BLASTX nr result
ID: Sinomenium22_contig00016000
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00016000
(796 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA95170.1| small nuclear ribonucleoprotein F, putative, expr... 154 4e-35
gb|EEC72605.1| hypothetical protein OsI_06076 [Oryza sativa Indi... 153 8e-35
ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group] g... 152 1e-34
ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group] g... 152 1e-34
gb|AFK45150.1| unknown [Lotus japonicus] 152 2e-34
ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleo... 152 2e-34
ref|XP_003555743.1| PREDICTED: probable small nuclear ribonucleo... 152 2e-34
gb|ACU13643.1| unknown [Glycine max] 152 2e-34
ref|XP_006848141.1| hypothetical protein AMTR_s00029p00226370 [A... 151 2e-34
ref|XP_004951718.1| PREDICTED: probable small nuclear ribonucleo... 151 2e-34
ref|XP_004507856.1| PREDICTED: probable small nuclear ribonucleo... 151 2e-34
ref|XP_003563369.1| PREDICTED: probable small nuclear ribonucleo... 151 2e-34
gb|ABK22541.1| unknown [Picea sitchensis] 151 2e-34
ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleo... 151 3e-34
ref|XP_003570509.1| PREDICTED: probable small nuclear ribonucleo... 150 4e-34
ref|XP_003610112.1| Small nuclear ribonucleoprotein F [Medicago ... 150 4e-34
ref|NP_001151866.1| small nuclear ribonucleoprotein F [Zea mays]... 150 7e-34
ref|NP_001150516.1| small nuclear ribonucleoprotein F [Zea mays]... 150 7e-34
gb|ACG39075.1| small nuclear ribonucleoprotein F [Zea mays] 149 9e-34
ref|XP_007223820.1| hypothetical protein PRUPE_ppa014017mg [Prun... 149 2e-33
>gb|ABA95170.1| small nuclear ribonucleoprotein F, putative, expressed [Oryza
sativa Japonica Group]
Length = 85
Score = 154 bits (389), Expect = 4e-35
Identities = 72/76 (94%), Positives = 76/76 (100%)
Frame = +3
Query: 177 MSVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLG 356
M+VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDG+F+GNLG
Sbjct: 1 MTVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLG 60
Query: 357 EILIRCNNVLYLRGVP 404
EILIRCNNVLYLRGVP
Sbjct: 61 EILIRCNNVLYLRGVP 76
>gb|EEC72605.1| hypothetical protein OsI_06076 [Oryza sativa Indica Group]
gi|222622299|gb|EEE56431.1| hypothetical protein
OsJ_05599 [Oryza sativa Japonica Group]
Length = 146
Score = 153 bits (386), Expect = 8e-35
Identities = 72/81 (88%), Positives = 78/81 (96%)
Frame = +3
Query: 162 KSFNNMSVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKF 341
K + ++VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDG+F
Sbjct: 57 KDNDPVTVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQF 116
Query: 342 TGNLGEILIRCNNVLYLRGVP 404
+GNLGEILIRCNNVLYLRGVP
Sbjct: 117 SGNLGEILIRCNNVLYLRGVP 137
>ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group]
gi|77552372|gb|ABA95169.1| small nuclear
ribonucleoprotein F, putative, expressed [Oryza sativa
Japonica Group] gi|113645618|dbj|BAF28759.1|
Os11g0657300 [Oryza sativa Japonica Group]
gi|215693012|dbj|BAG88432.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218186140|gb|EEC68567.1| hypothetical protein
OsI_36896 [Oryza sativa Indica Group]
gi|222616369|gb|EEE52501.1| hypothetical protein
OsJ_34703 [Oryza sativa Japonica Group]
Length = 86
Score = 152 bits (384), Expect = 1e-34
Identities = 71/75 (94%), Positives = 75/75 (100%)
Frame = +3
Query: 180 SVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLGE 359
+VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDG+F+GNLGE
Sbjct: 3 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGE 62
Query: 360 ILIRCNNVLYLRGVP 404
ILIRCNNVLYLRGVP
Sbjct: 63 ILIRCNNVLYLRGVP 77
>ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group]
gi|573918646|ref|XP_006646960.1| PREDICTED: probable
small nuclear ribonucleoprotein F-like [Oryza
brachyantha] gi|50252055|dbj|BAD27986.1| putative small
nuclear ribonucleoprotein polypeptide F [Oryza sativa
Japonica Group] gi|113535599|dbj|BAF07982.1|
Os02g0177500 [Oryza sativa Japonica Group]
Length = 86
Score = 152 bits (384), Expect = 1e-34
Identities = 71/75 (94%), Positives = 75/75 (100%)
Frame = +3
Query: 180 SVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLGE 359
+VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDG+F+GNLGE
Sbjct: 3 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGE 62
Query: 360 ILIRCNNVLYLRGVP 404
ILIRCNNVLYLRGVP
Sbjct: 63 ILIRCNNVLYLRGVP 77
>gb|AFK45150.1| unknown [Lotus japonicus]
Length = 88
Score = 152 bits (383), Expect = 2e-34
Identities = 70/75 (93%), Positives = 75/75 (100%)
Frame = +3
Query: 180 SVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLGE 359
++PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+G+FTGNLGE
Sbjct: 3 TIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNLGE 62
Query: 360 ILIRCNNVLYLRGVP 404
ILIRCNNVLYLRGVP
Sbjct: 63 ILIRCNNVLYLRGVP 77
>ref|XP_003549441.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
gi|593783443|ref|XP_007154762.1| hypothetical protein
PHAVU_003G145500g [Phaseolus vulgaris]
gi|561028116|gb|ESW26756.1| hypothetical protein
PHAVU_003G145500g [Phaseolus vulgaris]
Length = 88
Score = 152 bits (383), Expect = 2e-34
Identities = 70/75 (93%), Positives = 75/75 (100%)
Frame = +3
Query: 180 SVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLGE 359
++PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+G+FTGNLGE
Sbjct: 3 TIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNLGE 62
Query: 360 ILIRCNNVLYLRGVP 404
ILIRCNNVLYLRGVP
Sbjct: 63 ILIRCNNVLYLRGVP 77
>ref|XP_003555743.1| PREDICTED: probable small nuclear ribonucleoprotein F [Glycine max]
gi|255628071|gb|ACU14380.1| unknown [Glycine max]
Length = 88
Score = 152 bits (383), Expect = 2e-34
Identities = 70/75 (93%), Positives = 75/75 (100%)
Frame = +3
Query: 180 SVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLGE 359
++PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+G+FTGNLGE
Sbjct: 3 TIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNLGE 62
Query: 360 ILIRCNNVLYLRGVP 404
ILIRCNNVLYLRGVP
Sbjct: 63 ILIRCNNVLYLRGVP 77
>gb|ACU13643.1| unknown [Glycine max]
Length = 88
Score = 152 bits (383), Expect = 2e-34
Identities = 70/75 (93%), Positives = 75/75 (100%)
Frame = +3
Query: 180 SVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLGE 359
++PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+G+FTGNLGE
Sbjct: 3 TIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGQFTGNLGE 62
Query: 360 ILIRCNNVLYLRGVP 404
ILIRCNNVLYLRGVP
Sbjct: 63 ILIRCNNVLYLRGVP 77
>ref|XP_006848141.1| hypothetical protein AMTR_s00029p00226370 [Amborella trichopoda]
gi|548851446|gb|ERN09722.1| hypothetical protein
AMTR_s00029p00226370 [Amborella trichopoda]
Length = 86
Score = 151 bits (382), Expect = 2e-34
Identities = 71/75 (94%), Positives = 74/75 (98%)
