BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00015077
         (635 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prun...   102   1e-19
emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]    86   7e-15
ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp...    84   3e-14
ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron sp...    82   1e-13
ref|XP_007034977.1| CRM family member 3A isoform 4 [Theobroma ca...    78   2e-12
ref|XP_007034976.1| CRM family member 3A isoform 3 [Theobroma ca...    78   2e-12
ref|XP_007034975.1| CRM family member 3A isoform 2 [Theobroma ca...    78   2e-12
ref|XP_007034974.1| CRM family member 3A isoform 1 [Theobroma ca...    78   2e-12
gb|EXB29861.1| Chloroplastic group IIA intron splicing facilitat...    74   4e-11
ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Popu...    72   1e-10
ref|XP_004495335.1| PREDICTED: chloroplastic group IIA intron sp...    59   2e-06
ref|XP_006838849.1| hypothetical protein AMTR_s00002p00265220 [A...    57   6e-06

>ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prunus persica]
           gi|462423956|gb|EMJ28219.1| hypothetical protein
           PRUPE_ppa001134mg [Prunus persica]
          Length = 899

 Score =  102 bits (254), Expect = 1e-19
 Identities = 69/184 (37%), Positives = 89/184 (48%), Gaps = 14/184 (7%)
 Frame = -2

Query: 511 MSLVPSRQICQTSFLDSFQSSLSRVHAIRFHFSRHGSSNSPQKHNFYVTQNTNRSNFTPE 332
           M+LVPSRQ+  TS  DSFQSS S+ H    H  R GSS   +KH FY T  T  S   PE
Sbjct: 1   MTLVPSRQLYPTSLFDSFQSSFSKFHGPHIHLFRCGSSIPFKKHTFYATHYTISSTLNPE 60

Query: 331 KYPQRXXXXXXXXXXND--------GCQNGIDKGSEDYQPKLPKRPQAVLDYRN------ 194
           + P R                       + IDK +E ++   PK P+AVLDY++      
Sbjct: 61  QNPLRKSNFVRKNQPISQYKPKKNFSSSSWIDKWNESHKHNRPKPPRAVLDYQSSESGNL 120

Query: 193 XXXXXXXXXXXXXXXXXXXXXEKIVEKLKRFGYIDEANEKREXXXXXXXXXVLERGSVED 14
                                EKIVEKLK+FGY+D++NE +          V+E+GSVED
Sbjct: 121 SGSGYAEGDGGGGRNSSGSTMEKIVEKLKKFGYVDDSNENK----GEVRDSVIEKGSVED 176

Query: 13  IFYV 2
           IFY+
Sbjct: 177 IFYI 180


>emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
          Length = 902

 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 66/181 (36%), Positives = 88/181 (48%), Gaps = 11/181 (6%)
 Frame = -2

Query: 511 MSLVPSRQI--CQTSFLDSFQSSLSRVHAIRFHFSRHGSSNSPQKHNFYVTQNTNRSNFT 338
           M+L+PSRQ     TSFLDSF       H+ R  F R+GSSN  + H+ YVT+NT  SN T
Sbjct: 1   MALLPSRQFYPTTTSFLDSF-------HSTRLQFFRYGSSNRFRTHSSYVTRNTIASNST 53

Query: 337 PEKYPQRXXXXXXXXXXNDGCQNG---------IDKGSEDYQPKLPKRPQAVLDYRNXXX 185
               PQR               +G         IDK +  +Q   PK  + V++YRN   
Sbjct: 54  ---NPQRKSNIVFTNTPVSQYDSGGVSSSGGNWIDKWNGPHQKSHPKEXRPVMNYRN--- 107

Query: 184 XXXXXXXXXXXXXXXXXXEKIVEKLKRFGYIDEANEKREXXXXXXXXXVLERGSVEDIFY 5
                             EKIVEKLK+FGY+D+  E +E         ++E+GS+EDIFY
Sbjct: 108 -SETVSRSDGGSGGGSTMEKIVEKLKKFGYMDDVKETKE----NVQERIIEKGSIEDIFY 162

