BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00015078
         (615 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prun...   120   3e-25
emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]   100   3e-19
ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron sp...   100   4e-19
ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp...    99   1e-18
ref|XP_007034977.1| CRM family member 3A isoform 4 [Theobroma ca...    94   2e-17
ref|XP_007034976.1| CRM family member 3A isoform 3 [Theobroma ca...    94   2e-17
ref|XP_007034975.1| CRM family member 3A isoform 2 [Theobroma ca...    94   2e-17
ref|XP_007034974.1| CRM family member 3A isoform 1 [Theobroma ca...    94   2e-17
gb|EXB29861.1| Chloroplastic group IIA intron splicing facilitat...    94   3e-17
ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Popu...    86   7e-15
ref|XP_006420115.1| hypothetical protein CICLE_v10004262mg [Citr...    80   4e-13
ref|XP_006420114.1| hypothetical protein CICLE_v10004262mg [Citr...    80   4e-13
ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron sp...    79   8e-13
ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron sp...    76   7e-12
ref|XP_004495335.1| PREDICTED: chloroplastic group IIA intron sp...    74   4e-11
ref|XP_006838849.1| hypothetical protein AMTR_s00002p00265220 [A...    72   1e-10
gb|EPS65975.1| hypothetical protein M569_08800, partial [Genlise...    63   6e-08
ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron sp...    63   6e-08
ref|NP_188947.2| CRM family member 3A [Arabidopsis thaliana] gi|...    63   6e-08
dbj|BAE98956.1| hypothetical protein [Arabidopsis thaliana]            63   6e-08

>ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prunus persica]
           gi|462423956|gb|EMJ28219.1| hypothetical protein
           PRUPE_ppa001134mg [Prunus persica]
          Length = 899

 Score =  120 bits (301), Expect = 3e-25
 Identities = 74/184 (40%), Positives = 96/184 (52%), Gaps = 10/184 (5%)
 Frame = -3

Query: 523 MSLVPSCQICQTSFLDSFQNSLSKLHAVRFHLLRYGSSNSPRKHNFSVTQNTIRSDFTPG 344
           M+LVPS Q+  TS  DSFQ+S SK H    HL R GSS   +KH F  T  TI S   P 
Sbjct: 1   MTLVPSRQLYPTSLFDSFQSSFSKFHGPHIHLFRCGSSIPFKKHTFYATHYTISSTLNPE 60

Query: 343 KYPQRXXXXXXXXXXND--------GCRNWIDKWSEDYQPKLPKRPQAVLDYRNSD--DE 194
           + P R                       +WIDKW+E ++   PK P+AVLDY++S+  + 
Sbjct: 61  QNPLRKSNFVRKNQPISQYKPKKNFSSSSWIDKWNESHKHNRPKPPRAVLDYQSSESGNL 120

Query: 193 MXXXXXXXXXXXXXXXXXXTMEKIVEKLKRFGYIDEANEKMESMPNSNSSSVLERGSVED 14
                              TMEKIVEKLK+FGY+D++NE    +      SV+E+GSVED
Sbjct: 121 SGSGYAEGDGGGGRNSSGSTMEKIVEKLKKFGYVDDSNENKGEV----RDSVIEKGSVED 176

Query: 13  IFYV 2
           IFY+
Sbjct: 177 IFYI 180


>emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
          Length = 902

 Score =  100 bits (250), Expect = 3e-19
 Identities = 68/182 (37%), Positives = 91/182 (50%), Gaps = 8/182 (4%)
 Frame = -3

Query: 523 MSLVPSCQI--CQTSFLDSFQNSLSKLHAVRFHLLRYGSSNSPRKHNFSVTQNTIRSDFT 350
           M+L+PS Q     TSFLDSF       H+ R    RYGSSN  R H+  VT+NTI S+ T
Sbjct: 1   MALLPSRQFYPTTTSFLDSF-------HSTRLQFFRYGSSNRFRTHSSYVTRNTIASNST 53

