BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00016336
         (735 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi...   328   9e-88
emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]   327   2e-87
ref|XP_007227203.1| hypothetical protein PRUPE_ppa019251mg [Prun...   325   1e-86
ref|XP_002528570.1| pentatricopeptide repeat-containing protein,...   314   2e-83
ref|XP_004292932.1| PREDICTED: pentatricopeptide repeat-containi...   301   1e-79
ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containi...   301   2e-79
ref|XP_002301973.2| pentatricopeptide repeat-containing family p...   297   3e-78
ref|XP_004515286.1| PREDICTED: pentatricopeptide repeat-containi...   294   2e-77
ref|XP_004250454.1| PREDICTED: pentatricopeptide repeat-containi...   292   9e-77
gb|EYU34907.1| hypothetical protein MIMGU_mgv1a0030962mg, partia...   291   1e-76
gb|EYU24286.1| hypothetical protein MIMGU_mgv1a025107mg [Mimulus...   291   1e-76
gb|EYU18955.1| hypothetical protein MIMGU_mgv1a022111mg [Mimulus...   291   2e-76
ref|XP_002890375.1| pentatricopeptide repeat-containing protein ...   280   4e-73
ref|XP_006306841.1| hypothetical protein CARUB_v10008385mg [Caps...   275   2e-71
ref|XP_006587447.1| PREDICTED: pentatricopeptide repeat-containi...   273   6e-71
ref|XP_006828790.1| hypothetical protein AMTR_s00001p00116120 [A...   273   6e-71
ref|XP_007017888.1| Pentatricopeptide repeat (PPR) superfamily p...   271   2e-70
ref|XP_006416418.1| hypothetical protein EUTSA_v10009574mg [Eutr...   270   4e-70
ref|XP_007152607.1| hypothetical protein PHAVU_004G144300g [Phas...   268   1e-69
gb|AAF79892.1|AC022472_1 Contains similarity to an unknown prote...   264   2e-68

>ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  328 bits (842), Expect = 9e-88
 Identities = 161/243 (66%), Positives = 196/243 (80%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           A V+GF  DSFVQSSLVH+Y+K  Q+RDA +VF  M   DVV+WSA V+ YAR G ++EA
Sbjct: 140 ASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEA 199

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSA 374
           K +FSEM  SGV+PN ++WNG+IAGFNH+G + E+++   +MH+ GF+PDGT+ISSVL A
Sbjct: 200 KRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPA 259

Query: 373 AGDLEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSC 194
            GDLEDL MGI + GY IKQGL SDK V SALIDMYGKC   SEM QVF++M  MD+GSC
Sbjct: 260 VGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSC 319

Query: 193 NALVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQI 14
           NA + GLSRNG V+ +L++FRQ KDQGMELNVVSWTSMIA C+QNG+DIEAL +FREMQI
Sbjct: 320 NAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQI 379

Query: 13  AGV 5
           AGV
Sbjct: 380 AGV 382



 Score =  132 bits (333), Expect = 9e-29
 Identities = 71/234 (30%), Positives = 129/234 (55%)
 Frame = -3

Query: 721 GFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEVF 542
           G   D  V S+L+ +Y K     +  +VF +M H DV + +A + G +R G +  +  +F
Sbjct: 280 GLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLF 339

Query: 541 SEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDL 362
            +++  G+E N V+W  +IA  + NG   E+L   + M I G KP+  +I  +L A G++
Sbjct: 340 RQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNI 399

Query: 361 EDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALV 182
             L  G     +++++G+ +D +V SALIDMY KC R       F+ +   +L   NA++
Sbjct: 400 AALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVI 459

Query: 181 AGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREM 20
           AG + +G   +A+++F   +  G + +++S+T ++++C+Q+G   E    F  M
Sbjct: 460 AGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSM 513



 Score =  106 bits (265), Expect = 7e-21
 Identities = 59/170 (34%), Positives = 92/170 (54%)
 Frame = -3

Query: 517 EPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDLEDLEMGIQ 338
           EPN  +++ LI  F+    F  +L     M   G  PD   + S + A   L  L+   Q
Sbjct: 76  EPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQ 135

Query: 337 VQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALVAGLSRNGL 158
           V G A   G +SD +V S+L+ MY KC +  +  +VF+ M + D+ S +ALVA  +R G 
Sbjct: 136 VHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGC 195

Query: 157 VDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQIAG 8
           VD+A ++F +  D G++ N++SW  MIA    +G   EA+ +F +M + G
Sbjct: 196 VDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRG 245



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 38/129 (29%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           +L  G + D +V S+L+ +Y K G+++ +   F  +P +++V W+A ++GYA  G   EA
Sbjct: 412 SLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEA 471

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMH----IEGFKPDGTSISS 386
            E+F  M+RSG +P+ +++  +++  + +G   E      +M     IE        + +
Sbjct: 472 MEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVT 531

Query: 385 VLSAAGDLE 359
           +LS AG LE
Sbjct: 532 LLSRAGKLE 540


>emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score =  327 bits (839), Expect = 2e-87
 Identities = 160/243 (65%), Positives = 196/243 (80%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           A V+GF  DSFVQSSLVH+Y+K  Q+RDA +VF  M   DVV+WSA V+ YAR G ++EA
Sbjct: 140 ASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEA 199

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSA 374
           K +FSEM  SGV+PN ++WNG+IAGFNH+G + E+++   +MH+ GF+PDGT+ISSVL A
Sbjct: 200 KRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPA 259

Query: 373 AGDLEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSC 194
            GDLEDL MGI + GY IKQGL SDK V SALIDMYGKC   SEM QVF++M  MD+GSC
Sbjct: 260 VGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSC 319

Query: 193 NALVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQI 14
           NA + GLSRNG V+ +L++FRQ KDQGMELNVVSWTSMIA C+QNG+D+EAL +FREMQI
Sbjct: 320 NAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQI 379

Query: 13  AGV 5
           AGV
Sbjct: 380 AGV 382



 Score =  133 bits (334), Expect = 7e-29
 Identities = 71/234 (30%), Positives = 129/234 (55%)
 Frame = -3

Query: 721 GFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEVF 542
           G   D  V S+L+ +Y K     +  +VF +M H DV + +A + G +R G +  +  +F
Sbjct: 280 GLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRLF 339

Query: 541 SEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDL 362
            +++  G+E N V+W  +IA  + NG   E+L   + M I G KP+  +I  +L A G++
Sbjct: 340 RQLKDQGMELNVVSWTSMIACCSQNGRDMEALELFREMQIAGVKPNSVTIPCLLPACGNI 399

Query: 361 EDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALV 182
             L  G     +++++G+ +D +V SALIDMY KC R       F+ +   +L   NA++
Sbjct: 400 AALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVI 459

Query: 181 AGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREM 20
           AG + +G   +A+++F   +  G + +++S+T ++++C+Q+G   E    F  M
Sbjct: 460 AGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSM 513



 Score =  106 bits (265), Expect = 7e-21
 Identities = 59/170 (34%), Positives = 92/170 (54%)
 Frame = -3

Query: 517 EPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDLEDLEMGIQ 338
           EPN  +++ LI  F+    F  +L     M   G  PD   + S + A   L  L+   Q
Sbjct: 76  EPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQ 135

Query: 337 VQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALVAGLSRNGL 158
           V G A   G +SD +V S+L+ MY KC +  +  +VF+ M + D+ S +ALVA  +R G 
Sbjct: 136 VHGIASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGC 195

Query: 157 VDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQIAG 8
           VD+A ++F +  D G++ N++SW  MIA    +G   EA+ +F +M + G
Sbjct: 196 VDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRG 245



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 38/129 (29%), Positives = 71/129 (55%), Gaps = 4/129 (3%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           +L  G + D +V S+L+ +Y K G+++ +   F  +P +++V W+A ++GYA  G   EA
Sbjct: 412 SLRRGISTDVYVGSALIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEA 471

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMH----IEGFKPDGTSISS 386
            E+F  M+RSG +P+ +++  +++  + +G   E      +M     IE        + +
Sbjct: 472 MEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVT 531

Query: 385 VLSAAGDLE 359
           +LS AG LE
Sbjct: 532 LLSRAGKLE 540


>ref|XP_007227203.1| hypothetical protein PRUPE_ppa019251mg [Prunus persica]
           gi|462424139|gb|EMJ28402.1| hypothetical protein
           PRUPE_ppa019251mg [Prunus persica]
          Length = 654

 Score =  325 bits (832), Expect = 1e-86
 Identities = 160/243 (65%), Positives = 195/243 (80%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           A V+G A DSFVQSSLVH+Y+K  Q+RDA K+F  +P RDV+  SA +SGY+R G ++EA
Sbjct: 36  ASVSGLASDSFVQSSLVHMYIKCDQIRDARKLFDRVPQRDVIICSALISGYSRRGCVDEA 95

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSA 374
            ++ SEMR   +EPN V WNG+IAGFN +  + +++  LQ MH EGF+PDG+SISS L A
Sbjct: 96  MQLLSEMRGMCLEPNVVLWNGMIAGFNQSKLYADTVAVLQKMHSEGFQPDGSSISSALPA 155

Query: 373 AGDLEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSC 194
            G LEDL MGIQ+ GY +KQGL SDK VVSALIDMYGKC  + E  QVF EM QMD+G+C
Sbjct: 156 VGHLEDLGMGIQIHGYVVKQGLGSDKCVVSALIDMYGKCACSFETSQVFHEMDQMDVGAC 215

Query: 193 NALVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQI 14
           NALV GLSRNGLVD+AL+VFRQFKDQGMELN+VSWTS+IASC+QNGKD+EAL +FREMQ+
Sbjct: 216 NALVTGLSRNGLVDNALKVFRQFKDQGMELNIVSWTSIIASCSQNGKDMEALELFREMQV 275

Query: 13  AGV 5
            GV
Sbjct: 276 EGV 278



 Score =  136 bits (342), Expect = 9e-30
 Identities = 74/234 (31%), Positives = 130/234 (55%)
 Frame = -3

Query: 721 GFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEVF 542
           G   D  V S+L+ +Y K     +  +VF EM   DV A +A V+G +R G ++ A +VF
Sbjct: 176 GLGSDKCVVSALIDMYGKCACSFETSQVFHEMDQMDVGACNALVTGLSRNGLVDNALKVF 235

