGYAKEILKKFKMDDCNPVGTPVECGVKLSKHEEGQS 261
+GLM YYLGIEVKQ++ GIFI+QEGYAKE+LKKFKMDD NPVGTP+ECG KLSKHE+G++
Sbjct: 1 MGLMAYYLGIEVKQEDKGIFITQEGYAKEVLKKFKMDDANPVGTPMECGSKLSKHEKGEN 60
Query: 260 VDPTFFKSLVGSLRYLTCTRPDILYAVGLVSRYMETPTTTHLKAAKRILRYIKGTINFGM 81
+DPT +KSL+GSLRYLTCTRPDILY VG+VSRYME PTTTH KAAKRILRYIKGT NFG+
Sbjct: 61 MDPTLYKSLIGSLRYLTCTRPDILYVVGVVSRYMEAPTTTHFKAAKRILRYIKGTTNFGL 120
Query: 80 FYSSSNDYNLVGYSDSDWAGDIDDRK 3
Y SS++Y+++GYSDSDW+GD+DDRK
Sbjct: 121 HYYSSDNYDIIGYSDSDWSGDLDDRK 146
>emb|CAB42059.1| Tpv2-1c [Phaseolus vulgaris]
Length = 374
Score = 250 bits (638), Expect = 2e-64
Identities = 116/177 (65%), Positives = 143/177 (80%)
Frame = -3
Query: 533 LYVDDLIFTGNNPSMFEDFKTVMTNEFEMTDIGLMTYYLGIEVKQKEDGIFISQEGYAKE 354
LYVDDLIF GNN M E+FK M EFEMTD+GLM ++LG+EV+QKE GIF+SQE YAKE
Sbjct: 58 LYVDDLIFMGNNNDMIEEFKGTMRREFEMTDLGLMKFFLGLEVRQKETGIFVSQEKYAKE 117
Query: 353 ILKKFKMDDCNPVGTPVECGVKLSKHEEGQSVDPTFFKSLVGSLRYLTCTRPDILYAVGL 174
ILKK+KM++CNPV P+E G KLSK + G+ VD + ++SLVGSLRYLTCTRPD+ +VG
Sbjct: 118 ILKKYKMENCNPVSIPMEPGAKLSKFDGGERVDASRYRSLVGSLRYLTCTRPDLSLSVGT 177
Query: 173 VSRYMETPTTTHLKAAKRILRYIKGTINFGMFYSSSNDYNLVGYSDSDWAGDIDDRK 3
+SR+ME P +H KA KR+LRYI+GT++ G+FYS + DY LVGYSDSDW GDIDD K
Sbjct: 178 ISRFMEEPVYSHWKALKRVLRYIQGTVSLGLFYSKAEDYKLVGYSDSDWCGDIDDPK 234
>ref|XP_006582593.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
[Glycine max]
Length = 179
Score = 249 bits (637), Expect = 2e-64
Identities = 117/149 (78%), Positives = 135/149 (90%)
Frame = -3
Query: 491 MFEDFKTVMTNEFEMTDIGLMTYYLGIEVKQKEDGIFISQEGYAKEILKKFKMDDCNPVG 312
MFE+FK M+NEFEMTD+GLM YYLGIEVKQ++ GIFI+QEGYAKE+LKKFKMDD NPVG
Sbjct: 1 MFEEFKKDMSNEFEMTDMGLMAYYLGIEVKQEDKGIFITQEGYAKEVLKKFKMDDANPVG 60
Query: 311 TPVECGVKLSKHEEGQSVDPTFFKSLVGSLRYLTCTRPDILYAVGLVSRYMETPTTTHLK 132
TP+ECG KLSKHE+G++VDPT +KSLVGSLRYLTCTRPDILY VG+VSRYME PTTTH K
Sbjct: 61 TPMECGNKLSKHEKGENVDPTLYKSLVGSLRYLTCTRPDILYVVGVVSRYMEAPTTTHFK 120
Query: 131 AAKRILRYIKGTINFGMFYSSSNDYNLVG 45
A KRILRYIKGT NFG+ Y SS++Y++VG
Sbjct: 121 AEKRILRYIKGTTNFGLHYYSSDNYDIVG 149
>gb|AGH20668.1| reverse transcriptase, partial [Arabis hirsuta]
Length = 315
Score = 232 bits (592), Expect = 4e-59
Identities = 109/126 (86%), Positives = 119/126 (94%)
Frame = -3
Query: 536 CLYVDDLIFTGNNPSMFEDFKTVMTNEFEMTDIGLMTYYLGIEVKQKEDGIFISQEGYAK 357
CLYVDDLIFTGNNPSMFE+FK +MT EFEMTDIGLM+YYLGIEVKQ+++GIFI+QEGYAK
Sbjct: 190 CLYVDDLIFTGNNPSMFEEFKMMMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAK 249
Query: 356 EILKKFKMDDCNPVGTPVECGVKLSKHEEGQSVDPTFFKSLVGSLRYLTCTRPDILYAVG 177
EILKKFKMDD NPV TP+ECG KLSKHEEG+ VDPT FKSLVGSLRYLTCTRPDILYAVG
