BLASTX nr result
ID: Sinomenium22_contig00014976
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00014976
(1655 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006469266.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 300 1e-78
ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 300 1e-78
emb|CBI26820.3| unnamed protein product [Vitis vinifera] 293 2e-76
ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [V... 293 2e-76
emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera] 293 2e-76
gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis] 285 4e-74
ref|XP_007225261.1| hypothetical protein PRUPE_ppa001524mg [Prun... 277 9e-72
ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [... 276 2e-71
ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Th... 275 4e-71
gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 274 1e-70
ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 269 3e-69
gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum] 266 3e-68
gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus... 265 5e-68
ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis... 261 5e-67
emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum] 261 7e-67
gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa... 261 9e-67
emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera] 259 2e-66
ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-li... 258 7e-66
gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana... 258 7e-66
ref|XP_007153214.1| hypothetical protein PHAVU_003G016600g [Phas... 255 5e-65
>ref|XP_006469266.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 292
Score = 300 bits (769), Expect = 1e-78
Identities = 141/199 (70%), Positives = 167/199 (83%)
Frame = -3
Query: 1653 DKPTYESKQVIGKLFREVKDIPPQISCIKFFTKEVARRSYDYDLKVDGFEDYIDDACYYK 1474
DKPTYES+ VIGKLFR VKDI P SCI+ FTKEVARRSYD D++VDGFED+IDDA Y+K
Sbjct: 95 DKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHK 154
Query: 1473 GEFDFKLGNLMDYYGIKSEAEILGGQIMKLSKSFTIRRDAESIGVAVRSLKKEARAWFDK 1294
G +D+KLGNLMDYYGIK+EAEIL G IMK+SKSFT RRDAE+IG+AVR+L+KEARAWF +
Sbjct: 155 GNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAEAIGMAVRALRKEARAWFKE 214
Query: 1293 KSTNSGSEEDDLYAKASAWYHVTYHPDYWGYYNDGMDKDHFISFPWCVYDKLLHIKKTKA 1114
KS EDD YAKASAWYHVTYHPDYWG YN GM++DHF+SFPWCVYD+L+ IKK K
Sbjct: 215 KS--GSDTEDDAYAKASAWYHVTYHPDYWGCYNHGMNRDHFLSFPWCVYDRLVEIKKDKT 272
Query: 1113 SRRTHFKSLEERFLQSVQL 1057
S F +LE++F Q +++
Sbjct: 273 SIGNAFPALEQQFRQGLRM 291
>ref|XP_006469265.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Citrus sinensis]
Length = 1132
Score = 300 bits (769), Expect = 1e-78
Identities = 141/199 (70%), Positives = 167/199 (83%)
Frame = -3
Query: 1653 DKPTYESKQVIGKLFREVKDIPPQISCIKFFTKEVARRSYDYDLKVDGFEDYIDDACYYK 1474
DKPTYES+ VIGKLFR VKDI P SCI+ FTKEVARRSYD D++VDGFED+IDDA Y+K
Sbjct: 935 DKPTYESQNVIGKLFRAVKDIAPHTSCIRLFTKEVARRSYDPDMEVDGFEDHIDDAIYHK 994
