BLASTX nr result
ID: Sinomenium22_contig00016030
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00016030
(290 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-... 170 2e-40
ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citr... 170 2e-40
dbj|BAA88922.1| sigma factor [Nicotiana tabacum] 167 1e-39
ref|XP_006347341.1| PREDICTED: RNA polymerase sigma factor sigA-... 167 2e-39
ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutr... 166 4e-39
ref|XP_004241445.1| PREDICTED: RNA polymerase sigma factor sigA-... 165 7e-39
ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protei... 164 9e-39
ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-... 164 2e-38
gb|EXB29118.1| RNA polymerase sigma factor rpoD [Morus notabilis] 162 3e-38
ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao] g... 162 4e-38
ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-lik... 162 4e-38
emb|CBI26421.3| unnamed protein product [Vitis vinifera] 162 4e-38
ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Popu... 161 8e-38
ref|XP_006878659.1| hypothetical protein AMTR_s00011p00266100 [A... 160 1e-37
ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-... 160 1e-37
ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [... 160 1e-37
dbj|BAA88921.1| sigma factor [Nicotiana tabacum] 160 2e-37
ref|XP_003534364.1| PREDICTED: RNA polymerase sigma factor sigA-... 159 4e-37
ref|XP_002886771.1| RNA polymerase sigma subunit 1 [Arabidopsis ... 158 6e-37
ref|XP_006302143.1| hypothetical protein CARUB_v10020145mg [Caps... 158 8e-37
>ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Citrus
sinensis] gi|568862456|ref|XP_006484699.1| PREDICTED:
RNA polymerase sigma factor sigA-like isoform X2 [Citrus
sinensis] gi|568862458|ref|XP_006484700.1| PREDICTED:
RNA polymerase sigma factor sigA-like isoform X3 [Citrus
sinensis]
Length = 508
Score = 170 bits (430), Expect = 2e-40
Identities = 81/94 (86%), Positives = 88/94 (93%)
Frame = +1
Query: 1 YIADNRPENNPWNGVDEWLLKDEVNDLISTTLGAREQDIIRLYYGLDKECLTWEDISRRI 180
YIADNR ENNPW+GVD+W LKDEVN LI TLG RE++IIRLYYGLDKECLTWEDIS+RI
Sbjct: 415 YIADNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRI 474
Query: 181 GLSRERVRQVGLVALEKLKHAARKRKLEAMLVKH 282
GLSRERVRQVGLVALEKLKHAARK+K+EAMLVKH
Sbjct: 475 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 508
>ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citrus clementina]
gi|557539599|gb|ESR50643.1| hypothetical protein
CICLE_v10031289mg [Citrus clementina]
Length = 508
Score = 170 bits (430), Expect = 2e-40
Identities = 81/94 (86%), Positives = 88/94 (93%)
Frame = +1
Query: 1 YIADNRPENNPWNGVDEWLLKDEVNDLISTTLGAREQDIIRLYYGLDKECLTWEDISRRI 180
