BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00014929
         (451 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004292461.1| PREDICTED: pentatricopeptide repeat-containi...   133   3e-29
ref|XP_004504743.1| PREDICTED: pentatricopeptide repeat-containi...   132   5e-29
ref|XP_003637117.1| Pentatricopeptide repeat-containing protein,...   132   6e-29
gb|EXB24043.1| hypothetical protein L484_006075 [Morus notabilis]     131   8e-29
emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]   130   2e-28
ref|XP_006357212.1| PREDICTED: pentatricopeptide repeat-containi...   129   5e-28
ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containi...   129   5e-28
ref|XP_007159032.1| hypothetical protein PHAVU_002G202800g [Phas...   128   7e-28
ref|XP_004239364.1| PREDICTED: pentatricopeptide repeat-containi...   127   2e-27
ref|XP_002521241.1| pentatricopeptide repeat-containing protein,...   127   2e-27
ref|XP_007041730.1| Mitochondrial editing factor 9 isoform 1 [Th...   126   4e-27
ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containi...   126   4e-27
ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containi...   125   6e-27
ref|XP_007199439.1| hypothetical protein PRUPE_ppa026671mg [Prun...   121   1e-25
gb|EYU17792.1| hypothetical protein MIMGU_mgv1a021010mg [Mimulus...   118   7e-25
gb|EPS71093.1| hypothetical protein M569_03667, partial [Genlise...   118   1e-24
ref|XP_006475400.1| PREDICTED: pentatricopeptide repeat-containi...   116   3e-24
ref|XP_006451414.1| hypothetical protein CICLE_v10007675mg [Citr...   116   3e-24
ref|XP_004168978.1| PREDICTED: pentatricopeptide repeat-containi...   114   2e-23
ref|XP_004144924.1| PREDICTED: pentatricopeptide repeat-containi...   114   2e-23

>ref|XP_004292461.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 942

 Score =  133 bits (334), Expect = 3e-29
 Identities = 61/85 (71%), Positives = 74/85 (87%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           D    NK ISHLIRTGR+++AR VFD+M  RN VTWNS+ISGY + REIAKARKLF+EMP
Sbjct: 326 DLFSLNKNISHLIRTGRISQAREVFDNMKHRNIVTWNSMISGYVKRREIAKARKLFDEMP 385

Query: 77  QRDVVSWNLMLSGYMSCRGSRHIEE 3
           +RDVVSWN+M+SGY+SCRG+R+IEE
Sbjct: 386 ERDVVSWNVMISGYVSCRGARYIEE 410



 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 36/78 (46%), Positives = 54/78 (69%), Gaps = 3/78 (3%)
 Frame = -3

Query: 257 DFRQWNKKISHLI--RTGR-LNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFE 87
           D   WN  IS  +  R  R + E R +FD M +R++V+WN++ISGYA+N  + +A +LFE
Sbjct: 388 DVVSWNVMISGYVSCRGARYIEEGRSLFDQMPTRDSVSWNTMISGYAKNGRMGEALRLFE 447

Query: 86  EMPQRDVVSWNLMLSGYM 33
            MP+R VVSWN M++G++
Sbjct: 448 CMPERTVVSWNAMVTGFL 465



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 30/70 (42%), Positives = 44/70 (62%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDV 66
           WN  I   ++ G +  AR +FD M+  +T +WN++ISGY    ++ +A KLF EMP  D 
Sbjct: 569 WNSMIMCYVKAGDVVSARELFDQMIEHDTFSWNTMISGYVNISDMEEASKLFREMPTPDT 628

Query: 65  VSWNLMLSGY 36
           +SWN M+ GY
Sbjct: 629 LSWNSMILGY 638



 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 30/74 (40%), Positives = 46/74 (62%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           D   WN  IS  +    + EA ++F  M + +T++WNS+I GYAQ   +  A + F+ MP
Sbjct: 596 DTFSWNTMISGYVNISDMEEASKLFREMPTPDTLSWNSMILGYAQVSRLKLAHEFFDRMP 655

Query: 77  QRDVVSWNLMLSGY 36
           Q+ +VSWN M++GY
Sbjct: 656 QKSLVSWNSMIAGY 669



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 30/73 (41%), Positives = 45/73 (61%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           D   WN  IS   + GR+ EA R+F+ M  R  V+WN++++G+ QN ++  A + FE MP
Sbjct: 422 DSVSWNTMISGYAKNGRMGEALRLFECMPERTVVSWNAMVTGFLQNGDVGSAVEFFERMP 481

Query: 77  QRDVVSWNLMLSG 39
           QRD  S   ++SG
Sbjct: 482 QRDGASLCALVSG 494



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSM-------------LSRNTVTWNSLISGYAQNREIAK 105
           +N  I+   + GR+ EA + FD +               RN V+WNS+I  Y +  ++  
Sbjct: 525 YNTLIAGYGQRGRVEEAWQFFDQIPICQEKVGGEGRRFERNVVSWNSMIMCYVKAGDVVS 584

Query: 104 ARKLFEEMPQRDVVSWNLMLSGYMS 30
           AR+LF++M + D  SWN M+SGY++
Sbjct: 585 ARELFDQMIEHDTFSWNTMISGYVN 609


>ref|XP_004504743.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like isoform X1 [Cicer arietinum]
           gi|502142002|ref|XP_004504744.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like isoform X2 [Cicer arietinum]
           gi|502142004|ref|XP_004504745.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like isoform X3 [Cicer arietinum]
           gi|502142006|ref|XP_004504746.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like isoform X4 [Cicer arietinum]
          Length = 644

 Score =  132 bits (332), Expect = 5e-29
 Identities = 60/82 (73%), Positives = 72/82 (87%)
 Frame = -3

Query: 248 QWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRD 69
           Q NKKISHLIRTGRL EAR  FDS+ +RNTVTWNS+I+GY Q REI+KAR+LF+EMP +D
Sbjct: 40  QCNKKISHLIRTGRLTEARSFFDSITNRNTVTWNSMITGYVQRREISKARQLFDEMPDKD 99

Query: 68  VVSWNLMLSGYMSCRGSRHIEE 3
           +VSWNL++SGY SCRGSR +EE
Sbjct: 100 IVSWNLIISGYFSCRGSRFVEE 121



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 29/74 (39%), Positives = 51/74 (68%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           D   WN  IS  ++   + EA ++F  M S + ++WNS+ISG+AQ  ++ +A++ FE MP
Sbjct: 304 DVCSWNTMISGYVQICNMEEASKLFSEMTSPDELSWNSIISGFAQIGDLKRAKEFFERMP 363

Query: 77  QRDVVSWNLMLSGY 36
           +R+++SWN +++GY
Sbjct: 364 RRNLISWNSLIAGY 377



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 28/70 (40%), Positives = 44/70 (62%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDV 66
           WN  +   ++ G +  AR +FD M+ R+  +WN++ISGY Q   + +A KLF EM   D 
Sbjct: 277 WNSMMMCYVKAGDVVSARELFDRMMERDVCSWNTMISGYVQICNMEEASKLFSEMTSPDE 336

Query: 65  VSWNLMLSGY 36
           +SWN ++SG+
Sbjct: 337 LSWNSIISGF 346



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 33/78 (42%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
 Frame = -3

Query: 257 DFRQWNKKISHLI--RTGR-LNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFE 87
           D   WN  IS     R  R + E R++FD M  R+ V+WN++ISGYA+N  + +A ++F 
Sbjct: 99  DIVSWNLIISGYFSCRGSRFVEEGRKLFDQMPQRDCVSWNTVISGYAKNGRMDQALEIFN 158

Query: 86  EMPQRDVVSWNLMLSGYM 33
            MPQR+VVS N +++G++
Sbjct: 159 SMPQRNVVSSNALINGFL 176



 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 10/81 (12%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLS----------RNTVTWNSLISGYAQNREIAKARK 96
           +N  I+   + G + EAR +FD ++S          RN V+WNS++  Y +  ++  AR+
Sbjct: 236 YNTLIAGYGQKGMVEEARCLFDGVMSDGNEGRGRFRRNVVSWNSMMMCYVKAGDVVSARE 295

Query: 95  LFEEMPQRDVVSWNLMLSGYM 33
           LF+ M +RDV SWN M+SGY+
Sbjct: 296 LFDRMMERDVCSWNTMISGYV 316



 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 28/73 (38%), Positives = 44/73 (60%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           D   WN  IS   + GR+++A  +F+SM  RN V+ N+LI+G+  N ++  A   F  MP
Sbjct: 133 DCVSWNTVISGYAKNGRMDQALEIFNSMPQRNVVSSNALINGFLLNGDVDSAVGFFRTMP 192

Query: 77  QRDVVSWNLMLSG 39
           +RD  S + ++SG
Sbjct: 193 ERDSASLSGLISG 205


>ref|XP_003637117.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula] gi|355503052|gb|AES84255.1|
           Pentatricopeptide repeat-containing protein, partial
           [Medicago truncatula]
          Length = 592

 Score =  132 bits (331), Expect = 6e-29
 Identities = 65/102 (63%), Positives = 77/102 (75%), Gaps = 2/102 (1%)
 Frame = -3