Query: 349 PGKYPQRXXXXXXXXXXND------GCRNWIDKWSEDYQPKLPKRPQAVLDYRNSDDEMX 188
             +               D         NWIDKW+  +Q   PK  + V++YRNS+    
Sbjct: 54  NPQRKSNIVFTNTPVSQYDSGGVSSSGGNWIDKWNGPHQKSHPKEXRPVMNYRNSE---- 109

Query: 187 XXXXXXXXXXXXXXXXXTMEKIVEKLKRFGYIDEANEKMESMPNSNSSSVLERGSVEDIF 8
                            TMEKIVEKLK+FGY+D+  E  E++       ++E+GS+EDIF
Sbjct: 110 ----TVSRSDGGSGGGSTMEKIVEKLKKFGYMDDVKETKENV----QERIIEKGSIEDIF 161

Query: 7   YV 2
           Y+
Sbjct: 162 YI 163


>ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 852

 Score =  100 bits (248), Expect = 4e-19
 Identities = 72/178 (40%), Positives = 94/178 (52%), Gaps = 4/178 (2%)
 Frame = -3

Query: 523 MSLVPSCQICQTSFLDSFQNSLSKLHAVRFHLLRYGSSNSPRKHNFSVTQNTIRSDFTPG 344
           M+LVPS Q+  TS L+S   SLSK H   FHL RY SS   +K +F  TQ  I S  TP 
Sbjct: 1   MTLVPSRQLYPTSLLES---SLSKFHGTHFHLFRY-SSIPFKKQSFHATQYFITSSLTPE 56

Query: 343 KYPQRXXXXXXXXXXN----DGCRNWIDKWSEDYQPKLPKRPQAVLDYRNSDDEMXXXXX 176
           + P R                 C +WID+W++  +   P+RP+AVLDY++++        
Sbjct: 57  QNPPRKLNLLICQYKPTKNLSSC-SWIDRWNDSRKQHGPRRPRAVLDYQSNES------- 108

Query: 175 XXXXXXXXXXXXXTMEKIVEKLKRFGYIDEANEKMESMPNSNSSSVLERGSVEDIFYV 2
                        TM+KIVEKLK+FGYI  A +K E         V+E+GSVEDIFYV
Sbjct: 109 -GNLSSDGNDGGSTMDKIVEKLKKFGYI--AEDKNEGR-GEVRERVIEKGSVEDIFYV 162


>ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Vitis vinifera]
           gi|297737163|emb|CBI26364.3| unnamed protein product
           [Vitis vinifera]
          Length = 902

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 67/182 (36%), Positives = 90/182 (49%), Gaps = 8/182 (4%)
 Frame = -3

Query: 523 MSLVPSCQI--CQTSFLDSFQNSLSKLHAVRFHLLRYGSSNSPRKHNFSVTQNTIRSDFT 350
           M+L+PS Q     TSFLDSF       H+ R    RYGSSN  R H+  V +NTI S+ T
Sbjct: 1   MALLPSRQFYPTTTSFLDSF-------HSTRLQFFRYGSSNRFRTHSSYVARNTIASNST 53

Query: 349 PGKYPQRXXXXXXXXXXNDGCR------NWIDKWSEDYQPKLPKRPQAVLDYRNSDDEMX 188
             +               D         NWIDKW+  +Q   PK  + V++YRNS+    
Sbjct: 54  NPQRKSNIVFTNTPVSQYDSGGVSSSGGNWIDKWNGPHQKSHPKESRPVMNYRNSE---- 109

Query: 187 XXXXXXXXXXXXXXXXXTMEKIVEKLKRFGYIDEANEKMESMPNSNSSSVLERGSVEDIF 8
                            TMEKIVEKLK+FGY+D+  E  E++       ++E+GS+EDIF
Sbjct: 110 ----TVSRSDGGSGGGSTMEKIVEKLKKFGYMDDVKETKENV----QERIIEKGSIEDIF 161

Query: 7   YV 2
           Y+
Sbjct: 162 YI 163


>ref|XP_007034977.1| CRM family member 3A isoform 4 [Theobroma cacao]
           gi|508714006|gb|EOY05903.1| CRM family member 3A isoform
           4 [Theobroma cacao]
          Length = 645