Query: 4   V 2
           +
Sbjct: 163 I 163


>ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic [Vitis vinifera]
           gi|297737163|emb|CBI26364.3| unnamed protein product
           [Vitis vinifera]
          Length = 902

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 65/181 (35%), Positives = 87/181 (48%), Gaps = 11/181 (6%)
 Frame = -2

Query: 511 MSLVPSRQI--CQTSFLDSFQSSLSRVHAIRFHFSRHGSSNSPQKHNFYVTQNTNRSNFT 338
           M+L+PSRQ     TSFLDSF       H+ R  F R+GSSN  + H+ YV +NT  SN T
Sbjct: 1   MALLPSRQFYPTTTSFLDSF-------HSTRLQFFRYGSSNRFRTHSSYVARNTIASNST 53

Query: 337 PEKYPQRXXXXXXXXXXNDGCQNG---------IDKGSEDYQPKLPKRPQAVLDYRNXXX 185
               PQR               +G         IDK +  +Q   PK  + V++YRN   
Sbjct: 54  ---NPQRKSNIVFTNTPVSQYDSGGVSSSGGNWIDKWNGPHQKSHPKESRPVMNYRN--- 107

Query: 184 XXXXXXXXXXXXXXXXXXEKIVEKLKRFGYIDEANEKREXXXXXXXXXVLERGSVEDIFY 5
                             EKIVEKLK+FGY+D+  E +E         ++E+GS+EDIFY
Sbjct: 108 -SETVSRSDGGSGGGSTMEKIVEKLKKFGYMDDVKETKE----NVQERIIEKGSIEDIFY 162

Query: 4   V 2
           +
Sbjct: 163 I 163


>ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 852

 Score = 82.4 bits (202), Expect = 1e-13
 Identities = 66/175 (37%), Positives = 91/175 (52%), Gaps = 5/175 (2%)
 Frame = -2

Query: 511 MSLVPSRQICQTSFLDSFQSSLSRVHAIRFHFSRHGSSNSPQKHNFYVTQNTNRSNFTPE 332
           M+LVPSRQ+  TS L   +SSLS+ H   FH  R+ SS   +K +F+ TQ    S+ TPE
Sbjct: 1   MTLVPSRQLYPTSLL---ESSLSKFHGTHFHLFRY-SSIPFKKQSFHATQYFITSSLTPE 56

Query: 331 KYPQR----XXXXXXXXXXNDGCQNGIDKGSEDYQPKLPKRPQAVLDYRNXXXXXXXXXX 164
           + P R                 C + ID+ ++  +   P+RP+AVLDY++          
Sbjct: 57  QNPPRKLNLLICQYKPTKNLSSC-SWIDRWNDSRKQHGPRRPRAVLDYQS----NESGNL 111

Query: 163 XXXXXXXXXXXEKIVEKLKRFGYI-DEANEKREXXXXXXXXXVLERGSVEDIFYV 2
                      +KIVEKLK+FGYI ++ NE R          V+E+GSVEDIFYV
Sbjct: 112 SSDGNDGGSTMDKIVEKLKKFGYIAEDKNEGR----GEVRERVIEKGSVEDIFYV 162


>ref|XP_007034977.1| CRM family member 3A isoform 4 [Theobroma cacao]
           gi|508714006|gb|EOY05903.1| CRM family member 3A isoform
           4 [Theobroma cacao]
          Length = 645

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 60/178 (33%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
 Frame = -2

Query: 511 MSLVPSRQI-----CQTSFLDSFQSSLSRVHAIRFHFSRHGSSNSPQKHN-FYVTQNTNR 350
           M+L+P+RQ       +++FLDSFQ+ LS+ H +   F  + SSN P K +  Y    T  
Sbjct: 1   MTLLPTRQFHPATTTKSTFLDSFQTRLSKFHGLPLPFCSYDSSNFPLKTSTLYAANYTVT 60

