BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00013390
         (1618 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXB42558.1| DNA repair protein recA-1-like protein [Morus not...   451   e-166
ref|XP_007215528.1| hypothetical protein PRUPE_ppa007080mg [Prun...   453   e-163
ref|XP_006477998.1| PREDICTED: DNA repair protein recA homolog 1...   446   e-161
ref|XP_006370468.1| DNA repair protein recA [Populus trichocarpa...   449   e-161
ref|XP_004982347.1| PREDICTED: DNA repair protein recA homolog 1...   449   e-161
ref|XP_006441022.1| hypothetical protein CICLE_v10020181mg [Citr...   444   e-160
ref|XP_004288592.1| PREDICTED: DNA repair protein recA homolog 1...   448   e-160
ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1...   445   e-160
ref|XP_007022303.1| RecA DNA recombination family protein isofor...   446   e-160
ref|XP_006836393.1| hypothetical protein AMTR_s00092p00136000 [A...   452   e-160
emb|CBI21810.3| unnamed protein product [Vitis vinifera]              443   e-160
ref|XP_007133319.1| hypothetical protein PHAVU_011G169700g [Phas...   453   e-159
ref|XP_002466766.1| hypothetical protein SORBIDRAFT_01g013810 [S...   445   e-159
ref|XP_004243994.1| PREDICTED: DNA repair protein recA homolog 1...   456   e-158
ref|XP_003546633.1| PREDICTED: DNA repair protein recA homolog 1...   450   e-158
ref|XP_006346054.1| PREDICTED: DNA repair protein recA homolog 1...   455   e-158
ref|XP_006651624.1| PREDICTED: DNA repair protein recA homolog 1...   444   e-158
ref|NP_001148809.1| protein recA [Zea mays] gi|195622282|gb|ACG3...   445   e-158
ref|XP_003562018.1| PREDICTED: DNA repair protein recA homolog 1...   447   e-158
ref|NP_001050738.1| Os03g0639700 [Oryza sativa Japonica Group] g...   445   e-157

>gb|EXB42558.1| DNA repair protein recA-1-like protein [Morus notabilis]
          Length = 438

 Score =  451 bits (1160), Expect(2) = e-166
 Identities = 241/293 (82%), Positives = 255/293 (87%), Gaps = 12/293 (4%)
 Frame = +1

Query: 79  YFHSKTHPT-FLFSSLQIPLSRLRFSNRFDWKCT-------RARSEF----NGSLSGDTD 222
           +F S T  T FL  SL +P S    ++    +         R R EF    NG+L G+ D
Sbjct: 13  HFRSSTSTTRFLPPSLYLPSSSSSSASSLRRRSVSSPSAIRRIRCEFDAKINGALPGEFD 72

Query: 223 QRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRGRI 402
            R +DRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRGRI
Sbjct: 73  PRFLDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRGRI 132

Query: 403 VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDN 582
           VEI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+ENLIVCQPD+
Sbjct: 133 VEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDH 192

Query: 583 GEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQAMRKMSGN 762
           GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQA+RKMSGN
Sbjct: 193 GEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGN 252

Query: 763 ASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSV 921
           ASKA CTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLEIRSTGKIKSV
Sbjct: 253 ASKACCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSV 305



 Score =  161 bits (408), Expect(2) = e-166
 Identities = 79/105 (75%), Positives = 93/105 (88%), Gaps = 2/105 (1%)
 Frame = +2

Query: 959  VSRPYKQAEFDIIFGDGVNKLGCILDCAEVMDIIVKKGSWYSYEDHRLGQGRDKALQYLR 1138
            VSRPYKQAEF+IIFG+GV+KLGC+LDCAE+MD+I KKGSWYSY DHRLGQGRD++LQYLR
Sbjct: 333  VSRPYKQAEFEIIFGEGVSKLGCVLDCAEIMDVIAKKGSWYSYGDHRLGQGRDRSLQYLR 392

Query: 1139 ENPLLCSDIEKVVRSKMADGTIQTGVLQ-RQLSLVQ-DEQVIDET 1267
            ENPLL  +IEK+VRSK+A+GT QTG LQ R LSL Q DE V +E+
Sbjct: 393  ENPLLLDEIEKIVRSKLAEGTGQTGFLQPRSLSLPQEDEDVYEES 437


>ref|XP_007215528.1| hypothetical protein PRUPE_ppa007080mg [Prunus persica]
           gi|462411678|gb|EMJ16727.1| hypothetical protein
           PRUPE_ppa007080mg [Prunus persica]
          Length = 383

 Score =  453 bits (1166), Expect(2) = e-163
 Identities = 229/246 (93%), Positives = 241/246 (97%)
 Frame = +1

Query: 184 RSEFNGSLSGDTDQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTL 363
           +++ NG+LS D+D R IDRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTL
Sbjct: 14  QAKVNGALSADSDPRFIDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTL 73

Query: 364 DLALGGGLPRGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALG 543
           DLALGGGLP+GRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALG
Sbjct: 74  DLALGGGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALG 133

Query: 544 VDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQA 723
           VD+ENLIVCQPD+GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQA
Sbjct: 134 VDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQA 193

Query: 724 RLMSQAMRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRST 903
           RLMSQA+RKMSGNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLEIRST
Sbjct: 194 RLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRST 253