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 66/188 (35%), Positives = 91/188 (48%), Gaps = 14/188 (7%)
 Frame = -3

Query: 523 MSLVPSCQI-----CQTSFLDSFQNSLSKLHAVRFHLLRYGSSNSPRKH------NFSVT 377
           M+L+P+ Q       +++FLDSFQ  LSK H +      Y SSN P K       N++VT
Sbjct: 1   MTLLPTRQFHPATTTKSTFLDSFQTRLSKFHGLPLPFCSYDSSNFPLKTSTLYAANYTVT 60

Query: 376 QNTIRSDFTPGK---YPQRXXXXXXXXXXNDGCRNWIDKWSEDYQPKLPKRPQAVLDYRN 206
            N++   +   K   +P +               NW+D W++ ++   PK P+ V +YR 
Sbjct: 61  SNSLFHQYPKSKTKAFPTKDPTFRS---------NWLDSWNKTHKGFGPKPPKTVFNYRK 111

Query: 205 SDDEMXXXXXXXXXXXXXXXXXXTMEKIVEKLKRFGYIDEANEKMESMPNSNSSSVLERG 26
             D                    TMEKIVEKLK+FGYI E NE+ E         V+ERG
Sbjct: 112 KGD--VWSLSYSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEK-GEEEPKRVIERG 168

Query: 25  SVEDIFYV 2
           S+EDIFYV
Sbjct: 169 SIEDIFYV 176


>ref|XP_007034976.1| CRM family member 3A isoform 3 [Theobroma cacao]
           gi|508714005|gb|EOY05902.1| CRM family member 3A isoform
           3 [Theobroma cacao]
          Length = 856

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 66/188 (35%), Positives = 91/188 (48%), Gaps = 14/188 (7%)
 Frame = -3

Query: 523 MSLVPSCQI-----CQTSFLDSFQNSLSKLHAVRFHLLRYGSSNSPRKH------NFSVT 377
           M+L+P+ Q       +++FLDSFQ  LSK H +      Y SSN P K       N++VT
Sbjct: 1   MTLLPTRQFHPATTTKSTFLDSFQTRLSKFHGLPLPFCSYDSSNFPLKTSTLYAANYTVT 60

Query: 376 QNTIRSDFTPGK---YPQRXXXXXXXXXXNDGCRNWIDKWSEDYQPKLPKRPQAVLDYRN 206
            N++   +   K   +P +               NW+D W++ ++   PK P+ V +YR 
Sbjct: 61  SNSLFHQYPKSKTKAFPTKDPTFRS---------NWLDSWNKTHKGFGPKPPKTVFNYRK 111

Query: 205 SDDEMXXXXXXXXXXXXXXXXXXTMEKIVEKLKRFGYIDEANEKMESMPNSNSSSVLERG 26
             D                    TMEKIVEKLK+FGYI E NE+ E         V+ERG
Sbjct: 112 KGD--VWSLSYSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEK-GEEEPKRVIERG 168

Query: 25  SVEDIFYV 2
           S+EDIFYV
Sbjct: 169 SIEDIFYV 176


>ref|XP_007034975.1| CRM family member 3A isoform 2 [Theobroma cacao]
           gi|508714004|gb|EOY05901.1| CRM family member 3A isoform
           2 [Theobroma cacao]
          Length = 685

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 66/188 (35%), Positives = 91/188 (48%), Gaps = 14/188 (7%)
 Frame = -3

Query: 523 MSLVPSCQI-----CQTSFLDSFQNSLSKLHAVRFHLLRYGSSNSPRKH------NFSVT 377
           M+L+P+ Q       +++FLDSFQ  LSK H +      Y SSN P K       N++VT
Sbjct: 1   MTLLPTRQFHPATTTKSTFLDSFQTRLSKFHGLPLPFCSYDSSNFPLKTSTLYAANYTVT 60