Query: 302 YFNSVVYQSKQGE--PLDFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGY 129
           +  S   Q+K  +  P    Q NKKISHLIRTGRL  AR +FDS   RNTVTWNS+I+GY
Sbjct: 20  HIRSFTSQTKTNDTIPQSLYQLNKKISHLIRTGRLTAARTLFDSTNHRNTVTWNSMITGY 79

Query: 128 AQNREIAKARKLFEEMPQRDVVSWNLMLSGYMSCRGSRHIEE 3
            Q REIAKAR+LF+EMP RD+VSWNL++SGY SCRGSR +EE
Sbjct: 80  VQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEE 121



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 30/81 (37%), Positives = 50/81 (61%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDV 66
           WN  +   ++ G +  AR +FD M+ R+  +WN++I GY Q  ++ +A KLF EMP  DV
Sbjct: 280 WNSMMMCYVKAGDVVSARELFDRMVERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPDV 339

Query: 65  VSWNLMLSGYMSCRGSRHIEE 3
           +SWN ++SG+      + ++E
Sbjct: 340 LSWNSIISGFSQIGDLKRVKE 360



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 25/74 (33%), Positives = 48/74 (64%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           D   WN  I   ++ G + EA ++F  M   + ++WNS+ISG++Q  ++ + ++ FE MP
Sbjct: 307 DACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFENMP 366

Query: 77  QRDVVSWNLMLSGY 36
            ++++SWN +++GY
Sbjct: 367 HKNLISWNSVIAGY 380



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 33/78 (42%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
 Frame = -3

Query: 257 DFRQWNKKISHLI--RTGR-LNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFE 87
           D   WN  IS     R  R + E R++FD M  R+ V+WN++ISGYA+N  + +A ++FE
Sbjct: 99  DIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQRDCVSWNTVISGYAKNGRMDQAIEIFE 158

Query: 86  EMPQRDVVSWNLMLSGYM 33
            MP+R+VVS N +++G++
Sbjct: 159 SMPERNVVSCNAVVNGFL 176



 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 13/84 (15%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLS-------------RNTVTWNSLISGYAQNREIAK 105
           +N  I+   + G + EAR VFD ++S             RN V+WNS++  Y +  ++  
Sbjct: 236 YNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVS 295

Query: 104 ARKLFEEMPQRDVVSWNLMLSGYM 33
           AR+LF+ M +RD  SWN ++ GY+
Sbjct: 296 ARELFDRMVERDACSWNTVIGGYV 319


>gb|EXB24043.1| hypothetical protein L484_006075 [Morus notabilis]
          Length = 708

 Score =  131 bits (330), Expect = 8e-29
 Identities = 61/86 (70%), Positives = 72/86 (83%)
 Frame = -3

Query: 260 LDFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEM 81
           LD +  NKKISHLIR+GR+ EAR  FD M  RN VTWNS++SGY + RE+AKARKLF+EM
Sbjct: 64  LDLKFLNKKISHLIRSGRIGEAREAFDGMKHRNVVTWNSMMSGYVKRREMAKARKLFDEM 123

Query: 80  PQRDVVSWNLMLSGYMSCRGSRHIEE 3
           P+RD+VSWNLM+SG MSCRGSR IEE
Sbjct: 124 PERDIVSWNLMISGCMSCRGSRDIEE 149



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 35/78 (44%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
 Frame = -3

Query: 257 DFRQWNKKISHLI--RTGR-LNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFE 87
           D   WN  IS  +  R  R + E R++FD M  R+ V+WN++ISGY +N  +++A +LF 
Sbjct: 127 DIVSWNLMISGCMSCRGSRDIEEGRKLFDQMHERDCVSWNTMISGYTKNGRMSQALQLFN 186

Query: 86  EMPQRDVVSWNLMLSGYM 33
            MP+R+VVSWN M+SG++
Sbjct: 187 AMPERNVVSWNAMISGFL 204



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 28/71 (39%), Positives = 48/71 (67%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDV 66
           WN  I   ++   +  AR++FD +  R+T +WN++I+GY Q  ++ +A  LF +MP  DV
Sbjct: 308 WNSMIMCYLKVKDIVSARQLFDQLTERDTFSWNTMITGYVQMSDMDEASNLFRKMPNPDV 367

Query: 65  VSWNLMLSGYM 33
           ++WNLM+SG++
Sbjct: 368 LTWNLMVSGFV 378



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 13/84 (15%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSM-------------LSRNTVTWNSLISGYAQNREIAK 105
           +N  I+   + GR+ EARR+FD +               RN V+WNS+I  Y + ++I  
Sbjct: 264 YNTLIAGYGQRGRIEEARRLFDEIPFYWGERKECSKRFERNVVSWNSMIMCYLKVKDIVS 323

Query: 104 ARKLFEEMPQRDVVSWNLMLSGYM 33
           AR+LF+++ +RD  SWN M++GY+
Sbjct: 324 ARQLFDQLTERDTFSWNTMITGYV 347



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 28/73 (38%), Positives = 48/73 (65%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           D   WN  IS   + GR+++A ++F++M  RN V+WN++ISG+  N +  +A   F++MP
Sbjct: 161 DCVSWNTMISGYTKNGRMSQALQLFNAMPERNVVSWNAMISGFLLNGDAVRAIDFFDKMP 220

Query: 77  QRDVVSWNLMLSG 39
           +RD  S + ++SG
Sbjct: 221 ERDDASRSALVSG 233



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/74 (35%), Positives = 45/74 (60%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           D   WN  I+  ++   ++EA  +F  M + + +TWN ++SG+ Q   +  A   FE MP
Sbjct: 335 DTFSWNTMITGYVQMSDMDEASNLFRKMPNPDVLTWNLMVSGFVQIGSLKVACYYFERMP 394

Query: 77  QRDVVSWNLMLSGY 36
           Q+++VSWN +++GY
Sbjct: 395 QKNLVSWNSIIAGY 408


>emb|CAN67319.1| hypothetical protein VITISV_039344 [Vitis vinifera]
          Length = 761

 Score =  130 bits (327), Expect = 2e-28
 Identities = 64/99 (64%), Positives = 77/99 (77%)
 Frame = -3

Query: 299 FNSVVYQSKQGEPLDFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQN 120
           F S + Q K    LD    NK+ISHLIR GR+NEAR +FD+M  RN VTWNS+I+GY + 
Sbjct: 52  FVSTLQQPKNSVSLDLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRR 111

Query: 119 REIAKARKLFEEMPQRDVVSWNLMLSGYMSCRGSRHIEE 3
           RE+AKARKLF+EMP RDVVSWNLM+SGY+SCRG R +EE
Sbjct: 112 REMAKARKLFDEMPDRDVVSWNLMISGYVSCRG-RWVEE 149



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 37/94 (39%), Positives = 56/94 (59%)
 Frame = -3

Query: 317 WVRSRYFNSVVYQSKQGEPLDFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLI 138
           +V++R   S      Q +  D   WN  IS  +R   + EA  +F  M + +T+TWNS+I
Sbjct: 314 YVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPNPDTLTWNSMI 373

Query: 137 SGYAQNREIAKARKLFEEMPQRDVVSWNLMLSGY 36
           SG+AQ   +  AR LF  +PQ+++VSWN M++GY
Sbjct: 374 SGFAQKGNLELARALFATIPQKNLVSWNSMIAGY 407



 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 36/109 (33%), Positives = 60/109 (55%)
 Frame = -3

Query: 365 WKLSNSRVAACGVDVTWVRSRYFNSVVYQSKQGEPLDFRQWNKKISHLIRTGRLNEARRV 186
           W L  S   +C       R R+     +   +    D   WN  IS   R+GR++EA ++
Sbjct: 132 WNLMISGYVSC-------RGRWVEEGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQL 184

Query: 185 FDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDVVSWNLMLSG 39
           FDSM  RN V+WN++++G+ QN ++ +A + F  MP+RD  S + +++G
Sbjct: 185 FDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMPERDSASLSALVAG 233



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 28/70 (40%), Positives = 46/70 (65%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDV 66
           WN  I   ++   +  AR +FD M  R+T++WN++ISGY +  ++ +A  LF+EMP  D 
Sbjct: 307 WNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPNPDT 366

Query: 65  VSWNLMLSGY 36
           ++WN M+SG+
Sbjct: 367 LTWNSMISGF 376



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRT-GR-LNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEE 84
           D   WN  IS  +   GR + E R +FD M  R+ V+WN++ISGY ++  + +A +LF+ 
Sbjct: 128 DVVSWNLMISGYVSCRGRWVEEGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQLFDS 187

Query: 83  MPQRDVVSWNLMLSGYM 33
           M +R+VVSWN M++G++
Sbjct: 188 MQERNVVSWNAMVTGFL 204



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 12/74 (16%)
 Frame = -3

Query: 218 RTGRLNEARRVFDSM------------LSRNTVTWNSLISGYAQNREIAKARKLFEEMPQ 75
           + GR+++AR++FD +              RN V+WNS+I  Y + R+I  AR LF++M +
Sbjct: 273 QNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKE 332