Query: 1473 GEFDFKLGNLMDYYGIKSEAEILGGQIMKLSKSFTIRRDAESIGVAVRSLKKEARAWFDK 1294
G +D+KLGNLMDYYGIK+EAEIL G IMK+SKSFT RRDAE+IG+AVR+L+KEARAWF +
Sbjct: 995 GNYDYKLGNLMDYYGIKTEAEILTGSIMKMSKSFTKRRDAEAIGMAVRALRKEARAWFKE 1054
Query: 1293 KSTNSGSEEDDLYAKASAWYHVTYHPDYWGYYNDGMDKDHFISFPWCVYDKLLHIKKTKA 1114
KS EDD YAKASAWYHVTYHPDYWG YN GM++DHF+SFPWCVYD+L+ IKK K
Sbjct: 1055 KS--GSDTEDDAYAKASAWYHVTYHPDYWGCYNHGMNRDHFLSFPWCVYDRLVEIKKDKT 1112
Query: 1113 SRRTHFKSLEERFLQSVQL 1057
S F +LE++F Q +++
Sbjct: 1113 SIGNAFPALEQQFRQGLRM 1131
>emb|CBI26820.3| unnamed protein product [Vitis vinifera]
Length = 919
Score = 293 bits (749), Expect = 2e-76
Identities = 135/200 (67%), Positives = 166/200 (83%), Gaps = 1/200 (0%)
Frame = -3
Query: 1653 DKPTYESKQVIGKLFREVKDIPPQISCIKFFTKEVARRSYDYDLKVDGFEDYIDDACYYK 1474
DKPTYES+ VIGKLFREVKDI P I+ FT++VAR+SYD D++V GFEDY+ DA YYK
Sbjct: 719 DKPTYESQSVIGKLFREVKDIAPHNCNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYK 778
Query: 1473 GEFDFKLGNLMDYYGIKSEAEILGGQIMKLSKSFTIRRDAESIGVAVRSLKKEARAWFDK 1294
E+D+KLGNLMDYYGIK+E+EIL G IM++SKSF R+DAE+IG+AV+SL+KEAR WF+K
Sbjct: 779 SEYDYKLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNK 838
Query: 1293 KSTNSGSEEDDLYAKASAWYHVTYHPDYWGYYNDGMDKDHFISFPWCVYDKLLHIKKTKA 1114
+ + SE DD+YAKASAWYHVTYHPDYWG YN+GMD+DHF+SFPWCVYDKL+H K+ K
Sbjct: 839 MGSETDSEADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPWCVYDKLIHTKRKKM 898
Query: 1113 SRRT-HFKSLEERFLQSVQL 1057
S R+ H SLE R Q ++L
Sbjct: 899 SGRSLHLSSLERRLSQGLRL 918
>ref|XP_002284914.1| PREDICTED: RNA-dependent RNA polymerase 1 [Vitis vinifera]
Length = 1121
Score = 293 bits (749), Expect = 2e-76
Identities = 135/200 (67%), Positives = 166/200 (83%), Gaps = 1/200 (0%)
Frame = -3
Query: 1653 DKPTYESKQVIGKLFREVKDIPPQISCIKFFTKEVARRSYDYDLKVDGFEDYIDDACYYK 1474
DKPTYES+ VIGKLFREVKDI P I+ FT++VAR+SYD D++V GFEDY+ DA YYK
Sbjct: 921 DKPTYESQSVIGKLFREVKDIAPHNCNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYK 980
Query: 1473 GEFDFKLGNLMDYYGIKSEAEILGGQIMKLSKSFTIRRDAESIGVAVRSLKKEARAWFDK 1294
E+D+KLGNLMDYYGIK+E+EIL G IM++SKSF R+DAE+IG+AV+SL+KEAR WF+K
Sbjct: 981 SEYDYKLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNK 1040
Query: 1293 KSTNSGSEEDDLYAKASAWYHVTYHPDYWGYYNDGMDKDHFISFPWCVYDKLLHIKKTKA 1114
+ + SE DD+YAKASAWYHVTYHPDYWG YN+GMD+DHF+SFPWCVYDKL+H K+ K
Sbjct: 1041 MGSETDSEADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPWCVYDKLIHTKRKKM 1100
Query: 1113 SRRT-HFKSLEERFLQSVQL 1057
S R+ H SLE R Q ++L
Sbjct: 1101 SGRSLHLSSLERRLSQGLRL 1120
>emb|CAN82339.1| hypothetical protein VITISV_039922 [Vitis vinifera]
Length = 654
Score = 293 bits (749), Expect = 2e-76
Identities = 135/200 (67%), Positives = 166/200 (83%), Gaps = 1/200 (0%)
Frame = -3
Query: 1653 DKPTYESKQVIGKLFREVKDIPPQISCIKFFTKEVARRSYDYDLKVDGFEDYIDDACYYK 1474
DKPTYES+ VIGKLFREVKDI P I+ FT++VAR+SYD D++V GFEDY+ DA YYK
Sbjct: 454 DKPTYESQSVIGKLFREVKDIAPHNCNIRSFTRDVARQSYDPDMEVVGFEDYVSDAFYYK 513
Query: 1473 GEFDFKLGNLMDYYGIKSEAEILGGQIMKLSKSFTIRRDAESIGVAVRSLKKEARAWFDK 1294
