BLASTX nr result
ID: Sinomenium22_contig00014868
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00014868
(1446 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006470826.1| PREDICTED: auxin response factor 1-like isof... 107 2e-20
ref|XP_006470825.1| PREDICTED: auxin response factor 1-like isof... 107 2e-20
ref|XP_006470824.1| PREDICTED: auxin response factor 1-like isof... 107 2e-20
ref|XP_006470822.1| PREDICTED: auxin response factor 1-like isof... 107 2e-20
ref|XP_006431443.1| hypothetical protein CICLE_v10000491mg [Citr... 107 2e-20
gb|ACX68650.3| auxin response factor [Dimocarpus longan] 104 9e-20
gb|EPS68815.1| auxin response factor 1 [Genlisea aurea] 104 1e-19
ref|XP_006392241.1| hypothetical protein EUTSA_v10023326mg [Eutr... 102 3e-19
ref|XP_002446522.1| hypothetical protein SORBIDRAFT_06g017490 [S... 102 3e-19
ref|XP_002268348.1| PREDICTED: auxin response factor 1 [Vitis vi... 102 3e-19
ref|XP_004975691.1| PREDICTED: auxin response factor 9-like [Set... 102 4e-19
ref|NP_001234871.1| auxin response factor 1 [Solanum lycopersicu... 102 6e-19
ref|XP_006385188.1| auxin response factor 1 family protein [Popu... 100 1e-18
ref|XP_006653437.1| PREDICTED: auxin response factor 9-like [Ory... 100 2e-18
ref|XP_006300434.1| hypothetical protein CARUB_v10022415mg [Caps... 100 2e-18
pdb|4LDY|A Chain A, Crystal Structure Of The Dna Binding Domain ... 99 4e-18
pdb|4LDX|A Chain A, Crystal Structure Of The Dna Binding Domain ... 99 4e-18
pdb|4LDV|A Chain A, Crystal Structure Of The Dna Binding Domain ... 99 4e-18
gb|AAM91657.1| auxin response factor 1 [Arabidopsis thaliana] 99 4e-18
ref|NP_849830.1| auxin response factor 1 [Arabidopsis thaliana] ... 99 4e-18
>ref|XP_006470826.1| PREDICTED: auxin response factor 1-like isoform X5 [Citrus sinensis]
Length = 640
Score = 107 bits (266), Expect = 2e-20
Identities = 51/77 (66%), Positives = 60/77 (77%)
Frame = +3
Query: 1215 FMALAPSYNSSTGGEGEPNSGELSNILYRELWYACAGPLVTVPHVGERVYYFPQGHMEQL 1394
F A A N ++GG P +G ++ LYRELW+ACAGPLVT+P GERVYYFPQGHMEQL
Sbjct: 3 FAAAAAPLNHASGG---PRTGGSNDALYRELWHACAGPLVTLPREGERVYYFPQGHMEQL 59
Query: 1395 EASTHQSLDQKMPSFNL 1445
EAS HQ L+Q+MPSFNL
Sbjct: 60 EASMHQGLEQQMPSFNL 76
>ref|XP_006470825.1| PREDICTED: auxin response factor 1-like isoform X4 [Citrus sinensis]
Length = 650
Score = 107 bits (266), Expect = 2e-20
Identities = 51/77 (66%), Positives = 60/77 (77%)
Frame = +3
Query: 1215 FMALAPSYNSSTGGEGEPNSGELSNILYRELWYACAGPLVTVPHVGERVYYFPQGHMEQL 1394
F A A N ++GG P +G ++ LYRELW+ACAGPLVT+P GERVYYFPQGHMEQL
Sbjct: 3 FAAAAAPLNHASGG---PRTGGSNDALYRELWHACAGPLVTLPREGERVYYFPQGHMEQL 59