Query: 74  RDVVSWNLMLSGYM 33
           RD +SWN M+SGY+
Sbjct: 333 RDTISWNTMISGYV 346


>ref|XP_006357212.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Solanum tuberosum]
          Length = 668

 Score =  129 bits (323), Expect = 5e-28
 Identities = 61/101 (60%), Positives = 78/101 (77%)
 Frame = -3

Query: 305 RYFNSVVYQSKQGEPLDFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYA 126
           RY +++  +     P D R+ NK I++LIR GRL +AR +FD ++ RNTVTWNS+ISGY 
Sbjct: 37  RYHSTLRRKISDAAP-DIRRANKNITNLIRNGRLEDARELFDKLIHRNTVTWNSMISGYV 95

Query: 125 QNREIAKARKLFEEMPQRDVVSWNLMLSGYMSCRGSRHIEE 3
           Q REI KAR LF+EMPQRDVVSWNLM+SGY+SCRG  ++EE
Sbjct: 96  QQREIVKARYLFDEMPQRDVVSWNLMISGYLSCRGKGYLEE 136



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 29/73 (39%), Positives = 49/73 (67%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           D+  WN  IS   + GR+ EA  VF+ M  +N V+WN++ISG+ +N ++  A + F+ MP
Sbjct: 148 DYVSWNTMISGYAKCGRMGEALEVFECMPVKNVVSWNAVISGFLRNGDVKTAVEYFKRMP 207

Query: 77  QRDVVSWNLMLSG 39
           +RD  S+++++SG
Sbjct: 208 ERDSASFSVLVSG 220



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 36/98 (36%), Positives = 56/98 (57%), Gaps = 3/98 (3%)
 Frame = -3

Query: 317 WVRSRYFNSVVYQSKQGEPLDFRQWNKKISHLIRT---GRLNEARRVFDSMLSRNTVTWN 147
           +V+ R      Y   +    D   WN  IS  +     G L E R +FD M  R+ V+WN
Sbjct: 94  YVQQREIVKARYLFDEMPQRDVVSWNLMISGYLSCRGKGYLEEGRNLFDEMPERDYVSWN 153

Query: 146 SLISGYAQNREIAKARKLFEEMPQRDVVSWNLMLSGYM 33
           ++ISGYA+   + +A ++FE MP ++VVSWN ++SG++
Sbjct: 154 TMISGYAKCGRMGEALEVFECMPVKNVVSWNAVISGFL 191



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 29/73 (39%), Positives = 43/73 (58%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           D   WN  +   +    ++EA  +F  M + + +TWNS+ISGYAQ  ++  A   FE MP
Sbjct: 322 DIFSWNTMVCGYVHASNMSEASNLFSKMPNPDVLTWNSIISGYAQAGKLELAHDYFERMP 381

Query: 77  QRDVVSWNLMLSG 39
            ++ VSWN M+SG
Sbjct: 382 HKNRVSWNSMISG 394



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 33/96 (34%), Positives = 55/96 (57%), Gaps = 13/96 (13%)
 Frame = -3

Query: 281 QSKQGEPLDFRQWNKKISHLIRTGRLNEARRVFDSMLS-------------RNTVTWNSL 141
           +S  G+      +N  I+   + GR+ +ARR+FD + S             RN V+WNS+
Sbjct: 239 ESSDGKEDMVHAYNTLIAGYGQKGRVGDARRIFDKVPSCSGKGISKKKRFERNVVSWNSM 298

Query: 140 ISGYAQNREIAKARKLFEEMPQRDVVSWNLMLSGYM 33
           I  Y++  ++  AR+LF++M +RD+ SWN M+ GY+
Sbjct: 299 ILAYSKADDMVSARELFDQMTERDIFSWNTMVCGYV 334



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 25/70 (35%), Positives = 41/70 (58%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDV 66
           WN  I    +   +  AR +FD M  R+  +WN+++ GY     +++A  LF +MP  DV
Sbjct: 295 WNSMILAYSKADDMVSARELFDQMTERDIFSWNTMVCGYVHASNMSEASNLFSKMPNPDV 354

Query: 65  VSWNLMLSGY 36
           ++WN ++SGY
Sbjct: 355 LTWNSIISGY 364


>ref|XP_002278375.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial [Vitis vinifera]
          Length = 681

 Score =  129 bits (323), Expect = 5e-28
 Identities = 63/99 (63%), Positives = 77/99 (77%)
 Frame = -3

Query: 299 FNSVVYQSKQGEPLDFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQN 120
           F S + Q K    LD    NK+ISHLIR GR+NEAR +FD+M  RN VTWNS+I+GY + 
Sbjct: 52  FVSTLQQPKNSVSLDLYTPNKRISHLIRNGRINEARALFDAMPQRNIVTWNSMITGYVRR 111

Query: 119 REIAKARKLFEEMPQRDVVSWNLMLSGYMSCRGSRHIEE 3
           RE+AKARKLF+EMP RDVVSWNLM+SGY+SC+G R +EE
Sbjct: 112 REMAKARKLFDEMPDRDVVSWNLMISGYVSCQG-RWVEE 149



 Score = 73.6 bits (179), Expect = 3e-11
 Identities = 37/94 (39%), Positives = 56/94 (59%)
 Frame = -3

Query: 317 WVRSRYFNSVVYQSKQGEPLDFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLI 138
           +V++R   S      Q +  D   WN  IS  +R   + EA  +F  M + +T+TWNS+I
Sbjct: 314 YVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPNPDTLTWNSMI 373

Query: 137 SGYAQNREIAKARKLFEEMPQRDVVSWNLMLSGY 36
           SG+AQ   +  AR LF  +PQ+++VSWN M++GY
Sbjct: 374 SGFAQKGNLELARALFATIPQKNLVSWNSMIAGY 407



 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 30/73 (41%), Positives = 50/73 (68%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           D   WN  IS   R+GR++EA ++FDSM  RN V+WN++++G+ QN ++ +A + F  MP
Sbjct: 161 DCVSWNTMISGYTRSGRMDEALQLFDSMQERNVVSWNAMVTGFLQNGDVERAIEFFMRMP 220

Query: 77  QRDVVSWNLMLSG 39
           +RD  S + +++G
Sbjct: 221 ERDSASLSALVAG 233



 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 28/70 (40%), Positives = 46/70 (65%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDV 66
           WN  I   ++   +  AR +FD M  R+T++WN++ISGY +  ++ +A  LF+EMP  D 
Sbjct: 307 WNSMIMCYVKARDIFSARVLFDQMKERDTISWNTMISGYVRMSDMEEAWMLFQEMPNPDT 366

Query: 65  VSWNLMLSGY 36
           ++WN M+SG+
Sbjct: 367 LTWNSMISGF 376



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRT-GR-LNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEE 84
           D   WN  IS  +   GR + E R +FD M  R+ V+WN++ISGY ++  + +A +LF+ 
Sbjct: 128 DVVSWNLMISGYVSCQGRWVEEGRHLFDEMPERDCVSWNTMISGYTRSGRMDEALQLFDS 187

Query: 83  MPQRDVVSWNLMLSGYM 33
           M +R+VVSWN M++G++
Sbjct: 188 MQERNVVSWNAMVTGFL 204



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 30/74 (40%), Positives = 47/74 (63%), Gaps = 12/74 (16%)
 Frame = -3

Query: 218 RTGRLNEARRVFDSM------------LSRNTVTWNSLISGYAQNREIAKARKLFEEMPQ 75
           + GR+++AR++FD +              RN V+WNS+I  Y + R+I  AR LF++M +
Sbjct: 273 QNGRVDKARQLFDQIPFYDGGQKDGGRFERNVVSWNSMIMCYVKARDIFSARVLFDQMKE 332

Query: 74  RDVVSWNLMLSGYM 33
           RD +SWN M+SGY+
Sbjct: 333 RDTISWNTMISGYV 346


>ref|XP_007159032.1| hypothetical protein PHAVU_002G202800g [Phaseolus vulgaris]
           gi|561032447|gb|ESW31026.1| hypothetical protein
           PHAVU_002G202800g [Phaseolus vulgaris]
          Length = 640

 Score =  128 bits (322), Expect = 7e-28
 Identities = 61/82 (74%), Positives = 71/82 (86%)
 Frame = -3

Query: 248 QWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRD 69
           Q NK IS+LIR+GRL+EAR +FDSM  RN VTWNS+ISGY   REIAKAR+LF+EMPQRD
Sbjct: 31  QSNKNISNLIRSGRLSEARALFDSMKHRNAVTWNSMISGYIHRREIAKARQLFDEMPQRD 90

Query: 68  VVSWNLMLSGYMSCRGSRHIEE 3
           +VSWNL++SGY SCRGSR IEE
Sbjct: 91  IVSWNLIVSGYFSCRGSRFIEE 112



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 30/70 (42%), Positives = 47/70 (67%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDV 66
           WN  +   ++ G +  AR +FD M+ R+T +WN++ISGY Q   + +A KLF EMP  DV
Sbjct: 271 WNSMMMSYVKAGDIVSARELFDRMVERDTCSWNTVISGYVQISNMDEASKLFREMPSPDV 330