Query: 541 SEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDL 362
            + +  G+E N V+W  +IA  + NG   E+L   + M +EG +P+  +I  +L A G++
Sbjct: 236 RQFKDQGMELNIVSWTSIIASCSQNGKDMEALELFREMQVEGVEPNSVTIPCLLPACGNI 295

Query: 361 EDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALV 182
             L  G     +++++G+ +D +V S+LIDMY KC +       F+EM   +L   NA++
Sbjct: 296 AALMHGKAAHCFSLRRGISNDVYVGSSLIDMYAKCGKIRLSRLCFDEMPTRNLVCWNAVM 355

Query: 181 AGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREM 20
            G + +G  ++ ++VFR  +  G + + +S+T ++++C+Q G   E    F  M
Sbjct: 356 GGYAMHGKANETMEVFRLMQRSGQKPDFISFTCVLSACSQKGLTDEGWYYFNSM 409



 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 47/137 (34%), Positives = 74/137 (54%)
 Frame = -3

Query: 418 GFKPDGTSISSVLSAAGDLEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEM 239
           G  PD     SV+ A   L   + G QV   A   GL SD +V S+L+ MY KC +  + 
Sbjct: 5   GLVPDSFLFPSVVKACAGLPASKAGKQVHAIASVSGLASDSFVQSSLVHMYIKCDQIRDA 64

Query: 238 MQVFEEMAQMDLGSCNALVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQN 59
            ++F+ + Q D+  C+AL++G SR G VD+A+Q+  + +   +E NVV W  MIA   Q+
Sbjct: 65  RKLFDRVPQRDVIICSALISGYSRRGCVDEAMQLLSEMRGMCLEPNVVLWNGMIAGFNQS 124

Query: 58  GKDIEALGIFREMQIAG 8
               + + + ++M   G
Sbjct: 125 KLYADTVAVLQKMHSEG 141



 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           +L  G + D +V SSL+ +Y K G++R +   F EMP R++V W+A + GYA  G  NE 
Sbjct: 308 SLRRGISNDVYVGSSLIDMYAKCGKIRLSRLCFDEMPTRNLVCWNAVMGGYAMHGKANET 367

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMH----IEGFKPDGTSISS 386
            EVF  M+RSG +P+ +++  +++  +  G   E      +M     +E        + +
Sbjct: 368 MEVFRLMQRSGQKPDFISFTCVLSACSQKGLTDEGWYYFNSMSKEHGLEARVEHYACMVT 427

Query: 385 VLSAAGDLED 356
           +LS +G LE+
Sbjct: 428 LLSRSGKLEE 437


>ref|XP_002528570.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532014|gb|EEF33825.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 542

 Score =  314 bits (804), Expect = 2e-83
 Identities = 158/243 (65%), Positives = 193/243 (79%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           A V+GF  DS V SSLVH+Y+K  +++DA KVF ++   DVVA+SA ++GYAR G I E 
Sbjct: 129 ASVSGFGSDSRVLSSLVHMYIKCNRLKDAHKVFDKLSQPDVVAYSALLAGYARRGCIGET 188

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSA 374
            E+FS+    GVE N ++WNG+IAGFNH+ +  +++I  QNMH E FKPDGTSISSVLSA
Sbjct: 189 MELFSKRGDLGVELNLISWNGMIAGFNHSRHHLDAVIIFQNMHCEEFKPDGTSISSVLSA 248

Query: 373 AGDLEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSC 194
            GDL+ L+MG Q+ GY IKQGL  DK VVSALIDMYGKC    ++ +VF+EM  MD+G+C
Sbjct: 249 VGDLKMLDMGFQIHGYVIKQGLCQDKCVVSALIDMYGKCACTMKISEVFDEMYHMDVGAC 308

Query: 193 NALVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQI 14
           NALV GLSRNGLVD ALQVFR+FKDQGMELNVVSWTS+IASC+QNGKDIEAL +FREMQ+
Sbjct: 309 NALVTGLSRNGLVDKALQVFRRFKDQGMELNVVSWTSIIASCSQNGKDIEALELFREMQV 368

Query: 13  AGV 5
            GV
Sbjct: 369 VGV 371



 Score =  142 bits (359), Expect = 9e-32
 Identities = 80/234 (34%), Positives = 130/234 (55%)
 Frame = -3

Query: 721 GFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEVF 542
           G   D  V S+L+ +Y K        +VF EM H DV A +A V+G +R G +++A +VF
Sbjct: 269 GLCQDKCVVSALIDMYGKCACTMKISEVFDEMYHMDVGACNALVTGLSRNGLVDKALQVF 328

Query: 541 SEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDL 362
              +  G+E N V+W  +IA  + NG   E+L   + M + G KP+  +I  +L A G++
Sbjct: 329 RRFKDQGMELNVVSWTSIIASCSQNGKDIEALELFREMQVVGVKPNAVTIPCLLPACGNI 388

Query: 361 EDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALV 182
             L  G     +++K G+ S+ +V SAL+DMY KC R       F+ M   +L S NAL+
Sbjct: 389 AALMHGKAAHCFSLKSGISSNVYVGSALVDMYAKCGRIHISRLCFDIMPTRNLVSWNALM 448

Query: 181 AGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREM 20
           AG + +G   +A+ +F++ +  G + + VS+ S++++C+Q GK  E    F  M
Sbjct: 449 AGYAMHGQTKEAISIFQRMQRSGQKPDFVSFISVLSACSQGGKTNEGWSYFNSM 502



 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 53/152 (34%), Positives = 87/152 (57%)
 Frame = -3

Query: 475 NHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDLEDLEMGIQVQGYAIKQGLESDK 296
           NHN  FG+ +     M  +GF  D   + SV+ A   L  L+   QV   A   G  SD 
Sbjct: 80  NHN-QFGQVIRLSSQMLSQGFLLDRHVLPSVIKACAGLSFLKTAKQVHCMASVSGFGSDS 138

Query: 295 WVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALVAGLSRNGLVDDALQVFRQFKDQ 116
            V+S+L+ MY KC R  +  +VF++++Q D+ + +AL+AG +R G + + +++F +  D 
Sbjct: 139 RVLSSLVHMYIKCNRLKDAHKVFDKLSQPDVVAYSALLAGYARRGCIGETMELFSKRGDL 198

Query: 115 GMELNVVSWTSMIASCTQNGKDIEALGIFREM 20
           G+ELN++SW  MIA    +   ++A+ IF+ M
Sbjct: 199 GVELNLISWNGMIAGFNHSRHHLDAVIIFQNM 230



 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 31/94 (32%), Positives = 57/94 (60%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           +L +G + + +V S+LV +Y K G++  +   F  MP R++V+W+A ++GYA  G   EA
Sbjct: 401 SLKSGISSNVYVGSALVDMYAKCGRIHISRLCFDIMPTRNLVSWNALMAGYAMHGQTKEA 460

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGE 452
             +F  M+RSG +P+ V++  +++  +  G   E
Sbjct: 461 ISIFQRMQRSGQKPDFVSFISVLSACSQGGKTNE 494


>ref|XP_004292932.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Fragaria vesca subsp. vesca]
          Length = 755

 Score =  301 bits (772), Expect = 1e-79
 Identities = 146/240 (60%), Positives = 189/240 (78%)
 Frame = -3

Query: 724 TGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEV 545
           +GFALDSFVQSSLVH+Y+K  ++ DA KVF  +P RDV+ +SA +SGY+R G ++EA  +
Sbjct: 140 SGFALDSFVQSSLVHMYIKCDRIGDARKVFDRVPERDVIIYSALISGYSRRGCVDEAMRL 199

Query: 544 FSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGD 365
             EMR  G  PN V WNG+IAGF+ +  +  ++   Q MH +GF+PDG+SISSVL A G+
Sbjct: 200 LGEMRGLGFVPNVVLWNGMIAGFSQSKLYASTVGVFQKMHSQGFEPDGSSISSVLPAVGE 259

Query: 364 LEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNAL 185
           LEDL++G+Q+ G  IK+GL+SDK VVSAL+DMYGKC    EM +V  EM ++D+G+CNAL
Sbjct: 260 LEDLDIGVQIHGQVIKRGLKSDKCVVSALVDMYGKCACTLEMSRVVGEMDELDVGACNAL 319

Query: 184 VAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQIAGV 5
           V GL+RNGLVD+AL+VF QFK QG+ELN VSWTS+IASC+QNGKD+EAL +FREMQI GV
Sbjct: 320 VTGLARNGLVDNALEVFMQFKGQGVELNTVSWTSIIASCSQNGKDMEALELFREMQIEGV 379



 Score =  144 bits (362), Expect = 4e-32
 Identities = 80/234 (34%), Positives = 132/234 (56%)
 Frame = -3

Query: 721 GFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEVF 542
           G   D  V S+LV +Y K     +  +V  EM   DV A +A V+G AR G ++ A EVF
Sbjct: 277 GLKSDKCVVSALVDMYGKCACTLEMSRVVGEMDELDVGACNALVTGLARNGLVDNALEVF 336

Query: 541 SEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDL 362
            + +  GVE N+V+W  +IA  + NG   E+L   + M IEG +P+  +IS +L A G++
Sbjct: 337 MQFKGQGVELNTVSWTSIIASCSQNGKDMEALELFREMQIEGVEPNSMTISCLLPACGNI 396

Query: 361 EDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALV 182
             L  G     +A ++G+ SD +V SALIDMY KC +       F++M   +L   NA++
Sbjct: 397 AALTHGKAAHCFAFRRGMLSDVYVGSALIDMYAKCGKIQLSRLCFDKMPTRNLVCWNAVM 456

Query: 181 AGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREM 20
           +G + +G   + +++F   +  G++ +++S+T ++++C+QNG   E    F  M
Sbjct: 457 SGYAMHGKAKETMEIFHMMQRSGLKPDIISFTCVLSACSQNGLTEEGWYYFNSM 510



 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 53/169 (31%), Positives = 85/169 (50%)
 Frame = -3

Query: 514 PNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDLEDLEMGIQV 335
           PN  +++ LI  F     FG +L     M   G  PD     SV+ A   L+  +   QV
Sbjct: 74  PNLFSFSTLIHAFAKLNSFGNALSLFSQMLSRGLAPDSFLFPSVVKACAGLQSSQSARQV 133