Query: 1395 EASTHQSLDQKMPSFNL 1445
EAS HQ L+Q+MPSFNL
Sbjct: 60 EASMHQGLEQQMPSFNL 76
>ref|XP_006470824.1| PREDICTED: auxin response factor 1-like isoform X3 [Citrus sinensis]
Length = 678
Score = 107 bits (266), Expect = 2e-20
Identities = 51/77 (66%), Positives = 60/77 (77%)
Frame = +3
Query: 1215 FMALAPSYNSSTGGEGEPNSGELSNILYRELWYACAGPLVTVPHVGERVYYFPQGHMEQL 1394
F A A N ++GG P +G ++ LYRELW+ACAGPLVT+P GERVYYFPQGHMEQL
Sbjct: 3 FAAAAAPLNHASGG---PRTGGSNDALYRELWHACAGPLVTLPREGERVYYFPQGHMEQL 59
Query: 1395 EASTHQSLDQKMPSFNL 1445
EAS HQ L+Q+MPSFNL
Sbjct: 60 EASMHQGLEQQMPSFNL 76
>ref|XP_006470822.1| PREDICTED: auxin response factor 1-like isoform X1 [Citrus sinensis]
gi|568833260|ref|XP_006470823.1| PREDICTED: auxin
response factor 1-like isoform X2 [Citrus sinensis]
Length = 688
Score = 107 bits (266), Expect = 2e-20
Identities = 51/77 (66%), Positives = 60/77 (77%)
Frame = +3
Query: 1215 FMALAPSYNSSTGGEGEPNSGELSNILYRELWYACAGPLVTVPHVGERVYYFPQGHMEQL 1394
F A A N ++GG P +G ++ LYRELW+ACAGPLVT+P GERVYYFPQGHMEQL
Sbjct: 3 FAAAAAPLNHASGG---PRTGGSNDALYRELWHACAGPLVTLPREGERVYYFPQGHMEQL 59
Query: 1395 EASTHQSLDQKMPSFNL 1445
EAS HQ L+Q+MPSFNL
Sbjct: 60 EASMHQGLEQQMPSFNL 76
>ref|XP_006431443.1| hypothetical protein CICLE_v10000491mg [Citrus clementina]
gi|557533565|gb|ESR44683.1| hypothetical protein
CICLE_v10000491mg [Citrus clementina]
Length = 682
Score = 107 bits (266), Expect = 2e-20
Identities = 51/77 (66%), Positives = 60/77 (77%)
Frame = +3
Query: 1215 FMALAPSYNSSTGGEGEPNSGELSNILYRELWYACAGPLVTVPHVGERVYYFPQGHMEQL 1394
F A A N ++GG P +G ++ LYRELW+ACAGPLVT+P GERVYYFPQGHMEQL
Sbjct: 3 FAAAAAPLNHASGG---PRTGGSNDALYRELWHACAGPLVTLPREGERVYYFPQGHMEQL 59
Query: 1395 EASTHQSLDQKMPSFNL 1445
EAS HQ L+Q+MPSFNL
Sbjct: 60 EASMHQGLEQQMPSFNL 76
>gb|ACX68650.3| auxin response factor [Dimocarpus longan]
Length = 681
Score = 104 bits (260), Expect = 9e-20
Identities = 51/75 (68%), Positives = 59/75 (78%)
Frame = +3
Query: 1221 ALAPSYNSSTGGEGEPNSGELSNILYRELWYACAGPLVTVPHVGERVYYFPQGHMEQLEA 1400
A A N S+GG P SG ++ LYRELW+ACAGPLV++P GERVYYFPQGHMEQLEA
Sbjct: 6 AAAAPLNHSSGG---PLSGGSTDALYRELWHACAGPLVSLPREGERVYYFPQGHMEQLEA 62
Query: 1401 STHQSLDQKMPSFNL 1445
S HQ L+Q+MPSFNL
Sbjct: 63 SMHQGLEQQMPSFNL 77
>gb|EPS68815.1| auxin response factor 1 [Genlisea aurea]
Length = 428
Score = 104 bits (259), Expect = 1e-19
Identities = 51/76 (67%), Positives = 62/76 (81%)
Frame = +3
Query: 1218 MALAPSYNSSTGGEGEPNSGELSNILYRELWYACAGPLVTVPHVGERVYYFPQGHMEQLE 1397
MAL P+ +S GG +G ++ LYRELW+ACAGPLV+VPH GERVYYFPQGHMEQLE