E+D+KLGNLMDYYGIK+E+EIL G IM++SKSF R+DAE+IG+AV+SL+KEAR WF+K
Sbjct: 514 SEYDYKLGNLMDYYGIKTESEILSGSIMRMSKSFDRRKDAEAIGLAVKSLRKEARTWFNK 573
Query: 1293 KSTNSGSEEDDLYAKASAWYHVTYHPDYWGYYNDGMDKDHFISFPWCVYDKLLHIKKTKA 1114
+ + SE DD+YAKASAWYHVTYHPDYWG YN+GMD+DHF+SFPWCVYDKL+H K+ K
Sbjct: 574 MGSETDSEADDVYAKASAWYHVTYHPDYWGCYNEGMDRDHFLSFPWCVYDKLIHTKRKKM 633
Query: 1113 SRRT-HFKSLEERFLQSVQL 1057
S R+ H SLE R Q ++L
Sbjct: 634 SGRSLHLSSLERRLSQGLRL 653
>gb|EXB53859.1| RNA-dependent RNA polymerase 1 [Morus notabilis]
Length = 1133
Score = 285 bits (729), Expect = 4e-74
Identities = 133/201 (66%), Positives = 164/201 (81%), Gaps = 2/201 (0%)
Frame = -3
Query: 1653 DKPTYESKQVIGKLFREVKDIPPQISCIKFFTKEVARRSYDYDLKVDGFEDYIDDACYYK 1474
+KPTYES+ VIGKLFREVKDI P + + FFTKEVA RSYD D++ DGFEDYIDDA YYK
Sbjct: 932 NKPTYESQNVIGKLFREVKDIAPNVGSLHFFTKEVASRSYDPDMEYDGFEDYIDDAFYYK 991
Query: 1473 GEFDFKLGNLMDYYGIKSEAEILGGQIMKLSKSFTIRRDAESIGVAVRSLKKEARAWFDK 1294
+D+KLGNL+DYYGIKSEAEI+GG IM++SKSFT RRDAESI +AVR+L+KEAR WF++
Sbjct: 992 SNYDYKLGNLLDYYGIKSEAEIIGGSIMRMSKSFTKRRDAESINMAVRALRKEARTWFNE 1051
Query: 1293 KSTNSGSEEDDLYAKASAWYHVTYHPDYWGYYNDGMDKDHFISFPWCVYDKLLHIKKTKA 1114
K ++ S DD+YAKASAWY+VTYH YWG YN+GM++DH++SFPWCVYDKL+ IK++KA
Sbjct: 1052 KGSSLDSAADDVYAKASAWYYVTYHHSYWGCYNEGMNRDHYLSFPWCVYDKLVQIKRSKA 1111
Query: 1113 S--RRTHFKSLEERFLQSVQL 1057
S R SLE F + + L
Sbjct: 1112 SVRRSLQMSSLERAFDRRLHL 1132
>ref|XP_007225261.1| hypothetical protein PRUPE_ppa001524mg [Prunus persica]
gi|462422197|gb|EMJ26460.1| hypothetical protein
PRUPE_ppa001524mg [Prunus persica]
Length = 808
Score = 277 bits (709), Expect = 9e-72
Identities = 131/201 (65%), Positives = 161/201 (80%), Gaps = 2/201 (0%)
Frame = -3
Query: 1653 DKPTYESKQVIGKLFREVKDIPPQISCIKFFTKEVARRSYDYDLKVDGFEDYIDDACYYK 1474
DKPTY+S VIG+LFREVKD+ P I+ F++EVAR+SYD D++VDGFEDYI+DA YYK
Sbjct: 607 DKPTYQSCNVIGELFREVKDVEPHDGSIRSFSREVARQSYDRDMEVDGFEDYIEDAFYYK 666
Query: 1473 GEFDFKLGNLMDYYGIKSEAEILGGQIMKLSKSFTIRRDAESIGVAVRSLKKEARAWFDK 1294
+D LGNL+DYYGIK+EAEIL G +MK+SKSFT RRD + I +AVRSL+KEAR WF++
Sbjct: 667 SNYDSILGNLLDYYGIKTEAEILSGSVMKMSKSFTKRRDIDPINMAVRSLRKEARTWFNE 726
Query: 1293 KSTNSGSEEDDLYAKASAWYHVTYHPDYWGYYNDGMDKDHFISFPWCVYDKLLHIKKTKA 1114
K+T S DD+YAKASAWYHVTYHP Y+G YN+G+++DHFISFPWCVYDKL+HIKK KA
Sbjct: 727 KATGLDSGADDVYAKASAWYHVTYHPKYFGCYNEGLNRDHFISFPWCVYDKLVHIKKEKA 786
Query: 1113 S--RRTHFKSLEERFLQSVQL 1057
S R + SLE RF + L
Sbjct: 787 SVRRARNLSSLERRFRNDLHL 807
>ref|XP_002311536.1| RNA-directed RNA Polymerase family protein [Populus trichocarpa]
gi|222851356|gb|EEE88903.1| RNA-directed RNA Polymerase
family protein [Populus trichocarpa]
Length = 1133
Score = 276 bits (707), Expect = 2e-71
Identities = 128/202 (63%), Positives = 164/202 (81%), Gaps = 3/202 (1%)
Frame = -3
Query: 1653 DKPTYESKQVIGKLFREVKDIPPQISCIKFFTKEVARRSYDYDLKVDGFEDYIDDACYYK 1474
DKP+YES+ VIGKLFREVKDI P+ S I+ FT +VAR+ YD D++VDGFEDYIDDA YYK
Sbjct: 931 DKPSYESRNVIGKLFREVKDIAPRTSSIRSFTSDVARQCYDPDMEVDGFEDYIDDAFYYK 990