Query: 904 GKIKSV 921
           GKIKSV
Sbjct: 254 GKIKSV 259



 Score =  150 bits (379), Expect(2) = e-163
 Identities = 69/87 (79%), Positives = 77/87 (88%)
 Frame = +2

Query: 959  VSRPYKQAEFDIIFGDGVNKLGCILDCAEVMDIIVKKGSWYSYEDHRLGQGRDKALQYLR 1138
            VSRPYKQAEF+I+FG+GV KLGCILDCAE MD++VKKGSWYSY DHRLGQGRDKALQYLR
Sbjct: 278  VSRPYKQAEFEIVFGEGVGKLGCILDCAETMDVVVKKGSWYSYGDHRLGQGRDKALQYLR 337

Query: 1139 ENPLLCSDIEKVVRSKMADGTIQTGVL 1219
            ENPLL  +IEK+VRS + DGT Q G L
Sbjct: 338  ENPLLLDEIEKIVRSMITDGTGQVGTL 364


>ref|XP_006477998.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
           [Citrus sinensis]
          Length = 440

 Score =  446 bits (1148), Expect(2) = e-161
 Identities = 239/294 (81%), Positives = 255/294 (86%), Gaps = 14/294 (4%)
 Frame = +1

Query: 82  FHSKTHPTFLF---SSLQIPLSRLRFSNRFDWKCTRARS-------EFNGSLSGDT---- 219
           F+ KTH   L    S L    SR RF      K + AR        EF+G ++G +    
Sbjct: 26  FNMKTHSCLLSISSSPLHCQSSRSRFFTASS-KLSAARKRDKKISCEFDGKVNGFSSDSG 84

Query: 220 DQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRGR 399
           D R +DRQ+AL+AAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLP+GR
Sbjct: 85  DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGR 144

Query: 400 IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPD 579
           IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+ENLIVCQPD
Sbjct: 145 IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPD 204

Query: 580 NGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQAMRKMSG 759
           NGEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQA+RKMSG
Sbjct: 205 NGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSG 264

Query: 760 NASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSV 921
           NASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLEIRSTGKIKSV
Sbjct: 265 NASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSV 318



 Score =  152 bits (384), Expect(2) = e-161
 Identities = 72/103 (69%), Positives = 89/103 (86%), Gaps = 1/103 (0%)
 Frame = +2

Query: 959  VSRPYKQAEFDIIFGDGVNKLGCILDCAEVMDIIVKKGSWYSYEDHRLGQGRDKALQYLR 1138
            VSRPYKQAEF+IIFG+GV+KLGC+LDCAE+MDI+V+KG+WYSY D RLGQGRDKALQYLR
Sbjct: 337  VSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLR 396

Query: 1139 ENPLLCSDIEKVVRSKMADGTIQTGVLQRQLSLV-QDEQVIDE 1264
            +NPLL  +IEKVVRS M+DG++  G   R +SL  QDE +++E
Sbjct: 397  DNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQDENILEE 439


>ref|XP_006370468.1| DNA repair protein recA [Populus trichocarpa]
           gi|550349661|gb|ERP67037.1| DNA repair protein recA
           [Populus trichocarpa]
          Length = 427

 Score =  449 bits (1155), Expect(2) = e-161
 Identities = 238/292 (81%), Positives = 252/292 (86%), Gaps = 9/292 (3%)
 Frame = +1

Query: 73  VHYFHSKTHPTFLFSSLQIPLSRLRFSNRF----DWKCTRARSEF----NGS-LSGDTDQ 225
           +H+F SK+ P      L    SR+ F          K    R EF    NGS LS D D 
Sbjct: 13  IHHFPSKSTPFHPSLPLYFQFSRVCFKTSHFAAVKKKPKEIRCEFDSKVNGSPLSSDLDA 72

Query: 226 RLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRGRIV 405
           R +D+QKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLP+GRIV
Sbjct: 73  RFLDKQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPKGRIV 132

Query: 406 EIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDNG 585
           EIFGPESSGKTTLALHAIAEVQK GG+AMLVDAEHAFDPAYS+ALGVD+ENLIVCQPDNG
Sbjct: 133 EIFGPESSGKTTLALHAIAEVQKFGGHAMLVDAEHAFDPAYSKALGVDVENLIVCQPDNG 192

Query: 586 EMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQAMRKMSGNA 765
           EMALE ADRMCRSGA+DLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQA+RKMSGNA
Sbjct: 193 EMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSGNA 252

Query: 766 SKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSV 921
           SKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLEIRSTGKIKSV
Sbjct: 253 SKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSV 304



 Score =  149 bits (375), Expect(2) = e-161
 Identities = 73/104 (70%), Positives = 87/104 (83%), Gaps = 2/104 (1%)
 Frame = +2

Query: 959  VSRPYKQAEFDIIFGDGVNKLGCILDCAEVMDIIVKKGSWYSYEDHRLGQGRDKALQYLR 1138
            VSRPYKQAEF+IIFG+GV++LGCILDCAE+MD++VKKGSWYSY DHRLGQGRDKALQYLR
Sbjct: 323  VSRPYKQAEFEIIFGEGVSQLGCILDCAEMMDVVVKKGSWYSYGDHRLGQGRDKALQYLR 382