Sbjct: 1 MALIPT-SSLCGGR---QTGPANDALYRELWHACAGPLVSVPHEGERVYYFPQGHMEQLE 56
Query: 1398 ASTHQSLDQKMPSFNL 1445
AS HQ+LDQ++PSF+L
Sbjct: 57 ASMHQALDQQLPSFDL 72
>ref|XP_006392241.1| hypothetical protein EUTSA_v10023326mg [Eutrema salsugineum]
gi|567129362|ref|XP_006392242.1| hypothetical protein
EUTSA_v10023326mg [Eutrema salsugineum]
gi|557088747|gb|ESQ29527.1| hypothetical protein
EUTSA_v10023326mg [Eutrema salsugineum]
gi|557088748|gb|ESQ29528.1| hypothetical protein
EUTSA_v10023326mg [Eutrema salsugineum]
Length = 667
Score = 102 bits (255), Expect = 3e-19
Identities = 48/68 (70%), Positives = 56/68 (82%)
Frame = +3
Query: 1242 SSTGGEGEPNSGELSNILYRELWYACAGPLVTVPHVGERVYYFPQGHMEQLEASTHQSLD 1421
+S G+P G LS+ LYRELW+ACAGPLVT+P GERVYYFP+GHMEQLEAS HQ L+
Sbjct: 7 ASNHSSGKPG-GVLSDALYRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLE 65
Query: 1422 QKMPSFNL 1445
Q+MPSFNL
Sbjct: 66 QQMPSFNL 73
>ref|XP_002446522.1| hypothetical protein SORBIDRAFT_06g017490 [Sorghum bicolor]
gi|241937705|gb|EES10850.1| hypothetical protein
SORBIDRAFT_06g017490 [Sorghum bicolor]
Length = 661
Score = 102 bits (255), Expect = 3e-19
Identities = 50/73 (68%), Positives = 56/73 (76%)
Frame = +3
Query: 1227 APSYNSSTGGEGEPNSGELSNILYRELWYACAGPLVTVPHVGERVYYFPQGHMEQLEAST 1406
AP+ ++ G G P S+ LYRELW+ACAGPLVTVP GERVYYFPQGHMEQLEAST
Sbjct: 7 APNPAAAAGSGGMP-----SDALYRELWHACAGPLVTVPRQGERVYYFPQGHMEQLEAST 61
Query: 1407 HQSLDQKMPSFNL 1445
HQ LDQ +P FNL
Sbjct: 62 HQQLDQYLPMFNL 74
>ref|XP_002268348.1| PREDICTED: auxin response factor 1 [Vitis vinifera]
gi|297739458|emb|CBI29640.3| unnamed protein product
[Vitis vinifera]
Length = 678
Score = 102 bits (255), Expect = 3e-19
Identities = 54/77 (70%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = +3
Query: 1218 MALAPSYNSSTGGEGEPNSGELSNILYRELWYACAGPLVTVPHVGERVYYFPQGHMEQLE 1397
MAL S N +GG P++G + LY+ELW+ACAGPLVTVP GERVYYFPQGHMEQLE
Sbjct: 1 MALVAS-NYPSGG---PHAGAPCDALYKELWHACAGPLVTVPREGERVYYFPQGHMEQLE 56
Query: 1398 AS-THQSLDQKMPSFNL 1445
AS THQ LDQ+MPSFNL
Sbjct: 57 ASTTHQGLDQQMPSFNL 73
>ref|XP_004975691.1| PREDICTED: auxin response factor 9-like [Setaria italica]
Length = 663
Score = 102 bits (254), Expect = 4e-19
Identities = 47/59 (79%), Positives = 51/59 (86%)
Frame = +3
Query: 1269 NSGELSNILYRELWYACAGPLVTVPHVGERVYYFPQGHMEQLEASTHQSLDQKMPSFNL 1445
+SG S+ LYRELW+ACAGPLVTVP GERVYYFPQGHMEQLEASTHQ LDQ +P FNL
Sbjct: 15 SSGMSSDALYRELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASTHQQLDQYLPMFNL 73
>ref|NP_001234871.1| auxin response factor 1 [Solanum lycopersicum]
gi|299118178|gb|ADJ10892.1| auxin response factor 1