YIADNR ENNPW+GVD+W LKDEVN LI TLG RE++IIRLYYGLDKECLTWEDIS+RI
Sbjct: 415 YIADNRVENNPWHGVDDWALKDEVNKLIIVTLGEREREIIRLYYGLDKECLTWEDISKRI 474
Query: 181 GLSRERVRQVGLVALEKLKHAARKRKLEAMLVKH 282
GLSRERVRQVGLVALEKLKHAARK+K+EAMLVKH
Sbjct: 475 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 508
>dbj|BAA88922.1| sigma factor [Nicotiana tabacum]
Length = 502
Score = 167 bits (423), Expect = 1e-39
Identities = 80/94 (85%), Positives = 89/94 (94%)
Frame = +1
Query: 1 YIADNRPENNPWNGVDEWLLKDEVNDLISTTLGAREQDIIRLYYGLDKECLTWEDISRRI 180
YIADNR EN PW+GVDEW+LKDEVN+LIS+TL RE++I+RLYYGLD ECLTWEDISRRI
Sbjct: 409 YIADNRLENIPWHGVDEWMLKDEVNNLISSTLREREREIVRLYYGLDNECLTWEDISRRI 468
Query: 181 GLSRERVRQVGLVALEKLKHAARKRKLEAMLVKH 282
GLSRERVRQVGLVALEKLKHAARKR+L+AMLVKH
Sbjct: 469 GLSRERVRQVGLVALEKLKHAARKRRLDAMLVKH 502
>ref|XP_006347341.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1
[Solanum tuberosum] gi|565361192|ref|XP_006347342.1|
PREDICTED: RNA polymerase sigma factor sigA-like isoform
X2 [Solanum tuberosum]
Length = 505
Score = 167 bits (422), Expect = 2e-39
Identities = 80/94 (85%), Positives = 88/94 (93%)
Frame = +1
Query: 1 YIADNRPENNPWNGVDEWLLKDEVNDLISTTLGAREQDIIRLYYGLDKECLTWEDISRRI 180
YIADNR ENNPW+GVD W LKDEVN+LIS+TL RE+DI+RLYYGLD ECLTWEDISRRI
Sbjct: 412 YIADNRLENNPWHGVDGWALKDEVNNLISSTLRERERDIVRLYYGLDNECLTWEDISRRI 471
Query: 181 GLSRERVRQVGLVALEKLKHAARKRKLEAMLVKH 282
GLSRERVRQVGLVALEKLKHAARK++L+AMLVKH
Sbjct: 472 GLSRERVRQVGLVALEKLKHAARKKQLDAMLVKH 505
>ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutrema salsugineum]
gi|557097090|gb|ESQ37598.1| hypothetical protein
EUTSA_v10002486mg [Eutrema salsugineum]
Length = 519
Score = 166 bits (419), Expect = 4e-39
Identities = 79/94 (84%), Positives = 88/94 (93%)
Frame = +1
Query: 1 YIADNRPENNPWNGVDEWLLKDEVNDLISTTLGAREQDIIRLYYGLDKECLTWEDISRRI 180
YIADNR ENNPW+G DEW LKDEV+ LIS TLG RE++IIRLYYGLDKECLTWEDIS+RI
Sbjct: 426 YIADNRLENNPWHGYDEWALKDEVSKLISATLGEREREIIRLYYGLDKECLTWEDISKRI 485
Query: 181 GLSRERVRQVGLVALEKLKHAARKRKLEAMLVKH 282
GLSRERVRQVGLVALEKLKHAARKRK+EAM++K+
Sbjct: 486 GLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 519
>ref|XP_004241445.1| PREDICTED: RNA polymerase sigma factor sigA-like [Solanum
lycopersicum]
Length = 505
Score = 165 bits (417), Expect = 7e-39
Identities = 80/94 (85%), Positives = 87/94 (92%)
Frame = +1
Query: 1 YIADNRPENNPWNGVDEWLLKDEVNDLISTTLGAREQDIIRLYYGLDKECLTWEDISRRI 180
YIADNR ENNPW+GVD W LKDEVN+LIS+ L RE+DIIRLYYGLD ECLTWEDISRRI
Sbjct: 412 YIADNRLENNPWHGVDGWALKDEVNNLISSILRERERDIIRLYYGLDNECLTWEDISRRI 471
Query: 181 GLSRERVRQVGLVALEKLKHAARKRKLEAMLVKH 282
GLSRERVRQVGLVALEKLKHAARK++L+AMLVKH
Sbjct: 472 GLSRERVRQVGLVALEKLKHAARKKQLDAMLVKH 505
>ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