Query: 1139 ENPLLCSDIEKVVRSKMADGTIQTGVLQ-RQLSL-VQDEQVIDE 1264
            +NP L  +IEK VRS M DGT+  G  Q R + + +QDE V D+
Sbjct: 383  DNPHLQEEIEKKVRSTMTDGTVNMGTPQARNMPVPLQDENVYDD 426


>ref|XP_004982347.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
           [Setaria italica]
          Length = 417

 Score =  449 bits (1155), Expect(2) = e-161
 Identities = 226/255 (88%), Positives = 241/255 (94%), Gaps = 5/255 (1%)
 Frame = +1

Query: 169 KCTRARSEF-----NGSLSGDTDQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALV 333
           +  R R EF     NG+LSG+ D RL+DRQKAL+AAM+DINNSFGKGSVTRLGSAGGA V
Sbjct: 40  RARRLRCEFVAGGGNGALSGEDDPRLVDRQKALDAAMSDINNSFGKGSVTRLGSAGGAFV 99

Query: 334 ETFPSGCLTLDLALGGGLPRGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHA 513
           ETFPSGCLTLD ALGGGLP+GR+VE++GPESSGKTTLALHAIAE+QKLGGNAMLVDAEHA
Sbjct: 100 ETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEIQKLGGNAMLVDAEHA 159

Query: 514 FDPAYSRALGVDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGE 693
           FDPAYS+ALGVDIENLIVCQPDNGEMALE ADRMCRSGAIDLIC+DSVSALTPRAEIEGE
Sbjct: 160 FDPAYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGE 219

Query: 694 IGMQQMGLQARLMSQAMRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFF 873
           IGMQQMGLQARLMSQA+RKMSGNASKAGCTL+FLNQIRYKIGVFYGNPEVTSGGIALKFF
Sbjct: 220 IGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFF 279

Query: 874 ASVRLEIRSTGKIKS 918
           ASVRLEIRSTGKIKS
Sbjct: 280 ASVRLEIRSTGKIKS 294



 Score =  148 bits (373), Expect(2) = e-161
 Identities = 69/103 (66%), Positives = 87/103 (84%), Gaps = 1/103 (0%)
 Frame = +2

Query: 959  VSRPYKQAEFDIIFGDGVNKLGCILDCAEVMDIIVKKGSWYSYEDHRLGQGRDKALQYLR 1138
            VSRPYKQAEF+IIFG+GV+KLGC+LDCAE+M+++ KKGSWYSY+D RLGQGR+KALQYLR
Sbjct: 314  VSRPYKQAEFEIIFGEGVSKLGCVLDCAELMEVVAKKGSWYSYKDMRLGQGREKALQYLR 373

Query: 1139 ENPLLCSDIEKVVRSKMADGTIQTGVLQ-RQLSLVQDEQVIDE 1264
            ENP +C +IEKVVR+ + +GT    +L   Q SL +D+QV DE
Sbjct: 374  ENPTICDEIEKVVRAMIPEGTRHMSLLAFGQSSLTEDDQVYDE 416


>ref|XP_006441022.1| hypothetical protein CICLE_v10020181mg [Citrus clementina]
           gi|557543284|gb|ESR54262.1| hypothetical protein
           CICLE_v10020181mg [Citrus clementina]
          Length = 440

 Score =  444 bits (1143), Expect(2) = e-160
 Identities = 238/294 (80%), Positives = 255/294 (86%), Gaps = 14/294 (4%)
 Frame = +1

Query: 82  FHSKTHPTFLF---SSLQIPLSRLRFSNRFDWKCTRARS-------EFNGSLSGDT---- 219
           F+ KTH   L    S L    SR RF      K + AR        EF+G ++G +    
Sbjct: 26  FNMKTHLCLLSISSSPLHCQSSRSRFFTASS-KLSAARKRDKKISCEFDGKVNGFSSDSG 84

Query: 220 DQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRGR 399
           D R +DRQ+AL+AAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLP+GR
Sbjct: 85  DSRFLDRQRALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGR 144

Query: 400 IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPD 579
           IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP+YS+ALGVD+ENLIVCQPD
Sbjct: 145 IVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKALGVDVENLIVCQPD 204

Query: 580 NGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQAMRKMSG 759
           NGEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQA+RKMSG
Sbjct: 205 NGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMSG 264

Query: 760 NASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSV 921
           NASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLEIRSTGKIKSV
Sbjct: 265 NASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSV 318



 Score =  150 bits (380), Expect(2) = e-160
 Identities = 71/103 (68%), Positives = 89/103 (86%), Gaps = 1/103 (0%)
 Frame = +2

Query: 959  VSRPYKQAEFDIIFGDGVNKLGCILDCAEVMDIIVKKGSWYSYEDHRLGQGRDKALQYLR 1138
            VSRPYKQAEF+IIFG+GV+KLGC+LDCAE+MDI+V+KG+WYSY D RLGQGRDKALQYLR
Sbjct: 337  VSRPYKQAEFEIIFGEGVSKLGCMLDCAEMMDIVVRKGAWYSYGDQRLGQGRDKALQYLR 396

Query: 1139 ENPLLCSDIEKVVRSKMADGTIQTGVLQRQLSLV-QDEQVIDE 1264
            +NPLL  +IEKVVRS M+DG++  G   R +SL  Q+E +++E
Sbjct: 397  DNPLLQEEIEKVVRSMMSDGSVHQGSFLRNVSLPNQEENILEE 439