Query: 376 QNTIRSDFTPGK---YPQRXXXXXXXXXXNDGCRNWIDKWSEDYQPKLPKRPQAVLDYRN 206
            N++   +   K   +P +               NW+D W++ ++   PK P+ V +YR 
Sbjct: 61  SNSLFHQYPKSKTKAFPTKDPTFRS---------NWLDSWNKTHKGFGPKPPKTVFNYRK 111

Query: 205 SDDEMXXXXXXXXXXXXXXXXXXTMEKIVEKLKRFGYIDEANEKMESMPNSNSSSVLERG 26
             D                    TMEKIVEKLK+FGYI E NE+ E         V+ERG
Sbjct: 112 KGD--VWSLSYSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEK-GEEEPKRVIERG 168

Query: 25  SVEDIFYV 2
           S+EDIFYV
Sbjct: 169 SIEDIFYV 176


>ref|XP_007034974.1| CRM family member 3A isoform 1 [Theobroma cacao]
           gi|508714003|gb|EOY05900.1| CRM family member 3A isoform
           1 [Theobroma cacao]
          Length = 876

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 66/188 (35%), Positives = 91/188 (48%), Gaps = 14/188 (7%)
 Frame = -3

Query: 523 MSLVPSCQI-----CQTSFLDSFQNSLSKLHAVRFHLLRYGSSNSPRKH------NFSVT 377
           M+L+P+ Q       +++FLDSFQ  LSK H +      Y SSN P K       N++VT
Sbjct: 1   MTLLPTRQFHPATTTKSTFLDSFQTRLSKFHGLPLPFCSYDSSNFPLKTSTLYAANYTVT 60

Query: 376 QNTIRSDFTPGK---YPQRXXXXXXXXXXNDGCRNWIDKWSEDYQPKLPKRPQAVLDYRN 206
            N++   +   K   +P +               NW+D W++ ++   PK P+ V +YR 
Sbjct: 61  SNSLFHQYPKSKTKAFPTKDPTFRS---------NWLDSWNKTHKGFGPKPPKTVFNYRK 111

Query: 205 SDDEMXXXXXXXXXXXXXXXXXXTMEKIVEKLKRFGYIDEANEKMESMPNSNSSSVLERG 26
             D                    TMEKIVEKLK+FGYI E NE+ E         V+ERG
Sbjct: 112 KGD--VWSLSYSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKEK-GEEEPKRVIERG 168

Query: 25  SVEDIFYV 2
           S+EDIFYV
Sbjct: 169 SIEDIFYV 176


>gb|EXB29861.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
           notabilis]
          Length = 878

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 70/186 (37%), Positives = 90/186 (48%), Gaps = 12/186 (6%)
 Frame = -3

Query: 523 MSLVPSCQICQTSFLDSFQNSLSKLHAVRFHLLRYGSSNSPRKHN-----FSVTQNTIRS 359
           M+LVPS Q   TSF DS       LH       RYGSS + RKH      +S   ++  S
Sbjct: 1   MALVPSRQFYPTSFFDS-------LHGTHIKFFRYGSSITFRKHRLYSTKYSSVNSSSSS 53

Query: 358 DFTPG-KYPQ--RXXXXXXXXXXND---GCRNWIDKWSEDYQPKLPKRPQAVLDYRNSDD 197
           +  PG KY +  R           D      +WI+KW+E +Q   PK P AVLDYRNS+ 
Sbjct: 54  EQNPGGKYNKFFRTTQNNNWHNKYDDNLSSTSWIEKWNETHQQIRPKPPGAVLDYRNSES 113

Query: 196 -EMXXXXXXXXXXXXXXXXXXTMEKIVEKLKRFGYIDEANEKMESMPNSNSSSVLERGSV 20
                                TME+IVEKLK+FGY+D+   + +         V+E+GSV
Sbjct: 114 GNQPRSSYANRNGGDNNSGGSTMERIVEKLKKFGYMDDVGSEGK---EDKGERVIEKGSV 170

Query: 19  EDIFYV 2
           EDIFYV
Sbjct: 171 EDIFYV 176


>ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Populus trichocarpa]
           gi|222864769|gb|EEF01900.1| hypothetical protein
           POPTR_0010s08770g [Populus trichocarpa]
          Length = 894