Query: 334 QGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALVAGLSRNGLV 155
              +   G   D +V S+L+ MY KC R  +  +VF+ + + D+   +AL++G SR G V
Sbjct: 134 HAISFSSGFALDSFVQSSLVHMYIKCDRIGDARKVFDRVPERDVIIYSALISGYSRRGCV 193

Query: 154 DDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQIAG 8
           D+A+++  + +  G   NVV W  MIA  +Q+      +G+F++M   G
Sbjct: 194 DEAMRLLGEMRGLGFVPNVVLWNGMIAGFSQSKLYASTVGVFQKMHSQG 242



 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 45/153 (29%), Positives = 78/153 (50%), Gaps = 4/153 (2%)
 Frame = -3

Query: 721 GFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEVF 542
           G   D +V S+L+ +Y K G+++ +   F +MP R++V W+A +SGYA  G   E  E+F
Sbjct: 413 GMLSDVYVGSALIDMYAKCGKIQLSRLCFDKMPTRNLVCWNAVMSGYAMHGKAKETMEIF 472

Query: 541 SEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMH----IEGFKPDGTSISSVLSA 374
             M+RSG++P+ +++  +++  + NG   E      +M     IE        + ++L  
Sbjct: 473 HMMQRSGLKPDIISFTCVLSACSQNGLTEEGWYYFNSMSKEHGIEARIEHYACMVTLLGR 532

Query: 373 AGDLEDLEMGIQVQGYAIKQGLESDKWVVSALI 275
           AG L++    I+      K   E D  V  AL+
Sbjct: 533 AGKLDEAYSMIK------KMPFEPDACVWGALL 559


>ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like isoform X1 [Glycine max]
          Length = 748

 Score =  301 bits (770), Expect = 2e-79
 Identities = 143/243 (58%), Positives = 189/243 (77%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           A  +GF  DS V SSL H+Y+K  ++ DA K+F  MP RDVV WSA ++GY+RLG + EA
Sbjct: 130 AAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEA 189

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSA 374
           KE+F EMR  GVEPN V+WNG++AGF +NG++ E++   + M ++GF PDG+++S VL A
Sbjct: 190 KELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPA 249

Query: 373 AGDLEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSC 194
            G LED+ +G QV GY IKQGL SDK+VVSA++DMYGKC    EM +VF+E+ +M++GS 
Sbjct: 250 VGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSL 309

Query: 193 NALVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQI 14
           NA + GLSRNG+VD AL+VF +FKDQ MELNVV+WTS+IASC+QNGKD+EAL +FR+MQ 
Sbjct: 310 NAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQA 369

Query: 13  AGV 5
            GV
Sbjct: 370 YGV 372



 Score =  138 bits (347), Expect = 2e-30
 Identities = 70/234 (29%), Positives = 137/234 (58%)
 Frame = -3

Query: 721 GFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEVF 542
           G   D FV S+++ +Y K G +++  +VF E+   ++ + +A ++G +R G ++ A EVF
Sbjct: 270 GLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVF 329

Query: 541 SEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDL 362
           ++ +   +E N VTW  +IA  + NG   E+L   ++M   G +P+  +I S++ A G++
Sbjct: 330 NKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNI 389

Query: 361 EDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALV 182
             L  G ++  +++++G+  D +V SALIDMY KC R     + F++M+ ++L S NA++
Sbjct: 390 SALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVM 449

Query: 181 AGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREM 20
            G + +G   + +++F      G + ++V++T ++++C QNG   E    +  M
Sbjct: 450 KGYAMHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSM 503



 Score =  100 bits (249), Expect = 5e-19
 Identities = 55/169 (32%), Positives = 90/169 (53%)
 Frame = -3

Query: 514 PNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDLEDLEMGIQV 335
           P   +++ LI  F  + +F   L    ++H     PD   + S + +   L  L+ G Q+
Sbjct: 67  PTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQL 126

Query: 334 QGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALVAGLSRNGLV 155
             +A   G  +D  V S+L  MY KC R  +  ++F+ M   D+   +A++AG SR GLV
Sbjct: 127 HAFAAASGFLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLV 186

Query: 154 DDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQIAG 8
           ++A ++F + +  G+E N+VSW  M+A    NG   EA+G+FR M + G
Sbjct: 187 EEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQG 235



 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 4/130 (3%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           +L  G   D +V S+L+ +Y K G+++ A + F +M   ++V+W+A + GYA  G   E 
Sbjct: 402 SLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKET 461

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIE-GFKP---DGTSISS 386
            E+F  M +SG +P+ VT+  +++    NG   E      +M  E G +P       + +
Sbjct: 462 MEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVT 521

Query: 385 VLSAAGDLED 356
           +LS  G LE+
Sbjct: 522 LLSRVGKLEE 531


>ref|XP_002301973.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550344115|gb|EEE81246.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 724

 Score =  297 bits (760), Expect = 3e-78
 Identities = 151/243 (62%), Positives = 190/243 (78%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           ALV+G  LDS V SSL+H+YV++  ++DA  VF ++P   VV  SA +S +AR G + E 
Sbjct: 108 ALVSGLGLDSVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKET 167

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSA 374
           KE+F + R  GVE N V+WNG+I+GFN +G + ++++  QNMH+EG KPDGTS+SSVL A
Sbjct: 168 KELFYQTRDLGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPA 227

Query: 373 AGDLEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSC 194
            GDL+   MGIQ+  Y IKQGL  DK+VVSALIDMYGKC  ASEM  VF EM ++D+G+C
Sbjct: 228 VGDLDMPLMGIQIHCYVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGAC 287

Query: 193 NALVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQI 14
           NALV GLSRNGLVD+AL+VF+QFK  GM+LNVVSWTSMIASC+QNGKD+EAL +FREMQI
Sbjct: 288 NALVTGLSRNGLVDNALEVFKQFK--GMDLNVVSWTSMIASCSQNGKDMEALELFREMQI 345

Query: 13  AGV 5
            GV
Sbjct: 346 EGV 348



 Score =  134 bits (336), Expect = 4e-29
 Identities = 81/234 (34%), Positives = 128/234 (54%)
 Frame = -3

Query: 721 GFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEVF 542
           G   D FV S+L+ +Y K     +   VF EM   DV A +A V+G +R G ++ A EVF
Sbjct: 248 GLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALEVF 307

Query: 541 SEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDL 362
            + +  G++ N V+W  +IA  + NG   E+L   + M IEG KP+  +I  +L A G++
Sbjct: 308 KQFK--GMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNI 365

Query: 361 EDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALV 182
             L  G     ++++ G+ +D +V SALIDMY KC R       F+ M   +L S N+L+
Sbjct: 366 AALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLM 425

Query: 181 AGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREM 20
           AG + +G   +A+ +F   +  G + + VS+T ++++CTQ G   E    F  M
Sbjct: 426 AGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSM 479



 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 46/158 (29%), Positives = 87/158 (55%)
 Frame = -3

Query: 478 FNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDLEDLEMGIQVQGYAIKQGLESD 299
           F+   +FG  +     M  +G  PD   + +V+     L  L+ G Q+  +A+  GL  D
Sbjct: 57  FSKLNHFGHVIRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLD 116

Query: 298 KWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALVAGLSRNGLVDDALQVFRQFKD 119
             V+S+L+ MY +     +   VF+++ Q  + + +AL++  +R G V +  ++F Q +D
Sbjct: 117 SVVLSSLLHMYVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRD 176

Query: 118 QGMELNVVSWTSMIASCTQNGKDIEALGIFREMQIAGV 5
            G+ELN+VSW  MI+   ++G  ++A+ +F+ M + G+
Sbjct: 177 LGVELNLVSWNGMISGFNRSGSYLDAVLMFQNMHLEGL 214



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 36/130 (27%), Positives = 68/130 (52%), Gaps = 4/130 (3%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           +L  G   D +V S+L+ +Y K G+M  +   F  MP+R++V+W++ ++GYA  G   EA
Sbjct: 378 SLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNSLMAGYAMHGKTFEA 437

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMH----IEGFKPDGTSISS 386
             +F  M+R G +P+ V++  +++     G   E      +M     +E      + + +
Sbjct: 438 INIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVT 497

Query: 385 VLSAAGDLED 356
           +L  +G LE+
Sbjct: 498 LLGRSGRLEE 507


>ref|XP_004515286.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Cicer arietinum]
          Length = 730

 Score =  294 bits (753), Expect = 2e-77
 Identities = 143/243 (58%), Positives = 188/243 (77%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           A V+GF  DS + SSLVH+Y+K   + DA+K+F  M  RDVV WSA ++GY+RLG ++ A
Sbjct: 127 AYVSGFGSDSILISSLVHMYLKCKTIEDAQKLFDSMSERDVVVWSAMIAGYSRLGLVDRA 186

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSA 374
           KE+FSEMR  GVEPN V+WNG+IAGF + G +GE+ +  + M  EGF PDG+++S VL  
Sbjct: 187 KELFSEMRNEGVEPNLVSWNGMIAGFGNAGSYGEAAMLFRGMISEGFLPDGSAVSCVLPG 246

Query: 373 AGDLEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSC 194
            G+LED+ MG QV GY IKQGL+SD +V+SAL+DMYGKC   SEM +VF+E+ Q ++GS 
Sbjct: 247 IGNLEDVLMGKQVHGYVIKQGLDSDNFVISALLDMYGKCGCTSEMSRVFDEIDQTEIGSL 306

Query: 193 NALVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQI 14
           NA + GLSRNGLVD AL++F++FK Q +ELNVV+WTS+IASCTQ+GKD+EAL  FR+MQ 
Sbjct: 307 NAFLTGLSRNGLVDTALEMFKKFKAQEIELNVVTWTSIIASCTQHGKDMEALEFFRDMQA 366

Query: 13  AGV 5
            GV
Sbjct: 367 DGV 369



 Score =  132 bits (332), Expect = 1e-28
 Identities = 69/234 (29%), Positives = 132/234 (56%)
 Frame = -3

Query: 721 GFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEVF 542
           G   D+FV S+L+ +Y K G   +  +VF E+   ++ + +A ++G +R G ++ A E+F
Sbjct: 267 GLDSDNFVISALLDMYGKCGCTSEMSRVFDEIDQTEIGSLNAFLTGLSRNGLVDTALEMF 326

Query: 541 SEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDL 362
            + +   +E N VTW  +IA    +G   E+L   ++M  +G +P   +I S++ A G++
Sbjct: 327 KKFKAQEIELNVVTWTSIIASCTQHGKDMEALEFFRDMQADGVEPTAVTIPSLIPACGNV 386

