BLASTX nr result
ID: Sinomenium22_contig00013580
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00013580
(340 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EYU19190.1| hypothetical protein MIMGU_mgv1a015840mg [Mimulus... 100 3e-19
ref|XP_004244174.1| PREDICTED: nucleolin-like isoform 1 [Solanum... 99 6e-19
ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein ... 98 1e-18
ref|XP_007212216.1| hypothetical protein PRUPE_ppa013115mg [Prun... 97 2e-18
ref|XP_004294323.1| PREDICTED: nucleolin-like [Fragaria vesca su... 96 5e-18
gb|AFK43918.1| unknown [Lotus japonicus] 96 7e-18
ref|XP_006360109.1| PREDICTED: glycine-rich RNA-binding protein ... 95 9e-18
ref|XP_007021155.1| RNA-binding family protein [Theobroma cacao]... 94 2e-17
gb|EYU33582.1| hypothetical protein MIMGU_mgv1a015850mg [Mimulus... 94 3e-17
gb|AFK44512.1| unknown [Medicago truncatula] 93 3e-17
ref|XP_006659102.1| PREDICTED: glycine-rich RNA-binding protein ... 92 6e-17
gb|EPS66753.1| hypothetical protein M569_08025, partial [Genlise... 92 6e-17
ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [S... 92 6e-17
ref|XP_002316957.1| RNA-binding family protein [Populus trichoca... 92 6e-17
ref|NP_200269.1| RNA recognition motif-containing protein [Arabi... 92 7e-17
ref|XP_004972888.1| PREDICTED: nucleolin-like [Setaria italica] 92 7e-17
ref|XP_002864345.1| RNA recognition motif-containing protein [Ar... 92 7e-17
ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sa... 91 1e-16
dbj|BAG92098.1| unnamed protein product [Oryza sativa Japonica G... 91 2e-16
ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group] g... 91 2e-16
>gb|EYU19190.1| hypothetical protein MIMGU_mgv1a015840mg [Mimulus guttatus]
Length = 143
Score = 100 bits (248), Expect = 3e-19
Identities = 58/101 (57%), Positives = 66/101 (65%), Gaps = 9/101 (8%)
Frame = +1
Query: 64 MAIRTAATRGIG--------RRLFSTF-NFXXXXXXXXXXXXXXXXXSTNLFVSGLNKRT 216
MA+RTAATR R L+S+F NF STNLFVSGL+KRT
Sbjct: 1 MAMRTAATRAAATATSQSGLRALYSSFSNFPFNQPQAKVEKPPPAEPSTNLFVSGLSKRT 60
Query: 217 TTEGIREAFAKFGQVVHARVVTDPAHGYSKGFGFVRYATLE 339
TTEG+R+AFAKFG VV ARVVTD A GYSKGFGFVRY T++
Sbjct: 61 TTEGLRDAFAKFGAVVDARVVTDRASGYSKGFGFVRYPTID 101
>ref|XP_004244174.1| PREDICTED: nucleolin-like isoform 1 [Solanum lycopersicum]
Length = 151
Score = 99.0 bits (245), Expect = 6e-19
Identities = 59/99 (59%), Positives = 66/99 (66%), Gaps = 7/99 (7%)
Frame = +1
Query: 64 MAIRTA-----ATRGIGRRLFSTFN--FXXXXXXXXXXXXXXXXXSTNLFVSGLNKRTTT 222
MA+R A ATRG+ R L STF+ F STNLFVSGL+KRTT+