 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 62/175 (35%), Positives = 81/175 (46%), Gaps = 1/175 (0%)
 Frame = -3

Query: 523 MSLVPSCQICQTSFLDSFQNSLSKLHAVRFHLLRYGSSNSPRKHNFSVTQNTIRSDFTPG 344
           M+LVPS Q+    ++DSFQ+S SK H       RY SS   R H+      T   D  P 
Sbjct: 1   MALVPSRQL----YIDSFQSSFSKFHGTPLQFFRYSSSFPLRSHSGYACSIT---DKNPS 53

Query: 343 KYPQRXXXXXXXXXXNDGCRNWIDKWSEDYQPKLPKRPQAVLDYRNSDDEMXXXXXXXXX 164
                               +W   W++  +  LP+ PQAV DYR+++            
Sbjct: 54  TKSTSFPTDKSKTLNLSTGSSWFFNWNKPNKQNLPRTPQAVFDYRSNNSN---------- 103

Query: 163 XXXXXXXXXTMEKIVEKLKRFGYID-EANEKMESMPNSNSSSVLERGSVEDIFYV 2
                    TMEKIVEKLK+ GY+D + NE  E M       V+E+GSVEDIFYV
Sbjct: 104 ---SSGSGSTMEKIVEKLKKHGYMDGDVNENKERM----QERVIEKGSVEDIFYV 151


>ref|XP_006420115.1| hypothetical protein CICLE_v10004262mg [Citrus clementina]
           gi|557521988|gb|ESR33355.1| hypothetical protein
           CICLE_v10004262mg [Citrus clementina]
          Length = 934

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 60/190 (31%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
 Frame = -3

Query: 523 MSLVPSCQICQ-TSFLDSFQNSLSKLHAVRFHLLRYGSSNSPRKHNF--SVTQNTIRSDF 353
           M+LVPS Q C  T+  DSFQ+S SK H   FH  R G S   + H F  + + N+     
Sbjct: 1   MALVPSRQFCPATAIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNHFFYQNFSSNSAHEKN 60

Query: 352 TPGKYPQRXXXXXXXXXXNDGCRN------WIDKWSEDYQPKLPKRPQAVLDYRNSDDEM 191
           TP K               D   N      W+ KW++  +    K PQA ++YR ++ ++
Sbjct: 61  TPRKICSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVDL 120

Query: 190 -----XXXXXXXXXXXXXXXXXXTMEKIVEKLKRFGYI--DEANEKMESMPNSNSSSVLE 32
                                  TM KIVEKLK+FGY+   + +   +         V+E
Sbjct: 121 SALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDNDERRGQGKERVIE 180

Query: 31  RGSVEDIFYV 2
           +GS+EDIFYV
Sbjct: 181 KGSIEDIFYV 190


>ref|XP_006420114.1| hypothetical protein CICLE_v10004262mg [Citrus clementina]
           gi|557521987|gb|ESR33354.1| hypothetical protein
           CICLE_v10004262mg [Citrus clementina]
          Length = 860

 Score = 80.5 bits (197), Expect = 4e-13
 Identities = 60/190 (31%), Positives = 85/190 (44%), Gaps = 16/190 (8%)
 Frame = -3

Query: 523 MSLVPSCQICQ-TSFLDSFQNSLSKLHAVRFHLLRYGSSNSPRKHNF--SVTQNTIRSDF 353
           M+LVPS Q C  T+  DSFQ+S SK H   FH  R G S   + H F  + + N+     
Sbjct: 1   MALVPSRQFCPATAIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNHFFYQNFSSNSAHEKN 60

Query: 352 TPGKYPQRXXXXXXXXXXNDGCRN------WIDKWSEDYQPKLPKRPQAVLDYRNSDDEM 191
           TP K               D   N      W+ KW++  +    K PQA ++YR ++ ++
Sbjct: 61  TPRKICSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVDL 120