Query: 1473 GEFDFKLGNLMDYYGIKSEAEILGGQIMKLSKSFTIRRDAESIGVAVRSLKKEARAWFDK 1294
+D+KLGNLM+YYGIK+EAE+L G MK+SKSFT +RDAE+IG+AVRSLKKEAR+WF++
Sbjct: 991 SNYDYKLGNLMEYYGIKTEAELLSGSFMKMSKSFTKKRDAEAIGMAVRSLKKEARSWFNE 1050
Query: 1293 KSTNSGSEEDDLYAKASAWYHVTYHPDYWGYYNDGMDKDHFISFPWCVYDKLLHIKKTKA 1114
K + S+ DD+ AKASAWYHVTYH +YWG YN+GM++DHF+SFPWCVYDKL+ IK+ +
Sbjct: 1051 KGSGLDSQADDVDAKASAWYHVTYHHNYWGCYNEGMNRDHFLSFPWCVYDKLIQIKRRNS 1110
Query: 1113 SRRTH---FKSLEERFLQSVQL 1057
+R S+E +F + + L
Sbjct: 1111 ARIRRSLILPSVERQFSRGLHL 1132
>ref|XP_007045552.1| RNA-dependent RNA polymerase 1 isoform 1 [Theobroma cacao]
gi|590697846|ref|XP_007045553.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|590697850|ref|XP_007045554.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
gi|508709487|gb|EOY01384.1| RNA-dependent RNA polymerase
1 isoform 1 [Theobroma cacao] gi|508709488|gb|EOY01385.1|
RNA-dependent RNA polymerase 1 isoform 1 [Theobroma
cacao] gi|508709489|gb|EOY01386.1| RNA-dependent RNA
polymerase 1 isoform 1 [Theobroma cacao]
Length = 1109
Score = 275 bits (703), Expect = 4e-71
Identities = 129/200 (64%), Positives = 160/200 (80%), Gaps = 1/200 (0%)
Frame = -3
Query: 1653 DKPTYESKQVIGKLFREVKDIPPQISCIKFFTKEVARRSYDYDLKVDGFEDYIDDACYYK 1474
DKPTY+S VIGKLFREVKD+ P I+ T+E R YD D++VDG+EDY+DDA Y+K
Sbjct: 909 DKPTYQSYNVIGKLFREVKDLAPNECFIRSLTRERLERFYDPDMEVDGYEDYVDDAFYHK 968
Query: 1473 GEFDFKLGNLMDYYGIKSEAEILGGQIMKLSKSFTIRRDAESIGVAVRSLKKEARAWFDK 1294
+D+KLGNLM+YYGIK+EAEIL G IMK+S+SFT +RDAE+IGVAVRSL+KEAR+WF++
Sbjct: 969 SNYDYKLGNLMEYYGIKTEAEILSGGIMKMSRSFTKQRDAEAIGVAVRSLRKEARSWFNE 1028
Query: 1293 KSTNSGSEEDDLYAKASAWYHVTYHPDYWGYYNDGMDKDHFISFPWCVYDKLLHIKKTKA 1114
K SE DDLYAKASAWYHVTYHP YWG YN+GM+++HF+SFPWCVYDKL+ IKK
Sbjct: 1029 KGNGLDSEADDLYAKASAWYHVTYHPSYWGLYNEGMNRNHFLSFPWCVYDKLILIKKKVT 1088
Query: 1113 SRR-THFKSLEERFLQSVQL 1057
SRR + SLE F + ++L
Sbjct: 1089 SRRNSRLSSLESLFARGLRL 1108
>gb|ABQ45352.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 274 bits (700), Expect = 1e-70
Identities = 127/201 (63%), Positives = 162/201 (80%), Gaps = 2/201 (0%)
Frame = -3
Query: 1653 DKPTYESKQVIGKLFREVKDIPPQISCIKFFTKEVARRSYDYDLKVDGFEDYIDDACYYK 1474
DKP+Y+S VIGKLFREVK++ P IKF T+E +R YD D++V+GFEDYIDDA ++K
Sbjct: 909 DKPSYQSHNVIGKLFREVKNLAPNECSIKFLTREKMQRFYDPDMEVEGFEDYIDDAFFHK 968
Query: 1473 GEFDFKLGNLMDYYGIKSEAEILGGQIMKLSKSFTIRRDAESIGVAVRSLKKEARAWFDK 1294
++D+KLGNLMDYYG+K+EAEILGG IMK+S+SFT +RDAE+I +AVRSL+KEAR+WF++
Sbjct: 969 SKYDYKLGNLMDYYGVKTEAEILGGGIMKMSRSFTKKRDAEAISMAVRSLRKEARSWFNE 1028
Query: 1293 KSTNSGSEEDDLYAKASAWYHVTYHPDYWGYYNDGMDKDHFISFPWCVYDKLLHIKKTKA 1114
K + E DD YAKASAWY+VTYHP YWG YN+GM++DHF+SFPWCVYDKL+ IKK KA
Sbjct: 1029 KGSELDEEIDDAYAKASAWYYVTYHPSYWGQYNEGMNRDHFLSFPWCVYDKLIQIKKEKA 1088
Query: 1113 SRR--THFKSLEERFLQSVQL 1057
+ R SLE RF + + L
Sbjct: 1089 AVREALDLSSLEHRFQRGLHL 1109
>ref|XP_004297425.1| PREDICTED: RNA-dependent RNA polymerase 1-like [Fragaria vesca subsp.