Query: 361 EDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALV 182
             L  G ++  +++++G+  D +V SALIDMY KC R       F+ M   +L S N+++
Sbjct: 387 SALTHGKEIHCFSLRKGIFDDVYVGSALIDMYAKCGRIQLSRHCFDIMPAKNLVSWNSVM 446

Query: 181 AGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREM 20
           +G + +G   + +++F      G + +++++T ++++CTQNG   E    F  M
Sbjct: 447 SGYAMHGKARETIEMFNMMLQSGQKPDLITFTCVLSACTQNGLIEEGWNYFNSM 500



 Score =  105 bits (262), Expect = 2e-20
 Identities = 56/166 (33%), Positives = 93/166 (56%)
 Frame = -3

Query: 517 EPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDLEDLEMGIQ 338
           +P   +++ +I  F  + +F   L     M   G  PD   + S + A   L+ L++G Q
Sbjct: 63  QPTLFSFSSIINSFARSRHFNHVLGVFSQMGSLGLVPDSYLLPSAIKACSALKALKLGRQ 122

Query: 337 VQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALVAGLSRNGL 158
           V G+A   G  SD  ++S+L+ MY KC+   +  ++F+ M++ D+   +A++AG SR GL
Sbjct: 123 VHGFAYVSGFGSDSILISSLVHMYLKCKTIEDAQKLFDSMSERDVVVWSAMIAGYSRLGL 182

Query: 157 VDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREM 20
           VD A ++F + +++G+E N+VSW  MIA     G   EA  +FR M
Sbjct: 183 VDRAKELFSEMRNEGVEPNLVSWNGMIAGFGNAGSYGEAAMLFRGM 228



 Score = 60.1 bits (144), Expect = 8e-07
 Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 18/148 (12%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           +L  G   D +V S+L+ +Y K G+++ +   F  MP +++V+W++ +SGYA  G   E 
Sbjct: 399 SLRKGIFDDVYVGSALIDMYAKCGRIQLSRHCFDIMPAKNLVSWNSVMSGYAMHGKARET 458

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIE--------------- 419
            E+F+ M +SG +P+ +T+  +++    NG   E      +M  E               
Sbjct: 459 IEMFNMMLQSGQKPDLITFTCVLSACTQNGLIEEGWNYFNSMSKEHDVEPRMEHYAYSIV 518

Query: 418 ---GFKPDGTSISSVLSAAGDLEDLEMG 344
               F+PD     S+LS+    ++L +G
Sbjct: 519 KEMPFEPDACVWGSLLSSCRVHKNLSLG 546


>ref|XP_004250454.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Solanum lycopersicum]
          Length = 828

 Score =  292 bits (747), Expect = 9e-77
 Identities = 146/242 (60%), Positives = 187/242 (77%)
 Frame = -3

Query: 730 LVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAK 551
           L TG ALDSFV++SLVH+YVK  Q++ A K+F +M   DVV+WSA   GYA+ G +  AK
Sbjct: 211 LTTGLALDSFVEASLVHMYVKCDQLKCARKMFDKMREPDVVSWSALSGGYAKKGDVFNAK 270

Query: 550 EVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAA 371
            VF E  + G+EPN V+WNG+IAGFN +G + E+++  Q M+ +GF+ DGTSISSVL A 
Sbjct: 271 MVFDEGGKLGIEPNLVSWNGMIAGFNQSGCYLEAVLMFQRMNSDGFRSDGTSISSVLPAV 330

Query: 370 GDLEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCN 191
            DLEDL+MG+QV  + IK G ESD  ++SAL+DMYGKCR  SEM +VFE   ++DLG  N
Sbjct: 331 SDLEDLKMGVQVHSHVIKTGFESDNCIISALVDMYGKCRCTSEMSRVFEGAEEIDLGGFN 390

Query: 190 ALVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQIA 11
           ALVAGLSRNGLVD+A +VF++FK +  ELNVVSWTSMI+SC+Q+GKD+EAL IFREMQ+A
Sbjct: 391 ALVAGLSRNGLVDEAFKVFKKFKLKVKELNVVSWTSMISSCSQHGKDLEALEIFREMQLA 450

Query: 10  GV 5
            V
Sbjct: 451 KV 452



 Score =  117 bits (294), Expect = 3e-24
 Identities = 65/223 (29%), Positives = 121/223 (54%)
 Frame = -3

Query: 724  TGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEV 545
            TGF  D+ + S+LV +Y K     +  +VF      D+  ++A V+G +R G ++EA +V
Sbjct: 349  TGFESDNCIISALVDMYGKCRCTSEMSRVFEGAEEIDLGGFNALVAGLSRNGLVDEAFKV 408

Query: 544  FSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGD 365
            F + +    E N V+W  +I+  + +G   E+L   + M +   +P+  +IS +L A G+
Sbjct: 409  FKKFKLKVKELNVVSWTSMISSCSQHGKDLEALEIFREMQLAKVRPNSVTISCLLPACGN 468

Query: 364  LEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNAL 185
            +  L  G     ++++     D +V SALIDMY  C R      +F+ M   +L   NA+
Sbjct: 469  IAALVHGKATHCFSLRNWFSDDVYVSSALIDMYANCGRIQLARVIFDRMPVRNLVCWNAM 528

Query: 184  VAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNG 56
             +G + +G   +A+++F   +  G + + +S+TS++++C+Q G
Sbjct: 529  TSGYAMHGKAKEAIEIFDSMRRSGQKPDFISFTSVLSACSQAG 571



 Score = 93.6 bits (231), Expect = 6e-17
 Identities = 65/239 (27%), Positives = 117/239 (48%), Gaps = 4/239 (1%)
 Frame = -3

Query: 712 LDSFVQSSLVHLYVKWGQMRDAEKV---FVEMPHRDVVAWSARV-SGYARLGYINEAKEV 545
           LDS + ++++ L  +   +   ++V    ++  H     ++ +V S YA       A+ +
Sbjct: 81  LDSLMPNTILSLIARSSSLSQTQQVHAHILKTGHSSDTHFTNKVLSLYANFNCFANAESL 140

Query: 544 FSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGD 365
              +      PN  ++  LI   + +  F  +L+    +  +   PD   + S + A   
Sbjct: 141 LHSLPN----PNIFSFKSLIHASSKSNLFSYTLVLFSRLLSKCILPDVHVLPSAIKACAG 196

Query: 364 LEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNAL 185
           L   E+G QV GY +  GL  D +V ++L+ MY KC +     ++F++M + D+ S +AL
Sbjct: 197 LSASEVGKQVHGYGLTTGLALDSFVEASLVHMYVKCDQLKCARKMFDKMREPDVVSWSAL 256

Query: 184 VAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQIAG 8
             G ++ G V +A  VF +    G+E N+VSW  MIA   Q+G  +EA+ +F+ M   G
Sbjct: 257 SGGYAKKGDVFNAKMVFDEGGKLGIEPNLVSWNGMIAGFNQSGCYLEAVLMFQRMNSDG 315


>gb|EYU34907.1| hypothetical protein MIMGU_mgv1a0030962mg, partial [Mimulus
           guttatus]
          Length = 476

 Score =  291 bits (746), Expect = 1e-76
 Identities = 146/243 (60%), Positives = 185/243 (76%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           +L +G +LDSFVQSSLVH YVK  ++ DA K+F  M  RDVV+WSA  +GYAR G    A
Sbjct: 36  SLASGISLDSFVQSSLVHFYVKCDELVDAHKLFDNMVERDVVSWSALAAGYARKGDRVNA 95

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSA 374
           ++VF+E++  G +PN+V+WNG+IAGFN +G F ++++  Q MH  GFK DGTSISSVL A
Sbjct: 96  RKVFNEVKNLGFQPNTVSWNGMIAGFNQSGCFLDAVLMFQQMHKHGFKSDGTSISSVLPA 155

Query: 373 AGDLEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSC 194
            GDL  L  G QV GY IK G   DK +VSALIDMYGKC  A EM QV E+M Q+++G+C
Sbjct: 156 IGDLGYLSTGTQVHGYVIKNGFAVDKCIVSALIDMYGKCGCALEMSQVLEDMGQVEVGAC 215

Query: 193 NALVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQI 14
           NAL+ GL+R+GLVD AL+VF++ + Q MELNVVSWTS+IA C+Q+GKDIEAL +FREMQ 
Sbjct: 216 NALITGLARHGLVDKALRVFKELQGQQMELNVVSWTSVIACCSQHGKDIEALELFREMQS 275

Query: 13  AGV 5
           AGV
Sbjct: 276 AGV 278



 Score =  125 bits (315), Expect = 1e-26
 Identities = 72/234 (30%), Positives = 128/234 (54%)
 Frame = -3

Query: 721 GFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEVF 542
           GFA+D  + S+L+ +Y K G   +  +V  +M   +V A +A ++G AR G +++A  VF
Sbjct: 176 GFAVDKCIVSALIDMYGKCGCALEMSQVLEDMGQVEVGACNALITGLARHGLVDKALRVF 235

Query: 541 SEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDL 362
            E++   +E N V+W  +IA  + +G   E+L   + M   G KP+  +I  +L A G++
Sbjct: 236 KELQGQQMELNVVSWTSVIACCSQHGKDIEALELFREMQSAGVKPNAVTIPCLLPACGNI 295

Query: 361 EDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALV 182
             L  G     +++++G+  D +V SALIDMY  C +       F+ M   +L   NA++
Sbjct: 296 AALMHGKAAHCFSLRRGISGDVYVGSALIDMYANCGKIQLARCCFDRMPVRNLVCWNAML 355

Query: 181 AGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREM 20
            G + +G  ++A++ F   +  G + + VS TS++++C+Q+G   E    F  M
Sbjct: 356 GGYAMHGKANEAIEFFLMMQRSGQKPDSVSLTSLLSACSQSGLTEEGHRYFDRM 409



 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 47/137 (34%), Positives = 78/137 (56%)
 Frame = -3

Query: 418 GFKPDGTSISSVLSAAGDLEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEM 239
           G  PD   + SV+ A   L  + +G QV G+++  G+  D +V S+L+  Y KC    + 
Sbjct: 5   GLFPDAHVLPSVIKACAGLLAVNIGKQVHGFSLASGISLDSFVQSSLVHFYVKCDELVDA 64