Query: 190 -----XXXXXXXXXXXXXXXXXXTMEKIVEKLKRFGYI--DEANEKMESMPNSNSSSVLE 32
                                  TM KIVEKLK+FGY+   + +   +         V+E
Sbjct: 121 SALGFARTDSDGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDNDERRGQGKERVIE 180

Query: 31  RGSVEDIFYV 2
           +GS+EDIFYV
Sbjct: 181 KGSIEDIFYV 190


>ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Cucumis sativus]
           gi|449504099|ref|XP_004162252.1| PREDICTED:
           chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Cucumis sativus]
          Length = 874

 Score = 79.3 bits (194), Expect = 8e-13
 Identities = 60/187 (32%), Positives = 84/187 (44%), Gaps = 13/187 (6%)
 Frame = -3

Query: 523 MSLVPSCQICQTSFLDSFQNSLSKLHAVRFHLLRYGSSNSPRKHNF-----SVTQNTIRS 359
           M+L+ S     T+F D+FQ      H     LL+YGSS   R  +F      +T +T  +
Sbjct: 1   MALLHSRLCHATNFFDTFQTEFHSSHI----LLKYGSSVVFRNRSFCSSFYGLTTDTFSN 56

Query: 358 DFTPGKYPQRXXXXXXXXXXNDGCRNWIDKWSEDYQPKLPKRPQAVLDYRNSDDE----- 194
             + G    R          N    +WID+W+E  +   PK P+AVLDY +SD+      
Sbjct: 57  GISYGSLSSRTPVYRYNLRRNLSRVSWIDRWNETAKRNRPKPPRAVLDYPSSDENEVSIS 116

Query: 193 ---MXXXXXXXXXXXXXXXXXXTMEKIVEKLKRFGYIDEANEKMESMPNSNSSSVLERGS 23
                                 TMEKIV KLK+FGYID+ N++            +E+GS
Sbjct: 117 STGFSKSYRASSRIDDDGRGGSTMEKIVRKLKKFGYIDDENKE------KGEERAIEKGS 170

Query: 22  VEDIFYV 2
           VEDI Y+
Sbjct: 171 VEDILYI 177


>ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Citrus sinensis]
          Length = 933

 Score = 76.3 bits (186), Expect = 7e-12
 Identities = 60/191 (31%), Positives = 85/191 (44%), Gaps = 17/191 (8%)
 Frame = -3

Query: 523 MSLVPSCQICQ-TSFLDSFQNSLSKLHAVRFHLLRYGSSNSPRKHNF---SVTQNTIRSD 356
           M+LVPS Q C  T+  DSFQ+S SK H   FH  R G S  P K+ F   + + N+    
Sbjct: 1   MALVPSRQFCPATAIFDSFQSSFSKFHGTHFHFFRCGHS-IPLKNRFFYQNFSSNSAHEK 59

Query: 355 FTPGKYPQRXXXXXXXXXXNDGCRN------WIDKWSEDYQPKLPKRPQAVLDYRNSDDE 194
             P K               D   N      W+ KW++  +    K PQA ++YR ++ +
Sbjct: 60  NPPRKTCSFSTNNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVD 119

Query: 193 M-----XXXXXXXXXXXXXXXXXXTMEKIVEKLKRFGYI--DEANEKMESMPNSNSSSVL 35
           +                       TM KIVEKLK+FGY+   + +   +         V+
Sbjct: 120 LSALGFARTDSDGNGVGGVDDGGNTMGKIVEKLKKFGYVGDGDGDGDNDERRGQGKERVI 179

Query: 34  ERGSVEDIFYV 2
           E+GS+EDIFYV
Sbjct: 180 EKGSIEDIFYV 190


>ref|XP_004495335.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Cicer arietinum]
          Length = 838

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 56/175 (32%), Positives = 81/175 (46%), Gaps = 1/175 (0%)
 Frame = -3

Query: 523 MSLVPSCQICQTSFLDSFQNSLSKLHAVRFHLLRYGSSNSPRKHNFSVTQNTIRSDFTPG 344
           MSLVP+ Q+    F+DSF  S    +++RF                  T  T  ++FT  
Sbjct: 1   MSLVPTRQL--HPFIDSFHTSSPSFNSLRFFTYNL------------TTYKTPSTNFTFK 46