gi|222862757|gb|EEF00264.1| RNA POLYMERASE SIGMA SUBUNIT
1 family protein [Populus trichocarpa]
Length = 509
Score = 164 bits (416), Expect = 9e-39
Identities = 78/94 (82%), Positives = 87/94 (92%)
Frame = +1
Query: 1 YIADNRPENNPWNGVDEWLLKDEVNDLISTTLGAREQDIIRLYYGLDKECLTWEDISRRI 180
YIADNRPENNPW+GVDEW LK+EVN LI +TL RE++IIRLY+GLD+ECLTWEDIS+R+
Sbjct: 416 YIADNRPENNPWHGVDEWALKEEVNKLIDSTLQEREKEIIRLYHGLDQECLTWEDISKRM 475
Query: 181 GLSRERVRQVGLVALEKLKHAARKRKLEAMLVKH 282
GLSRERVRQVGLVALEKLKHAARKR EAMLVKH
Sbjct: 476 GLSRERVRQVGLVALEKLKHAARKRNTEAMLVKH 509
>ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-like [Glycine max]
Length = 503
Score = 164 bits (414), Expect = 2e-38
Identities = 79/94 (84%), Positives = 87/94 (92%)
Frame = +1
Query: 1 YIADNRPENNPWNGVDEWLLKDEVNDLISTTLGAREQDIIRLYYGLDKECLTWEDISRRI 180
YIADNR EN PWNGVDEW LKDEVN LI+ TL RE++IIRLYYGL+KECLTWEDIS+RI
Sbjct: 410 YIADNRVENIPWNGVDEWALKDEVNRLINVTLVEREREIIRLYYGLEKECLTWEDISKRI 469
Query: 181 GLSRERVRQVGLVALEKLKHAARKRKLEAMLVKH 282
GLSRERVRQVGLVALEKLKHAARKR++EAML+KH
Sbjct: 470 GLSRERVRQVGLVALEKLKHAARKRQMEAMLLKH 503
>gb|EXB29118.1| RNA polymerase sigma factor rpoD [Morus notabilis]
Length = 508
Score = 162 bits (411), Expect = 3e-38
Identities = 78/94 (82%), Positives = 86/94 (91%)
Frame = +1
Query: 1 YIADNRPENNPWNGVDEWLLKDEVNDLISTTLGAREQDIIRLYYGLDKECLTWEDISRRI 180
YIADN EN PW+GVDEW LK+EVN LI+TTLG RE DIIRLYYGLD ECLTWEDIS+RI
Sbjct: 415 YIADNCSENIPWHGVDEWALKEEVNKLINTTLGERETDIIRLYYGLDNECLTWEDISKRI 474
Query: 181 GLSRERVRQVGLVALEKLKHAARKRKLEAMLVKH 282
GLSRERVRQVGLVALEKLKHAAR++++EAMLVKH
Sbjct: 475 GLSRERVRQVGLVALEKLKHAARRKQMEAMLVKH 508
>ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao]
gi|508718371|gb|EOY10268.1| Sigma factor A isoform 1
[Theobroma cacao]
Length = 508
Score = 162 bits (410), Expect = 4e-38
Identities = 79/94 (84%), Positives = 86/94 (91%)
Frame = +1
Query: 1 YIADNRPENNPWNGVDEWLLKDEVNDLISTTLGAREQDIIRLYYGLDKECLTWEDISRRI 180
YIADN EN PW+GVDEW LKDEVN LI+ TLG RE++IIRLYYGLDKE LTWEDIS+RI
Sbjct: 415 YIADNHVENIPWHGVDEWALKDEVNRLITITLGEREREIIRLYYGLDKESLTWEDISKRI 474
Query: 181 GLSRERVRQVGLVALEKLKHAARKRKLEAMLVKH 282
GLSRERVRQVGLVALEKLKHAARK+K+EAMLVKH
Sbjct: 475 GLSRERVRQVGLVALEKLKHAARKKKMEAMLVKH 508
>ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-like isoform 2 [Vitis
vinifera]
Length = 497
Score = 162 bits (410), Expect = 4e-38
Identities = 79/94 (84%), Positives = 87/94 (92%)
Frame = +1
Query: 1 YIADNRPENNPWNGVDEWLLKDEVNDLISTTLGAREQDIIRLYYGLDKECLTWEDISRRI 180
YIAD R ENNPW+GVDEW LKDEVN LI+TTLG RE+DIIRLYYGLD ECLTWEDIS+RI
Sbjct: 404 YIADVRLENNPWHGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTWEDISKRI 463
Query: 181 GLSRERVRQVGLVALEKLKHAARKRKLEAMLVKH 282