Query: 238 MQVFEEMAQMDLGSCNALVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQN 59
            ++F+ M + D+ S +AL AG +R G   +A +VF + K+ G + N VSW  MIA   Q+
Sbjct: 65  HKLFDNMVERDVVSWSALAAGYARKGDRVNARKVFNEVKNLGFQPNTVSWNGMIAGFNQS 124

Query: 58  GKDIEALGIFREMQIAG 8
           G  ++A+ +F++M   G
Sbjct: 125 GCFLDAVLMFQQMHKHG 141



 Score = 70.9 bits (172), Expect = 4e-10
 Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 4/157 (2%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           +L  G + D +V S+L+ +Y   G+++ A   F  MP R++V W+A + GYA  G  NEA
Sbjct: 308 SLRRGISGDVYVGSALIDMYANCGKIQLARCCFDRMPVRNLVCWNAMLGGYAMHGKANEA 367

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIE-GFKP---DGTSISS 386
            E F  M+RSG +P+SV+   L++  + +G   E       M  + G KP       + S
Sbjct: 368 IEFFLMMQRSGQKPDSVSLTSLLSACSQSGLTEEGHRYFDRMTTDHGIKPRVEHYACVVS 427

Query: 385 VLSAAGDLEDLEMGIQVQGYAIKQGLESDKWVVSALI 275
           +L  AG LE+    I+      K   E D  V  AL+
Sbjct: 428 LLGRAGKLEEAYSMIE------KMPFEPDACVWGALL 458


>gb|EYU24286.1| hypothetical protein MIMGU_mgv1a025107mg [Mimulus guttatus]
          Length = 654

 Score =  291 bits (746), Expect = 1e-76
 Identities = 146/243 (60%), Positives = 185/243 (76%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           +L +G +LDSFVQSSLVH YVK  ++ DA K+F  M  RDVV+WSA  +GYAR G    A
Sbjct: 36  SLASGISLDSFVQSSLVHFYVKCDELVDAHKLFDNMVERDVVSWSALAAGYARKGDRVNA 95

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSA 374
           ++VF+E++  G +PN+V+WNG+IAGFN +G F ++++  Q MH  GFK DGTSISSVL A
Sbjct: 96  RKVFNEVKNLGFQPNTVSWNGMIAGFNQSGCFLDAVLMFQQMHKHGFKSDGTSISSVLPA 155

Query: 373 AGDLEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSC 194
            GDL  L  G QV GY IK G   DK +VSALIDMYGKC  A EM QV E+M Q+++G+C
Sbjct: 156 IGDLGYLSTGTQVHGYVIKNGFAVDKCIVSALIDMYGKCGCALEMSQVLEDMGQVEVGAC 215

Query: 193 NALVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQI 14
           NAL+ GL+R+GLVD AL+VF++ + Q MELNVVSWTS+IA C+Q+GKDIEAL +FREMQ 
Sbjct: 216 NALITGLARHGLVDKALRVFKELQGQQMELNVVSWTSVIACCSQHGKDIEALELFREMQS 275

Query: 13  AGV 5
           AGV
Sbjct: 276 AGV 278



 Score =  125 bits (313), Expect = 2e-26
 Identities = 72/234 (30%), Positives = 128/234 (54%)
 Frame = -3

Query: 721 GFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEVF 542
           GFA+D  + S+L+ +Y K G   +  +V  +M   +V A +A ++G AR G +++A  VF
Sbjct: 176 GFAVDKCIVSALIDMYGKCGCALEMSQVLEDMGQVEVGACNALITGLARHGLVDKALRVF 235

Query: 541 SEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDL 362
            E++   +E N V+W  +IA  + +G   E+L   + M   G KP+  +I  +L A G++
Sbjct: 236 KELQGQQMELNVVSWTSVIACCSQHGKDIEALELFREMQSAGVKPNAVTIPCLLPACGNI 295

Query: 361 EDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALV 182
             L  G     +++++G+  D +V SALIDMY  C +       F+ M   +L   NA++
Sbjct: 296 AALMHGKAAHCFSLRRGISGDVYVGSALIDMYANCGKIQLARCCFDRMPVRNLVCWNAML 355

Query: 181 AGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREM 20
            G + +G  ++A++ F   +  G + + VS TS++++C+Q+G   E    F  M
Sbjct: 356 GGYAMHGKANEAIEFFLLMQRSGQKPDSVSLTSLLSACSQSGLTEEGHRYFDRM 409



 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 47/137 (34%), Positives = 78/137 (56%)
 Frame = -3

Query: 418 GFKPDGTSISSVLSAAGDLEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEM 239
           G  PD   + SV+ A   L  + +G QV G+++  G+  D +V S+L+  Y KC    + 
Sbjct: 5   GLFPDAHVLPSVIKACAGLLAVNIGKQVHGFSLASGISLDSFVQSSLVHFYVKCDELVDA 64

Query: 238 MQVFEEMAQMDLGSCNALVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQN 59
            ++F+ M + D+ S +AL AG +R G   +A +VF + K+ G + N VSW  MIA   Q+
Sbjct: 65  HKLFDNMVERDVVSWSALAAGYARKGDRVNARKVFNEVKNLGFQPNTVSWNGMIAGFNQS 124

Query: 58  GKDIEALGIFREMQIAG 8
           G  ++A+ +F++M   G
Sbjct: 125 GCFLDAVLMFQQMHKHG 141



 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 4/157 (2%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           +L  G + D +V S+L+ +Y   G+++ A   F  MP R++V W+A + GYA  G  NEA
Sbjct: 308 SLRRGISGDVYVGSALIDMYANCGKIQLARCCFDRMPVRNLVCWNAMLGGYAMHGKANEA 367

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIE-GFKP---DGTSISS 386
            E F  M+RSG +P+SV+   L++  + +G   E       M  + G KP       + S
Sbjct: 368 IEFFLLMQRSGQKPDSVSLTSLLSACSQSGLTEEGHRYFDRMTTDHGIKPRVEHYACVVS 427

Query: 385 VLSAAGDLEDLEMGIQVQGYAIKQGLESDKWVVSALI 275
           +L  AG LE+    I+      K   E D  V  AL+
Sbjct: 428 LLGRAGKLEEAYSMIE------KMPFEPDACVWGALL 458


>gb|EYU18955.1| hypothetical protein MIMGU_mgv1a022111mg [Mimulus guttatus]
          Length = 654

 Score =  291 bits (744), Expect = 2e-76
 Identities = 145/243 (59%), Positives = 184/243 (75%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           +L +G +LDSFVQSSLVH YVK  ++ DA K+F  M  RDVV+WSA  +GYAR G    A
Sbjct: 36  SLASGISLDSFVQSSLVHFYVKCDELVDAHKLFDNMVERDVVSWSALAAGYARKGDAVNA 95

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSA 374
           ++VF+E++  G +PN+V+WNG+IAGFN +G F ++++  Q MH  GFK DGTSISSVL A
Sbjct: 96  RKVFNEVKNLGFQPNTVSWNGMIAGFNRSGCFLDAVLMFQQMHKHGFKSDGTSISSVLPA 155

Query: 373 AGDLEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSC 194
            GDL  L  G QV GY IK G   DK +VSALIDMYGKC  A EM QV E+M Q+++G+C
Sbjct: 156 IGDLGYLSSGTQVHGYVIKNGFAVDKCIVSALIDMYGKCGYALEMSQVLEDMGQVEVGAC 215

Query: 193 NALVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQI 14
           NAL+ GL+R+GLVD AL VF++ + Q MELNVVSWTS+IA C+Q+GKDIEAL +FREMQ 
Sbjct: 216 NALITGLARHGLVDKALGVFKELQGQQMELNVVSWTSVIACCSQHGKDIEALELFREMQA 275

Query: 13  AGV 5
           +GV
Sbjct: 276 SGV 278



 Score =  125 bits (315), Expect = 1e-26
 Identities = 72/234 (30%), Positives = 128/234 (54%)
 Frame = -3

Query: 721 GFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEVF 542
           GFA+D  + S+L+ +Y K G   +  +V  +M   +V A +A ++G AR G +++A  VF
Sbjct: 176 GFAVDKCIVSALIDMYGKCGYALEMSQVLEDMGQVEVGACNALITGLARHGLVDKALGVF 235

Query: 541 SEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDL 362
            E++   +E N V+W  +IA  + +G   E+L   + M   G KP+  +I  +L A G++
Sbjct: 236 KELQGQQMELNVVSWTSVIACCSQHGKDIEALELFREMQASGVKPNAVTIPCLLPACGNI 295

Query: 361 EDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALV 182
             L  G     +++++G+  D +V SALIDMY  C +       F+ M+  +L   NA++
Sbjct: 296 AALMHGKAAHCFSLRRGISGDVYVGSALIDMYANCGKIQLARCCFDRMSVRNLVCWNAML 355

Query: 181 AGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREM 20
            G + +G   +A++ F   +  G + + VS TS++++C+Q+G   E    F  M
Sbjct: 356 GGYAMHGKAKEAIEFFLLMQRSGQKPDSVSLTSLLSACSQSGLTEEGHRYFDRM 409



 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 46/138 (33%), Positives = 80/138 (57%)
 Frame = -3

Query: 421 EGFKPDGTSISSVLSAAGDLEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASE 242
           +G  PD   + SV+ A   L  +++G QV G+++  G+  D +V S+L+  Y KC    +
Sbjct: 4   QGLFPDAHVLPSVIKACAGLLAVKIGKQVHGFSLASGISLDSFVQSSLVHFYVKCDELVD 63

Query: 241 MMQVFEEMAQMDLGSCNALVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQ 62
             ++F+ M + D+ S +AL AG +R G   +A +VF + K+ G + N VSW  MIA   +
Sbjct: 64  AHKLFDNMVERDVVSWSALAAGYARKGDAVNARKVFNEVKNLGFQPNTVSWNGMIAGFNR 123

Query: 61  NGKDIEALGIFREMQIAG 8
           +G  ++A+ +F++M   G
Sbjct: 124 SGCFLDAVLMFQQMHKHG 141



 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 50/157 (31%), Positives = 77/157 (49%), Gaps = 4/157 (2%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           +L  G + D +V S+L+ +Y   G+++ A   F  M  R++V W+A + GYA  G   EA
Sbjct: 308 SLRRGISGDVYVGSALIDMYANCGKIQLARCCFDRMSVRNLVCWNAMLGGYAMHGKAKEA 367