Frame = +3
Query: 180 SVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLGE 359
+VPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDG+ +GNLGE
Sbjct: 3 TVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQLSGNLGE 62
Query: 360 ILIRCNNVLYLRGVP 404
ILIRCNNVLYLRGVP
Sbjct: 63 ILIRCNNVLYLRGVP 77
>ref|XP_004951718.1| PREDICTED: probable small nuclear ribonucleoprotein F-like [Setaria
italica] gi|514709230|ref|XP_004951733.1| PREDICTED:
probable small nuclear ribonucleoprotein F-like [Setaria
italica]
Length = 86
Score = 151 bits (382), Expect = 2e-34
Identities = 70/75 (93%), Positives = 75/75 (100%)
Frame = +3
Query: 180 SVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLGE 359
+VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDG+F+GNLGE
Sbjct: 3 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGE 62
Query: 360 ILIRCNNVLYLRGVP 404
ILIRCNNV+YLRGVP
Sbjct: 63 ILIRCNNVMYLRGVP 77
>ref|XP_004507856.1| PREDICTED: probable small nuclear ribonucleoprotein F-like [Cicer
arietinum]
Length = 88
Score = 151 bits (382), Expect = 2e-34
Identities = 70/75 (93%), Positives = 74/75 (98%)
Frame = +3
Query: 180 SVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLGE 359
++PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+G FTGNLGE
Sbjct: 3 TIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGSFTGNLGE 62
Query: 360 ILIRCNNVLYLRGVP 404
ILIRCNNVLYLRGVP
Sbjct: 63 ILIRCNNVLYLRGVP 77
>ref|XP_003563369.1| PREDICTED: probable small nuclear ribonucleoprotein F-like
[Brachypodium distachyon]
Length = 86
Score = 151 bits (382), Expect = 2e-34
Identities = 70/75 (93%), Positives = 75/75 (100%)
Frame = +3
Query: 180 SVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLGE 359
+VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDG+F+GNLGE
Sbjct: 3 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGE 62
Query: 360 ILIRCNNVLYLRGVP 404
ILIRCNNV+YLRGVP
Sbjct: 63 ILIRCNNVMYLRGVP 77
>gb|ABK22541.1| unknown [Picea sitchensis]
Length = 84
Score = 151 bits (382), Expect = 2e-34
Identities = 70/75 (93%), Positives = 75/75 (100%)
Frame = +3
Query: 180 SVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLGE 359
+VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLA+TEEYIDG+FTGNLGE
Sbjct: 3 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLASTEEYIDGQFTGNLGE 62
Query: 360 ILIRCNNVLYLRGVP 404
+LIRCNNVLYLRGVP
Sbjct: 63 VLIRCNNVLYLRGVP 77
>ref|XP_002272246.1| PREDICTED: probable small nuclear ribonucleoprotein F [Vitis
vinifera] gi|296083390|emb|CBI23345.3| unnamed protein
product [Vitis vinifera]
Length = 88
Score = 151 bits (381), Expect = 3e-34
Identities = 70/75 (93%), Positives = 75/75 (100%)
Frame = +3
Query: 180 SVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLGE 359
+VP+NPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLAN+EEYIDG+FTGNLGE
Sbjct: 3 TVPLNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANSEEYIDGQFTGNLGE 62
Query: 360 ILIRCNNVLYLRGVP 404
ILIRCNNVLYLRGVP
Sbjct: 63 ILIRCNNVLYLRGVP 77
>ref|XP_003570509.1| PREDICTED: probable small nuclear ribonucleoprotein F-like
[Brachypodium distachyon]
Length = 86
Score = 150 bits (380), Expect = 4e-34
Identities = 69/75 (92%), Positives = 75/75 (100%)
Frame = +3
Query: 180 SVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLGE 359
+VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDG+F+GNLGE