GLSRERVRQVGLVALEKLK+AARK ++EAMLVK+
Sbjct: 464 GLSRERVRQVGLVALEKLKNAARKGRMEAMLVKY 497
>emb|CBI26421.3| unnamed protein product [Vitis vinifera]
Length = 555
Score = 162 bits (410), Expect = 4e-38
Identities = 79/94 (84%), Positives = 87/94 (92%)
Frame = +1
Query: 1 YIADNRPENNPWNGVDEWLLKDEVNDLISTTLGAREQDIIRLYYGLDKECLTWEDISRRI 180
YIAD R ENNPW+GVDEW LKDEVN LI+TTLG RE+DIIRLYYGLD ECLTWEDIS+RI
Sbjct: 462 YIADVRLENNPWHGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTWEDISKRI 521
Query: 181 GLSRERVRQVGLVALEKLKHAARKRKLEAMLVKH 282
GLSRERVRQVGLVALEKLK+AARK ++EAMLVK+
Sbjct: 522 GLSRERVRQVGLVALEKLKNAARKGRMEAMLVKY 555
>ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Populus trichocarpa]
gi|550325184|gb|EEE95160.2| hypothetical protein
POPTR_0013s07290g [Populus trichocarpa]
Length = 499
Score = 161 bits (408), Expect = 8e-38
Identities = 78/94 (82%), Positives = 86/94 (91%)
Frame = +1
Query: 1 YIADNRPENNPWNGVDEWLLKDEVNDLISTTLGAREQDIIRLYYGLDKECLTWEDISRRI 180
YIADNR ENNPW+GVDEW LK+EVN LI + L RE++IIRLY+GLDKECLTWEDIS+R+
Sbjct: 406 YIADNRLENNPWHGVDEWALKEEVNKLIDSALQEREREIIRLYHGLDKECLTWEDISKRM 465
Query: 181 GLSRERVRQVGLVALEKLKHAARKRKLEAMLVKH 282
GLSRERVRQVGLVALEKLKHAARK KLEAMLVKH
Sbjct: 466 GLSRERVRQVGLVALEKLKHAARKGKLEAMLVKH 499
>ref|XP_006878659.1| hypothetical protein AMTR_s00011p00266100 [Amborella trichopoda]
gi|548832002|gb|ERM94804.1| hypothetical protein
AMTR_s00011p00266100 [Amborella trichopoda]
Length = 497
Score = 160 bits (406), Expect = 1e-37
Identities = 79/94 (84%), Positives = 85/94 (90%)
Frame = +1
Query: 1 YIADNRPENNPWNGVDEWLLKDEVNDLISTTLGAREQDIIRLYYGLDKECLTWEDISRRI 180
YIADN NNPW+GVDEWLLK EVN LIS+TL REQDIIRLYYGLDKEC TWEDISR+I
Sbjct: 404 YIADNNLMNNPWHGVDEWLLKAEVNKLISSTLAEREQDIIRLYYGLDKECHTWEDISRKI 463
Query: 181 GLSRERVRQVGLVALEKLKHAARKRKLEAMLVKH 282
GLSRERVRQVGLVALEKLK+AAR ++LEAMLVKH
Sbjct: 464 GLSRERVRQVGLVALEKLKNAARNKRLEAMLVKH 497
>ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-like [Solanum
lycopersicum]
Length = 509
Score = 160 bits (406), Expect = 1e-37
Identities = 77/93 (82%), Positives = 86/93 (92%)
Frame = +1
Query: 1 YIADNRPENNPWNGVDEWLLKDEVNDLISTTLGAREQDIIRLYYGLDKECLTWEDISRRI 180
YIADN ENNPW+GVD W LKDEVN+LIS+TL RE++IIRLYYGLD ECLTWEDIS+RI
Sbjct: 416 YIADNHLENNPWHGVDVWALKDEVNNLISSTLREREREIIRLYYGLDSECLTWEDISKRI 475
Query: 181 GLSRERVRQVGLVALEKLKHAARKRKLEAMLVK 279
GLSRERVRQVGLVALEKLKHAARKR+L+AML+K
Sbjct: 476 GLSRERVRQVGLVALEKLKHAARKRRLDAMLIK 508
>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 508
Score = 160 bits (406), Expect = 1e-37
Identities = 79/94 (84%), Positives = 85/94 (90%)
Frame = +1
Query: 1 YIADNRPENNPWNGVDEWLLKDEVNDLISTTLGAREQDIIRLYYGLDKECLTWEDISRRI 180
YIADN ENNPW+GVD+W LKDEVN LI+ TL REQ+IIRLYYGLD E LTWEDIS+RI