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIE-GFKP---DGTSISS 386
            E F  M+RSG +P+SV+   L++  + +G   E       M  + G KP       + S
Sbjct: 368 IEFFLLMQRSGQKPDSVSLTSLLSACSQSGLTEEGHRYFDRMTTDHGIKPRVEHYACVVS 427

Query: 385 VLSAAGDLEDLEMGIQVQGYAIKQGLESDKWVVSALI 275
           +L  AG LE+    I+      K   E D  V  AL+
Sbjct: 428 LLGRAGKLEEAYSMIE------KMPFEPDACVWGALL 458


>ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297336217|gb|EFH66634.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 760

 Score =  280 bits (716), Expect = 4e-73
 Identities = 136/243 (55%), Positives = 177/243 (72%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           A V+G  +D+FVQ SL H+Y++ G+M DA KVF  M  +DVV  SA + GYAR G + E 
Sbjct: 142 ACVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEV 201

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSA 374
             + SEM +SG+EPN V+WNG+++GFN +GY  E++I  Q MH  GF PD  ++SSVL +
Sbjct: 202 VRILSEMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPS 261

Query: 373 AGDLEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSC 194
            GD E+L MG Q+ GY IKQGL  DK V+SA++DMYGK      ++++F+E   M+ G C
Sbjct: 262 VGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVC 321

Query: 193 NALVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQI 14
           NA + GLSRNGLVD AL++F  FK+Q MELNVVSWTS+IA C QNGKDIEAL +FREMQ+
Sbjct: 322 NAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQV 381

Query: 13  AGV 5
           AGV
Sbjct: 382 AGV 384



 Score =  120 bits (300), Expect = 6e-25
 Identities = 73/234 (31%), Positives = 119/234 (50%)
 Frame = -3

Query: 721 GFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEVF 542
           G   D  V S+++ +Y K G +    K+F E    +    +A ++G +R G +++A E+F
Sbjct: 282 GLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMF 341

Query: 541 SEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDL 362
              +   +E N V+W  +IAG   NG   E+L   + M + G KP+  +I S+L A G++
Sbjct: 342 GLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNI 401

Query: 361 EDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALV 182
             L  G    G+A++  L  D  V SALIDMY KC R      VF  M   +L   N+L+
Sbjct: 402 AALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLM 461

Query: 181 AGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREM 20
            G S +G   + + +F       ++ + +S+TS++++C Q G   E    F  M
Sbjct: 462 NGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFNMM 515



 Score = 92.8 bits (229), Expect = 1e-16
 Identities = 47/195 (24%), Positives = 98/195 (50%)
 Frame = -3

Query: 592 VSGYARLGYINEAKEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGF 413
           ++ Y+     N+A  +   +     +P   +++ LI        F +S+     M   G 
Sbjct: 57  IASYSNYNCFNDADLILQSIP----DPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGL 112

Query: 412 KPDGTSISSVLSAAGDLEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQ 233
            PD   + ++     +L   + G Q+   A   GL+ D +V  +L  MY +C R  +  +
Sbjct: 113 IPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRCGRMGDARK 172

Query: 232 VFEEMAQMDLGSCNALVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGK 53
           VF+ M++ D+ +C+AL+ G +R G +++ +++  + +  G+E N+VSW  +++   ++G 
Sbjct: 173 VFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSGY 232

Query: 52  DIEALGIFREMQIAG 8
             EA+ +F++M   G
Sbjct: 233 HKEAVIMFQKMHHLG 247


>ref|XP_006306841.1| hypothetical protein CARUB_v10008385mg [Capsella rubella]
           gi|482575552|gb|EOA39739.1| hypothetical protein
           CARUB_v10008385mg [Capsella rubella]
          Length = 760

 Score =  275 bits (702), Expect = 2e-71
 Identities = 133/241 (55%), Positives = 174/241 (72%)
 Frame = -3

Query: 727 VTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKE 548
           V+G  +D+FVQ SL H+Y++ G+M DA KVF  M  +DVV  SA + GYAR G + E   
Sbjct: 144 VSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMFEKDVVTCSALLCGYARKGCLEEVVR 203

Query: 547 VFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAG 368
           + S M  SG+EPN V+WNG+++GFN +GY  E++I  Q MH+ GF PD  ++SSVL + G
Sbjct: 204 ILSGMENSGIEPNIVSWNGILSGFNRSGYHREAVIMFQKMHLCGFSPDQVTVSSVLPSVG 263

Query: 367 DLEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNA 188
           D E L MG Q+ GY IKQGL  DK V+SA++DMYGK      ++++F+E   M+ G CNA
Sbjct: 264 DSEMLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNA 323

Query: 187 LVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQIAG 8
            + GLSRNGLVD AL++F  FK+Q +ELNVVSWTS+IA C QNGKDIEAL +FREMQ+AG
Sbjct: 324 YITGLSRNGLVDKALEMFELFKEQKVELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG 383

Query: 7   V 5
           V
Sbjct: 384 V 384



 Score =  123 bits (308), Expect = 7e-26
 Identities = 76/234 (32%), Positives = 120/234 (51%)
 Frame = -3

Query: 721 GFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEVF 542
           G   D  V S+++ +Y K G +    K+F E    +    +A ++G +R G +++A E+F
Sbjct: 282 GLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMF 341

Query: 541 SEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDL 362
              +   VE N V+W  +IAG   NG   E+L   + M + G KP+  +I S+L A G++
Sbjct: 342 ELFKEQKVELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNI 401

Query: 361 EDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALV 182
             L  G    G+A++  L  D  V SALIDMY KC R +    VF  M   +L   N+L+
Sbjct: 402 AALGHGRSTHGFAVRVHLWDDVHVGSALIDMYAKCGRINMSQFVFNMMPTKNLVCWNSLM 461

Query: 181 AGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREM 20
            G S +G   + + +F       ++ + +S+TS++ASC Q G   E    F  M
Sbjct: 462 NGYSMHGKAKEVMSIFESLLRTRLKPDFISFTSLLASCGQVGLTDEGWKYFSMM 515



 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 43/170 (25%), Positives = 90/170 (52%)
 Frame = -3

Query: 517 EPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDLEDLEMGIQ 338
           +P   +++ LI        F +S+     M   G  PD   + ++     +L   ++G Q
Sbjct: 78  DPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQ 137

Query: 337 VQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALVAGLSRNGL 158
           +   +   GL+ D +V  +L  MY +C R  +  +VF+ M + D+ +C+AL+ G +R G 
Sbjct: 138 IHCVSCVSGLDMDAFVQGSLFHMYMRCGRMGDARKVFDRMFEKDVVTCSALLCGYARKGC 197

Query: 157 VDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQIAG 8
           +++ +++    ++ G+E N+VSW  +++   ++G   EA+ +F++M + G
Sbjct: 198 LEEVVRILSGMENSGIEPNIVSWNGILSGFNRSGYHREAVIMFQKMHLCG 247


>ref|XP_006587447.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 601

 Score =  273 bits (697), Expect = 6e-71
 Identities = 130/225 (57%), Positives = 174/225 (77%)
 Frame = -3

Query: 679 LYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEVFSEMRRSGVEPNSVT 500
           +Y+K  ++RDA K+F  MP RDVV WSA V+GY+RLG ++EAKE F EMR  G+ PN V+
Sbjct: 1   MYLKCDRIRDARKLFDMMPERDVVVWSAMVAGYSRLGLVDEAKEFFGEMRSGGMAPNLVS 60

Query: 499 WNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDLEDLEMGIQVQGYAI 320
           WNG++AGF +NG +  +L   + M ++GF PDG+++S VL + G LED  +G QV GY I
Sbjct: 61  WNGMLAGFGNNGLYDVALGMFRMMLVDGFWPDGSTVSCVLPSVGCLEDAVVGAQVHGYVI 120

Query: 319 KQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALVAGLSRNGLVDDALQ 140
           KQGL  DK+VVSA++DMYGKC    EM +VF+E+ +M++GS NA + GLSRNG+VD AL+
Sbjct: 121 KQGLGCDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDAALE 180

Query: 139 VFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQIAGV 5
           VF +FKD+ MELNVV+WTS+IASC+QNGKD+EAL +FR+MQ  GV
Sbjct: 181 VFNKFKDRKMELNVVTWTSIIASCSQNGKDLEALELFRDMQADGV 225



 Score =  139 bits (350), Expect = 1e-30
 Identities = 71/234 (30%), Positives = 137/234 (58%)
 Frame = -3

Query: 721 GFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEVF 542
           G   D FV S+++ +Y K G +++  +VF E+   ++ + +A ++G +R G ++ A EVF
Sbjct: 123 GLGCDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDAALEVF 182

Query: 541 SEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDL 362
           ++ +   +E N VTW  +IA  + NG   E+L   ++M  +G +P+  +I S++ A G++
Sbjct: 183 NKFKDRKMELNVVTWTSIIASCSQNGKDLEALELFRDMQADGVEPNAVTIPSLIPACGNI 242

Query: 361 EDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALV 182
             L  G ++  +++++G+  D +V SALIDMY KC R       F++M+  +L S NA++
Sbjct: 243 SALMHGKEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLSRCCFDKMSAPNLVSWNAVM 302

Query: 181 AGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREM 20
           +G + +G   + +++F      G + N+V++T ++++C QNG   E    +  M
Sbjct: 303 SGYAMHGKAKETMEMFHMMLQSGQKPNLVTFTCVLSACAQNGLTEEGWRYYNSM 356



 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 42/130 (32%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           +L  G   D +V S+L+ +Y K G+++ +   F +M   ++V+W+A +SGYA  G   E 
Sbjct: 255 SLRRGIFDDVYVGSALIDMYAKCGRIQLSRCCFDKMSAPNLVSWNAVMSGYAMHGKAKET 314

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIE-GFKP---DGTSISS 386
            E+F  M +SG +PN VT+  +++    NG   E      +M  E GF+P       + +
Sbjct: 315 MEMFHMMLQSGQKPNLVTFTCVLSACAQNGLTEEGWRYYNSMSEEHGFEPKMEHYACMVT 374

Query: 385 VLSAAGDLED 356
           +LS  G LE+
Sbjct: 375 LLSRVGKLEE 384


>ref|XP_006828790.1| hypothetical protein AMTR_s00001p00116120 [Amborella trichopoda]
           gi|548833769|gb|ERM96206.1| hypothetical protein
           AMTR_s00001p00116120 [Amborella trichopoda]
          Length = 414