Query: 349 SNFTPEKYPQRXXXXXXXXXXNDGCQNGIDKGSEDYQPKLPKRPQAVLDYRNXXXXXXXX 170
           SN    +YP+                N +D  ++ ++   PK P+ V +YR         
Sbjct: 61  SNSLFHQYPKSKTKAFPTKDPTFR-SNWLDSWNKTHKGFGPKPPKTVFNYRKKGDVWSLS 119

Query: 169 XXXXXXXXXXXXXE--KIVEKLKRFGYIDEANEKREXXXXXXXXXVLERGSVEDIFYV 2
                           KIVEKLK+FGYI E NE++E         V+ERGS+EDIFYV
Sbjct: 120 YSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKE-KGEEEPKRVIERGSIEDIFYV 176


>ref|XP_007034976.1| CRM family member 3A isoform 3 [Theobroma cacao]
           gi|508714005|gb|EOY05902.1| CRM family member 3A isoform
           3 [Theobroma cacao]
          Length = 856

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 60/178 (33%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
 Frame = -2

Query: 511 MSLVPSRQI-----CQTSFLDSFQSSLSRVHAIRFHFSRHGSSNSPQKHN-FYVTQNTNR 350
           M+L+P+RQ       +++FLDSFQ+ LS+ H +   F  + SSN P K +  Y    T  
Sbjct: 1   MTLLPTRQFHPATTTKSTFLDSFQTRLSKFHGLPLPFCSYDSSNFPLKTSTLYAANYTVT 60

Query: 349 SNFTPEKYPQRXXXXXXXXXXNDGCQNGIDKGSEDYQPKLPKRPQAVLDYRNXXXXXXXX 170
           SN    +YP+                N +D  ++ ++   PK P+ V +YR         
Sbjct: 61  SNSLFHQYPKSKTKAFPTKDPTFR-SNWLDSWNKTHKGFGPKPPKTVFNYRKKGDVWSLS 119

Query: 169 XXXXXXXXXXXXXE--KIVEKLKRFGYIDEANEKREXXXXXXXXXVLERGSVEDIFYV 2
                           KIVEKLK+FGYI E NE++E         V+ERGS+EDIFYV
Sbjct: 120 YSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKE-KGEEEPKRVIERGSIEDIFYV 176


>ref|XP_007034975.1| CRM family member 3A isoform 2 [Theobroma cacao]
           gi|508714004|gb|EOY05901.1| CRM family member 3A isoform
           2 [Theobroma cacao]
          Length = 685

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 60/178 (33%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
 Frame = -2

Query: 511 MSLVPSRQI-----CQTSFLDSFQSSLSRVHAIRFHFSRHGSSNSPQKHN-FYVTQNTNR 350
           M+L+P+RQ       +++FLDSFQ+ LS+ H +   F  + SSN P K +  Y    T  
Sbjct: 1   MTLLPTRQFHPATTTKSTFLDSFQTRLSKFHGLPLPFCSYDSSNFPLKTSTLYAANYTVT 60

Query: 349 SNFTPEKYPQRXXXXXXXXXXNDGCQNGIDKGSEDYQPKLPKRPQAVLDYRNXXXXXXXX 170
           SN    +YP+                N +D  ++ ++   PK P+ V +YR         
Sbjct: 61  SNSLFHQYPKSKTKAFPTKDPTFR-SNWLDSWNKTHKGFGPKPPKTVFNYRKKGDVWSLS 119

Query: 169 XXXXXXXXXXXXXE--KIVEKLKRFGYIDEANEKREXXXXXXXXXVLERGSVEDIFYV 2
                           KIVEKLK+FGYI E NE++E         V+ERGS+EDIFYV
Sbjct: 120 YSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKE-KGEEEPKRVIERGSIEDIFYV 176


>ref|XP_007034974.1| CRM family member 3A isoform 1 [Theobroma cacao]
           gi|508714003|gb|EOY05900.1| CRM family member 3A isoform
           1 [Theobroma cacao]
          Length = 876