Sbjct: 415 YIADNCLENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRI 474
Query: 181 GLSRERVRQVGLVALEKLKHAARKRKLEAMLVKH 282
GLSRERVRQVGLVALEKLKHAARK+KLEAMLVKH
Sbjct: 475 GLSRERVRQVGLVALEKLKHAARKKKLEAMLVKH 508
>dbj|BAA88921.1| sigma factor [Nicotiana tabacum]
Length = 508
Score = 160 bits (404), Expect = 2e-37
Identities = 77/93 (82%), Positives = 86/93 (92%)
Frame = +1
Query: 1 YIADNRPENNPWNGVDEWLLKDEVNDLISTTLGAREQDIIRLYYGLDKECLTWEDISRRI 180
YIADN ENNPW+GVD W LKDEVN+LIS+TL RE++IIRLYYGLD ECLTWEDIS+RI
Sbjct: 415 YIADNHLENNPWHGVDVWALKDEVNNLISSTLRDREREIIRLYYGLDNECLTWEDISKRI 474
Query: 181 GLSRERVRQVGLVALEKLKHAARKRKLEAMLVK 279
GLSRERVRQVGLVALEKLKHAARKR+L+AML+K
Sbjct: 475 GLSRERVRQVGLVALEKLKHAARKRQLDAMLIK 507
>ref|XP_003534364.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1
[Glycine max] gi|571478813|ref|XP_006587676.1|
PREDICTED: RNA polymerase sigma factor sigA-like isoform
X2 [Glycine max]
Length = 503
Score = 159 bits (402), Expect = 4e-37
Identities = 78/94 (82%), Positives = 86/94 (91%)
Frame = +1
Query: 1 YIADNRPENNPWNGVDEWLLKDEVNDLISTTLGAREQDIIRLYYGLDKECLTWEDISRRI 180
YIAD+R EN PWNGVDEW LKDEVN LI+ TL RE++IIRLYYGLDKE LTWEDIS+RI
Sbjct: 410 YIADDRVENIPWNGVDEWALKDEVNKLINVTLVEREREIIRLYYGLDKEGLTWEDISKRI 469
Query: 181 GLSRERVRQVGLVALEKLKHAARKRKLEAMLVKH 282
GLSRERVRQVGLVALEKLKHAARKR++EAML+KH
Sbjct: 470 GLSRERVRQVGLVALEKLKHAARKRQMEAMLLKH 503
>ref|XP_002886771.1| RNA polymerase sigma subunit 1 [Arabidopsis lyrata subsp. lyrata]
gi|297332612|gb|EFH63030.1| RNA polymerase sigma subunit
1 [Arabidopsis lyrata subsp. lyrata]
Length = 503
Score = 158 bits (400), Expect = 6e-37
Identities = 76/94 (80%), Positives = 87/94 (92%)
Frame = +1
Query: 1 YIADNRPENNPWNGVDEWLLKDEVNDLISTTLGAREQDIIRLYYGLDKECLTWEDISRRI 180
YIADNR ENNPW+G D+ LK+EV+ LIS TLG RE++IIRLYYGLDKECLTWEDIS+RI
Sbjct: 410 YIADNRVENNPWHGYDDLALKEEVSKLISATLGEREREIIRLYYGLDKECLTWEDISKRI 469
Query: 181 GLSRERVRQVGLVALEKLKHAARKRKLEAMLVKH 282
GLSRERVRQVGLVALEKLKHAARKRK+EAM++K+
Sbjct: 470 GLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 503
>ref|XP_006302143.1| hypothetical protein CARUB_v10020145mg [Capsella rubella]
gi|482570853|gb|EOA35041.1| hypothetical protein
CARUB_v10020145mg [Capsella rubella]
Length = 521
Score = 158 bits (399), Expect = 8e-37
Identities = 76/94 (80%), Positives = 87/94 (92%)
Frame = +1
Query: 1 YIADNRPENNPWNGVDEWLLKDEVNDLISTTLGAREQDIIRLYYGLDKECLTWEDISRRI 180
YIADNR ENNPW+G DE LK+EV+ LI+ TLG RE++IIRLYYGLDKECLTWEDIS+RI
Sbjct: 428 YIADNRLENNPWHGYDELALKEEVSKLITATLGEREREIIRLYYGLDKECLTWEDISKRI 487
Query: 181 GLSRERVRQVGLVALEKLKHAARKRKLEAMLVKH 282
GLSRERVRQVGLVALEKLKHAARKRK+EAM++K+
Sbjct: 488 GLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 521