Sbjct: 250 EILKKFKMDDSNPVSTPIECGAKLSKHEEGEGVDPTLFKSLVGSLRYLTCTRPDILYAVG 309
Query: 176 LVSRYM 159
+VSRYM
Sbjct: 310 VVSRYM 315
>emb|CAB75469.1| copia-type reverse transcriptase-like protein [Arabidopsis thaliana]
Length = 1272
Score = 231 bits (588), Expect = 1e-58
Identities = 116/163 (71%), Positives = 129/163 (79%)
Frame = -3
Query: 536 CLYVDDLIFTGNNPSMFEDFKTVMTNEFEMTDIGLMTYYLGIEVKQKEDGIFISQEGYAK 357
CLYVDDLIFTGNNPSMFE+FK MT EFEMTDIGLM+YYLGIEVKQ+++GIFI+QEGYAK
Sbjct: 1029 CLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAK 1088
Query: 356 EILKKFKMDDCNPVGTPVECGVKLSKHEEGQSVDPTFFKSLVGSLRYLTCTRPDILYAVG 177
E+LKKFKMDD NP SLVGSLRYLTCTRPDILYAVG
Sbjct: 1089 EVLKKFKMDDSNP--------------------------SLVGSLRYLTCTRPDILYAVG 1122
Query: 176 LVSRYMETPTTTHLKAAKRILRYIKGTINFGMFYSSSNDYNLV 48
+VSRYME PTTTH KAAKRILRYIKGT+NFG+ YS+++DY LV
Sbjct: 1123 VVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLV 1165
>gb|AGH20675.1| reverse transcriptase, partial [Olimarabidopsis cabulica]
Length = 315
Score = 228 bits (581), Expect = 7e-58
Identities = 106/126 (84%), Positives = 118/126 (93%)
Frame = -3
Query: 536 CLYVDDLIFTGNNPSMFEDFKTVMTNEFEMTDIGLMTYYLGIEVKQKEDGIFISQEGYAK 357
CLY+DDLIFT NNP+MFEDFK MT EFEMTDIGLM+YYLGIEVKQ+++GIFI+QEGYAK
Sbjct: 190 CLYIDDLIFTNNNPNMFEDFKQEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAK 249
Query: 356 EILKKFKMDDCNPVGTPVECGVKLSKHEEGQSVDPTFFKSLVGSLRYLTCTRPDILYAVG 177
E+LKKFKMDD NPV TP+ECG KLSKHEEG+S+DPT FKSLVGSLRYLTCTRPDILYAVG
Sbjct: 250 EVLKKFKMDDSNPVSTPMECGSKLSKHEEGESIDPTLFKSLVGSLRYLTCTRPDILYAVG 309
Query: 176 LVSRYM 159
+VSRYM
Sbjct: 310 VVSRYM 315
>gb|AGH20679.1| reverse transcriptase, partial [Raphanus sativus]
Length = 315
Score = 227 bits (579), Expect = 1e-57
Identities = 109/126 (86%), Positives = 118/126 (93%)
Frame = -3
Query: 536 CLYVDDLIFTGNNPSMFEDFKTVMTNEFEMTDIGLMTYYLGIEVKQKEDGIFISQEGYAK 357
CLYVDDLIFTGNNP MFEDFK MT EFEMTDIGLM+YYLGIEVKQ+E+GIFI+QEGYAK
Sbjct: 190 CLYVDDLIFTGNNPIMFEDFKKEMTKEFEMTDIGLMSYYLGIEVKQEENGIFITQEGYAK 249
Query: 356 EILKKFKMDDCNPVGTPVECGVKLSKHEEGQSVDPTFFKSLVGSLRYLTCTRPDILYAVG 177
E+LKKFKMDD NPV TP+ECGVKLSK EEG+SVDPT FKSLVGSLRYLTCTRPDIL+AVG
Sbjct: 250 EVLKKFKMDDSNPVCTPMECGVKLSKEEEGESVDPTLFKSLVGSLRYLTCTRPDILHAVG 309
Query: 176 LVSRYM 159
+VSRYM
Sbjct: 310 VVSRYM 315
>gb|AFK88553.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 227 bits (578), Expect = 2e-57
Identities = 107/126 (84%), Positives = 119/126 (94%)
Frame = -3
Query: 536 CLYVDDLIFTGNNPSMFEDFKTVMTNEFEMTDIGLMTYYLGIEVKQKEDGIFISQEGYAK 357
CLYVDDLIFTGNNPSMFE+FK MT EFEMTDIGLM+YYLGIEVKQ+++GIFISQEGYAK