[Solanum lycopersicum]
Length = 654
Score = 102 bits (253), Expect = 6e-19
Identities = 46/64 (71%), Positives = 51/64 (79%)
Frame = +3
Query: 1254 GEGEPNSGELSNILYRELWYACAGPLVTVPHVGERVYYFPQGHMEQLEASTHQSLDQKMP 1433
G G +N LY+ELW+ACAGPLVTVP GERVYYFPQGHMEQLEASTHQ +DQ +P
Sbjct: 10 GGGTHPGASANNALYKELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTHQGVDQHLP 69
Query: 1434 SFNL 1445
SFNL
Sbjct: 70 SFNL 73
>ref|XP_006385188.1| auxin response factor 1 family protein [Populus trichocarpa]
gi|550342079|gb|ERP62985.1| auxin response factor 1
family protein [Populus trichocarpa]
Length = 660
Score = 100 bits (250), Expect = 1e-18
Identities = 44/62 (70%), Positives = 53/62 (85%)
Frame = +3
Query: 1260 GEPNSGELSNILYRELWYACAGPLVTVPHVGERVYYFPQGHMEQLEASTHQSLDQKMPSF 1439
G P+ G ++ LY+ELW+ACAGPLVT+P GERVYYFPQGHMEQLEAS HQ ++Q+MPSF
Sbjct: 7 GNPHPGGCNDALYKELWHACAGPLVTLPCEGERVYYFPQGHMEQLEASMHQGMEQQMPSF 66
Query: 1440 NL 1445
NL
Sbjct: 67 NL 68
>ref|XP_006653437.1| PREDICTED: auxin response factor 9-like [Oryza brachyantha]
Length = 673
Score = 100 bits (248), Expect = 2e-18
Identities = 50/76 (65%), Positives = 57/76 (75%)
Frame = +3
Query: 1218 MALAPSYNSSTGGEGEPNSGELSNILYRELWYACAGPLVTVPHVGERVYYFPQGHMEQLE 1397
MA A ++ GG SG S+ L+RELW+ACAGPLVTVP GERVYYFPQGHMEQLE
Sbjct: 1 MAAAMEMAANPGG----GSGSCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLE 56
Query: 1398 ASTHQSLDQKMPSFNL 1445
AST+Q LDQ +P FNL
Sbjct: 57 ASTNQQLDQYLPMFNL 72
>ref|XP_006300434.1| hypothetical protein CARUB_v10022415mg [Capsella rubella]
gi|482569144|gb|EOA33332.1| hypothetical protein
CARUB_v10022415mg [Capsella rubella]
Length = 665
Score = 100 bits (248), Expect = 2e-18
Identities = 46/68 (67%), Positives = 54/68 (79%)
Frame = +3
Query: 1242 SSTGGEGEPNSGELSNILYRELWYACAGPLVTVPHVGERVYYFPQGHMEQLEASTHQSLD 1421
++T E G LS+ L RELW+ACAGPLVT+P GERVYYFP+GHMEQLEAS HQ L+
Sbjct: 2 AATNPSSEKPGGVLSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLE 61
Query: 1422 QKMPSFNL 1445
Q+MPSFNL
Sbjct: 62 QQMPSFNL 69
>pdb|4LDY|A Chain A, Crystal Structure Of The Dna Binding Domain Of The G245a
Mutant Of Arabidopsis Thaliana Auxin Reponse Factor 1
gi|584579802|pdb|4LDY|B Chain B, Crystal Structure Of The
Dna Binding Domain Of The G245a Mutant Of Arabidopsis
Thaliana Auxin Reponse Factor 1
Length = 362
Score = 99.4 bits (246), Expect = 4e-18
Identities = 47/68 (69%), Positives = 55/68 (80%)
Frame = +3
Query: 1242 SSTGGEGEPNSGELSNILYRELWYACAGPLVTVPHVGERVYYFPQGHMEQLEASTHQSLD 1421
+S G+P G LS+ L RELW+ACAGPLVT+P GERVYYFP+GHMEQLEAS HQ L+
Sbjct: 3 ASNHSSGKPG-GVLSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLE 61
