BLASTX nr result
ID: Sinomenium22_contig00015210
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Sinomenium22_contig00015210 (364 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_008993254.1| RNA polymerase beta subunit (chloroplast) [M... 182 3e-44 gb|AHE41617.1| RNA polymerase beta subunit protein (chloroplast)... 182 6e-44 ref|YP_008993856.1| RNA polymerase beta subunit (chloroplast) [M... 181 7e-44 ref|YP_008993770.1| RNA polymerase beta subunit (chloroplast) [M... 181 7e-44 ref|YP_008993598.1| RNA polymerase beta subunit (chloroplast) [M... 181 7e-44 ref|YP_008993512.1| RNA polymerase beta subunit (chloroplast) [M... 181 7e-44 ref|YP_008993426.1| RNA polymerase beta subunit (chloroplast) [M... 181 7e-44 ref|YP_008993168.1| RNA polymerase beta subunit (chloroplast) [M... 181 7e-44 ref|YP_007474362.1| RNA polymerase beta subunit (chloroplast) [M... 181 7e-44 gb|AEX98243.1| RNA polymerase beta subunit (chloroplast) [Magnol... 181 7e-44 ref|YP_006576107.1| RpoB (chloroplast) [Magnolia denudata] gi|34... 181 7e-44 ref|YP_004769706.1| RNA polymerase beta subunit [Magnolia kwangs... 181 7e-44 ref|YP_007474528.1| RNA polymerase beta subunit (chloroplast) [M... 181 1e-43 ref|YP_009026873.1| RNA polymerase beta subunit [Magnolia tripet... 180 2e-43 ref|YP_008993684.1| RNA polymerase beta subunit (chloroplast) [M... 179 3e-43 gb|AHE41627.1| RNA polymerase beta subunit protein, partial (chl... 179 4e-43 gb|AHE41626.1| RNA polymerase beta subunit protein, partial (chl... 179 4e-43 gb|AHE41622.1| RNA polymerase beta subunit protein, partial (chl... 179 4e-43 gb|ADD31205.1| RNA polymerase beta subunit protein [Liquidambar ... 179 4e-43 sp|Q0G9M7.2|RPOB_LIRTU RecName: Full=DNA-directed RNA polymerase... 179 5e-43 >ref|YP_008993254.1| RNA polymerase beta subunit (chloroplast) [Magnolia dealbata] gi|570759917|ref|YP_008993340.1| RNA polymerase beta subunit (chloroplast) [Magnolia pyramidata] Length = 1079 Score = 182 bits (463), Expect = 3e-44 Identities = 90/95 (94%), Positives = 92/95 (96%) Frame = -3 Query: 287 LLVVADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALGRLENAVRGTICGAIR 108 +L ADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLAL RLENAVRGTICGAIR Sbjct: 295 VLAAADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIR 354 Query: 107 HKLMPTPQNLVTSTPVTTTYESFFGLHPLSQVLDR 3 HKL+PTPQNLVTSTPVTTTYESFFGLHPLSQVLDR Sbjct: 355 HKLIPTPQNLVTSTPVTTTYESFFGLHPLSQVLDR 389 >gb|AHE41617.1| RNA polymerase beta subunit protein (chloroplast) [Hamamelis mollis] Length = 1070 Score = 182 bits (461), Expect = 6e-44 Identities = 89/95 (93%), Positives = 92/95 (96%) Frame = -3 Query: 287 LLVVADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALGRLENAVRGTICGAIR 108 +L ADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLAL RLENAVRGTICGAIR Sbjct: 286 ILAAADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIR 345 Query: 107 HKLMPTPQNLVTSTPVTTTYESFFGLHPLSQVLDR 3 HKL+PTPQNLVTSTP+TTTYESFFGLHPLSQVLDR Sbjct: 346 HKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDR 380 >ref|YP_008993856.1| RNA polymerase beta subunit (chloroplast) [Magnolia sprengeri] Length = 1079 Score = 181 bits (460), Expect = 7e-44 Identities = 89/95 (93%), Positives = 92/95 (96%) Frame = -3 Query: 287 LLVVADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALGRLENAVRGTICGAIR 108 +L ADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLAL RLENAVRGTICGAIR Sbjct: 295 VLAAADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIR 354 Query: 107 HKLMPTPQNLVTSTPVTTTYESFFGLHPLSQVLDR 3 HKL+PTPQNLVTSTP+TTTYESFFGLHPLSQVLDR Sbjct: 355 HKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDR 389 >ref|YP_008993770.1| RNA polymerase beta subunit (chloroplast) [Magnolia sinica] Length = 1079 Score = 181 bits (460), Expect = 7e-44 Identities = 89/95 (93%), Positives = 92/95 (96%) Frame = -3 Query: 287 LLVVADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALGRLENAVRGTICGAIR 108 +L ADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLAL RLENAVRGTICGAIR Sbjct: 295 VLAAADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIR 354 Query: 107 HKLMPTPQNLVTSTPVTTTYESFFGLHPLSQVLDR 3 HKL+PTPQNLVTSTP+TTTYESFFGLHPLSQVLDR Sbjct: 355 HKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDR 389 >ref|YP_008993598.1| RNA polymerase beta subunit (chloroplast) [Magnolia odora] Length = 1079 Score = 181 bits (460), Expect = 7e-44 Identities = 89/95 (93%), Positives = 92/95 (96%) Frame = -3 Query: 287 LLVVADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALGRLENAVRGTICGAIR 108 +L ADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLAL RLENAVRGTICGAIR Sbjct: 295 VLAAADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIR 354 Query: 107 HKLMPTPQNLVTSTPVTTTYESFFGLHPLSQVLDR 3 HKL+PTPQNLVTSTP+TTTYESFFGLHPLSQVLDR Sbjct: 355 HKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDR 389 >ref|YP_008993512.1| RNA polymerase beta subunit (chloroplast) [Magnolia liliifera] Length = 1079 Score = 181 bits (460), Expect = 7e-44 Identities = 89/95 (93%), Positives = 92/95 (96%) Frame = -3 Query: 287 LLVVADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALGRLENAVRGTICGAIR 108 +L ADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLAL RLENAVRGTICGAIR Sbjct: 295 VLAAADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIR 354 Query: 107 HKLMPTPQNLVTSTPVTTTYESFFGLHPLSQVLDR 3 HKL+PTPQNLVTSTP+TTTYESFFGLHPLSQVLDR Sbjct: 355 HKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDR 389 >ref|YP_008993426.1| RNA polymerase beta subunit (chloroplast) [Magnolia kobus] Length = 1079 Score = 181 bits (460), Expect = 7e-44 Identities = 89/95 (93%), Positives = 92/95 (96%) Frame = -3 Query: 287 LLVVADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALGRLENAVRGTICGAIR 108 +L ADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLAL RLENAVRGTICGAIR Sbjct: 295 VLAAADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIR 354 Query: 107 HKLMPTPQNLVTSTPVTTTYESFFGLHPLSQVLDR 3 HKL+PTPQNLVTSTP+TTTYESFFGLHPLSQVLDR Sbjct: 355 HKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDR 389 >ref|YP_008993168.1| RNA polymerase beta subunit (chloroplast) [Magnolia cathcartii] Length = 1079 Score = 181 bits (460), Expect = 7e-44 Identities = 89/95 (93%), Positives = 92/95 (96%) Frame = -3 Query: 287 LLVVADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALGRLENAVRGTICGAIR 108 +L ADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLAL RLENAVRGTICGAIR Sbjct: 295 VLAAADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIR 354 Query: 107 HKLMPTPQNLVTSTPVTTTYESFFGLHPLSQVLDR 3 HKL+PTPQNLVTSTP+TTTYESFFGLHPLSQVLDR Sbjct: 355 HKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDR 389 >ref|YP_007474362.1| RNA polymerase beta subunit (chloroplast) [Magnolia officinalis] gi|452848763|ref|YP_007474444.1| RNA polymerase beta subunit (chloroplast) [Magnolia officinalis subsp. biloba] gi|372862413|gb|AEX98494.1| RNA polymerase beta subunit (chloroplast) [Magnolia officinalis] gi|372862496|gb|AEX98576.1| RNA polymerase beta subunit (chloroplast) [Magnolia officinalis subsp. biloba] gi|372862581|gb|AEX98660.1| RNA polymerase beta subunit (chloroplast) [Magnolia officinalis subsp. biloba] gi|372862666|gb|AEX98744.1| RNA polymerase beta subunit (chloroplast) [Magnolia officinalis subsp. biloba] Length = 1079 Score = 181 bits (460), Expect = 7e-44 Identities = 89/95 (93%), Positives = 92/95 (96%) Frame = -3 Query: 287 LLVVADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALGRLENAVRGTICGAIR 108 +L ADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLAL RLENAVRGTICGAIR Sbjct: 295 VLAAADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIR 354 Query: 107 HKLMPTPQNLVTSTPVTTTYESFFGLHPLSQVLDR 3 HKL+PTPQNLVTSTP+TTTYESFFGLHPLSQVLDR Sbjct: 355 HKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDR 389 >gb|AEX98243.1| RNA polymerase beta subunit (chloroplast) [Magnolia liliiflora] Length = 1079 Score = 181 bits (460), Expect = 7e-44 Identities = 89/95 (93%), Positives = 92/95 (96%) Frame = -3 Query: 287 LLVVADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALGRLENAVRGTICGAIR 108 +L ADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLAL RLENAVRGTICGAIR Sbjct: 295 VLAAADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIR 354 Query: 107 HKLMPTPQNLVTSTPVTTTYESFFGLHPLSQVLDR 3 HKL+PTPQNLVTSTP+TTTYESFFGLHPLSQVLDR Sbjct: 355 HKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDR 389 >ref|YP_006576107.1| RpoB (chloroplast) [Magnolia denudata] gi|343887531|gb|AEM65210.1| RpoB [Magnolia denudata] gi|372862243|gb|AEX98326.1| RNA polymerase beta subunit (chloroplast) [Magnolia denudata] Length = 1079 Score = 181 bits (460), Expect = 7e-44 Identities = 89/95 (93%), Positives = 92/95 (96%) Frame = -3 Query: 287 LLVVADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALGRLENAVRGTICGAIR 108 +L ADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLAL RLENAVRGTICGAIR Sbjct: 295 VLAAADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIR 354 Query: 107 HKLMPTPQNLVTSTPVTTTYESFFGLHPLSQVLDR 3 HKL+PTPQNLVTSTP+TTTYESFFGLHPLSQVLDR Sbjct: 355 HKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDR 389 >ref|YP_004769706.1| RNA polymerase beta subunit [Magnolia kwangsiensis] gi|302424172|gb|ADL39048.1| RNA polymerase beta subunit [Magnolia kwangsiensis] Length = 1079 Score = 181 bits (460), Expect = 7e-44 Identities = 89/95 (93%), Positives = 92/95 (96%) Frame = -3 Query: 287 LLVVADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALGRLENAVRGTICGAIR 108 +L ADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLAL RLENAVRGTICGAIR Sbjct: 295 VLAAADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIR 354 Query: 107 HKLMPTPQNLVTSTPVTTTYESFFGLHPLSQVLDR 3 HKL+PTPQNLVTSTP+TTTYESFFGLHPLSQVLDR Sbjct: 355 HKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDR 389 >ref|YP_007474528.1| RNA polymerase beta subunit (chloroplast) [Magnolia grandiflora] gi|372862835|gb|AEX98911.1| RNA polymerase beta subunit (chloroplast) [Magnolia grandiflora] gi|372863005|gb|AEX99079.1| RNA polymerase beta subunit (chloroplast) [Magnolia grandiflora] Length = 1079 Score = 181 bits (458), Expect = 1e-43 Identities = 89/95 (93%), Positives = 92/95 (96%) Frame = -3 Query: 287 LLVVADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALGRLENAVRGTICGAIR 108 +L ADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLAL RLENAVRGTICGAIR Sbjct: 295 VLSAADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIR 354 Query: 107 HKLMPTPQNLVTSTPVTTTYESFFGLHPLSQVLDR 3 HKL+PTPQNLVTSTP+TTTYESFFGLHPLSQVLDR Sbjct: 355 HKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDR 389 >ref|YP_009026873.1| RNA polymerase beta subunit [Magnolia tripetala] gi|608608396|gb|AHW51950.1| RNA polymerase beta subunit [Magnolia tripetala] Length = 1079 Score = 180 bits (456), Expect = 2e-43 Identities = 88/95 (92%), Positives = 92/95 (96%) Frame = -3 Query: 287 LLVVADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALGRLENAVRGTICGAIR 108 +L ADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLAL RLENAVRGTICGAIR Sbjct: 295 VLAAADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIR 354 Query: 107 HKLMPTPQNLVTSTPVTTTYESFFGLHPLSQVLDR 3 HKL+PTPQNLVTSTP+T+TYESFFGLHPLSQVLDR Sbjct: 355 HKLIPTPQNLVTSTPLTSTYESFFGLHPLSQVLDR 389 >ref|YP_008993684.1| RNA