Query: 65  VSWNLMLSGY 36
           +SWN +++G+
Sbjct: 331 LSWNSIVTGF 340



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 27/74 (36%), Positives = 50/74 (67%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           D   WN  IS  ++   ++EA ++F  M S + ++WNS+++G+AQN  +  A+  FE+MP
Sbjct: 298 DTCSWNTVISGYVQISNMDEASKLFREMPSPDVLSWNSIVTGFAQNGNLNLAKDFFEKMP 357

Query: 77  QRDVVSWNLMLSGY 36
            ++++SWN +++GY
Sbjct: 358 HKNLISWNTLIAGY 371



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/78 (39%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
 Frame = -3

Query: 257 DFRQWNKKISHLI--RTGR-LNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFE 87
           D   WN  +S     R  R + E R++F+ M  R+ V+WN++ISGYA+N  + +A K F 
Sbjct: 90  DIVSWNLIVSGYFSCRGSRFIEEGRKMFELMPQRDCVSWNTVISGYAKNGRMDQALKFFN 149

Query: 86  EMPQRDVVSWNLMLSGYM 33
            MP+R+VVS N +++G++
Sbjct: 150 AMPERNVVSSNAVITGFL 167



 Score = 60.1 bits (144), Expect = 3e-07
 Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 13/84 (15%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSM-------------LSRNTVTWNSLISGYAQNREIAK 105
           +N  I+   + G + EARR+FD +               RN ++WNS++  Y +  +I  
Sbjct: 227 YNTLIAGYGQRGHVEEARRLFDEIPDDRGGGDKGQRRFRRNVISWNSMMMSYVKAGDIVS 286

Query: 104 ARKLFEEMPQRDVVSWNLMLSGYM 33
           AR+LF+ M +RD  SWN ++SGY+
Sbjct: 287 ARELFDRMVERDTCSWNTVISGYV 310


>ref|XP_004239364.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Solanum lycopersicum]
          Length = 661

 Score =  127 bits (319), Expect = 2e-27
 Identities = 62/111 (55%), Positives = 78/111 (70%)
 Frame = -3

Query: 335 CGVDVTWVRSRYFNSVVYQSKQGEPLDFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTV 156
           C  D+  V+   + S +         D R+ NK I++LIR GRL +AR +FD +  RNTV
Sbjct: 19  CDRDIASVQKLRYQSTLRCKISDAVPDIRRVNKNITNLIRNGRLEDARVLFDELTHRNTV 78

Query: 155 TWNSLISGYAQNREIAKARKLFEEMPQRDVVSWNLMLSGYMSCRGSRHIEE 3
           TWNS+ISGY Q REI KAR LF+EMPQRDVVSWNLM+SGY+SCRG  ++EE
Sbjct: 79  TWNSMISGYVQQREIVKARYLFDEMPQRDVVSWNLMISGYLSCRGRGYLEE 129



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 30/73 (41%), Positives = 44/73 (60%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           D   WN  +   +    ++EA  +F  M + + +TWNS+ISGYAQ  ++  AR  FE MP
Sbjct: 315 DIFSWNTMVCGYVHASNMSEASSLFSKMPNPDVLTWNSIISGYAQAGKLELARNYFERMP 374

Query: 77  QRDVVSWNLMLSG 39
            ++ VSWN M+SG
Sbjct: 375 HKNRVSWNSMISG 387



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 29/73 (39%), Positives = 49/73 (67%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           D+  WN  IS   + GR++EA  VF+ M  +N V+WN++ISG+ +N ++  A + F+ MP
Sbjct: 141 DYVSWNTMISGYAKCGRMDEALEVFECMPVKNVVSWNAVISGFLRNGDVKTAVEYFKRMP 200

Query: 77  QRDVVSWNLMLSG 39
            RD  S+++++SG
Sbjct: 201 VRDSASFSVLVSG 213



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 31/84 (36%), Positives = 52/84 (61%), Gaps = 13/84 (15%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLS-------------RNTVTWNSLISGYAQNREIAK 105
           +N  I+   + GR+ +ARR+FD++ S             RN V+WNS+I  Y++  ++  
Sbjct: 244 YNTLIAGYGQKGRVGDARRIFDNVPSFSGQGNSKKKKFERNVVSWNSMILAYSKAGDLVS 303

Query: 104 ARKLFEEMPQRDVVSWNLMLSGYM 33
           AR+LF++M +RD+ SWN M+ GY+
Sbjct: 304 ARELFDQMTERDIFSWNTMVCGYV 327



 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 27/70 (38%), Positives = 42/70 (60%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDV 66
           WN  I    + G L  AR +FD M  R+  +WN+++ GY     +++A  LF +MP  DV
Sbjct: 288 WNSMILAYSKAGDLVSARELFDQMTERDIFSWNTMVCGYVHASNMSEASSLFSKMPNPDV 347

Query: 65  VSWNLMLSGY 36
           ++WN ++SGY
Sbjct: 348 LTWNSIISGY 357



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
 Frame = -3

Query: 317 WVRSRYFNSVVYQSKQGEPLDFRQWNKKISHLIRT---GRLNEARRVFDSMLSRNTVTWN 147
           +V+ R      Y   +    D   WN  IS  +     G L E R +F  M  R+ V+WN
Sbjct: 87  YVQQREIVKARYLFDEMPQRDVVSWNLMISGYLSCRGRGYLEEGRNLFGEMPERDYVSWN 146

Query: 146 SLISGYAQNREIAKARKLFEEMPQRDVVSWNLMLSGYM 33
           ++ISGYA+   + +A ++FE MP ++VVSWN ++SG++
Sbjct: 147 TMISGYAKCGRMDEALEVFECMPVKNVVSWNAVISGFL 184


>ref|XP_002521241.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539509|gb|EEF41097.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 662

 Score =  127 bits (318), Expect = 2e-27
 Identities = 62/104 (59%), Positives = 75/104 (72%)
 Frame = -3

Query: 314 VRSRYFNSVVYQSKQGEPLDFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLIS 135
           V+SR F          E  +    NKKISH  RTGR+NEAR +FD +  RNTVTWNS+IS
Sbjct: 27  VKSRSFAMPPRAKTSVEDSNLYSSNKKISHFTRTGRINEARALFDKLERRNTVTWNSMIS 86

Query: 134 GYAQNREIAKARKLFEEMPQRDVVSWNLMLSGYMSCRGSRHIEE 3
           GY +  E+ KARKLF+EMP+RDVVSWNL++SGY+SCRG R IEE
Sbjct: 87  GYVKRGEMTKARKLFDEMPERDVVSWNLIISGYVSCRGKRFIEE 130



 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/94 (36%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
 Frame = -3

Query: 299 FNSVVYQSKQGEPLDFR------QWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLI 138
           F+ + + + QG+    R       WN  I   ++ G +  AR++FD M  R++ +WN++I
Sbjct: 265 FDKIPFYNDQGKGRTGRFERNVVSWNTMIMCYVKAGDVISARKLFDQMPDRDSFSWNTMI 324

Query: 137 SGYAQNREIAKARKLFEEMPQRDVVSWNLMLSGY 36
           SGY    ++ +A  LF +MP  D +SWNLM+SGY
Sbjct: 325 SGYVHVLDMEEASNLFHKMPSPDTLSWNLMISGY 358



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 28/69 (40%), Positives = 50/69 (72%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDV 66
           WN  IS   + GR++EA  +F++M  +N+V+WN+++SG+ QN ++ +A + F+ MP+RDV
Sbjct: 146 WNTMISGYAKNGRMDEALGLFNTMPEKNSVSWNAMVSGFLQNGDVVRAIEFFKRMPERDV 205

Query: 65  VSWNLMLSG 39
            S + ++SG
Sbjct: 206 TSLSALVSG 214



 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 31/74 (41%), Positives = 46/74 (62%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           D   WN  IS  +    + EA  +F  M S +T++WN +ISGYAQ+  +  A   FE MP
Sbjct: 316 DSFSWNTMISGYVHVLDMEEASNLFHKMPSPDTLSWNLMISGYAQSGSLELAHDFFERMP 375

Query: 77  QRDVVSWNLMLSGY 36
           Q+++VSWN +++GY
Sbjct: 376 QKNLVSWNSVIAGY 389



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRT-GR--LNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFE 87
           D   WN  IS  +   G+  + E R +FD M  R  V+WN++ISGYA+N  + +A  LF 
Sbjct: 108 DVVSWNLIISGYVSCRGKRFIEEGRNLFDKMPERCCVSWNTMISGYAKNGRMDEALGLFN 167

Query: 86  EMPQRDVVSWNLMLSGYM 33
            MP+++ VSWN M+SG++
Sbjct: 168 TMPEKNSVSWNAMVSGFL 185



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 13/84 (15%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSM-------------LSRNTVTWNSLISGYAQNREIAK 105
           +N  I+   + GR++EA+ +FD +               RN V+WN++I  Y +  ++  
Sbjct: 245 YNTLIAGYGQRGRVDEAQNLFDKIPFYNDQGKGRTGRFERNVVSWNTMIMCYVKAGDVIS 304