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 60/178 (33%), Positives = 85/178 (47%), Gaps = 8/178 (4%)
 Frame = -2

Query: 511 MSLVPSRQI-----CQTSFLDSFQSSLSRVHAIRFHFSRHGSSNSPQKHN-FYVTQNTNR 350
           M+L+P+RQ       +++FLDSFQ+ LS+ H +   F  + SSN P K +  Y    T  
Sbjct: 1   MTLLPTRQFHPATTTKSTFLDSFQTRLSKFHGLPLPFCSYDSSNFPLKTSTLYAANYTVT 60

Query: 349 SNFTPEKYPQRXXXXXXXXXXNDGCQNGIDKGSEDYQPKLPKRPQAVLDYRNXXXXXXXX 170
           SN    +YP+                N +D  ++ ++   PK P+ V +YR         
Sbjct: 61  SNSLFHQYPKSKTKAFPTKDPTFR-SNWLDSWNKTHKGFGPKPPKTVFNYRKKGDVWSLS 119

Query: 169 XXXXXXXXXXXXXE--KIVEKLKRFGYIDEANEKREXXXXXXXXXVLERGSVEDIFYV 2
                           KIVEKLK+FGYI E NE++E         V+ERGS+EDIFYV
Sbjct: 120 YSQSDNNGRSSSSTMEKIVEKLKKFGYIGEENEQKE-KGEEEPKRVIERGSIEDIFYV 176


>gb|EXB29861.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
           notabilis]
          Length = 878

 Score = 73.9 bits (180), Expect = 4e-11
 Identities = 63/186 (33%), Positives = 86/186 (46%), Gaps = 16/186 (8%)
 Frame = -2

Query: 511 MSLVPSRQICQTSFLDSFQSSLSRVHAIRFHFSRHGSSNSPQKHNFYVTQNTN-RSNFTP 335
           M+LVPSRQ   TSF DS       +H     F R+GSS + +KH  Y T+ ++  S+ + 
Sbjct: 1   MALVPSRQFYPTSFFDS-------LHGTHIKFFRYGSSITFRKHRLYSTKYSSVNSSSSS 53

Query: 334 EKYPQRXXXXXXXXXXNDGCQNG----------IDKGSEDYQPKLPKRPQAVLDYR---- 197
           E+ P            N+   N           I+K +E +Q   PK P AVLDYR    
Sbjct: 54  EQNPGGKYNKFFRTTQNNNWHNKYDDNLSSTSWIEKWNETHQQIRPKPPGAVLDYRNSES 113

Query: 196 -NXXXXXXXXXXXXXXXXXXXXXEKIVEKLKRFGYIDEANEKREXXXXXXXXXVLERGSV 20
            N                     E+IVEKLK+FGY+D+   + +         V+E+GSV
Sbjct: 114 GNQPRSSYANRNGGDNNSGGSTMERIVEKLKKFGYMDDVGSEGK---EDKGERVIEKGSV 170

Query: 19  EDIFYV 2
           EDIFYV
Sbjct: 171 EDIFYV 176


>ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Populus trichocarpa]
           gi|222864769|gb|EEF01900.1| hypothetical protein
           POPTR_0010s08770g [Populus trichocarpa]
          Length = 894

 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 59/172 (34%), Positives = 83/172 (48%), Gaps = 2/172 (1%)
 Frame = -2

Query: 511 MSLVPSRQICQTSFLDSFQSSLSRVHAIRFHFSRHGSSNSPQKHNFYVTQNTNRSNFTPE 332
           M+LVPSRQ+    ++DSFQSS S+ H     F R+ SS   + H+ Y    T+++  T  
Sbjct: 1   MALVPSRQL----YIDSFQSSFSKFHGTPLQFFRYSSSFPLRSHSGYACSITDKNPSTKS 56

