BLASTX nr result

ID: Sinomenium22_contig00014536 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00014536
         (388 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEJ72569.1| putative reverse transcriptase family member [Mal...    63   5e-08
gb|ABN08144.1| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DN...    61   2e-07
emb|CCH50976.1| T4.15 [Malus x robusta]                                58   1e-06
gb|ABN09815.1| hypothetical protein MtrDRAFT_AC167711g37v2 [Medi...    58   2e-06
gb|ABN08556.1| Polyprotein, putative [Medicago truncatula]             57   3e-06
emb|CAN70693.1| hypothetical protein VITISV_041975 [Vitis vinifera]    56   5e-06
emb|CAN60536.1| hypothetical protein VITISV_010581 [Vitis vinifera]    56   6e-06

>gb|AEJ72569.1| putative reverse transcriptase family member [Malus domestica]
          Length = 212

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 29/55 (52%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
 Frame = -1

Query: 388 KVGWVKWRSASGILYDRCIQLKLKENFFKTPNRLAILYRT*FWAIK-KHVNNTSV 227
           + GW+KW+SASG+L DRC+ LKLK  F++T  R A+LY T  WA+K +HV+   V
Sbjct: 45  QAGWMKWKSASGVLCDRCMPLKLKGKFYRTTIRPAMLYGTECWAVKYQHVHKMGV 99


>gb|ABN08144.1| RNA-directed DNA polymerase ; HMG-I and HMG-Y, DNA-binding,
           putative [Medicago truncatula]
          Length = 195

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
 Frame = -1

Query: 388 KVGWVKWRSASGILYDRCIQLKLKENFFKTPNRLAILYRT*FWAIK-KHVNNTSVT 224
           + GW+KWR ASG+L D+ + LKLK  F++T  R A+LY T  WA+K +H N  SVT
Sbjct: 103 QAGWLKWRRASGVLCDKKVPLKLKGKFYRTAIRPALLYGTECWAVKSQHENQVSVT 158


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 28/55 (50%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
 Frame = -1

Query: 388 KVGWVKWRSASGILYDRCIQLKLKENFFKTPNRLAILYRT*FWAIK-KHVNNTSV 227
           + GW+KW+SASG+L DR + LKLK  F++T  R A+LY T  WA+K +HV+   V
Sbjct: 819 QAGWMKWKSASGVLCDRRMPLKLKGKFYRTAIRPAMLYGTECWAVKHQHVHKMGV 873


>gb|ABN09815.1| hypothetical protein MtrDRAFT_AC167711g37v2 [Medicago truncatula]
          Length = 104

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
 Frame = -1

Query: 388 KVGWVKWRSASGILYDRCIQLKLKENFFKTPNRLAILYRT*FWAIK-KHVNNTSV 227
           +VGW+KWR AS +L D+ + LKLK  F++T  R A+LY T  WA+K +H N  SV
Sbjct: 12  QVGWLKWRRASSVLCDKKVPLKLKGKFYRTTVRPALLYGTECWAVKSQHENQISV 66


>gb|ABN08556.1| Polyprotein, putative [Medicago truncatula]
          Length = 137

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
 Frame = -1

Query: 388 KVGWVKWRSASGILYDRCIQLKLKENFFKTPNRLAILYRT*FWAIK-KHVNNTSV 227
           + GW+ WR ASG+L D+ + LKLK  F++T  R A+LY T  WA+K +H N  SV
Sbjct: 31  QAGWLNWRRASGVLCDKKVPLKLKGKFYRTAVRPALLYGTECWAVKSQHENQVSV 85


>emb|CAN70693.1| hypothetical protein VITISV_041975 [Vitis vinifera]
          Length = 1795

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 30/67 (44%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
 Frame = -2

Query: 222 PNSIEELF--SFSPRSNLDRRGKEIDKVIRLLSIWCVWLERNNRMFEDNMKDGSQVWDSI 49
           P SIE++   SF    NL R GK + ++  L  IW VW ERNNR+FED  +    VWD I
Sbjct: 227 PRSIEDMLVISFKGLGNLVR-GKILWQIACLTLIWMVWQERNNRIFEDKGRTEEVVWDLI 285

Query: 48  KYLAALW 28
           ++ ++LW
Sbjct: 286 RFYSSLW 292


>emb|CAN60536.1| hypothetical protein VITISV_010581 [Vitis vinifera]
          Length = 1273

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
 Frame = -2

Query: 222  PNSIEELFSFSPRS-NLDRRGKEIDKVIRLLSIWCVWLERNNRMFEDNMKDGSQVWDSIK 46
            P SI ++ S + +     +RG  + +   +  IW VW ERN RMFED  ++   +WDSI 
Sbjct: 1179 PRSISDMMSINYKGFGNSKRGMVLWQNACIALIWLVWRERNVRMFEDKARNSENLWDSIH 1238

Query: 45   YLAALWVFNSPLSNG 1
            +LA LW   S +  G
Sbjct: 1239 FLAPLWALCSAVFKG 1253


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