>ref|XP_004288592.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
           [Fragaria vesca subsp. vesca]
          Length = 418

 Score =  448 bits (1152), Expect(2) = e-160
 Identities = 240/287 (83%), Positives = 253/287 (88%), Gaps = 5/287 (1%)
 Frame = +1

Query: 76  HYFHSKTHPTFLFSSLQIPLSRLRFSNRFDWKCTRARSEF----NGSLS-GDTDQRLIDR 240
           HY  + T    LF S  +P    RF N       R RSE     NG+LS  D+D   +DR
Sbjct: 14  HYMSTPT--PLLFHSCSLPQ---RF-NLQSMAAKRVRSELQVKVNGALSTADSDSLFLDR 67

Query: 241 QKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRGRIVEIFGP 420
           QKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLP+GRIVEIFGP
Sbjct: 68  QKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPKGRIVEIFGP 127

Query: 421 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDNGEMALE 600
           ESSGKTTLALHAIAEVQ+LGGNAMLVDAEHAFDPAYS+ALGVD+ENLIVCQPD+GEMALE
Sbjct: 128 ESSGKTTLALHAIAEVQRLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDHGEMALE 187

Query: 601 TADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQAMRKMSGNASKAGC 780
            ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQA+RKMSGNASKAGC
Sbjct: 188 IADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGC 247

Query: 781 TLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKSV 921
           TLIFLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLEIRSTGKIKSV
Sbjct: 248 TLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKSV 294



 Score =  147 bits (370), Expect(2) = e-160
 Identities = 67/85 (78%), Positives = 77/85 (90%)
 Frame = +2

Query: 959  VSRPYKQAEFDIIFGDGVNKLGCILDCAEVMDIIVKKGSWYSYEDHRLGQGRDKALQYLR 1138
            VSRPYKQAEF+I+FG+GV+KLGCILDCAE+MD+IVKKGSWYSY DHRLGQGRDK+LQYLR
Sbjct: 313  VSRPYKQAEFEIVFGEGVSKLGCILDCAEMMDVIVKKGSWYSYGDHRLGQGRDKSLQYLR 372

Query: 1139 ENPLLCSDIEKVVRSKMADGTIQTG 1213
            ENP+L  +IEK+VRS M D T Q G
Sbjct: 373  ENPVLLDEIEKIVRSTMTDATGQVG 397


>ref|XP_002271727.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
           [Vitis vinifera]
          Length = 415

 Score =  445 bits (1144), Expect(2) = e-160
 Identities = 231/286 (80%), Positives = 248/286 (86%)
 Frame = +1

Query: 61  LPVKVHYFHSKTHPTFLFSSLQIPLSRLRFSNRFDWKCTRARSEFNGSLSGDTDQRLIDR 240
           L +  H+F  KT     F S  +P        +   +C     + NG+LS D D R +DR
Sbjct: 6   LALNFHHFPLKTLLPSAFPSSSLPPHMGAKRQQMRLRC-EFEVKVNGALSSDPDPRFLDR 64

Query: 241 QKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRGRIVEIFGP 420
           QKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLP+GRIVEI+GP
Sbjct: 65  QKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGLPKGRIVEIYGP 124

Query: 421 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDNGEMALE 600
           ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+ENLIVCQPD+GEMALE
Sbjct: 125 ESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQPDHGEMALE 184

Query: 601 TADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQAMRKMSGNASKAGC 780
            ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQA+RKMSGNASKAGC
Sbjct: 185 IADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGNASKAGC 244

Query: 781 TLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKS 918
           TLIFLNQIRYKIGV+YGNPEVTSGGIALKFFAS+RLEIR  GKIKS
Sbjct: 245 TLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEIRPIGKIKS 290



 Score =  150 bits (378), Expect(2) = e-160
 Identities = 71/104 (68%), Positives = 88/104 (84%), Gaps = 2/104 (1%)
 Frame = +2

Query: 959  VSRPYKQAEFDIIFGDGVNKLGCILDCAEVMDIIVKKGSWYSYEDHRLGQGRDKALQYLR 1138
            VSRPYKQAEF+IIFG+GV+KLGCILDCAE+MD++VKKGSWYSY D+RLGQGRD+ALQYLR
Sbjct: 310  VSRPYKQAEFEIIFGEGVSKLGCILDCAELMDVVVKKGSWYSYGDNRLGQGRDRALQYLR 369

Query: 1139 ENPLLCSDIEKVVRSKMADGTIQTGVLQRQLSLV--QDEQVIDE 1264
            ENPL+C +IEK+VR  MA+G  Q G    +LS    +DE +++E
Sbjct: 370  ENPLVCHEIEKIVRPMMAEGIGQLGAPHVRLSPTSPEDEDILEE 413


>ref|XP_007022303.1| RecA DNA recombination family protein isoform 1 [Theobroma cacao]
           gi|508721931|gb|EOY13828.1| RecA DNA recombination
           family protein isoform 1 [Theobroma cacao]
          Length = 485

 Score =  446 bits (1148), Expect(2) = e-160
 Identities = 224/242 (92%), Positives = 237/242 (97%)
 Frame = +1

Query: 196 NGSLSGDTDQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLAL 375
           NG+LS ++D R +DRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLDLAL
Sbjct: 121 NGALSPNSDSRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDLAL 180