Query: 104 ARKLFEEMPQRDVVSWNLMLSGYM 33
           ARKLF++MP RD  SWN M+SGY+
Sbjct: 305 ARKLFDQMPDRDSFSWNTMISGYV 328


>ref|XP_007041730.1| Mitochondrial editing factor 9 isoform 1 [Theobroma cacao]
           gi|590683987|ref|XP_007041731.1| Mitochondrial editing
           factor 9 isoform 1 [Theobroma cacao]
           gi|508705665|gb|EOX97561.1| Mitochondrial editing factor
           9 isoform 1 [Theobroma cacao]
           gi|508705666|gb|EOX97562.1| Mitochondrial editing factor
           9 isoform 1 [Theobroma cacao]
          Length = 657

 Score =  126 bits (316), Expect = 4e-27
 Identities = 57/80 (71%), Positives = 70/80 (87%)
 Frame = -3

Query: 242 NKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDVV 63
           NK++SHLIRTG+LNEA+ VFD M  R+TVTWNS+ISGY + REIAKARKLF+EMP+RD+V
Sbjct: 46  NKRLSHLIRTGKLNEAKSVFDQMPQRDTVTWNSMISGYVKRREIAKARKLFDEMPKRDIV 105

Query: 62  SWNLMLSGYMSCRGSRHIEE 3
           SWNL++SGY SC G R +EE
Sbjct: 106 SWNLIISGYASCLGYRFLEE 125



 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 43/126 (34%), Positives = 68/126 (53%), Gaps = 10/126 (7%)
 Frame = -3

Query: 383 GWRRAHWKLSNSRVAACG----VDVTWVRSRYFNSVVYQSKQ--GEPLDFRQ----WNKK 234
           GWR    +  N+ +A  G    VD      R F+ + Y   Q  G   +F +    WN  
Sbjct: 231 GWREGLVQACNTLIAGYGQKGRVDDA---RRLFDQIPYNCVQMEGRKAEFERNVVSWNSM 287

Query: 233 ISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDVVSWN 54
           I   ++ G +  AR +FD M+ R+T++WN++I+GY Q  ++ +A  LF  MP+ D +SWN
Sbjct: 288 IMCYVKAGDIVSARELFDQMVERDTISWNTMINGYVQMSDMEEASNLFNTMPKPDSLSWN 347

Query: 53  LMLSGY 36
            M+SG+
Sbjct: 348 SMISGF 353



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 31/73 (42%), Positives = 48/73 (65%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           DF  WN  IS   + GR++EA R+F+SM  RN V+WN++I+G+ +N +   A + FE MP
Sbjct: 137 DFVSWNTMISGYAKNGRMDEAIRLFESMPERNVVSWNAMITGFLRNGDTVSATEYFERMP 196

Query: 77  QRDVVSWNLMLSG 39
           ++D  S +  +SG
Sbjct: 197 EQDSTSVSAFVSG 209



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 28/58 (48%), Positives = 46/58 (79%)
 Frame = -3

Query: 206 LNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDVVSWNLMLSGYM 33
           L E +++FD M  ++ V+WN++ISGYA+N  + +A +LFE MP+R+VVSWN M++G++
Sbjct: 123 LEEGKKLFDQMPRKDFVSWNTMISGYAKNGRMDEAIRLFESMPERNVVSWNAMITGFL 180



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 28/74 (37%), Positives = 49/74 (66%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           D   WN  I+  ++   + EA  +F++M   ++++WNS+ISG++Q   +  AR LFE+MP
Sbjct: 311 DTISWNTMINGYVQMSDMEEASNLFNTMPKPDSLSWNSMISGFSQLGRLELARDLFEKMP 370

Query: 77  QRDVVSWNLMLSGY 36
           Q+ +VSWN +++ Y
Sbjct: 371 QKHLVSWNSIIAAY 384



 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 31/83 (37%), Positives = 50/83 (60%), Gaps = 13/83 (15%)
 Frame = -3

Query: 242 NKKISHLIRTGRLNEARRVFDSM-------------LSRNTVTWNSLISGYAQNREIAKA 102
           N  I+   + GR+++ARR+FD +               RN V+WNS+I  Y +  +I  A
Sbjct: 241 NTLIAGYGQKGRVDDARRLFDQIPYNCVQMEGRKAEFERNVVSWNSMIMCYVKAGDIVSA 300

Query: 101 RKLFEEMPQRDVVSWNLMLSGYM 33
           R+LF++M +RD +SWN M++GY+
Sbjct: 301 RELFDQMVERDTISWNTMINGYV 323


>ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  126 bits (316), Expect = 4e-27
 Identities = 58/80 (72%), Positives = 72/80 (90%)
 Frame = -3

Query: 242 NKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDVV 63
           NKKIS+LIR+GRL+EAR +FDSM  R+TVTWNS+I+GY   REIA+AR+LF+EMP+RDVV
Sbjct: 43  NKKISNLIRSGRLSEARALFDSMKHRDTVTWNSMITGYVHRREIARARQLFDEMPRRDVV 102

Query: 62  SWNLMLSGYMSCRGSRHIEE 3
           SWNL++SGY SCRGSR +EE
Sbjct: 103 SWNLIVSGYFSCRGSRFVEE 122



 Score = 73.2 bits (178), Expect = 4e-11
 Identities = 31/70 (44%), Positives = 48/70 (68%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDV 66
           WN  +   ++ G +  AR +FD M+ ++T +WN++ISGY Q   + +A KLF EMP  DV
Sbjct: 278 WNSMMMCYVKAGDIVSARELFDRMVEQDTCSWNTMISGYVQISNMEEASKLFREMPIPDV 337

Query: 65  VSWNLMLSGY 36
           +SWNL++SG+
Sbjct: 338 LSWNLIVSGF 347



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 25/74 (33%), Positives = 46/74 (62%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           D   WN  IS  ++   + EA ++F  M   + ++WN ++SG+AQ  ++  A+  FE MP
Sbjct: 305 DTCSWNTMISGYVQISNMEEASKLFREMPIPDVLSWNLIVSGFAQKGDLNLAKDFFERMP 364

Query: 77  QRDVVSWNLMLSGY 36
            ++++SWN +++GY
Sbjct: 365 LKNLISWNSIIAGY 378



 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
 Frame = -3

Query: 257 DFRQWNKKISHLI--RTGR-LNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFE 87
           D   WN  +S     R  R + E RR+F+ M  R+ V+WN++ISGYA+N  + +A KLF 
Sbjct: 100 DVVSWNLIVSGYFSCRGSRFVEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLFN 159

Query: 86  EMPQRDVVSWNLMLSGYM 33
            MP+R+ VS N +++G++
Sbjct: 160 AMPERNAVSSNALITGFL 177



 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 13/84 (15%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSM-------------LSRNTVTWNSLISGYAQNREIAK 105
           +N  I+   + G + EARR+FD +               RN V+WNS++  Y +  +I  
Sbjct: 234 YNTLIAGYGQRGHVEEARRLFDGIPDDRGDGDEGQRRFRRNVVSWNSMMMCYVKAGDIVS 293

Query: 104 ARKLFEEMPQRDVVSWNLMLSGYM 33
           AR+LF+ M ++D  SWN M+SGY+
Sbjct: 294 ARELFDRMVEQDTCSWNTMISGYV 317


>ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Glycine max]
          Length = 649

 Score =  125 bits (314), Expect = 6e-27
 Identities = 58/82 (70%), Positives = 73/82 (89%)
 Frame = -3

Query: 248 QWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRD 69
           Q NKK+S+LIR+GR++EAR +FDSM  R+TVTWNS+ISGY Q REIA+AR+LF+EMP+RD
Sbjct: 40  QSNKKLSNLIRSGRISEARTLFDSMKRRDTVTWNSMISGYVQRREIARARQLFDEMPRRD 99

Query: 68  VVSWNLMLSGYMSCRGSRHIEE 3
           VVSWNL++SGY SC GSR +EE
Sbjct: 100 VVSWNLIVSGYFSCCGSRFVEE 121



 Score = 67.0 bits (162), Expect = 3e-09
 Identities = 30/69 (43%), Positives = 44/69 (63%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDV 66
           WN  +   ++ G +  AR +FD M+ R+  +WN+LIS Y Q   + +A KLF EMP  DV
Sbjct: 280 WNSMMMCYVKAGDIVFARELFDRMVERDNCSWNTLISCYVQISNMEEASKLFREMPSPDV 339

Query: 65  VSWNLMLSG 39
           +SWN ++SG
Sbjct: 340 LSWNSIISG 348



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 27/70 (38%), Positives = 46/70 (65%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDV 66
           WN  IS  ++   + EA ++F  M S + ++WNS+ISG AQ  ++  A+  FE MP +++
Sbjct: 311 WNTLISCYVQISNMEEASKLFREMPSPDVLSWNSIISGLAQKGDLNLAKDFFERMPHKNL 370

Query: 65  VSWNLMLSGY 36
           +SWN +++GY
Sbjct: 371 ISWNTIIAGY 380



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 25/58 (43%), Positives = 43/58 (74%)
 Frame = -3