Sbjct: 1 MALRAAKAAAPATRGL-RALLSTFSPSFPFNTPSKQVEKPPPAEPSTNLFVSGLSKRTTS 59
Query: 223 EGIREAFAKFGQVVHARVVTDPAHGYSKGFGFVRYATLE 339
EG+REAF K G+VVHARVVTD GYSKGFGFVRYATLE
Sbjct: 60 EGLREAFVKHGEVVHARVVTDRVSGYSKGFGFVRYATLE 98
>ref|XP_002283144.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
gi|147854770|emb|CAN78606.1| hypothetical protein
VITISV_024164 [Vitis vinifera]
gi|302143178|emb|CBI20473.3| unnamed protein product
[Vitis vinifera]
Length = 135
Score = 98.2 bits (243), Expect = 1e-18
Identities = 55/93 (59%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Frame = +1
Query: 64 MAIRTAATRGIG-RRLFSTFNFXXXXXXXXXXXXXXXXXSTNLFVSGLNKRTTTEGIREA 240
MA+R AA RRLFST F STNLFVSGL+KRTT+EG+ EA
Sbjct: 1 MAMRAAAAAPRSLRRLFSTSTFIPPPITAATPATPPAEPSTNLFVSGLSKRTTSEGLHEA 60
Query: 241 FAKFGQVVHARVVTDPAHGYSKGFGFVRYATLE 339
F+KFGQVV+ARVVTD GYSKGFGFVRY +LE
Sbjct: 61 FSKFGQVVNARVVTDRVSGYSKGFGFVRYVSLE 93
>ref|XP_007212216.1| hypothetical protein PRUPE_ppa013115mg [Prunus persica]
gi|462408081|gb|EMJ13415.1| hypothetical protein
PRUPE_ppa013115mg [Prunus persica]
Length = 139
Score = 97.1 bits (240), Expect = 2e-18
Identities = 56/97 (57%), Positives = 68/97 (70%), Gaps = 3/97 (3%)
Frame = +1
Query: 58 IGMAIRTAA---TRGIGRRLFSTFNFXXXXXXXXXXXXXXXXXSTNLFVSGLNKRTTTEG 228
+ + +R AA TRG+ RRLFST +F STNLFVSGL+KRTT+E
Sbjct: 1 MALTLRAAAAGPTRGL-RRLFST-SFIPPMNSPAPQAREKAEPSTNLFVSGLSKRTTSEK 58
Query: 229 IREAFAKFGQVVHARVVTDPAHGYSKGFGFVRYATLE 339
++EAF++FG+VVHARVVTD GYSKGFGFVRYATLE
Sbjct: 59 LQEAFSQFGEVVHARVVTDRVSGYSKGFGFVRYATLE 95
>ref|XP_004294323.1| PREDICTED: nucleolin-like [Fragaria vesca subsp. vesca]
Length = 141
Score = 95.9 bits (237), Expect = 5e-18
Identities = 55/95 (57%), Positives = 62/95 (65%)
Frame = +1
Query: 55 RIGMAIRTAATRGIGRRLFSTFNFXXXXXXXXXXXXXXXXXSTNLFVSGLNKRTTTEGIR 234
R A TRG+ RRLFST +F STNLFVSGLNKRTT+EG+
Sbjct: 6 RAAAAAAAGPTRGL-RRLFST-SFVPPMNSPVPNPRQEAEPSTNLFVSGLNKRTTSEGLH 63
Query: 235 EAFAKFGQVVHARVVTDPAHGYSKGFGFVRYATLE 339
+AFA FG+VV ARVVTD G+SKGFGFVRYATLE
Sbjct: 64 KAFAAFGEVVQARVVTDRVSGFSKGFGFVRYATLE 98
>gb|AFK43918.1| unknown [Lotus japonicus]
Length = 141
Score = 95.5 bits (236), Expect = 7e-18
Identities = 56/97 (57%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Frame = +1
Query: 58 IGMAIRTAATRGIGRRLF---STFNFXXXXXXXXXXXXXXXXXSTNLFVSGLNKRTTTEG 228
+ M AA RG+ RRLF ST STNLFVSGLNKRTTTE
Sbjct: 1 MAMRAAVAAPRGL-RRLFCTNSTSPSSPFTLTGPPTTRQMGEPSTNLFVSGLNKRTTTEK 59
Query: 229 IREAFAKFGQVVHARVVTDPAHGYSKGFGFVRYATLE 339
+RE FAKFG+VVHARVVTD GYSKGFGFV+YAT+E