Query: 376 GGGLPRGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIE 555
           GGGLP+GRIVE++GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+E
Sbjct: 181 GGGLPKGRIVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVE 240

Query: 556 NLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMS 735
           NLIVCQPDNGEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMS
Sbjct: 241 NLIVCQPDNGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMS 300

Query: 736 QAMRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIK 915
           QA+RKMSGNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLEIR +GKIK
Sbjct: 301 QALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRPSGKIK 360

Query: 916 SV 921
           SV
Sbjct: 361 SV 362



 Score =  147 bits (372), Expect(2) = e-160
 Identities = 73/104 (70%), Positives = 88/104 (84%), Gaps = 2/104 (1%)
 Frame = +2

Query: 959  VSRPYKQAEFDIIFGDGVNKLGCILDCAEVMDIIVKKGSWYSYEDHRLGQGRDKALQYLR 1138
            VSRPYKQAEF+IIFG+GV+KLGCILDCAE+MD++VKKGSWYSY +HRLGQGRDKALQYLR
Sbjct: 381  VSRPYKQAEFEIIFGEGVSKLGCILDCAEMMDVVVKKGSWYSYGEHRLGQGRDKALQYLR 440

Query: 1139 ENPLLCSDIEKVVRSKMADGTI-QTGVLQRQLSL-VQDEQVIDE 1264
            +NP+L  +IEK+VRS MADGT+  +    + LSL  QDE   +E
Sbjct: 441  DNPVLHGEIEKIVRSMMADGTLHMSSAPVKSLSLPPQDENNYEE 484


>ref|XP_006836393.1| hypothetical protein AMTR_s00092p00136000 [Amborella trichopoda]
           gi|548838911|gb|ERM99246.1| hypothetical protein
           AMTR_s00092p00136000 [Amborella trichopoda]
          Length = 406

 Score =  452 bits (1163), Expect(2) = e-160
 Identities = 237/292 (81%), Positives = 253/292 (86%), Gaps = 2/292 (0%)
 Frame = +1

Query: 49  MDAVLPVKVHYFHSKTHPTFLFSSLQIPLSRLRFSN--RFDWKCTRARSEFNGSLSGDTD 222
           MD + P K + F     P        +  S LRF    R  ++C  A ++ NG+L  D D
Sbjct: 1   MDCICPSKFYAFPVNKFP--------LVCSNLRFERILRVRFRCD-AEAKGNGALFSDAD 51

Query: 223 QRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRGRI 402
            R +DRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETF SGCLTLDLALGGGLP+GRI
Sbjct: 52  SRSVDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFSSGCLTLDLALGGGLPKGRI 111

Query: 403 VEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQPDN 582
           VEI+GPESSGKTTLALHA+AEVQKLGGNAMLVDAEHAFDPAYSR+LGVD+ENLIVCQPDN
Sbjct: 112 VEIYGPESSGKTTLALHAMAEVQKLGGNAMLVDAEHAFDPAYSRSLGVDVENLIVCQPDN 171

Query: 583 GEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQAMRKMSGN 762
           GEMALETADRMCRSGA+DLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQA+RKMSGN
Sbjct: 172 GEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMSGN 231

Query: 763 ASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKS 918
           ASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIR  GKIKS
Sbjct: 232 ASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRPIGKIKS 283



 Score =  141 bits (355), Expect(2) = e-160
 Identities = 65/80 (81%), Positives = 73/80 (91%)
 Frame = +2

Query: 959  VSRPYKQAEFDIIFGDGVNKLGCILDCAEVMDIIVKKGSWYSYEDHRLGQGRDKALQYLR 1138
            VSRPYKQAEFDIIFG+GV  LGCILDCAE+MDI+ +KGSWYSY D RLGQGRDKALQYLR
Sbjct: 303  VSRPYKQAEFDIIFGEGVGNLGCILDCAEMMDIVSRKGSWYSYSDLRLGQGRDKALQYLR 362

Query: 1139 ENPLLCSDIEKVVRSKMADG 1198
            ENPLLC+++EK VRS M+DG
Sbjct: 363  ENPLLCTELEKGVRSAMSDG 382


>emb|CBI21810.3| unnamed protein product [Vitis vinifera]
          Length = 384

 Score =  443 bits (1139), Expect(2) = e-160
 Identities = 226/251 (90%), Positives = 237/251 (94%), Gaps = 4/251 (1%)
 Frame = +1

Query: 178 RARSEF----NGSLSGDTDQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFP 345
           R R EF    NG+LS D D R +DRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFP
Sbjct: 9   RLRCEFEVKVNGALSSDPDPRFLDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFP 68

Query: 346 SGCLTLDLALGGGLPRGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPA 525
           SGCLTLD ALGGGLP+GRIVEI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPA
Sbjct: 69  SGCLTLDFALGGGLPKGRIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPA 128

Query: 526 YSRALGVDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQ 705
           YS+ALGVD+ENLIVCQPD+GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQ
Sbjct: 129 YSKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQ 188

Query: 706 QMGLQARLMSQAMRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVR 885
           QMGLQARLMSQA+RKMSGNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFAS+R
Sbjct: 189 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLR 248