Query: 206 LNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDVVSWNLMLSGYM 33
           + E RR+F+ M  R+ V+WN++ISGYA+N  + +A KLF  MP+ + VS+N +++G++
Sbjct: 119 VEEGRRLFELMPQRDCVSWNTVISGYAKNGRMDQALKLFNAMPEHNAVSYNAVITGFL 176


>ref|XP_007199439.1| hypothetical protein PRUPE_ppa026671mg [Prunus persica]
           gi|462394839|gb|EMJ00638.1| hypothetical protein
           PRUPE_ppa026671mg [Prunus persica]
          Length = 611

 Score =  121 bits (303), Expect = 1e-25
 Identities = 55/77 (71%), Positives = 67/77 (87%)
 Frame = -3

Query: 233 ISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDVVSWN 54
           ISHLIRTG++ +AR  FD M  RN VTWNS+I+GY + RE+AKARKLF+EMP+RDVVSWN
Sbjct: 3   ISHLIRTGQIAQAREDFDRMEQRNVVTWNSMITGYVKRREMAKARKLFDEMPERDVVSWN 62

Query: 53  LMLSGYMSCRGSRHIEE 3
           LM+SGY+SCRG R+IEE
Sbjct: 63  LMISGYISCRGDRYIEE 79



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 33/73 (45%), Positives = 48/73 (65%), Gaps = 3/73 (4%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQ---NREIAKARKLFEEMPQ 75
           WN  I+  ++   + +AR++FD M  R+ V+WN +ISGY     +R I + R LF++MP 
Sbjct: 30  WNSMITGYVKRREMAKARKLFDEMPERDVVSWNLMISGYISCRGDRYIEEGRSLFDQMPV 89

Query: 74  RDVVSWNLMLSGY 36
           RD VSWN M+SGY
Sbjct: 90  RDCVSWNTMISGY 102



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 29/70 (41%), Positives = 44/70 (62%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDV 66
           WN  I   ++TG +  AR +FD M  R+T +WN++ISGY    ++ +A  LF +MP  D 
Sbjct: 238 WNTMIMCYVKTGNIVSARELFDQMRERDTFSWNTMISGYVHASDMEQASSLFSKMPNPDA 297

Query: 65  VSWNLMLSGY 36
           +SWN ++ GY
Sbjct: 298 LSWNSLILGY 307



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 3/78 (3%)
 Frame = -3

Query: 257 DFRQWNKKISHLI--RTGR-LNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFE 87
           D   WN  IS  I  R  R + E R +FD M  R+ V+WN++ISGYA+N+ + +A +LF 
Sbjct: 57  DVVSWNLMISGYISCRGDRYIEEGRSLFDQMPVRDCVSWNTMISGYAKNQRMTEALQLFN 116

Query: 86  EMPQRDVVSWNLMLSGYM 33
            MP + VVSWN M++G++
Sbjct: 117 RMPNQSVVSWNAMITGFL 134



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 29/74 (39%), Positives = 45/74 (60%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           D   WN  IS  +    + +A  +F  M + + ++WNSLI GY+Q   +  A   FE+MP
Sbjct: 265 DTFSWNTMISGYVHASDMEQASSLFSKMPNPDALSWNSLILGYSQVGCLELAHDFFEKMP 324

Query: 77  QRDVVSWNLMLSGY 36
           Q+++VSWN M++GY
Sbjct: 325 QKNLVSWNSMIAGY 338



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 13/84 (15%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSM-------------LSRNTVTWNSLISGYAQNREIAK 105
           +N  I+   + GR+ EAR++FD +               RN V+WN++I  Y +   I  
Sbjct: 194 YNTLIAGYGQRGRVEEARKLFDQIPFLHQKGKEGNRRFERNVVSWNTMIMCYVKTGNIVS 253

Query: 104 ARKLFEEMPQRDVVSWNLMLSGYM 33
           AR+LF++M +RD  SWN M+SGY+
Sbjct: 254 ARELFDQMRERDTFSWNTMISGYV 277



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 34/109 (31%), Positives = 56/109 (51%)
 Frame = -3

Query: 365 WKLSNSRVAACGVDVTWVRSRYFNSVVYQSKQGEPLDFRQWNKKISHLIRTGRLNEARRV 186
           W L  S   +C  D      RY         Q    D   WN  IS   +  R+ EA ++
Sbjct: 61  WNLMISGYISCRGD------RYIEEGRSLFDQMPVRDCVSWNTMISGYAKNQRMTEALQL 114

Query: 185 FDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDVVSWNLMLSG 39
           F+ M +++ V+WN++I+G+ QN ++  A + FE +P+RD  S + ++SG
Sbjct: 115 FNRMPNQSVVSWNAMITGFLQNGDVVHAIEFFERIPERDRASLSALVSG 163


>gb|EYU17792.1| hypothetical protein MIMGU_mgv1a021010mg [Mimulus guttatus]
          Length = 599

 Score =  118 bits (296), Expect = 7e-25
 Identities = 50/77 (64%), Positives = 68/77 (88%)
 Frame = -3

Query: 233 ISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDVVSWN 54
           I+ +IR GR+ +AR +FD + +RNT+TWNS++SGY Q RE+A+ARKLF+EMP++DVVSWN
Sbjct: 3   ITEMIRGGRIEDARALFDKLSNRNTITWNSMLSGYVQRRELARARKLFDEMPKKDVVSWN 62

Query: 53  LMLSGYMSCRGSRHIEE 3
           LM+SGY+SCRG RH+EE
Sbjct: 63  LMISGYVSCRGWRHLEE 79



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 30/73 (41%), Positives = 47/73 (64%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           DF  WN  IS   + GR+++A R+FD M  +N VTWN++I+G+  N +  +A   F+ MP
Sbjct: 91  DFVSWNTMISGYAKNGRMDDALRLFDCMPEKNVVTWNAMITGFLNNGDAKRASDFFKRMP 150

Query: 77  QRDVVSWNLMLSG 39
           +RD  S + ++SG
Sbjct: 151 RRDAASLSALVSG 163



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQN---REIAKARKLFEEMPQ 75
           WN  +S  ++   L  AR++FD M  ++ V+WN +ISGY      R + + R LF+EM +
Sbjct: 30  WNSMLSGYVQRRELARARKLFDEMPKKDVVSWNLMISGYVSCRGWRHLEEGRSLFDEMHE 89

Query: 74  RDVVSWNLMLSGY 36
           RD VSWN M+SGY
Sbjct: 90  RDFVSWNTMISGY 102



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 3/79 (3%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTG---RLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFE 87
           D   WN  IS  +       L E R +FD M  R+ V+WN++ISGYA+N  +  A +LF+
Sbjct: 57  DVVSWNLMISGYVSCRGWRHLEEGRSLFDEMHERDFVSWNTMISGYAKNGRMDDALRLFD 116

Query: 86  EMPQRDVVSWNLMLSGYMS 30
            MP+++VV+WN M++G+++
Sbjct: 117 CMPEKNVVTWNAMITGFLN 135



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 30/72 (41%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSM-LSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRD 69
           +N  I+   + GR+ +A+R+F+ M   +N V++NS+I  YA+  +++ AR+LF++M  RD
Sbjct: 194 YNTLIAGYGQKGRVADAQRLFNQMGFEKNVVSYNSMIMSYAKAGDMSSARELFDQMNDRD 253

Query: 68  VVSWNLMLSGYM 33
            VSWN M+SGY+
Sbjct: 254 NVSWNTMISGYV 265



 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 28/70 (40%), Positives = 43/70 (61%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDV 66
           +N  I    + G ++ AR +FD M  R+ V+WN++ISGY    ++  A KLF EM   D 
Sbjct: 226 YNSMIMSYAKAGDMSSARELFDQMNDRDNVSWNTMISGYVHVSDMKAAVKLFYEMATPDA 285

Query: 65  VSWNLMLSGY 36
           +SWN ++SG+
Sbjct: 286 LSWNSIISGF 295



 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 28/81 (34%), Positives = 47/81 (58%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDV 66
           WN  IS  +    +  A ++F  M + + ++WNS+ISG+AQ  ++  A   F+ MPQ+ +
Sbjct: 257 WNTMISGYVHVSDMKAAVKLFYEMATPDALSWNSIISGFAQAGKMELALDYFQIMPQKSL 316

Query: 65  VSWNLMLSGYMSCRGSRHIEE 3
           VSWN +++GY    G +   E
Sbjct: 317 VSWNTIIAGYEKNAGFKEAIE 337


>gb|EPS71093.1| hypothetical protein M569_03667, partial [Genlisea aurea]
          Length = 607

 Score =  118 bits (295), Expect = 1e-24
 Identities = 51/83 (61%), Positives = 70/83 (84%)
 Frame = -3

Query: 251 RQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQR 72
           R  N+KI+ +I++GRL EAR  FDSM  RNT++WNS++SGY ++REI KAR+LF+EMP+R
Sbjct: 2   RSMNRKITDMIQSGRLEEARAFFDSMPFRNTISWNSMLSGYVRHREIVKARRLFDEMPKR 61