vesca]
Length = 1119
Score = 269 bits (687), Expect = 3e-69
Identities = 126/192 (65%), Positives = 156/192 (81%)
Frame = -3
Query: 1653 DKPTYESKQVIGKLFREVKDIPPQISCIKFFTKEVARRSYDYDLKVDGFEDYIDDACYYK 1474
DK TY S VIG+LFREVKDI P S I FT++VA + YD D++VDGFEDY++DA Y+K
Sbjct: 920 DKRTYISHNVIGQLFREVKDIAPHDSSIASFTRQVATKCYDPDMEVDGFEDYLEDAFYHK 979
Query: 1473 GEFDFKLGNLMDYYGIKSEAEILGGQIMKLSKSFTIRRDAESIGVAVRSLKKEARAWFDK 1294
G +D+KLGN++DYYGIK+EAEIL G IM LSKSFT RRDA++I VAV+SL+KEARAWF++
Sbjct: 980 GNYDYKLGNMLDYYGIKTEAEILSGSIMTLSKSFTKRRDADAINVAVKSLRKEARAWFNE 1039
Query: 1293 KSTNSGSEEDDLYAKASAWYHVTYHPDYWGYYNDGMDKDHFISFPWCVYDKLLHIKKTKA 1114
K T S +DD+YAKASAWYHVTYHP+Y+G YN+GM++ HFISFPWCV+DKL HIKK K
Sbjct: 1040 KDTGIDSGDDDVYAKASAWYHVTYHPNYFGLYNEGMNRAHFISFPWCVFDKLGHIKKEKV 1099
Query: 1113 SRRTHFKSLEER 1078
++ SLE R
Sbjct: 1100 NQARLISSLENR 1111
>gb|ABE01124.1| RNA-dependent RNA polymerase [Gossypium hirsutum]
Length = 1110
Score = 266 bits (679), Expect = 3e-68
Identities = 125/201 (62%), Positives = 157/201 (78%), Gaps = 2/201 (0%)
Frame = -3
Query: 1653 DKPTYESKQVIGKLFREVKDIPPQISCIKFFTKEVARRSYDYDLKVDGFEDYIDDACYYK 1474
DKP+Y+S VIGKLFREVK++ P IK T+E +R YD D++V+GF DYIDDA +YK
Sbjct: 909 DKPSYQSYNVIGKLFREVKNLAPNECSIKLLTREKMKRFYDPDMEVEGFVDYIDDAFFYK 968
Query: 1473 GEFDFKLGNLMDYYGIKSEAEILGGQIMKLSKSFTIRRDAESIGVAVRSLKKEARAWFDK 1294
++D+KLGNLMDYYG+K+EAEIL G IMK+S+SFT +RDAESI +AVRSL+KEAR+WF++
Sbjct: 969 SKYDYKLGNLMDYYGVKTEAEILSGGIMKMSRSFTKKRDAESISMAVRSLRKEARSWFNE 1028
Query: 1293 KSTNSGSEEDDLYAKASAWYHVTYHPDYWGYYNDGMDKDHFISFPWCVYDKLLHIKKTKA 1114
K + E DD YAKASAWY+VTYH YWG YN+GM++DHF+SFPWCVYDKL+ IKK KA
Sbjct: 1029 KGSELDEEIDDAYAKASAWYYVTYHHSYWGQYNEGMNRDHFLSFPWCVYDKLIQIKKEKA 1088
Query: 1113 SRR--THFKSLEERFLQSVQL 1057
+ R SLE RF + L
Sbjct: 1089 ALREALDLSSLEHRFQRGFHL 1109
>gb|EYU28878.1| hypothetical protein MIMGU_mgv1a000505mg [Mimulus guttatus]
Length = 1110
Score = 265 bits (677), Expect = 5e-68
Identities = 125/199 (62%), Positives = 158/199 (79%)
Frame = -3
Query: 1653 DKPTYESKQVIGKLFREVKDIPPQISCIKFFTKEVARRSYDYDLKVDGFEDYIDDACYYK 1474
DK Y S +VIGKLFREVKDI PQ S + FTKEVARRSYD D++VDGFED+ID+A +K
Sbjct: 917 DKINYASSRVIGKLFREVKDIAPQTSSFRSFTKEVARRSYDPDMEVDGFEDHIDEAFLHK 976
Query: 1473 GEFDFKLGNLMDYYGIKSEAEILGGQIMKLSKSFTIRRDAESIGVAVRSLKKEARAWFDK 1294
E+D+KLGNLM+YYG+K+EAE+L G IMK+SK+F R+DAE+IG AVRSL+ EAR+WF K
Sbjct: 977 TEYDYKLGNLMEYYGVKTEAEVLSGGIMKMSKTFDRRKDAEAIGAAVRSLRNEARSWFKK 1036
Query: 1293 KSTNSGSEEDDLYAKASAWYHVTYHPDYWGYYNDGMDKDHFISFPWCVYDKLLHIKKTKA 1114