Query: 886 LEIRSTGKIKS 918
           LEIR  GKIKS
Sbjct: 249 LEIRPIGKIKS 259



 Score =  150 bits (378), Expect(2) = e-160
 Identities = 71/104 (68%), Positives = 88/104 (84%), Gaps = 2/104 (1%)
 Frame = +2

Query: 959  VSRPYKQAEFDIIFGDGVNKLGCILDCAEVMDIIVKKGSWYSYEDHRLGQGRDKALQYLR 1138
            VSRPYKQAEF+IIFG+GV+KLGCILDCAE+MD++VKKGSWYSY D+RLGQGRD+ALQYLR
Sbjct: 279  VSRPYKQAEFEIIFGEGVSKLGCILDCAELMDVVVKKGSWYSYGDNRLGQGRDRALQYLR 338

Query: 1139 ENPLLCSDIEKVVRSKMADGTIQTGVLQRQLSLV--QDEQVIDE 1264
            ENPL+C +IEK+VR  MA+G  Q G    +LS    +DE +++E
Sbjct: 339  ENPLVCHEIEKIVRPMMAEGIGQLGAPHVRLSPTSPEDEDILEE 382


>ref|XP_007133319.1| hypothetical protein PHAVU_011G169700g [Phaseolus vulgaris]
           gi|561006319|gb|ESW05313.1| hypothetical protein
           PHAVU_011G169700g [Phaseolus vulgaris]
          Length = 415

 Score =  453 bits (1166), Expect(2) = e-159
 Identities = 241/294 (81%), Positives = 256/294 (87%), Gaps = 4/294 (1%)
 Frame = +1

Query: 49  MDAVLPVKVHYFHSKTHPTFLFSSLQIPLSRLRFSNRFDWKCTRARSEF----NGSLSGD 216
           MD + P+K H    K     LFSSL  PL  LRF     +K    + E     NG+LSGD
Sbjct: 1   MDLMFPLKPHSVILKAP---LFSSLLFPLP-LRFRAVTAFKHANIQCELEGRPNGALSGD 56

Query: 217 TDQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRG 396
            D R IDRQKALEAAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLP+G
Sbjct: 57  FDPRFIDRQKALEAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKG 116

Query: 397 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQP 576
           RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+ENLIVCQP
Sbjct: 117 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQP 176

Query: 577 DNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQAMRKMS 756
           D+GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQA+RKMS
Sbjct: 177 DHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMS 236

Query: 757 GNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKS 918
           GNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFAS+RLE+R  GKIKS
Sbjct: 237 GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEVRPAGKIKS 290



 Score =  137 bits (346), Expect(2) = e-159
 Identities = 65/105 (61%), Positives = 84/105 (80%), Gaps = 2/105 (1%)
 Frame = +2

Query: 959  VSRPYKQAEFDIIFGDGVNKLGCILDCAEVMDIIVKKGSWYSYEDHRLGQGRDKALQYLR 1138
            VSRPYK AEF+IIFG+G++KLGCILDCAE+ DI++KKGSWYSY DHRLGQGRDKA+QYL+
Sbjct: 310  VSRPYKLAEFEIIFGEGISKLGCILDCAEMTDIVLKKGSWYSYGDHRLGQGRDKAIQYLK 369

Query: 1139 ENPLLCSDIEKVVRSKMADGTIQTGVLQRQLS--LVQDEQVIDET 1267
            EN  L  +IEKVVRS + DG+ Q  +   + S  L +D+ + +E+
Sbjct: 370  ENTNLLEEIEKVVRSSLVDGSNQASLAHMKNSPVLHEDDDIFEES 414


>ref|XP_002466766.1| hypothetical protein SORBIDRAFT_01g013810 [Sorghum bicolor]
           gi|241920620|gb|EER93764.1| hypothetical protein
           SORBIDRAFT_01g013810 [Sorghum bicolor]
          Length = 415

 Score =  445 bits (1145), Expect(2) = e-159
 Identities = 225/255 (88%), Positives = 239/255 (93%), Gaps = 5/255 (1%)
 Frame = +1

Query: 169 KCTRARSEF-----NGSLSGDTDQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALV 333
           +  R R EF     NG+LSG+ D RL+DRQKAL+AAMNDIN+SFGKGSVTRLGSAGGA V
Sbjct: 38  RARRLRCEFVAGGGNGALSGEDDPRLVDRQKALDAAMNDINSSFGKGSVTRLGSAGGAFV 97

Query: 334 ETFPSGCLTLDLALGGGLPRGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHA 513
           ETFPSGCLTLD ALGGGLP+GR+VE++GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHA
Sbjct: 98  ETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHA 157

Query: 514 FDPAYSRALGVDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGE 693
           FDPAYS+ALGVDIENLIVCQPDNGEMALE ADRMCRSGAIDLIC+DSVSALTPRAEIEGE
Sbjct: 158 FDPAYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGE 217

Query: 694 IGMQQMGLQARLMSQAMRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFF 873
           IGMQQMGLQARLMSQA+RKMSGNASKAGCTL+FLNQIRYKIGVFYGNPEVTSGGIALKFF
Sbjct: 218 IGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFF 277

Query: 874 ASVRLEIRSTGKIKS 918
           ASVRLEIR  GKIKS
Sbjct: 278 ASVRLEIRPIGKIKS 292



 Score =  145 bits (365), Expect(2) = e-159
 Identities = 68/103 (66%), Positives = 86/103 (83%), Gaps = 1/103 (0%)
 Frame = +2