Sbjct: 60 LREEFAKFGEVVHARVVTDRVSGYSKGFGFVKYATIE 96
>ref|XP_006360109.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
[Solanum tuberosum]
Length = 157
Score = 95.1 bits (235), Expect = 9e-18
Identities = 54/88 (61%), Positives = 60/88 (68%), Gaps = 2/88 (2%)
Frame = +1
Query: 82 ATRGIGRRLFSTFN--FXXXXXXXXXXXXXXXXXSTNLFVSGLNKRTTTEGIREAFAKFG 255
A RG+ R L STF+ F STNLFVSGL+KRTT+EG+REAF K G
Sbjct: 18 APRGL-RALLSTFSSSFPFNTPSKQVEKPPPAEPSTNLFVSGLSKRTTSEGLREAFVKHG 76
Query: 256 QVVHARVVTDPAHGYSKGFGFVRYATLE 339
+VVHARVVTD GYSKGFGFVRYATLE
Sbjct: 77 EVVHARVVTDRVSGYSKGFGFVRYATLE 104
>ref|XP_007021155.1| RNA-binding family protein [Theobroma cacao]
gi|508720783|gb|EOY12680.1| RNA-binding family protein
[Theobroma cacao]
Length = 156
Score = 94.0 bits (232), Expect = 2e-17
Identities = 58/108 (53%), Positives = 64/108 (59%), Gaps = 16/108 (14%)
Frame = +1
Query: 64 MAIRTAATRGIG--------RRLFSTFN--------FXXXXXXXXXXXXXXXXXSTNLFV 195
MA+R AAT G+ RRLFST + STNLFV
Sbjct: 1 MALRAAATTGMAARMAPLGMRRLFSTTSPNSFMPPPITAMGNGEGTPGREQAPPSTNLFV 60
Query: 196 SGLNKRTTTEGIREAFAKFGQVVHARVVTDPAHGYSKGFGFVRYATLE 339
SGLNKRTT E +REAF++FGQVV ARVVTD GYSKGFGFVRYATLE
Sbjct: 61 SGLNKRTTMEKLREAFSQFGQVVDARVVTDRVSGYSKGFGFVRYATLE 108
>gb|EYU33582.1| hypothetical protein MIMGU_mgv1a015850mg [Mimulus guttatus]
gi|604327915|gb|EYU33583.1| hypothetical protein
MIMGU_mgv1a015850mg [Mimulus guttatus]
Length = 143
Score = 93.6 bits (231), Expect = 3e-17
Identities = 43/54 (79%), Positives = 51/54 (94%)
Frame = +1
Query: 178 STNLFVSGLNKRTTTEGIREAFAKFGQVVHARVVTDPAHGYSKGFGFVRYATLE 339
STNLFVSGL+KRTTTEG+R+AFAKFG+V+HARV+TD GYSKG+GFVRYATL+
Sbjct: 48 STNLFVSGLSKRTTTEGLRDAFAKFGEVLHARVMTDRVSGYSKGYGFVRYATLQ 101
>gb|AFK44512.1| unknown [Medicago truncatula]
Length = 144
Score = 93.2 bits (230), Expect = 3e-17
Identities = 45/54 (83%), Positives = 49/54 (90%)
Frame = +1
Query: 178 STNLFVSGLNKRTTTEGIREAFAKFGQVVHARVVTDPAHGYSKGFGFVRYATLE 339
STNLFVSGL+KRTTTE +REAF KFG+VVHARVVTD GYSKGFGFV+YATLE
Sbjct: 50 STNLFVSGLSKRTTTETLREAFQKFGEVVHARVVTDRVSGYSKGFGFVKYATLE 103
>ref|XP_006659102.1| PREDICTED: glycine-rich RNA-binding protein 3, mitochondrial-like
[Oryza brachyantha]
Length = 141
Score = 92.4 bits (228), Expect = 6e-17
Identities = 53/92 (57%), Positives = 61/92 (66%)
Frame = +1
Query: 64 MAIRTAATRGIGRRLFSTFNFXXXXXXXXXXXXXXXXXSTNLFVSGLNKRTTTEGIREAF 243
MA AA G RR+FS F S NLFVSGL+KRTTT+G+REAF
Sbjct: 1 MAAAAAARSGF-RRMFSISAFSPPKPPTPPPKADP---SPNLFVSGLSKRTTTDGLREAF 56
Query: 244 AKFGQVVHARVVTDPAHGYSKGFGFVRYATLE 339