polymerase beta subunit (chloroplast) [Magnolia salicifolia] Length = 1079 Score = 179 bits (455), Expect = 3e-43 Identities = 88/95 (92%), Positives = 91/95 (95%) Frame = -3 Query: 287 LLVVADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALGRLENAVRGTICGAIR 108 +L ADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLAL RLENAVRGTICGAIR Sbjct: 295 VLAAADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIR 354 Query: 107 HKLMPTPQNLVTSTPVTTTYESFFGLHPLSQVLDR 3 HKL+PTP NLVTSTP+TTTYESFFGLHPLSQVLDR Sbjct: 355 HKLIPTPHNLVTSTPLTTTYESFFGLHPLSQVLDR 389 >gb|AHE41627.1| RNA polymerase beta subunit protein, partial (chloroplast) [Mytilaria laosensis] Length = 793 Score = 179 bits (454), Expect = 4e-43 Identities = 88/95 (92%), Positives = 91/95 (95%) Frame = -3 Query: 287 LLVVADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALGRLENAVRGTICGAIR 108 +L ADHLI MKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLAL RLENAVRGTICGAIR Sbjct: 269 ILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIR 328 Query: 107 HKLMPTPQNLVTSTPVTTTYESFFGLHPLSQVLDR 3 HKL+PTPQNLVTSTP+TTTYESFFGLHPLSQVLDR Sbjct: 329 HKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDR 363 >gb|AHE41626.1| RNA polymerase beta subunit protein, partial (chloroplast) [Kalanchoe laciniata] Length = 796 Score = 179 bits (454), Expect = 4e-43 Identities = 87/95 (91%), Positives = 90/95 (94%) Frame = -3 Query: 287 LLVVADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALGRLENAVRGTICGAIR 108 +L ADHLI MKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLAL RLEN VRGTICGAIR Sbjct: 270 ILAAADHLIAMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALARLENVVRGTICGAIR 329 Query: 107 HKLMPTPQNLVTSTPVTTTYESFFGLHPLSQVLDR 3 HKL+PTPQNLVTSTP+TTTYESFFGLHPLSQVLDR Sbjct: 330 HKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDR 364 >gb|AHE41622.1| RNA polymerase beta subunit protein, partial (chloroplast) [Cercidiphyllum japonicum] Length = 520 Score = 179 bits (454), Expect = 4e-43 Identities = 88/95 (92%), Positives = 91/95 (95%) Frame = -3 Query: 287 LLVVADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALGRLENAVRGTICGAIR 108 +L ADHLI MKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLAL RLENAVRGTICGAIR Sbjct: 269 ILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIR 328 Query: 107 HKLMPTPQNLVTSTPVTTTYESFFGLHPLSQVLDR 3 HKL+PTPQNLVTSTP+TTTYESFFGLHPLSQVLDR Sbjct: 329 HKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDR 363 >gb|ADD31205.1| RNA polymerase beta subunit protein [Liquidambar styraciflua] Length = 1070 Score = 179 bits (454), Expect = 4e-43 Identities = 88/95 (92%), Positives = 91/95 (95%) Frame = -3 Query: 287 LLVVADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALGRLENAVRGTICGAIR 108 +L ADHLI MKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLAL RLENAVRGTICGAIR Sbjct: 286 ILAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIR 345 Query: 107 HKLMPTPQNLVTSTPVTTTYESFFGLHPLSQVLDR 3 HKL+PTPQNLVTSTP+TTTYESFFGLHPLSQVLDR Sbjct: 346 HKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDR 380 >sp|Q0G9M7.2|RPOB_LIRTU RecName: Full=DNA-directed RNA polymerase subunit beta; AltName: Full=PEP; AltName: Full=Plastid-encoded RNA polymerase subunit beta; Short=RNA polymerase subunit beta Length = 1070 Score = 179 bits (453), Expect = 5e-43 Identities = 88/95 (92%), Positives = 91/95 (95%) Frame = -3 Query: 287 LLVVADHLIRMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALGRLENAVRGTICGAIR 108 +L ADHLI MKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLAL RLENAVRGTICGAIR Sbjct: 286 VLAAADHLIGMKFGMGTLDDMNHLKNKRIRSVADLLQDQFGLALVRLENAVRGTICGAIR 345 Query: 107 HKLMPTPQNLVTSTPVTTTYESFFGLHPLSQVLDR 3 HKL+PTPQNLVTSTP+TTTYESFFGLHPLSQVLDR Sbjct: 346 HKLIPTPQNLVTSTPLTTTYESFFGLHPLSQVLDR 380