Query: 959  VSRPYKQAEFDIIFGDGVNKLGCILDCAEVMDIIVKKGSWYSYEDHRLGQGRDKALQYLR 1138
            VSRPYKQAEF+IIFG+GV+KLGC+LDCAE+MD++ KKGSWYSY+D RLGQGR+KALQYLR
Sbjct: 312  VSRPYKQAEFEIIFGEGVSKLGCVLDCAELMDVVAKKGSWYSYKDIRLGQGREKALQYLR 371

Query: 1139 ENPLLCSDIEKVVRSKMADGTIQTGVLQ-RQLSLVQDEQVIDE 1264
            E+P +C +IEKVVR+ + +G+    +L   Q S  +DEQV DE
Sbjct: 372  ESPTICDEIEKVVRAMIPEGSRHMSLLAFGQTSSTEDEQVYDE 414


>ref|XP_004243994.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
           [Solanum lycopersicum]
          Length = 419

 Score =  456 bits (1172), Expect(2) = e-158
 Identities = 236/294 (80%), Positives = 255/294 (86%), Gaps = 4/294 (1%)
 Frame = +1

Query: 49  MDAVLPVKVHYFHSKTHPTFLFSSLQIPLSRLRFSNRFDWKCTRARSEF----NGSLSGD 216
           M+   PVK   F SK     L  S  +   +     +F     R RSEF    NG+ S D
Sbjct: 1   MELTFPVKAQLFGSKIGHKSLSYSTSVKFYQKVSRPQFSACGIRVRSEFDHKINGAFSPD 60

Query: 217 TDQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRG 396
           +D R++DRQKAL+AAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGG+P+G
Sbjct: 61  SDARILDRQKALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGIPKG 120

Query: 397 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQP 576
           RIVEI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+ENLIVCQP
Sbjct: 121 RIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQP 180

Query: 577 DNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQAMRKMS 756
           DNGEMALE ADRMCRSGA+DLIC+DSVSALTPRAEIEGEIGMQQMGLQARLMSQA+RKMS
Sbjct: 181 DNGEMALEIADRMCRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMS 240

Query: 757 GNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKS 918
           GNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLEIRSTGKIKS
Sbjct: 241 GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKS 294



 Score =  133 bits (335), Expect(2) = e-158
 Identities = 61/104 (58%), Positives = 84/104 (80%), Gaps = 2/104 (1%)
 Frame = +2

Query: 959  VSRPYKQAEFDIIFGDGVNKLGCILDCAEVMDIIVKKGSWYSYEDHRLGQGRDKALQYLR 1138
            VSRPYKQAEF+I+FG+GV+KLGC+LDCAE+++++ KKGSWY+Y +HRLGQGR+KALQYLR
Sbjct: 314  VSRPYKQAEFEIMFGEGVSKLGCVLDCAELIEVVAKKGSWYNYGEHRLGQGREKALQYLR 373

Query: 1139 ENPLLCSDIEKVVRSKM--ADGTIQTGVLQRQLSLVQDEQVIDE 1264
            ENPLL  +IEK+VRS +   +G + +  L+  L  + +E  + E
Sbjct: 374  ENPLLSEEIEKMVRSSVLETNGFLGSSSLKHPLPQLLEEDALQE 417


>ref|XP_003546633.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
           [Glycine max]
          Length = 414

 Score =  450 bits (1157), Expect(2) = e-158
 Identities = 238/294 (80%), Positives = 255/294 (86%), Gaps = 4/294 (1%)
 Frame = +1

Query: 49  MDAVLPVKVHYFHSKTHPTFLFSSLQIPLSRLRFSNRFDWKCTRARSEF----NGSLSGD 216
           MD + P+K H    K     L SSL  P   LRF     +K    + E     NG+LSGD
Sbjct: 1   MDLMFPLKPHCVILKAP---LSSSLLFPFP-LRFRAVTAFKHANIQCELEGRPNGALSGD 56

Query: 217 TDQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRG 396
            D R IDRQKALEAAMNDINN+FGKGSVTRLGSAGGALVETFPSGCLTLD ALGGGLP+G
Sbjct: 57  FDPRFIDRQKALEAAMNDINNNFGKGSVTRLGSAGGALVETFPSGCLTLDCALGGGLPKG 116

Query: 397 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQP 576
           RI+EI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+ENLIVCQP
Sbjct: 117 RIIEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQP 176

Query: 577 DNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQAMRKMS 756
           D+GEMALE ADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ+GLQARLMSQA+RKMS
Sbjct: 177 DHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQIGLQARLMSQALRKMS 236

Query: 757 GNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKS 918
           GNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFAS+RLE+R TGKIKS
Sbjct: 237 GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLRLEVRPTGKIKS 290



 Score =  139 bits (350), Expect(2) = e-158
 Identities = 68/104 (65%), Positives = 83/104 (79%), Gaps = 2/104 (1%)
 Frame = +2

Query: 959  VSRPYKQAEFDIIFGDGVNKLGCILDCAEVMDIIVKKGSWYSYEDHRLGQGRDKALQYLR 1138
            VSRPYK AEF+IIFG+G++KLGCILDCAE+ DI+ KKGSWYSY DHRLGQGRDKA+QYL+
Sbjct: 310  VSRPYKIAEFEIIFGEGISKLGCILDCAEMTDIVSKKGSWYSYGDHRLGQGRDKAIQYLK 369