Sbjct: 190 CLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFISQEGYAK 249
Query: 356 EILKKFKMDDCNPVGTPVECGVKLSKHEEGQSVDPTFFKSLVGSLRYLTCTRPDILYAVG 177
E+LKKFKMDD NPV TP+ECG+KLSK+EEG+ VDPT FKSLVGSLRYLTCT+PDILYAVG
Sbjct: 250 EVLKKFKMDDSNPVTTPMECGIKLSKNEEGEGVDPTTFKSLVGSLRYLTCTKPDILYAVG 309
Query: 176 LVSRYM 159
+VSRYM
Sbjct: 310 VVSRYM 315
>gb|AFK88550.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 227 bits (578), Expect = 2e-57
Identities = 107/126 (84%), Positives = 119/126 (94%)
Frame = -3
Query: 536 CLYVDDLIFTGNNPSMFEDFKTVMTNEFEMTDIGLMTYYLGIEVKQKEDGIFISQEGYAK 357
CLYVDDLIFTGNNPSMFE+FK MT EFEMTDIGLM+YYLGIEVKQ+++GIFI+QEGYAK
Sbjct: 190 CLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAK 249
Query: 356 EILKKFKMDDCNPVGTPVECGVKLSKHEEGQSVDPTFFKSLVGSLRYLTCTRPDILYAVG 177
E+LKKFKMDD NPV TP+ECG+KLSK+EEG+ VDPT FKSLVGSLRYLTCTRPDILYAVG
Sbjct: 250 EVLKKFKMDDSNPVTTPMECGIKLSKNEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVG 309
Query: 176 LVSRYM 159
+VSRYM
Sbjct: 310 VVSRYM 315
>gb|AFK88542.1| reverse transcriptase, partial [Arabidopsis halleri subsp.
gemmifera] gi|389595484|gb|AFK88545.1| reverse
transcriptase, partial [Arabidopsis halleri subsp.
gemmifera]
Length = 315
Score = 227 bits (578), Expect = 2e-57
Identities = 107/126 (84%), Positives = 119/126 (94%)
Frame = -3
Query: 536 CLYVDDLIFTGNNPSMFEDFKTVMTNEFEMTDIGLMTYYLGIEVKQKEDGIFISQEGYAK 357
CLYVDDLIFTGNNPSMFE+FK MT EFEMTDIGLM+YYLGIEVKQ+++GIFI+QEGYAK
Sbjct: 190 CLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAK 249
Query: 356 EILKKFKMDDCNPVGTPVECGVKLSKHEEGQSVDPTFFKSLVGSLRYLTCTRPDILYAVG 177
E+LKKFKMDD NPV TP+ECG+KLSK+EEG+ VDPT FKSLVGSLRYLTCTRPDILYAVG
Sbjct: 250 EVLKKFKMDDSNPVTTPMECGIKLSKNEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVG 309
Query: 176 LVSRYM 159
+VSRYM
Sbjct: 310 VVSRYM 315
>emb|CAN81839.1| hypothetical protein VITISV_033739 [Vitis vinifera]
Length = 1088
Score = 227 bits (578), Expect = 2e-57
Identities = 106/178 (59%), Positives = 136/178 (76%)
Frame = -3
Query: 536 CLYVDDLIFTGNNPSMFEDFKTVMTNEFEMTDIGLMTYYLGIEVKQKEDGIFISQEGYAK 357
CLYVD+LIFTGN+ SMF+ FK M EF+MTD+ + Y+LGIEV QK DGIFI+Q YA+
Sbjct: 770 CLYVDELIFTGNDESMFKQFKKSMMVEFDMTDLEKLRYFLGIEVMQKTDGIFINQRKYAQ 829
Query: 356 EILKKFKMDDCNPVGTPVECGVKLSKHEEGQSVDPTFFKSLVGSLRYLTCTRPDILYAVG 177
E+L++F + CNPV PV G KL++ +EG VD T +K +VGSL YLT TRPD++++V
Sbjct: 830 EVLERFNLYQCNPVHNPVVPGFKLTRDKEGVEVDGTLYKQMVGSLMYLTATRPDLMFSVS 889
Query: 176 LVSRYMETPTTTHLKAAKRILRYIKGTINFGMFYSSSNDYNLVGYSDSDWAGDIDDRK 3
L+SRYME PT +HL AAKRILRY+KGT+ FG+FY D +GY+DSD+AGD DDRK
Sbjct: 890 LISRYMEHPTESHLLAAKRILRYVKGTVEFGVFYKKGGDDKFIGYTDSDYAGDHDDRK 947