G+E DD+YAKASAWY+VTYHPDY+G YN+GM +DH++SFPWCVYDKL+ IKK +
Sbjct: 1037 -----GTEADDVYAKASAWYYVTYHPDYFGCYNEGMKRDHYLSFPWCVYDKLVKIKKDNS 1091
Query: 1113 SRRTHFKSLEERFLQSVQL 1057
R + SL +F V++
Sbjct: 1092 RRASQMASLRRQFNDRVRI 1110
>ref|NP_001267692.1| RNA-dependent RNA polymerase 1-like [Cucumis sativus]
gi|316989899|gb|ADU77015.1| RNA-dependent RNA polymerase
1a [Cucumis sativus]
Length = 1130
Score = 261 bits (668), Expect = 5e-67
Identities = 118/183 (64%), Positives = 151/183 (82%)
Frame = -3
Query: 1653 DKPTYESKQVIGKLFREVKDIPPQISCIKFFTKEVARRSYDYDLKVDGFEDYIDDACYYK 1474
D+P+YES +VIGKLFR VKDI P +S I+ FT++VARR YD D++V+GFEDY++DA Y+K
Sbjct: 928 DRPSYESNKVIGKLFRAVKDIAPTLSHIRSFTRDVARRCYDCDMEVEGFEDYVEDAFYHK 987
Query: 1473 GEFDFKLGNLMDYYGIKSEAEILGGQIMKLSKSFTIRRDAESIGVAVRSLKKEARAWFDK 1294
+D+KLGNL+DYYGIKSEAE+L G IM++SKSFT RRDAE+I +AVRSL+KEAR WF+
Sbjct: 988 SNYDYKLGNLLDYYGIKSEAEVLSGSIMRMSKSFTRRRDAEAINLAVRSLRKEARTWFNA 1047
Query: 1293 KSTNSGSEEDDLYAKASAWYHVTYHPDYWGYYNDGMDKDHFISFPWCVYDKLLHIKKTKA 1114
+ + S DDL+AKASAWY+VTYH YWG YN+GM +DH++SFPWCVYDKL+ IK+
Sbjct: 1048 RE-GADSNSDDLFAKASAWYYVTYHHSYWGCYNEGMKRDHYLSFPWCVYDKLMQIKENNL 1106
Query: 1113 SRR 1105
RR
Sbjct: 1107 RRR 1109
>emb|CAA09697.1| RNA-directed RNA polymerase [Nicotiana tabacum]
Length = 1116
Score = 261 bits (667), Expect = 7e-67
Identities = 127/191 (66%), Positives = 153/191 (80%), Gaps = 2/191 (1%)
Frame = -3
Query: 1653 DKPTYESKQVIGKLFREVKDIPPQISCIKFFTKEVARRSYDYDLKVDGFEDYIDDACYYK 1474
DKPTY S++VIGKLF++VK+ PQ S I FT++VAR+SYD D+ VDGFEDYID+A YYK
Sbjct: 920 DKPTYPSEKVIGKLFQKVKNKTPQASSIATFTRDVARKSYDSDMIVDGFEDYIDEAFYYK 979
Query: 1473 GEFDFKLGNLMDYYGIKSEAEILGGQIMKLSKSFTIRRDAESIGVAVRSLKKEARAWFDK 1294
E+D KLGNLMDYYGIK+EAEIL G IMK SK+F R+DAE+IGVAVR L+KEARAWF +
Sbjct: 980 SEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFDRRKDAEAIGVAVRCLRKEARAWFKR 1039
Query: 1293 KSTNSGSEEDDLYAKASAWYHVTYHPDYWGYYNDGMDKDHFISFPWCVYDKLLHIKKTKA 1114
+ S+ DD+ AKASAWYHVTYH YWG YN+G+ +DHFISFPWCVYD+L+ IKK KA
Sbjct: 1040 R-----SDIDDMLAKASAWYHVTYHHTYWGLYNEGLKRDHFISFPWCVYDQLIQIKKAKA 1094
Query: 1113 SRR--THFKSL 1087
+R H SL
Sbjct: 1095 RKRPVPHLSSL 1105
>gb|ABV24845.1| RNA-dependent RNA polymerase [Nicotiana glutinosa]
gi|209420668|gb|ACI46982.1| RNA-dependent RNA polymerase
[Nicotiana glutinosa]
Length = 1117
Score = 261 bits (666), Expect = 9e-67
Identities = 126/202 (62%), Positives = 158/202 (78%), Gaps = 2/202 (0%)
Frame = -3
Query: 1653 DKPTYESKQVIGKLFREVKDIPPQISCIKFFTKEVARRSYDYDLKVDGFEDYIDDACYYK 1474