Query: 71  DVVSWNLMLSGYMSCRGSRHIEE 3
           DVVSWNLM+ GY++CR  R++EE
Sbjct: 62  DVVSWNLMIQGYVTCRSRRYVEE 84



 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 30/73 (41%), Positives = 49/73 (67%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           DF  WN  IS   + GR+ ++  +F  M  +NTVTWN++I+G+  N ++ KA +LF++MP
Sbjct: 96  DFVSWNTMISGYAKNGRIQDSFTLFTLMPDKNTVTWNAMITGFLSNGDVRKASELFKQMP 155

Query: 77  QRDVVSWNLMLSG 39
           +RD  S + ++SG
Sbjct: 156 RRDAASISALVSG 168



 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 33/93 (35%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
 Frame = -3

Query: 305 RYFNSVVYQSKQGEPLDFRQ---WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLIS 135
           R FN +     +G+    +    WN  +   +  G +  A  +FD ML R+ V+WN++IS
Sbjct: 217 RIFNGIPTNGNEGKTCFVKNTVSWNSMLMAYVMVGDMVSAAELFDGMLDRDIVSWNTMIS 276

Query: 134 GYAQNREIAKARKLFEEMPQRDVVSWNLMLSGY 36
           GY    ++  A KLF EMP  D +SWN ++SG+
Sbjct: 277 GYVHVSDMKTAEKLFSEMPLPDSLSWNSIISGF 309



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 28/85 (32%), Positives = 49/85 (57%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           D   WN  IS  +    +  A ++F  M   ++++WNS+ISG+AQ+  +  A + F  MP
Sbjct: 267 DIVSWNTMISGYVHVSDMKTAEKLFSEMPLPDSLSWNSIISGFAQDGNMGTALEYFHNMP 326

Query: 77  QRDVVSWNLMLSGYMSCRGSRHIEE 3
           +++++SWN ++SG+    G R   E
Sbjct: 327 EKNLISWNTVISGFDKNSGYREAIE 351



 Score = 63.2 bits (152), Expect = 4e-08
 Identities = 30/81 (37%), Positives = 51/81 (62%), Gaps = 10/81 (12%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLS----------RNTVTWNSLISGYAQNREIAKARK 96
           +N  I+   +TGR+++ARR+F+ + +          +NTV+WNS++  Y    ++  A +
Sbjct: 199 YNTLIAGYGQTGRVDDARRIFNGIPTNGNEGKTCFVKNTVSWNSMLMAYVMVGDMVSAAE 258

Query: 95  LFEEMPQRDVVSWNLMLSGYM 33
           LF+ M  RD+VSWN M+SGY+
Sbjct: 259 LFDGMLDRDIVSWNTMISGYV 279



 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
 Frame = -3

Query: 257 DFRQWNKKISHLI--RTGR-LNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFE 87
           D   WN  I   +  R+ R + E R +FD M  ++ V+WN++ISGYA+N  I  +  LF 
Sbjct: 62  DVVSWNLMIQGYVTCRSRRYVEEGRFLFDIMPEKDFVSWNTMISGYAKNGRIQDSFTLFT 121

Query: 86  EMPQRDVVSWNLMLSGYMS 30
            MP ++ V+WN M++G++S
Sbjct: 122 LMPDKNTVTWNAMITGFLS 140


>ref|XP_006475400.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like isoform X1 [Citrus sinensis]
           gi|568842976|ref|XP_006475401.1| PREDICTED:
           pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 670

 Score =  116 bits (291), Expect = 3e-24
 Identities = 56/85 (65%), Positives = 66/85 (77%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           DF    K+I+HLIRT RL EAR VFD    RNT TWN +ISGY + RE+AKARKLF+EMP
Sbjct: 54  DFHAQIKRITHLIRTNRLTEARAVFDQTEQRNTKTWNVMISGYVKRREMAKARKLFDEMP 113

Query: 77  QRDVVSWNLMLSGYMSCRGSRHIEE 3
           QRDVVSWN+M+SGY+S  GS  +EE
Sbjct: 114 QRDVVSWNVMISGYISSSGSGFLEE 138



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 39/78 (50%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRT---GRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFE 87
           D   WN  IS  I +   G L EAR +FD M  R+ VTWN++ISGYA+  E+ +A +LF 
Sbjct: 116 DVVSWNVMISGYISSSGSGFLEEARYLFDIMPERDCVTWNTVISGYAKTGEMEEALRLFN 175

Query: 86  EMPQRDVVSWNLMLSGYM 33
            MP R+VVSWN M+SG++
Sbjct: 176 SMPARNVVSWNAMISGFL 193



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 32/69 (46%), Positives = 48/69 (69%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDV 66
           WN  IS   +TG + EA R+F+SM +RN V+WN++ISG+ QN ++A A + F+ MP RD 
Sbjct: 154 WNTVISGYAKTGEMEEALRLFNSMPARNVVSWNAMISGFLQNGDVANAIEFFDRMPGRDS 213

Query: 65  VSWNLMLSG 39
            S + ++SG
Sbjct: 214 ASLSALVSG 222



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
 Frame = -3

Query: 272 QGEPLDFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNRE---IAKA 102
           Q E  + + WN  IS  ++   + +AR++FD M  R+ V+WN +ISGY  +     + +A
Sbjct: 80  QTEQRNTKTWNVMISGYVKRREMAKARKLFDEMPQRDVVSWNVMISGYISSSGSGFLEEA 139

Query: 101 RKLFEEMPQRDVVSWNLMLSGY 36
           R LF+ MP+RD V+WN ++SGY
Sbjct: 140 RYLFDIMPERDCVTWNTVISGY 161



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 29/70 (41%), Positives = 44/70 (62%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDV 66
           WN  I    + G +  AR +F+ ML R+T +WN++ISGY    ++ +A  LF +MP  D 
Sbjct: 296 WNSMIMCYAKAGDVVSAREIFEQMLERDTFSWNTMISGYIHVLDMEEASNLFVKMPHPDT 355

Query: 65  VSWNLMLSGY 36
           ++WN M+SGY
Sbjct: 356 LTWNAMVSGY 365



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 12/91 (13%)
 Frame = -3

Query: 269 GEPLDFRQWNKKISHLIRTGRLNEARRVFDSM------------LSRNTVTWNSLISGYA 126
           GE L  R +N  I    + GR+ EAR++FD +              RN V+WNS+I  YA
Sbjct: 246 GEDL-VRAYNTLIVGYGQRGRVEEARKLFDKIPVNCDRGEGNVRFKRNIVSWNSMIMCYA 304

Query: 125 QNREIAKARKLFEEMPQRDVVSWNLMLSGYM 33
           +  ++  AR++FE+M +RD  SWN M+SGY+
Sbjct: 305 KAGDVVSAREIFEQMLERDTFSWNTMISGYI 335



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 30/73 (41%), Positives = 44/73 (60%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           D   WN  IS  I    + EA  +F  M   +T+TWN+++SGYAQ   +  A   F+ MP
Sbjct: 323 DTFSWNTMISGYIHVLDMEEASNLFVKMPHPDTLTWNAMVSGYAQIGNLELALDFFKRMP 382

Query: 77  QRDVVSWNLMLSG 39
           Q+++VSWN M++G
Sbjct: 383 QKNLVSWNSMIAG 395


>ref|XP_006451414.1| hypothetical protein CICLE_v10007675mg [Citrus clementina]
           gi|557554640|gb|ESR64654.1| hypothetical protein
           CICLE_v10007675mg [Citrus clementina]
          Length = 662

 Score =  116 bits (291), Expect = 3e-24
 Identities = 56/85 (65%), Positives = 66/85 (77%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           DF    K+I+HLIRT RL EAR VFD    RNT TWN +ISGY + RE+AKARKLF+EMP
Sbjct: 46  DFHAQIKRITHLIRTNRLTEARAVFDQTEQRNTKTWNVMISGYVKRREMAKARKLFDEMP 105

Query: 77  QRDVVSWNLMLSGYMSCRGSRHIEE 3
           QRDVVSWN+M+SGY+S  GS  +EE
Sbjct: 106 QRDVVSWNVMISGYISSSGSGFLEE 130



 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 39/78 (50%), Positives = 52/78 (66%), Gaps = 3/78 (3%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRT---GRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFE 87
           D   WN  IS  I +   G L EAR +FD M  R+ VTWN++ISGYA+  E+ +A +LF 
Sbjct: 108 DVVSWNVMISGYISSSGSGFLEEARYLFDIMPERDCVTWNTVISGYAKTGEMEEALRLFN 167

Query: 86  EMPQRDVVSWNLMLSGYM 33
            MP R+VVSWN M+SG++
Sbjct: 168 SMPARNVVSWNAMISGFL 185



 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 32/69 (46%), Positives = 48/69 (69%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDV 66
           WN  IS   +TG + EA R+F+SM +RN V+WN++ISG+ QN ++A A + F+ MP RD 
Sbjct: 146 WNTVISGYAKTGEMEEALRLFNSMPARNVVSWNAMISGFLQNGDVANAIEFFDRMPGRDS 205

Query: 65  VSWNLMLSG 39
            S + ++SG
Sbjct: 206 ASLSALVSG 214



 Score = 69.3 bits (168), Expect = 5e-10
 Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
 Frame = -3