Query: 343 KYPQRXXXXXXXXXXNDGCRNWIDKWSE-DYQPKLPKRPQAVLDYRNSDDEMXXXXXXXX 167
           KYP                  W+  W++   +   PK P+AVL+YRNS +          
Sbjct: 47  KYP-------ILPRNTFSTHTWLKHWNQPSSKHNRPKPPRAVLNYRNSGNGHSSKSHFSS 99

Query: 166 XXXXXXXXXXTMEKIVEKLKRFGYIDEANEKMESMPNSNSSSVLERGSVEDIFYV 2
                     TM++IVEKLK+FGY D+ ++  E   ++    V+E+GSVEDIFYV
Sbjct: 100 SDDEDNNGGSTMDRIVEKLKKFGYDDDDDD--EKKDHNTKERVIEKGSVEDIFYV 152


>ref|XP_006838849.1| hypothetical protein AMTR_s00002p00265220 [Amborella trichopoda]
           gi|548841355|gb|ERN01418.1| hypothetical protein
           AMTR_s00002p00265220 [Amborella trichopoda]
          Length = 882

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 55/179 (30%), Positives = 78/179 (43%), Gaps = 6/179 (3%)
 Frame = -3

Query: 523 MSLVPSCQICQTSFLDSFQNSLSKLHAVRFHLLRYGSSNSPRKHNFSVTQNTIRSDFTPG 344
           M+  PS  +  T+ LDS  ++ S+ +  R  + R   ++     N       + S     
Sbjct: 1   MAFTPSRPLYPTALLDSLHSTWSRFNGSRLQITRLQRTHVSSYLNTITNSKDLESPEKIS 60

Query: 343 KYPQRXXXXXXXXXXNDGCRNWIDKWSEDYQPKLPKRPQAVLDYR----NSDDEMXXXXX 176
             P              G  +WI KW+      LPKRP+AVLDYR    +SD++      
Sbjct: 61  PNPHCNGVIAEKTTQVQG--HWIHKWTGSQCRNLPKRPKAVLDYRDNGVSSDEQEDINSK 118

Query: 175 XXXXXXXXXXXXXTMEKIVEKLKRFGYIDEANE--KMESMPNSNSSSVLERGSVEDIFY 5
                        TM++IV+KLKRFG++DE      ME  P        ERGSVED+FY
Sbjct: 119 DDELGFEEEAEKSTMDQIVDKLKRFGFMDERKTGLDMERRP--------ERGSVEDVFY 169


>gb|EPS65975.1| hypothetical protein M569_08800, partial [Genlisea aurea]
          Length = 761

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 56/182 (30%), Positives = 82/182 (45%), Gaps = 8/182 (4%)
 Frame = -3

Query: 523 MSLVPSCQICQ--TSFLDSFQNSLSKLHAVRFHLLRYGSSNSPRKHNFSVTQNTIRSDFT 350
           M++VP  Q      SF+ S Q+S+S     R  L+ + SS  P         +  R  F 
Sbjct: 1   MAVVPGYQFYPKTASFVHSLQSSVSDFQLRRLQLISFCSSARP---------SASRGRFN 51

Query: 349 PGKYPQRXXXXXXXXXXN--DG---CRNWIDKWSE-DYQPKLPKRPQAVLDYRNSDDEMX 188
           P +  +R             DG     +W+D W+       + ++PQAV+DYRN+DD   
Sbjct: 52  PSRGRKRDGGRNLASGTLVADGRGASSSWMDFWNAVPGTQHVNRKPQAVVDYRNADD--- 108

Query: 187 XXXXXXXXXXXXXXXXXTMEKIVEKLKRFGYIDEANEKMESMPNSNSSSVLERGSVEDIF 8
                            TM++IV KLK+FGY+D+     E   N     ++E+GSVEDIF
Sbjct: 109 --VSDAEEGTSTSTGVSTMQRIVAKLKKFGYLDDDAAADE---NEAGRQIVEKGSVEDIF 163