Sbjct: 3 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGQFSGNLGE 62
Query: 360 ILIRCNNVLYLRGVP 404
ILIRCNNV+Y+RGVP
Sbjct: 63 ILIRCNNVMYMRGVP 77
>ref|XP_003610112.1| Small nuclear ribonucleoprotein F [Medicago truncatula]
gi|355511167|gb|AES92309.1| Small nuclear
ribonucleoprotein F [Medicago truncatula]
gi|388505566|gb|AFK40849.1| unknown [Medicago
truncatula]
Length = 88
Score = 150 bits (380), Expect = 4e-34
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = +3
Query: 180 SVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLGE 359
++PVNPKPFLNNLTGKPV+VKLKWGMEYKGYLVSVDSYMNLQLANTEEYI+G FTGNLGE
Sbjct: 3 TIPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIEGNFTGNLGE 62
Query: 360 ILIRCNNVLYLRGVP 404
ILIRCNNVLY+RGVP
Sbjct: 63 ILIRCNNVLYMRGVP 77
>ref|NP_001151866.1| small nuclear ribonucleoprotein F [Zea mays]
gi|195650409|gb|ACG44672.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413935831|gb|AFW70382.1| small nuclear
ribonucleoprotein F [Zea mays]
Length = 107
Score = 150 bits (378), Expect = 7e-34
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = +3
Query: 180 SVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLGE 359
+VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYL SVDSYMNLQLANTEEYIDG+F+GNLGE
Sbjct: 24 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNLGE 83
Query: 360 ILIRCNNVLYLRGVP 404
ILIRCNNV+YLRGVP
Sbjct: 84 ILIRCNNVMYLRGVP 98
>ref|NP_001150516.1| small nuclear ribonucleoprotein F [Zea mays]
gi|194696080|gb|ACF82124.1| unknown [Zea mays]
gi|195609436|gb|ACG26548.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|195622854|gb|ACG33257.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|195639814|gb|ACG39375.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413926377|gb|AFW66309.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413935832|gb|AFW70383.1| small nuclear
ribonucleoprotein F [Zea mays]
gi|413935833|gb|AFW70384.1| small nuclear
ribonucleoprotein F [Zea mays]
Length = 86
Score = 150 bits (378), Expect = 7e-34
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = +3
Query: 180 SVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLGE 359
+VPVNPKPFLNNLTGKPV+VKLKWGMEYKGYL SVDSYMNLQLANTEEYIDG+F+GNLGE
Sbjct: 3 TVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNLGE 62
Query: 360 ILIRCNNVLYLRGVP 404
ILIRCNNV+YLRGVP
Sbjct: 63 ILIRCNNVMYLRGVP 77
>gb|ACG39075.1| small nuclear ribonucleoprotein F [Zea mays]
Length = 86
Score = 149 bits (377), Expect = 9e-34
Identities = 68/75 (90%), Positives = 74/75 (98%)
Frame = +3
Query: 180 SVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLGE 359
+VPVNPKPFLNNLTGKP++VKLKWGMEYKGYL SVDSYMNLQLANTEEYIDG+F+GNLGE
Sbjct: 3 TVPVNPKPFLNNLTGKPIIVKLKWGMEYKGYLASVDSYMNLQLANTEEYIDGQFSGNLGE 62
Query: 360 ILIRCNNVLYLRGVP 404
ILIRCNNV+YLRGVP
Sbjct: 63 ILIRCNNVMYLRGVP 77
>ref|XP_007223820.1| hypothetical protein PRUPE_ppa014017mg [Prunus persica]
gi|462420756|gb|EMJ25019.1| hypothetical protein
PRUPE_ppa014017mg [Prunus persica]
Length = 91
Score = 149 bits (375), Expect = 2e-33
Identities = 69/75 (92%), Positives = 74/75 (98%)
Frame = +3
Query: 180 SVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANTEEYIDGKFTGNLGE 359
++PVNPKPFLNNLTGK V+VKLKWGMEYKG+LVSVDSYMNLQLANTEEYIDG+FTGNLGE
Sbjct: 3 TIPVNPKPFLNNLTGKTVIVKLKWGMEYKGFLVSVDSYMNLQLANTEEYIDGQFTGNLGE 62
Query: 360 ILIRCNNVLYLRGVP 404
ILIRCNNVLYLRGVP
Sbjct: 63 ILIRCNNVLYLRGVP 77