AKFG+V+HARVVTD G+SKGFGFVRYAT+E
Sbjct: 57 AKFGEVLHARVVTDRVTGFSKGFGFVRYATVE 88
>gb|EPS66753.1| hypothetical protein M569_08025, partial [Genlisea aurea]
Length = 151
Score = 92.4 bits (228), Expect = 6e-17
Identities = 44/54 (81%), Positives = 51/54 (94%)
Frame = +1
Query: 178 STNLFVSGLNKRTTTEGIREAFAKFGQVVHARVVTDPAHGYSKGFGFVRYATLE 339
STNLFVSGL+KRTTTEG+R+AFAKFG+VV+ARVVTD G+SKGFGFV+YATLE
Sbjct: 52 STNLFVSGLSKRTTTEGLRDAFAKFGEVVNARVVTDRVSGHSKGFGFVKYATLE 105
>ref|XP_002445020.1| hypothetical protein SORBIDRAFT_07g002960 [Sorghum bicolor]
gi|241941370|gb|EES14515.1| hypothetical protein
SORBIDRAFT_07g002960 [Sorghum bicolor]
Length = 140
Score = 92.4 bits (228), Expect = 6e-17
Identities = 44/54 (81%), Positives = 49/54 (90%)
Frame = +1
Query: 178 STNLFVSGLNKRTTTEGIREAFAKFGQVVHARVVTDPAHGYSKGFGFVRYATLE 339
S NLFVSGL+KRTTTEG+R+AFAKFG+VVHARVVTD G+SKGFGFVRYAT E
Sbjct: 34 SPNLFVSGLSKRTTTEGLRDAFAKFGEVVHARVVTDRVSGFSKGFGFVRYATTE 87
>ref|XP_002316957.1| RNA-binding family protein [Populus trichocarpa]
gi|222860022|gb|EEE97569.1| RNA-binding family protein
[Populus trichocarpa]
Length = 153
Score = 92.4 bits (228), Expect = 6e-17
Identities = 53/96 (55%), Positives = 62/96 (64%), Gaps = 5/96 (5%)
Frame = +1
Query: 67 AIRTAATRGIGRRLFSTFN-----FXXXXXXXXXXXXXXXXXSTNLFVSGLNKRTTTEGI 231
A AA RG RLFST + F +TNLFVSGL+KRTT+EG+
Sbjct: 12 AAAAAAPRGGFLRLFSTTSTSSSSFPFPQTTQQTPAREQAEPNTNLFVSGLSKRTTSEGL 71
Query: 232 REAFAKFGQVVHARVVTDPAHGYSKGFGFVRYATLE 339
+EAF+KFG+VV ARVVTD GYSKGFGFV+YATLE
Sbjct: 72 QEAFSKFGEVVQARVVTDRVSGYSKGFGFVKYATLE 107
>ref|NP_200269.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|9758950|dbj|BAB09337.1| unnamed protein product
[Arabidopsis thaliana] gi|18175762|gb|AAL59923.1|
unknown protein [Arabidopsis thaliana]
gi|20465513|gb|AAM20239.1| unknown protein [Arabidopsis
thaliana] gi|21553374|gb|AAM62467.1| unknown
[Arabidopsis thaliana] gi|332009129|gb|AED96512.1| RNA
recognition motif-containing protein [Arabidopsis
thaliana]
Length = 156
Score = 92.0 bits (227), Expect = 7e-17
Identities = 53/99 (53%), Positives = 63/99 (63%), Gaps = 5/99 (5%)
Frame = +1
Query: 58 IGMAIRTAATRGIG-RRLF----STFNFXXXXXXXXXXXXXXXXXSTNLFVSGLNKRTTT 222
I A+ A+ +G RRLF S F+F STNLFVSGL+KRTT+
Sbjct: 10 ISRAVTEVASAPVGLRRLFCSNASRFSFLSPQAESQTPARPQAEPSTNLFVSGLSKRTTS 69
Query: 223 EGIREAFAKFGQVVHARVVTDPAHGYSKGFGFVRYATLE 339
EG+R AFA+FG+V A+VVTD GYSKGFGFVRYATLE
Sbjct: 70 EGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLE 108
>ref|XP_004972888.1| PREDICTED: nucleolin-like [Setaria italica]