 Score =  273 bits (697), Expect = 6e-71
 Identities = 140/243 (57%), Positives = 172/243 (70%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           ++  GF+ D +VQ SLVH YVK  Q+ DA  VF  M  ++VV+WSA VSGYAR G ++EA
Sbjct: 163 SITLGFSCDPYVQCSLVHTYVKCNQIGDARLVFDRMREKNVVSWSAIVSGYARGGDVDEA 222

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSA 374
           K +F EM+  GVEPN V+WNGL+AG    G   ESL     M   G  PDGT+ISSVL A
Sbjct: 223 KRLFKEMQAHGVEPNVVSWNGLVAGLAQAGLASESLRTFLEMAANGCGPDGTTISSVLPA 282

Query: 373 AGDLEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSC 194
             +LEDL  G Q+ GY IK GL  D  VVSAL+DMYG C +A EM+Q FE+    D+GS 
Sbjct: 283 IAELEDLVGGRQIHGYTIKLGLGFDVCVVSALLDMYGTCGKAKEMLQAFEDTPTKDVGSF 342

Query: 193 NALVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQI 14
           NALVAG SRNGLVD ALQVFR+ +  GMELN++SWTSM+A+  QNG+D+EAL +FREMQI
Sbjct: 343 NALVAGFSRNGLVDKALQVFREIEGLGMELNIISWTSMVAALAQNGRDLEALDLFREMQI 402

Query: 13  AGV 5
            G+
Sbjct: 403 TGI 405



 Score = 94.4 bits (233), Expect = 4e-17
 Identities = 63/241 (26%), Positives = 108/241 (44%)
 Frame = -3

Query: 730 LVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAK 551
           L TGFA+   + + L++LY +   +  A  +F  +P  D +A+++               
Sbjct: 63  LTTGFAVRPLLATKLINLYARNAALSHAALLFETIPRPDALAFAS--------------- 107

Query: 550 EVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAA 371
                               L++ +     F ++L     M   G  PD  ++ S L A 
Sbjct: 108 --------------------LVSAYTRATRFSDALKLFHRMVKCGLIPDHFALPSALKAC 147

Query: 370 GDLEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCN 191
             L   E   Q+   +I  G   D +V  +L+  Y KC +  +   VF+ M + ++ S +
Sbjct: 148 AGLPAPEPARQLHSLSITLGFSCDPYVQCSLVHTYVKCNQIGDARLVFDRMREKNVVSWS 207

Query: 190 ALVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQIA 11
           A+V+G +R G VD+A ++F++ +  G+E NVVSW  ++A   Q G   E+L  F EM   
Sbjct: 208 AIVSGYARGGDVDEAKRLFKEMQAHGVEPNVVSWNGLVAGLAQAGLASESLRTFLEMAAN 267

Query: 10  G 8
           G
Sbjct: 268 G 268



 Score = 69.7 bits (169), Expect = 1e-09
 Identities = 34/111 (30%), Positives = 64/111 (57%)
 Frame = -3

Query: 721 GFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEVF 542
           G   D  V S+L+ +Y   G+ ++  + F + P +DV +++A V+G++R G +++A +VF
Sbjct: 303 GLGFDVCVVSALLDMYGTCGKAKEMLQAFEDTPTKDVGSFNALVAGFSRNGLVDKALQVF 362

Query: 541 SEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSIS 389
            E+   G+E N ++W  ++A    NG   E+L   + M I G  P+  ++S
Sbjct: 363 REIEGLGMELNIISWTSMVAALAQNGRDLEALDLFREMQITGISPNSCTVS 413


>ref|XP_007017888.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao] gi|508723216|gb|EOY15113.1| Pentatricopeptide
           repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 758

 Score =  271 bits (693), Expect = 2e-70
 Identities = 139/239 (58%), Positives = 177/239 (74%), Gaps = 2/239 (0%)
 Frame = -3

Query: 721 GFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEVF 542
           GF  DS VQ+SLVHLY+K  +++DA+ VF  +P RDVV   A +S YAR G +NEAKE+F
Sbjct: 142 GFDSDSVVQASLVHLYLKGDRIQDAKNVFERLPERDVVTCGALLSAYARKGCVNEAKEIF 201

Query: 541 SEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDL 362
             M+  GV PN V+WNG+I GFN +  + E+++  + MH EGF PD  +ISSV SA GDL
Sbjct: 202 YGMQSFGVGPNLVSWNGMITGFNQSEQYNEAVVMFKEMHSEGFLPDDITISSVFSAVGDL 261

Query: 361 EDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQ--MDLGSCNA 188
           E L +GIQV  Y IK GL   K+V+SAL+DM+GKC  A E+M+ FEE+ +  MD G+ NA
Sbjct: 262 ERLNIGIQVLCYVIKLGLLHCKFVISALMDMFGKCACAGELMKAFEEVDEEIMDTGALNA 321

Query: 187 LVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQIA 11
           L+ GLSRNGLVD AL+ F++F+ QG ELNVVSWTS+IA C+QNGKDIEAL +FREMQ A
Sbjct: 322 LITGLSRNGLVDVALETFQRFRVQGRELNVVSWTSIIAGCSQNGKDIEALELFREMQSA 380



 Score =  116 bits (290), Expect = 9e-24
 Identities = 69/230 (30%), Positives = 118/230 (51%), Gaps = 2/230 (0%)
 Frame = -3

Query: 703 FVQSSLVHLYVKWGQMRDAEKVFVEMPHR--DVVAWSARVSGYARLGYINEAKEVFSEMR 530
           FV S+L+ ++ K     +  K F E+     D  A +A ++G +R G ++ A E F   R
Sbjct: 284 FVISALMDMFGKCACAGELMKAFEEVDEEIMDTGALNALITGLSRNGLVDVALETFQRFR 343

Query: 529 RSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDLEDLE 350
             G E N V+W  +IAG + NG   E+L   + M     KP+  +I  +L A G++  L 
Sbjct: 344 VQGRELNVVSWTSIIAGCSQNGKDIEALELFREMQSARLKPNSVTIPCLLPACGNIAALI 403

Query: 349 MGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALVAGLS 170
            G    G+AI+ G+ +D  V SAL+DMY KC R       F+ +   +    NA++ G +
Sbjct: 404 HGKAAHGFAIRTGIANDVHVGSALVDMYAKCGRIHLSRLCFDRIPSKNSVCWNAIMGGYA 463

Query: 169 RNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREM 20
            +G   +A+ +F   + +G + + +S++ ++++C+Q G   E    F  M
Sbjct: 464 MHGKAKEAIDIFHMMQRRGQKPDFISFSCVLSACSQGGLTEEGWHFFNSM 513



 Score =  102 bits (253), Expect = 2e-19
 Identities = 61/203 (30%), Positives = 103/203 (50%)
 Frame = -3

Query: 616 DVVAWSARVSGYARLGYINEAKEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIAL 437
           D +  +  +S YA      EA+ V + +     EP   +++ LI   N    F +SL   
Sbjct: 45  DTLISTKLISQYANRHCFAEAELVLNSIS----EPLVSSFSALIYALNKYNLFTQSLYVF 100

Query: 436 QNMHIEGFKPDGTSISSVLSAAGDLEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKC 257
             M   G  PD   + +V+ A G L   ++G +V G  +K G +SD  V ++L+ +Y K 
Sbjct: 101 SRMLSRGILPDNRVLPNVVKACGKLSAFKLGKEVHGIVVKYGFDSDSVVQASLVHLYLKG 160

Query: 256 RRASEMMQVFEEMAQMDLGSCNALVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMI 77
            R  +   VFE + + D+ +C AL++  +R G V++A ++F   +  G+  N+VSW  MI
Sbjct: 161 DRIQDAKNVFERLPERDVVTCGALLSAYARKGCVNEAKEIFYGMQSFGVGPNLVSWNGMI 220

Query: 76  ASCTQNGKDIEALGIFREMQIAG 8
               Q+ +  EA+ +F+EM   G
Sbjct: 221 TGFNQSEQYNEAVVMFKEMHSEG 243



 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 3/156 (1%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           A+ TG A D  V S+LV +Y K G++  +   F  +P ++ V W+A + GYA  G   EA
Sbjct: 412 AIRTGIANDVHVGSALVDMYAKCGRIHLSRLCFDRIPSKNSVCWNAIMGGYAMHGKAKEA 471

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIE-GFKPDGTSISSVLS 377
            ++F  M+R G +P+ ++++ +++  +  G   E      +M  + G K      S +++
Sbjct: 472 IDIFHMMQRRGQKPDFISFSCVLSACSQGGLTEEGWHFFNSMSRDHGVKAKMEHYSCMVN 531

Query: 376 AAGDLEDLEMGIQVQGYAIKQGL--ESDKWVVSALI 275
             G    LE     Q YA+ Q +  E D  V  AL+
Sbjct: 532 LLGRSGKLE-----QAYALIQQMPFEPDACVWGALL 562


>ref|XP_006416418.1| hypothetical protein EUTSA_v10009574mg [Eutrema salsugineum]
           gi|557094189|gb|ESQ34771.1| hypothetical protein
           EUTSA_v10009574mg [Eutrema salsugineum]
          Length = 760

 Score =  270 bits (690), Expect = 4e-70
 Identities = 131/239 (54%), Positives = 173/239 (72%)
 Frame = -3

Query: 721 GFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEVF 542
           G   D+FVQ SL H+Y++ G+M DA KVF  M  +DVV  SA + GYAR G + +   + 
Sbjct: 146 GLDEDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEDVVRIL 205

Query: 541 SEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDL 362
           SEM +SG+EPN V+WNG+++GFN +GY  E++I  Q MH  GF PD  ++SSVL + GD 
Sbjct: 206 SEMEKSGIEPNIVSWNGILSGFNRSGYHEEAVIMFQKMHHLGFFPDEVAVSSVLPSVGDS 265

Query: 361 EDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALV 182
           E L+MG Q+ GY IKQGL  DK V SA+IDMYGK  +   ++++FE++  M+ G CNA +
Sbjct: 266 EKLDMGRQIHGYVIKQGLLKDKCVTSAMIDMYGKSGQVYGIIKLFEQVELMETGVCNACI 325