DKPTY S++VIGKLF++VKD PQ S I FT +VAR+SYD D+ V+GFEDYID+A YYK
Sbjct: 921 DKPTYHSEKVIGKLFQKVKDKTPQASSIANFTMDVARKSYDGDMIVNGFEDYIDEAFYYK 980
Query: 1473 GEFDFKLGNLMDYYGIKSEAEILGGQIMKLSKSFTIRRDAESIGVAVRSLKKEARAWFDK 1294
E+D KLGNLMDYYGIK+EAEIL G IMK SK+F R+DA++IGVAVRSL+KEAR WF +
Sbjct: 981 SEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFDRRKDADAIGVAVRSLRKEARTWFKR 1040
Query: 1293 KSTNSGSEEDDLYAKASAWYHVTYHPDYWGYYNDGMDKDHFISFPWCVYDKLLHIKKTKA 1114
+ S+ DD+ AKASAWYHVTYH YWG+YN+G+ +DHFISFPWC+YD+L+ IKK KA
Sbjct: 1041 R-----SDIDDMLAKASAWYHVTYHHTYWGFYNEGLKRDHFISFPWCIYDQLIQIKKAKA 1095
Query: 1113 SRR--THFKSLEERFLQSVQLI 1054
++ H SL + + + LI
Sbjct: 1096 RKKPVLHLSSLGNQLSRKLVLI 1117
>emb|CAN82568.1| hypothetical protein VITISV_040047 [Vitis vinifera]
Length = 697
Score = 259 bits (662), Expect = 2e-66
Identities = 125/220 (56%), Positives = 165/220 (75%)
Frame = -3
Query: 1653 DKPTYESKQVIGKLFREVKDIPPQISCIKFFTKEVARRSYDYDLKVDGFEDYIDDACYYK 1474
+KPTYES+ VIGKLFREVKD+ P I+ FT++VA +SYD D++VDGFEDY+ DA YYK
Sbjct: 463 NKPTYESQSVIGKLFREVKDVAPHNYDIRSFTRDVAMQSYDADMEVDGFEDYVRDAFYYK 522
Query: 1473 GEFDFKLGNLMDYYGIKSEAEILGGQIMKLSKSFTIRRDAESIGVAVRSLKKEARAWFDK 1294
++DFKLG+LMD YGI++E+EIL G +MK+SKSF R+DAE+I +AVRSL+KEAR WF+K
Sbjct: 523 SQYDFKLGSLMDCYGIRTESEILSGSLMKMSKSFDKRKDAEAIALAVRSLRKEARTWFNK 582
Query: 1293 KSTNSGSEEDDLYAKASAWYHVTYHPDYWGYYNDGMDKDHFISFPWCVYDKLLHIKKTKA 1114
+ + + DD+YA ASAWYHVTYHP YWG YN+GM DHF+SFPWCVYDKL+ IK+ K
Sbjct: 583 MGSGTYAGADDVYAIASAWYHVTYHPYYWGCYNEGMYHDHFLSFPWCVYDKLIQIKRDKM 642
Query: 1113 SRRTHFKSLEERFLQSVQLI*GKSASISSGLSTYYSFLYV 994
S +HF+ E+ L SV S+ + ++ +Y+
Sbjct: 643 S-ISHFQKPEDN-LSSVSTTTSFSSDYAQPNLVTFTIIYI 680
>ref|XP_003518619.1| PREDICTED: RNA-dependent RNA polymerase 1-like isoform X1 [Glycine
max] gi|571439308|ref|XP_006574822.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X2 [Glycine
max] gi|571439310|ref|XP_006574823.1| PREDICTED:
RNA-dependent RNA polymerase 1-like isoform X3 [Glycine
max]
Length = 1125
Score = 258 bits (658), Expect = 7e-66
Identities = 126/194 (64%), Positives = 151/194 (77%), Gaps = 1/194 (0%)
Frame = -3
Query: 1653 DKPTYESKQVIGKLFREVKDIPPQISCIKFFTKEVARRSYDYDLKVDGFEDYIDDACYYK 1474
DKPTY+S VIGKLFREVK+I I FTK VAR SYD++++VDGF DY+DDA Y+K
Sbjct: 928 DKPTYKSHNVIGKLFREVKEISTSAGSITSFTKLVARDSYDHEMEVDGFMDYVDDAFYHK 987
Query: 1473 GEFDFKLGNLMDYYGIKSEAEILGGQIMKLSKSFTIRRDAESIGVAVRSLKKEARAWFDK 1294
+D+KLGNLMDYYGIK+EAEILGG IMK+SKSF RRDAE+I +AVRSL+KEARAWF++