Query: 1422 QKMPSFNL 1445
Q+MPSFNL
Sbjct: 62 QQMPSFNL 69
>pdb|4LDX|A Chain A, Crystal Structure Of The Dna Binding Domain Of Arabidopsis
Thaliana Auxin Response Factor 1 (arf1) In Complex With
Protomor-like Sequence Er7 gi|584579798|pdb|4LDX|B Chain
B, Crystal Structure Of The Dna Binding Domain Of
Arabidopsis Thaliana Auxin Response Factor 1 (arf1) In
Complex With Protomor-like Sequence Er7
Length = 363
Score = 99.4 bits (246), Expect = 4e-18
Identities = 47/68 (69%), Positives = 55/68 (80%)
Frame = +3
Query: 1242 SSTGGEGEPNSGELSNILYRELWYACAGPLVTVPHVGERVYYFPQGHMEQLEASTHQSLD 1421
+S G+P G LS+ L RELW+ACAGPLVT+P GERVYYFP+GHMEQLEAS HQ L+
Sbjct: 3 ASNHSSGKPG-GVLSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLE 61
Query: 1422 QKMPSFNL 1445
Q+MPSFNL
Sbjct: 62 QQMPSFNL 69
>pdb|4LDV|A Chain A, Crystal Structure Of The Dna Binding Domain Of A. Thailana
Auxin Response Factor 1 gi|584579795|pdb|4LDW|A Chain A,
Crystal Structure Of The Dna Binding Domain Of
Arabidopsis Thaliana Auxin Response Factor 1, P21
Structure gi|584579796|pdb|4LDW|B Chain B, Crystal
Structure Of The Dna Binding Domain Of Arabidopsis
Thaliana Auxin Response Factor 1, P21 Structure
Length = 362
Score = 99.4 bits (246), Expect = 4e-18
Identities = 47/68 (69%), Positives = 55/68 (80%)
Frame = +3
Query: 1242 SSTGGEGEPNSGELSNILYRELWYACAGPLVTVPHVGERVYYFPQGHMEQLEASTHQSLD 1421
+S G+P G LS+ L RELW+ACAGPLVT+P GERVYYFP+GHMEQLEAS HQ L+
Sbjct: 3 ASNHSSGKPG-GVLSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLE 61
Query: 1422 QKMPSFNL 1445
Q+MPSFNL
Sbjct: 62 QQMPSFNL 69
>gb|AAM91657.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 662
Score = 99.4 bits (246), Expect = 4e-18
Identities = 47/68 (69%), Positives = 55/68 (80%)
Frame = +3
Query: 1242 SSTGGEGEPNSGELSNILYRELWYACAGPLVTVPHVGERVYYFPQGHMEQLEASTHQSLD 1421
+S G+P G LS+ L RELW+ACAGPLVT+P GERVYYFP+GHMEQLEAS HQ L+
Sbjct: 3 ASNHSSGKPG-GVLSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLE 61
Query: 1422 QKMPSFNL 1445
Q+MPSFNL
Sbjct: 62 QQMPSFNL 69
>ref|NP_849830.1| auxin response factor 1 [Arabidopsis thaliana]
gi|332195492|gb|AEE33613.1| auxin response factor 1
[Arabidopsis thaliana]
Length = 662
Score = 99.4 bits (246), Expect = 4e-18
Identities = 47/68 (69%), Positives = 55/68 (80%)
Frame = +3
Query: 1242 SSTGGEGEPNSGELSNILYRELWYACAGPLVTVPHVGERVYYFPQGHMEQLEASTHQSLD 1421
+S G+P G LS+ L RELW+ACAGPLVT+P GERVYYFP+GHMEQLEAS HQ L+
Sbjct: 3 ASNHSSGKPG-GVLSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLE 61
Query: 1422 QKMPSFNL 1445
Q+MPSFNL
Sbjct: 62 QQMPSFNL 69