Query: 272 QGEPLDFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNRE---IAKA 102
           Q E  + + WN  IS  ++   + +AR++FD M  R+ V+WN +ISGY  +     + +A
Sbjct: 72  QTEQRNTKTWNVMISGYVKRREMAKARKLFDEMPQRDVVSWNVMISGYISSSGSGFLEEA 131

Query: 101 RKLFEEMPQRDVVSWNLMLSGY 36
           R LF+ MP+RD V+WN ++SGY
Sbjct: 132 RYLFDIMPERDCVTWNTVISGY 153



 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 29/70 (41%), Positives = 44/70 (62%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDV 66
           WN  I    + G +  AR +F+ ML R+T +WN++ISGY    ++ +A  LF +MP  D 
Sbjct: 288 WNSMIMCYAKAGDVVSAREIFEQMLERDTFSWNTMISGYIHVLDMEEASNLFVKMPHPDT 347

Query: 65  VSWNLMLSGY 36
           ++WN M+SGY
Sbjct: 348 LTWNAMVSGY 357



 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 12/91 (13%)
 Frame = -3

Query: 269 GEPLDFRQWNKKISHLIRTGRLNEARRVFDSM------------LSRNTVTWNSLISGYA 126
           GE L  R +N  I    + GR+ EAR++FD +              RN V+WNS+I  YA
Sbjct: 238 GEDL-VRAYNTLIVGYGQRGRVEEARKLFDKIPVNCDRGEGNVRFKRNIVSWNSMIMCYA 296

Query: 125 QNREIAKARKLFEEMPQRDVVSWNLMLSGYM 33
           +  ++  AR++FE+M +RD  SWN M+SGY+
Sbjct: 297 KAGDVVSAREIFEQMLERDTFSWNTMISGYI 327



 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 30/73 (41%), Positives = 44/73 (60%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           D   WN  IS  I    + EA  +F  M   +T+TWN+++SGYAQ   +  A   F+ MP
Sbjct: 315 DTFSWNTMISGYIHVLDMEEASNLFVKMPHPDTLTWNAMVSGYAQIGNLELALDFFKRMP 374

Query: 77  QRDVVSWNLMLSG 39
           Q+++VSWN M++G
Sbjct: 375 QKNLVSWNSMIAG 387


>ref|XP_004168978.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Cucumis sativus]
          Length = 664

 Score =  114 bits (284), Expect = 2e-23
 Identities = 52/79 (65%), Positives = 64/79 (81%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           +F   NKKIS+LIRTGR+NEAR +FDS    NT+TWN +I+ Y + RE+ KAR+LFEEMP
Sbjct: 56  EFYSLNKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMP 115

Query: 77  QRDVVSWNLMLSGYMSCRG 21
            RD+VSWNLMLSGY+SC G
Sbjct: 116 NRDIVSWNLMLSGYISCGG 134



 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 31/70 (44%), Positives = 47/70 (67%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDV 66
           WN  I   +R G +  AR +FD M+ R+T +WN++ISGY Q  ++ +A  LF  MP+ D 
Sbjct: 292 WNSMIMCYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEPDT 351

Query: 65  VSWNLMLSGY 36
           +SWN+M+SG+
Sbjct: 352 LSWNMMISGF 361



 Score = 74.7 bits (182), Expect = 1e-11
 Identities = 37/87 (42%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGR--LNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEE 84
           D   WN  +S  I  G   +  AR +FD M   + V+WN+++SGYA++  + KA +LF E
Sbjct: 118 DIVSWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGTMDKAEELFNE 177

Query: 83  MPQRDVVSWNLMLSGYMSCRGSRHIEE 3
           MP+R+VVSWN M+SGY+    + H+E+
Sbjct: 178 MPERNVVSWNAMVSGYLM---NGHVEK 201



 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 33/109 (30%), Positives = 54/109 (49%)
 Frame = -3

Query: 365 WKLSNSRVAACGVDVTWVRSRYFNSVVYQSKQGEPLDFRQWNKKISHLIRTGRLNEARRV 186
           W L  S   +CG        ++         Q    D   WN  +S   ++G +++A  +
Sbjct: 122 WNLMLSGYISCG-------GKFVERARNMFDQMPETDCVSWNTMLSGYAKSGTMDKAEEL 174

Query: 185 FDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDVVSWNLMLSG 39
           F+ M  RN V+WN+++SGY  N  + KA + F+ MP+RD  S   ++SG
Sbjct: 175 FNEMPERNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALVSG 223



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 27/74 (36%), Positives = 45/74 (60%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           D   WN  IS  ++   + EA  +F  M   +T++WN +ISG+++   +  A  LF+ +P
Sbjct: 319 DTFSWNTMISGYVQILDMKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIP 378

Query: 77  QRDVVSWNLMLSGY 36
           ++ +VSWN M+SGY
Sbjct: 379 EKSLVSWNSMISGY 392



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 8/79 (10%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSM--------LSRNTVTWNSLISGYAQNREIAKARKLF 90
           +N  I+   + G   EAR++FD +          RN ++WNS+I  Y +  +I  AR+LF
Sbjct: 253 YNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSARELF 312

Query: 89  EEMPQRDVVSWNLMLSGYM 33
           ++M +RD  SWN M+SGY+
Sbjct: 313 DKMVERDTFSWNTMISGYV 331


>ref|XP_004144924.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Cucumis sativus]
          Length = 664

 Score =  114 bits (284), Expect = 2e-23
 Identities = 52/79 (65%), Positives = 64/79 (81%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           +F   NKKIS+LIRTGR+NEAR +FDS    NT+TWN +I+ Y + RE+ KAR+LFEEMP
Sbjct: 56  EFYSLNKKISYLIRTGRINEARELFDSTEHWNTITWNRMITAYVKRREMLKARQLFEEMP 115

Query: 77  QRDVVSWNLMLSGYMSCRG 21
            RD+VSWNLMLSGY+SC G
Sbjct: 116 NRDIVSWNLMLSGYISCGG 134



 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 31/70 (44%), Positives = 47/70 (67%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDV 66
           WN  I   +R G +  AR +FD M+ R+T +WN++ISGY Q  ++ +A  LF  MP+ D 
Sbjct: 292 WNSMIMCYVRAGDIVSARELFDKMVERDTFSWNTMISGYVQILDMKEASNLFSRMPEPDT 351

Query: 65  VSWNLMLSGY 36
           +SWN+M+SG+
Sbjct: 352 LSWNMMISGF 361



 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 37/87 (42%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGR--LNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEE 84
           D   WN  +S  I  G   +  AR +FD M   + V+WN+++SGYA++  + KA +LF E
Sbjct: 118 DIVSWNLMLSGYISCGGKFVERARNMFDQMPETDCVSWNTMLSGYAKSGMMDKAEELFNE 177

Query: 83  MPQRDVVSWNLMLSGYMSCRGSRHIEE 3
           MP+R+VVSWN M+SGY+    + H+E+
Sbjct: 178 MPERNVVSWNAMVSGYLM---NGHVEK 201



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 33/109 (30%), Positives = 54/109 (49%)
 Frame = -3

Query: 365 WKLSNSRVAACGVDVTWVRSRYFNSVVYQSKQGEPLDFRQWNKKISHLIRTGRLNEARRV 186
           W L  S   +CG        ++         Q    D   WN  +S   ++G +++A  +
Sbjct: 122 WNLMLSGYISCG-------GKFVERARNMFDQMPETDCVSWNTMLSGYAKSGMMDKAEEL 174

Query: 185 FDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMPQRDVVSWNLMLSG 39
           F+ M  RN V+WN+++SGY  N  + KA + F+ MP+RD  S   ++SG
Sbjct: 175 FNEMPERNVVSWNAMVSGYLMNGHVEKAIEFFKLMPKRDSASLRALISG 223



 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 27/74 (36%), Positives = 45/74 (60%)
 Frame = -3

Query: 257 DFRQWNKKISHLIRTGRLNEARRVFDSMLSRNTVTWNSLISGYAQNREIAKARKLFEEMP 78
           D   WN  IS  ++   + EA  +F  M   +T++WN +ISG+++   +  A  LF+ +P
Sbjct: 319 DTFSWNTMISGYVQILDMKEASNLFSRMPEPDTLSWNMMISGFSEIGSLKLAHDLFKRIP 378

Query: 77  QRDVVSWNLMLSGY 36
           ++ +VSWN M+SGY
Sbjct: 379 EKSLVSWNSMISGY 392



 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 8/79 (10%)
 Frame = -3

Query: 245 WNKKISHLIRTGRLNEARRVFDSM--------LSRNTVTWNSLISGYAQNREIAKARKLF 90
           +N  I+   + G   EAR++FD +          RN ++WNS+I  Y +  +I  AR+LF
Sbjct: 253 YNTLIAGYGQKGMAYEARKLFDRIPLCCDCGYSRRNVISWNSMIMCYVRAGDIVSARELF 312

Query: 89  EEMPQRDVVSWNLMLSGYM 33
           ++M +RD  SWN M+SGY+
Sbjct: 313 DKMVERDTFSWNTMISGYV 331