Length = 140
Score = 92.0 bits (227), Expect = 7e-17
Identities = 44/54 (81%), Positives = 49/54 (90%)
Frame = +1
Query: 178 STNLFVSGLNKRTTTEGIREAFAKFGQVVHARVVTDPAHGYSKGFGFVRYATLE 339
S NLFVSGL+KRTTTEG+REAFA FG+VVHARVVTD G+SKGFGFVRYAT+E
Sbjct: 34 SPNLFVSGLSKRTTTEGLREAFAAFGEVVHARVVTDRVSGFSKGFGFVRYATVE 87
>ref|XP_002864345.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata] gi|297310180|gb|EFH40604.1| RNA recognition
motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 156
Score = 92.0 bits (227), Expect = 7e-17
Identities = 53/99 (53%), Positives = 63/99 (63%), Gaps = 5/99 (5%)
Frame = +1
Query: 58 IGMAIRTAATRGIG-RRLF----STFNFXXXXXXXXXXXXXXXXXSTNLFVSGLNKRTTT 222
I A+ A+ +G RRLF S F+F STNLFVSGL+KRTT+
Sbjct: 10 ISRAVTEVASAPVGLRRLFCSNASRFSFLSPQAESQTPARPQAEPSTNLFVSGLSKRTTS 69
Query: 223 EGIREAFAKFGQVVHARVVTDPAHGYSKGFGFVRYATLE 339
EG+R AFA+FG+V A+VVTD GYSKGFGFVRYATLE
Sbjct: 70 EGLRTAFAQFGEVADAKVVTDRVSGYSKGFGFVRYATLE 108
>ref|XP_004151968.1| PREDICTED: nucleolysin TIAR-like [Cucumis sativus]
gi|449496932|ref|XP_004160266.1| PREDICTED: nucleolysin
TIAR-like [Cucumis sativus]
Length = 174
Score = 91.3 bits (225), Expect = 1e-16
Identities = 44/54 (81%), Positives = 48/54 (88%)
Frame = +1
Query: 178 STNLFVSGLNKRTTTEGIREAFAKFGQVVHARVVTDPAHGYSKGFGFVRYATLE 339
STNLFVSGL+KRTTTE + EAFAKFG+V HARVVTD GYSKGFGFV+YATLE
Sbjct: 78 STNLFVSGLSKRTTTEKLHEAFAKFGEVAHARVVTDRVTGYSKGFGFVKYATLE 131
>dbj|BAG92098.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 111
Score = 90.9 bits (224), Expect = 2e-16
Identities = 41/54 (75%), Positives = 50/54 (92%)
Frame = +1
Query: 178 STNLFVSGLNKRTTTEGIREAFAKFGQVVHARVVTDPAHGYSKGFGFVRYATLE 339
S NLF+SGL+KRTTT+G++EAFAKFG+V+HARVVTD G+SKGFGFVRYAT+E
Sbjct: 35 SPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVE 88
>ref|NP_001060964.1| Os08g0139000 [Oryza sativa Japonica Group]
gi|38636774|dbj|BAD03017.1| putative RNA recognition
motif (RRM)-containing protein [Oryza sativa Japonica
Group] gi|113622933|dbj|BAF22878.1| Os08g0139000 [Oryza
sativa Japonica Group] gi|215767574|dbj|BAG99802.1|
unnamed protein product [Oryza sativa Japonica Group]
gi|222639884|gb|EEE68016.1| hypothetical protein
OsJ_25986 [Oryza sativa Japonica Group]
Length = 141
Score = 90.9 bits (224), Expect = 2e-16
Identities = 41/54 (75%), Positives = 50/54 (92%)
Frame = +1
Query: 178 STNLFVSGLNKRTTTEGIREAFAKFGQVVHARVVTDPAHGYSKGFGFVRYATLE 339
S NLF+SGL+KRTTT+G++EAFAKFG+V+HARVVTD G+SKGFGFVRYAT+E
Sbjct: 35 SPNLFISGLSKRTTTDGLKEAFAKFGEVIHARVVTDRVTGFSKGFGFVRYATVE 88