BLASTX nr result

ID: Sinomenium22_contig00016354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00016354
         (292 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB54132.1| GTP-binding protein TypA/BipA-like protein [Morus...    58   2e-06
ref|XP_003633251.1| PREDICTED: GTP-binding protein TypA/BipA hom...    57   3e-06
ref|XP_002278771.1| PREDICTED: GTP-binding protein TypA/BipA hom...    57   3e-06
emb|CAN77877.1| hypothetical protein VITISV_004501 [Vitis vinifera]    57   3e-06

>gb|EXB54132.1| GTP-binding protein TypA/BipA-like protein [Morus notabilis]
          Length = 652

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 40/88 (45%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
 Frame = -1

Query: 241 MASFLLRSFRSATRTPLSGAATRGSASLLQRTP--------GFTRHFXXXXXXXXXXXXA 86
           MA  L+RS  S+ R  LS + T  S+  L R P          +R F            +
Sbjct: 1   MAGPLIRSLWSSARKSLS-STTHSSSPPLARRPYLLSPHGASLSRAFSAFPDAAAVSSTS 59

Query: 85  HGRSLDPSMLRNVAVIAHVDHGKTTLMD 2
              SLDPS LRNVAVIAHVDHGKTTLMD
Sbjct: 60  PNSSLDPSRLRNVAVIAHVDHGKTTLMD 87


>ref|XP_003633251.1| PREDICTED: GTP-binding protein TypA/BipA homolog isoform 2 [Vitis
           vinifera]
          Length = 684

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 39/82 (47%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
 Frame = -1

Query: 241 MASFLLRSFRSATRTPLSGAATRGSAS--LLQRTPGFTRHFXXXXXXXXXXXXAHGRSLD 68
           MA  LLRS  S TR  LS ++        L  R   +T               A G SLD
Sbjct: 1   MAGPLLRSLWSTTRKSLSSSSPSAPLRPFLCPRPHAYTLPRCFSAVAGAAAAAAPGSSLD 60

Query: 67  PSMLRNVAVIAHVDHGKTTLMD 2
           P+ LRNVAVIAHVDHGKTTLMD
Sbjct: 61  PNRLRNVAVIAHVDHGKTTLMD 82


>ref|XP_002278771.1| PREDICTED: GTP-binding protein TypA/BipA homolog isoform 1 [Vitis
           vinifera] gi|302143376|emb|CBI21937.3| unnamed protein
           product [Vitis vinifera]
          Length = 672

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 39/82 (47%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
 Frame = -1

Query: 241 MASFLLRSFRSATRTPLSGAATRGSAS--LLQRTPGFTRHFXXXXXXXXXXXXAHGRSLD 68
           MA  LLRS  S TR  LS ++        L  R   +T               A G SLD
Sbjct: 1   MAGPLLRSLWSTTRKSLSSSSPSAPLRPFLCPRPHAYTLPRCFSAVAGAAAAAAPGSSLD 60

Query: 67  PSMLRNVAVIAHVDHGKTTLMD 2
           P+ LRNVAVIAHVDHGKTTLMD
Sbjct: 61  PNRLRNVAVIAHVDHGKTTLMD 82


>emb|CAN77877.1| hypothetical protein VITISV_004501 [Vitis vinifera]
          Length = 618

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 39/82 (47%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
 Frame = -1

Query: 241 MASFLLRSFRSATRTPLSGAATRGSAS--LLQRTPGFTRHFXXXXXXXXXXXXAHGRSLD 68
           MA  LLRS  S TR  LS ++        L  R   +T               A G SLD
Sbjct: 1   MAGPLLRSLWSTTRKSLSSSSPSAPLRPFLCPRPHAYTLPRCFSAVAGAAAAAAPGSSLD 60

Query: 67  PSMLRNVAVIAHVDHGKTTLMD 2
           P+ LRNVAVIAHVDHGKTTLMD
Sbjct: 61  PNRLRNVAVIAHVDHGKTTLMD 82


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