Sbjct: 988 TNYDYKLGNLMDYYGIKTEAEILGGNIMKMSKSFNKRRDAEAINMAVRSLRKEARAWFNE 1047
Query: 1293 KSTNS-GSEEDDLYAKASAWYHVTYHPDYWGYYNDGMDKDHFISFPWCVYDKLLHIKKTK 1117
S+ S D+YAKASAWYHVTYHP YWG YN+GM++DH++SF WCVY L+ IKK K
Sbjct: 1048 NSSGDVDSGSSDVYAKASAWYHVTYHPSYWGCYNEGMNRDHYLSFSWCVYPLLVQIKKEK 1107
Query: 1116 ASRRTHFKSLEERF 1075
S R SLE F
Sbjct: 1108 LSIRR--SSLEYSF 1119
>gb|ABL68088.1| putative RNA-directed RNA polymerase 1 [Nicotiana attenuata]
Length = 1044
Score = 258 bits (658), Expect = 7e-66
Identities = 127/202 (62%), Positives = 155/202 (76%), Gaps = 2/202 (0%)
Frame = -3
Query: 1653 DKPTYESKQVIGKLFREVKDIPPQISCIKFFTKEVARRSYDYDLKVDGFEDYIDDACYYK 1474
DKPTY S++VIGKLFR+VKD PQ + I FT +VAR+SY D+ V+GFEDY D+A YYK
Sbjct: 848 DKPTYHSEKVIGKLFRKVKDKTPQATSIATFTMDVARKSYAGDMIVNGFEDYTDEAFYYK 907
Query: 1473 GEFDFKLGNLMDYYGIKSEAEILGGQIMKLSKSFTIRRDAESIGVAVRSLKKEARAWFDK 1294
E+D KLGNLMDYYGIK+EAEIL G +MK SK+F R+DAE+IGVAVRSL+KEAR WF K
Sbjct: 908 SEYDNKLGNLMDYYGIKTEAEILSGGVMKASKTFDRRKDAEAIGVAVRSLRKEARTWFKK 967
Query: 1293 KSTNSGSEEDDLYAKASAWYHVTYHPDYWGYYNDGMDKDHFISFPWCVYDKLLHIKKTKA 1114
+ S+ DD+ AKASAWYHVTYH YWG YN+G+ +DHFISFPWCVYD+L+ IKK KA
Sbjct: 968 R-----SDIDDMLAKASAWYHVTYHHTYWGLYNEGLRRDHFISFPWCVYDQLIQIKKAKA 1022
Query: 1113 SRR--THFKSLEERFLQSVQLI 1054
+R H SL + + + LI
Sbjct: 1023 RKRPVLHLSSLGTQLSRKLVLI 1044
>ref|XP_007153214.1| hypothetical protein PHAVU_003G016600g [Phaseolus vulgaris]
gi|593705717|ref|XP_007153215.1| hypothetical protein
PHAVU_003G016600g [Phaseolus vulgaris]
gi|561026568|gb|ESW25208.1| hypothetical protein
PHAVU_003G016600g [Phaseolus vulgaris]
gi|561026569|gb|ESW25209.1| hypothetical protein
PHAVU_003G016600g [Phaseolus vulgaris]
Length = 1122
Score = 255 bits (651), Expect = 5e-65
Identities = 124/186 (66%), Positives = 147/186 (79%), Gaps = 1/186 (0%)
Frame = -3
Query: 1653 DKPTYESKQVIGKLFREVKDIPPQISCIKFFTKEVARRSYDYDLKVDGFEDYIDDACYYK 1474
DK TY+S VIGKLFREVK+I S I FT+EVARRSYD +++VDGF DY+DDA YYK
Sbjct: 931 DKVTYKSPNVIGKLFREVKEISADDS-ISSFTQEVARRSYDTEMEVDGFMDYVDDAIYYK 989
Query: 1473 GEFDFKLGNLMDYYGIKSEAEILGGQIMKLSKSFTIRRDAESIGVAVRSLKKEARAWFDK 1294
+D+KLGNLMDYYGIK+E EIL G I K+SKSF RRDAE++ VAVRSL+KEAR+WF
Sbjct: 990 TNYDYKLGNLMDYYGIKTEGEILSGNITKMSKSFNKRRDAEAVNVAVRSLRKEARSWF-- 1047
Query: 1293 KSTNSGSEEDDLYAKASAWYHVTYHPDYWGYYND-GMDKDHFISFPWCVYDKLLHIKKTK 1117
N GS +DD YAKASAWYHVTYHP +WG YND GM++DH++SFPWCVY +LL IKK K
Sbjct: 1048 ---NEGSSDDDAYAKASAWYHVTYHPSFWGSYNDEGMNRDHYLSFPWCVYPQLLQIKKEK 1104
Query: 1116 ASRRTH 1099
S R +
Sbjct: 1105 MSMRNY 1110