Query: 331 -KYPQRXXXXXXXXXXNDGCQNGIDKGSEDYQPKLPKRPQAVLDYRNXXXXXXXXXXXXX 155
             +P            +    N     ++  +  LP+ PQAV DYR+             
Sbjct: 57  TSFPTDKSKTLNLSTGSSWFFN----WNKPNKQNLPRTPQAVFDYRS---------NNSN 103

Query: 154 XXXXXXXXEKIVEKLKRFGYID-EANEKREXXXXXXXXXVLERGSVEDIFYV 2
                   EKIVEKLK+ GY+D + NE +E         V+E+GSVEDIFYV
Sbjct: 104 SSGSGSTMEKIVEKLKKHGYMDGDVNENKE----RMQERVIEKGSVEDIFYV 151


>ref|XP_004495335.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
           CRS1, chloroplastic-like [Cicer arietinum]
          Length = 838

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 54/174 (31%), Positives = 77/174 (44%), Gaps = 4/174 (2%)
 Frame = -2

Query: 511 MSLVPSRQICQTSFLDSFQSSLSRVHAIRFHFSRHGSSNSPQKHNFYVTQNTNRSNFTPE 332
           MSLVP+RQ+    F+DSF +S    +++RF             +N   T  T  +NFT +
Sbjct: 1   MSLVPTRQL--HPFIDSFHTSSPSFNSLRFF-----------TYNL-TTYKTPSTNFTFK 46

Query: 331 KYPQRXXXXXXXXXXNDGCQNGIDKGSEDYQPKLPKRPQAVLDYRNXXXXXXXXXXXXXX 152
           KYP                     K +       PK P+AVL+YRN              
Sbjct: 47  KYPILPRNTFSTHTWLKHWNQPSSKHNR------PKPPRAVLNYRNSGNGHSSKSHFSSS 100

Query: 151 XXXXXXXE----KIVEKLKRFGYIDEANEKREXXXXXXXXXVLERGSVEDIFYV 2
                       +IVEKLK+FGY D+ +++++         V+E+GSVEDIFYV
Sbjct: 101 DDEDNNGGSTMDRIVEKLKKFGYDDDDDDEKK--DHNTKERVIEKGSVEDIFYV 152


>ref|XP_006838849.1| hypothetical protein AMTR_s00002p00265220 [Amborella trichopoda]
           gi|548841355|gb|ERN01418.1| hypothetical protein
           AMTR_s00002p00265220 [Amborella trichopoda]
          Length = 882

 Score = 56.6 bits (135), Expect = 6e-06
 Identities = 55/183 (30%), Positives = 75/183 (40%), Gaps = 14/183 (7%)
 Frame = -2

Query: 511 MSLVPSRQICQTSFLDSFQSSLSRVHAIRFHFSR----HGSSNSPQKHNFYVTQNTNRSN 344
           M+  PSR +  T+ LDS  S+ SR +  R   +R    H SS        Y+   TN  +
Sbjct: 1   MAFTPSRPLYPTALLDSLHSTWSRFNGSRLQITRLQRTHVSS--------YLNTITNSKD 52

Query: 343 F-TPEKYPQRXXXXXXXXXXNDGCQ-NGIDKGSEDYQPKLPKRPQAVLDYRN-------- 194
             +PEK                  Q + I K +      LPKRP+AVLDYR+        
Sbjct: 53  LESPEKISPNPHCNGVIAEKTTQVQGHWIHKWTGSQCRNLPKRPKAVLDYRDNGVSSDEQ 112

Query: 193 XXXXXXXXXXXXXXXXXXXXXEKIVEKLKRFGYIDEANEKREXXXXXXXXXVLERGSVED 14
                                ++IV+KLKRFG++DE     +           ERGSVED
Sbjct: 113 EDINSKDDELGFEEEAEKSTMDQIVDKLKRFGFMDERKTGLDMERRP------ERGSVED 166

Query: 13  IFY 5
           +FY
Sbjct: 167 VFY 169