Query: 181 AGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQIAGV 5
            GLSRNGL+D AL++F  FK+Q +ELNVVSWTS+IA C QNGKDIEAL +FREMQ+A V
Sbjct: 326 TGLSRNGLIDKALEMFELFKEQNIELNVVSWTSIIAGCAQNGKDIEALELFREMQVARV 384



 Score =  124 bits (310), Expect = 4e-26
 Identities = 73/234 (31%), Positives = 124/234 (52%)
 Frame = -3

Query: 721 GFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEVF 542
           G   D  V S+++ +Y K GQ+    K+F ++   +    +A ++G +R G I++A E+F
Sbjct: 282 GLLKDKCVTSAMIDMYGKSGQVYGIIKLFEQVELMETGVCNACITGLSRNGLIDKALEMF 341

Query: 541 SEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDL 362
              +   +E N V+W  +IAG   NG   E+L   + M +   KP+  +I S+L A G++
Sbjct: 342 ELFKEQNIELNVVSWTSIIAGCAQNGKDIEALELFREMQVARVKPNRVTIPSMLPACGNI 401

Query: 361 EDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALV 182
             L  G    G+A++  L  D  V SALIDMY KC R +    VF+ M   +L   N+L+
Sbjct: 402 AALVHGRSAHGFAVRVHLLDDVHVGSALIDMYAKCGRINMSQMVFDMMPTRNLVCWNSLM 461

Query: 181 AGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREM 20
           +G S +G   + + +F       ++ + +S+TS++++C+Q G   E    F  M
Sbjct: 462 SGYSMHGKAKEVMSIFDSLVRTRLKPDFISFTSLLSACSQVGLTDEGWKYFGMM 515



 Score = 93.2 bits (230), Expect = 8e-17
 Identities = 48/198 (24%), Positives = 100/198 (50%)
 Frame = -3

Query: 601 SARVSGYARLGYINEAKEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHI 422
           S  ++ Y+     ++A  +   +     +P+  +++ LI        F +SL     M  
Sbjct: 54  SKLIASYSNYSCFDDANLILQSIP----DPSVYSFSSLIYALTKAKLFSQSLGVFSRMFS 109

Query: 421 EGFKPDGTSISSVLSAAGDLEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASE 242
            G  PD   + ++     +L   + G Q+   +   GL+ D +V  +L  MY +C R  +
Sbjct: 110 HGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVSCTLGLDEDAFVQGSLFHMYMRCGRMGD 169

Query: 241 MMQVFEEMAQMDLGSCNALVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQ 62
             +VF+ M++ D+ +C+AL+ G +R G ++D +++  + +  G+E N+VSW  +++   +
Sbjct: 170 ARKVFDRMSEKDVVTCSALLCGYARKGCLEDVVRILSEMEKSGIEPNIVSWNGILSGFNR 229

Query: 61  NGKDIEALGIFREMQIAG 8
           +G   EA+ +F++M   G
Sbjct: 230 SGYHEEAVIMFQKMHHLG 247


>ref|XP_007152607.1| hypothetical protein PHAVU_004G144300g [Phaseolus vulgaris]
           gi|561025916|gb|ESW24601.1| hypothetical protein
           PHAVU_004G144300g [Phaseolus vulgaris]
          Length = 601

 Score =  268 bits (686), Expect = 1e-69
 Identities = 129/225 (57%), Positives = 172/225 (76%)
 Frame = -3

Query: 679 LYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEVFSEMRRSGVEPNSVT 500
           +Y+K  ++  A K+F  MP RDVV WSA ++GY+RLG ++EA+ +F EMR  GVEPN VT
Sbjct: 1   MYLKCDRIVGARKLFDRMPERDVVVWSAMIAGYSRLGLVDEARGLFGEMRSCGVEPNLVT 60

Query: 499 WNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDLEDLEMGIQVQGYAI 320
           WNG++AGF +NG + E++   + M +EGF PDG+++S VL + G LED+ MG QV GY  
Sbjct: 61  WNGMLAGFGNNGLYDEAVGMFRVMLLEGFWPDGSTVSCVLPSVGCLEDVVMGAQVHGYVT 120

Query: 319 KQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALVAGLSRNGLVDDALQ 140
           KQGL  DK+VVSAL+DMYGKC    EM +VF+E+ +M++GS NA + GLSRNG+VD AL+
Sbjct: 121 KQGLICDKFVVSALLDMYGKCGFVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDAALE 180

Query: 139 VFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQIAGV 5
           VF + KDQ +ELNVV+WTS+IASC+QNGKD EAL +FR+MQ  GV
Sbjct: 181 VFNRLKDQRVELNVVTWTSVIASCSQNGKDFEALELFRDMQAYGV 225



 Score =  139 bits (350), Expect = 1e-30
 Identities = 71/234 (30%), Positives = 135/234 (57%)
 Frame = -3

Query: 721 GFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEVF 542
           G   D FV S+L+ +Y K G +++  +VF E+   ++ + +A ++G +R G ++ A EVF
Sbjct: 123 GLICDKFVVSALLDMYGKCGFVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDAALEVF 182

Query: 541 SEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDL 362
           + ++   VE N VTW  +IA  + NG   E+L   ++M   G +P+  +I S++ A G++
Sbjct: 183 NRLKDQRVELNVVTWTSVIASCSQNGKDFEALELFRDMQAYGVEPNAVTIPSLIPACGNI 242

Query: 361 EDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALV 182
             L  G ++  +++++G+  D +V SALIDMY KC R     + F+ M   +L S NA++
Sbjct: 243 SALTHGKEIHCFSLRKGIFDDVYVGSALIDMYAKCGRIQLSRRCFDNMLAPNLVSWNAVI 302

Query: 181 AGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREM 20
           +G + +G   + +++F   +  G + + +++T ++++C QNG   E    +  M
Sbjct: 303 SGYAMHGKAKETMEMFHMMQQSGQKPDSITFTCILSACAQNGLTEEGWHYYNSM 356



 Score = 62.4 bits (150), Expect = 2e-07
 Identities = 40/130 (30%), Positives = 71/130 (54%), Gaps = 4/130 (3%)
 Frame = -3

Query: 733 ALVTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEA 554
           +L  G   D +V S+L+ +Y K G+++ + + F  M   ++V+W+A +SGYA  G   E 
Sbjct: 255 SLRKGIFDDVYVGSALIDMYAKCGRIQLSRRCFDNMLAPNLVSWNAVISGYAMHGKAKET 314

Query: 553 KEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIE-GFKP---DGTSISS 386
            E+F  M++SG +P+S+T+  +++    NG   E      +M  E G +P       + +
Sbjct: 315 MEMFHMMQQSGQKPDSITFTCILSACAQNGLTEEGWHYYNSMSKEHGIEPKMEHYACMVT 374

Query: 385 VLSAAGDLED 356
           +LS  G LE+
Sbjct: 375 LLSRVGKLEE 384


>gb|AAF79892.1|AC022472_1 Contains similarity to an unknown protein F28A21.160 gi|7486269
           from Arabidopsis thaliana BAC F28A21 gi|T04867 and
           contains multiple PPR PF|01535 repeats. EST gb|AI999742
           comes from this gene. This gene may be cut off, partial
           [Arabidopsis thaliana]
          Length = 757

 Score =  264 bits (675), Expect = 2e-68
 Identities = 129/241 (53%), Positives = 169/241 (70%)
 Frame = -3

Query: 727 VTGFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKE 548
           V+G  +D+FVQ S+ H+Y++ G+M DA KVF  M  +DVV  SA +  YAR G + E   
Sbjct: 144 VSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVR 203

Query: 547 VFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAG 368
           + SEM  SG+E N V+WNG+++GFN +GY  E+++  Q +H  GF PD  ++SSVL + G
Sbjct: 204 ILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVG 263

Query: 367 DLEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNA 188
           D E L MG  + GY IKQGL  DK V+SA+IDMYGK      ++ +F +   M+ G CNA
Sbjct: 264 DSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNA 323

Query: 187 LVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREMQIAG 8
            + GLSRNGLVD AL++F  FK+Q MELNVVSWTS+IA C QNGKDIEAL +FREMQ+AG
Sbjct: 324 YITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAG 383

Query: 7   V 5
           V
Sbjct: 384 V 384



 Score =  117 bits (292), Expect = 5e-24
 Identities = 70/234 (29%), Positives = 120/234 (51%)
 Frame = -3

Query: 721 GFALDSFVQSSLVHLYVKWGQMRDAEKVFVEMPHRDVVAWSARVSGYARLGYINEAKEVF 542
           G   D  V S+++ +Y K G +     +F +    +    +A ++G +R G +++A E+F
Sbjct: 282 GLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMF 341

Query: 541 SEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGFKPDGTSISSVLSAAGDL 362
              +   +E N V+W  +IAG   NG   E+L   + M + G KP+  +I S+L A G++
Sbjct: 342 ELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNI 401

Query: 361 EDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQVFEEMAQMDLGSCNALV 182
             L  G    G+A++  L  +  V SALIDMY KC R +    VF  M   +L   N+L+
Sbjct: 402 AALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLM 461

Query: 181 AGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGKDIEALGIFREM 20
            G S +G   + + +F       ++ + +S+TS++++C Q G   E    F+ M
Sbjct: 462 NGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMM 515



 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 44/195 (22%), Positives = 97/195 (49%)
 Frame = -3

Query: 592 VSGYARLGYINEAKEVFSEMRRSGVEPNSVTWNGLIAGFNHNGYFGESLIALQNMHIEGF 413
           ++ Y+     N+A  V   +     +P   +++ LI        F +S+     M   G 
Sbjct: 57  IASYSNYNCFNDADLVLQSIP----DPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGL 112

Query: 412 KPDGTSISSVLSAAGDLEDLEMGIQVQGYAIKQGLESDKWVVSALIDMYGKCRRASEMMQ 233
            PD   + ++     +L   ++G Q+   +   GL+ D +V  ++  MY +C R  +  +
Sbjct: 113 IPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARK 172

Query: 232 VFEEMAQMDLGSCNALVAGLSRNGLVDDALQVFRQFKDQGMELNVVSWTSMIASCTQNGK 53
           VF+ M+  D+ +C+AL+   +R G +++ +++  + +  G+E N+VSW  +++   ++G 
Sbjct: 173 VFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSGY 232

Query: 52  DIEALGIFREMQIAG 8
             EA+ +F+++   G
Sbjct: 233 HKEAVVMFQKIHHLG 247