BLASTX nr result

ID: Sinomenium22_contig00014767 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00014767
         (833 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34982.3| unnamed protein product [Vitis vinifera]               69   3e-09
ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron sp...    69   3e-09
emb|CAN81271.1| hypothetical protein VITISV_006146 [Vitis vinifera]    69   3e-09
ref|XP_003554853.1| PREDICTED: chloroplastic group IIA intron sp...    60   1e-06
gb|EXC45069.1| Chloroplastic group IIA intron splicing facilitat...    58   4e-06

>emb|CBI34982.3| unnamed protein product [Vitis vinifera]
          Length = 1028

 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 37/68 (54%), Positives = 49/68 (72%)
 Frame = +2

Query: 8    ISGNELMESSVKFDEDEFKSSVQRDEVRDGSDVKGVFRSVALSNRDRLLLRKQALKMKKR 187
            ++  E MESSVK  ++EFK  VQR      +++   FR+  LSNR+RLLLRKQAL+MKKR
Sbjct: 860  VNHEETMESSVKSSKNEFKPPVQRPVDTRSNEMP--FRAAPLSNRERLLLRKQALRMKKR 917

Query: 188  PILAVGNS 211
            P++AVG S
Sbjct: 918  PVIAVGRS 925


>ref|XP_002275511.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Vitis vinifera]
          Length = 1044

 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 37/68 (54%), Positives = 49/68 (72%)
 Frame = +2

Query: 8    ISGNELMESSVKFDEDEFKSSVQRDEVRDGSDVKGVFRSVALSNRDRLLLRKQALKMKKR 187
            ++  E MESSVK  ++EFK  VQR      +++   FR+  LSNR+RLLLRKQAL+MKKR
Sbjct: 860  VNHEETMESSVKSSKNEFKPPVQRPVDTRSNEMP--FRAAPLSNRERLLLRKQALRMKKR 917

Query: 188  PILAVGNS 211
            P++AVG S
Sbjct: 918  PVIAVGRS 925


>emb|CAN81271.1| hypothetical protein VITISV_006146 [Vitis vinifera]
          Length = 1399

 Score = 68.6 bits (166), Expect = 3e-09
 Identities = 37/68 (54%), Positives = 49/68 (72%)
 Frame = +2

Query: 8    ISGNELMESSVKFDEDEFKSSVQRDEVRDGSDVKGVFRSVALSNRDRLLLRKQALKMKKR 187
            ++  E MESSVK  ++EFK  VQR      +++   FR+  LSNR+RLLLRKQAL+MKKR
Sbjct: 1215 VNHEETMESSVKSSKNEFKPPVQRPVDTRSNEMP--FRAAPLSNRERLLLRKQALRMKKR 1272

Query: 188  PILAVGNS 211
            P++AVG S
Sbjct: 1273 PVIAVGRS 1280


>ref|XP_003554853.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 1027

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 37/68 (54%), Positives = 47/68 (69%)
 Frame = +2

Query: 8    ISGNELMESSVKFDEDEFKSSVQRDEVRDGSDVKGVFRSVALSNRDRLLLRKQALKMKKR 187
            +S +++MESS+   E +   S     VRD S  +   RSV LSNR+RLLLRKQALKMKKR
Sbjct: 861  VSISKVMESSIVASESDPDLSAL---VRDMSSNELPSRSVYLSNRERLLLRKQALKMKKR 917

Query: 188  PILAVGNS 211
            P+L+VG S
Sbjct: 918  PVLSVGKS 925


>gb|EXC45069.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
           notabilis]
          Length = 966

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 34/68 (50%), Positives = 46/68 (67%)
 Frame = +2

Query: 8   ISGNELMESSVKFDEDEFKSSVQRDEVRDGSDVKGVFRSVALSNRDRLLLRKQALKMKKR 187
           +S  E +ESS K D++  + SV    + D    +   R++ LSNR+RLLLRKQALKMKKR
Sbjct: 787 VSDEEEVESSAKSDKNGLEPSVP--VIADKGLNEMPSRTIILSNRERLLLRKQALKMKKR 844

Query: 188 PILAVGNS 211
           P+LAVG +
Sbjct: 845 PVLAVGRN 852


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