Query: 7   YV 2
            V
Sbjct: 164 SV 165


>ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Solanum lycopersicum]
          Length = 883

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 36/94 (38%), Positives = 50/94 (53%)
 Frame = -3

Query: 283 NWIDKWSEDYQPKLPKRPQAVLDYRNSDDEMXXXXXXXXXXXXXXXXXXTMEKIVEKLKR 104
           +W+ KW+E       K+ Q VL+YRNS+ +                    M++IVEKLK+
Sbjct: 110 SWLGKWNETRNDIKLKKAQIVLNYRNSNGDTSGSDCEESISGST------MDRIVEKLKK 163

Query: 103 FGYIDEANEKMESMPNSNSSSVLERGSVEDIFYV 2
           FGY DEA EK           V+E+GS+EDIF+V
Sbjct: 164 FGYADEATEK-----EKREKRVVEKGSIEDIFFV 192


>ref|NP_188947.2| CRM family member 3A [Arabidopsis thaliana]
           gi|332643191|gb|AEE76712.1| CRM family member 3A
           [Arabidopsis thaliana]
          Length = 881

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 53/179 (29%), Positives = 72/179 (40%), Gaps = 5/179 (2%)
 Frame = -3

Query: 523 MSLVPSCQICQTSFLDSFQNSLSKLHAVRFHLLRYGSS---NSPRKHNFSVTQNTIRSDF 353
           M++ PS   C T+    F  S       RF  LRY SS    S +   FS   + I S  
Sbjct: 1   MAMKPSLHFCPTTVTKKFVYSFQSSFCFRF--LRYSSSISLGSCKGVTFSSRNDQIAS-- 56

Query: 352 TPGKYPQRXXXXXXXXXXNDGCRN--WIDKWSEDYQPKLPKRPQAVLDYRNSDDEMXXXX 179
                             +  C N  W++ W+   +   PK P+ V++YR          
Sbjct: 57  -------------RRFSFSRDCNNGVWLENWNRIQKRNQPKPPKVVVNYRKEGRFSGSEI 103

Query: 178 XXXXXXXXXXXXXXTMEKIVEKLKRFGYIDEANEKMESMPNSNSSSVLERGSVEDIFYV 2
                         TMEKIVEKLK++GY++E   K            +E+GSVEDIFYV
Sbjct: 104 VSGDDNRSRDGDGSTMEKIVEKLKKYGYMEEVQNK-----EIEQERRIEKGSVEDIFYV 157


>dbj|BAE98956.1| hypothetical protein [Arabidopsis thaliana]
          Length = 717

 Score = 63.2 bits (152), Expect = 6e-08
 Identities = 53/179 (29%), Positives = 72/179 (40%), Gaps = 5/179 (2%)
 Frame = -3

Query: 523 MSLVPSCQICQTSFLDSFQNSLSKLHAVRFHLLRYGSS---NSPRKHNFSVTQNTIRSDF 353
           M++ PS   C T+    F  S       RF  LRY SS    S +   FS   + I S  
Sbjct: 1   MAMKPSLHFCPTTVTKKFVYSFQSSFCFRF--LRYSSSISLGSCKGVTFSSRNDQIAS-- 56

Query: 352 TPGKYPQRXXXXXXXXXXNDGCRN--WIDKWSEDYQPKLPKRPQAVLDYRNSDDEMXXXX 179
                             +  C N  W++ W+   +   PK P+ V++YR          
Sbjct: 57  -------------RRFSFSRDCNNGVWLENWNRIQKRNQPKPPKVVVNYRKEGRFSGSEI 103

Query: 178 XXXXXXXXXXXXXXTMEKIVEKLKRFGYIDEANEKMESMPNSNSSSVLERGSVEDIFYV 2
                         TMEKIVEKLK++GY++E   K            +E+GSVEDIFYV
Sbjct: 104 VSGDDNRSRDGDGSTMEKIVEKLKKYGYMEEVQNK-----EIEQERRIEKGSVEDIFYV 157