Query: 1139 ENPLLCSDIEKVVRSKMADGTIQTGVLQRQLSLV--QDEQVIDE 1264
            EN  L  +IEKVVRS + DGT QT  +  + S V  QD+ + +E
Sbjct: 370  ENTHLLEEIEKVVRSSLIDGTNQTSPVHMKNSSVLHQDDDMFEE 413


>ref|XP_006346054.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
           [Solanum tuberosum]
          Length = 419

 Score =  455 bits (1171), Expect(2) = e-158
 Identities = 235/294 (79%), Positives = 255/294 (86%), Gaps = 4/294 (1%)
 Frame = +1

Query: 49  MDAVLPVKVHYFHSKTHPTFLFSSLQIPLSRLRFSNRFDWKCTRARSEF----NGSLSGD 216
           M+   PVK  +F SK        S  +   +     +F  +  R RSEF    NG+ S D
Sbjct: 1   MELTFPVKAQFFGSKIGYKSQSYSTSVKFYQKVSRPQFPARGIRVRSEFDHKINGTFSPD 60

Query: 217 TDQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLALGGGLPRG 396
           +D R +DRQKAL+AAMNDIN+SFGKGSVTRLGSAGGALVETFPSGCLTLD ALGGG+P+G
Sbjct: 61  SDARFLDRQKALDAAMNDINSSFGKGSVTRLGSAGGALVETFPSGCLTLDFALGGGIPKG 120

Query: 397 RIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIENLIVCQP 576
           RIVEI+GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVD+ENLIVCQP
Sbjct: 121 RIVEIYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDVENLIVCQP 180

Query: 577 DNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQAMRKMS 756
           DNGEMALE ADRMCRSGA+DLIC+DSVSALTPRAEIEGEIGMQQMGLQARLMSQA+RKMS
Sbjct: 181 DNGEMALEIADRMCRSGAVDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQALRKMS 240

Query: 757 GNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIKS 918
           GNASKAGCTLIFLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLEIRSTGKIKS
Sbjct: 241 GNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSTGKIKS 294



 Score =  133 bits (335), Expect(2) = e-158
 Identities = 61/104 (58%), Positives = 84/104 (80%), Gaps = 2/104 (1%)
 Frame = +2

Query: 959  VSRPYKQAEFDIIFGDGVNKLGCILDCAEVMDIIVKKGSWYSYEDHRLGQGRDKALQYLR 1138
            VSRPYKQAEF+I+FG+GV+KLGC+LDCAE+++++ KKGSWY+Y +HRLGQGR+KALQYLR
Sbjct: 314  VSRPYKQAEFEIMFGEGVSKLGCVLDCAELIEVVAKKGSWYNYGEHRLGQGREKALQYLR 373

Query: 1139 ENPLLCSDIEKVVRSKMAD--GTIQTGVLQRQLSLVQDEQVIDE 1264
            ENPLL  +IEK+VRS + +  G + +  L+  L  + +E  + E
Sbjct: 374  ENPLLSEEIEKMVRSSVLETTGFLGSSSLKHPLPQLLEEDALQE 417


>ref|XP_006651624.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like,
           partial [Oryza brachyantha]
          Length = 371

 Score =  444 bits (1142), Expect(2) = e-158
 Identities = 222/241 (92%), Positives = 234/241 (97%)
 Frame = +1

Query: 196 NGSLSGDTDQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPSGCLTLDLAL 375
           NG+LSG+ D RLIDRQKAL+AAMNDIN+SFGKGSVTRLGSAGGA VETFPSGCLTLD AL
Sbjct: 9   NGALSGEDDPRLIDRQKALDAAMNDINSSFGKGSVTRLGSAGGAFVETFPSGCLTLDFAL 68

Query: 376 GGGLPRGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSRALGVDIE 555
           GGGLP+GR+VE++GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYS+ALGVDIE
Sbjct: 69  GGGLPKGRVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAYSKALGVDIE 128

Query: 556 NLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMS 735
           NLIVCQPDNGEMALE ADRMCRSGAIDLIC+DSVSALTPRAEIEGEIGMQQMGLQARLMS
Sbjct: 129 NLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMS 188

Query: 736 QAMRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRSTGKIK 915
           QA+RKMSGNASKAGCTL+FLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIR  GKIK
Sbjct: 189 QALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRPIGKIK 248

Query: 916 S 918
           S
Sbjct: 249 S 249



 Score =  144 bits (363), Expect(2) = e-158
 Identities = 67/103 (65%), Positives = 86/103 (83%), Gaps = 1/103 (0%)
 Frame = +2

Query: 959  VSRPYKQAEFDIIFGDGVNKLGCILDCAEVMDIIVKKGSWYSYEDHRLGQGRDKALQYLR 1138
            VSRPYKQAEF+IIFG+GV+KLGC+LDCAE+M+++ KKGSWYSY+D RLGQGR+KALQYLR
Sbjct: 269  VSRPYKQAEFEIIFGEGVSKLGCVLDCAELMEVVAKKGSWYSYKDMRLGQGREKALQYLR 328

Query: 1139 ENPLLCSDIEKVVRSKMADGTIQTGVLQ-RQLSLVQDEQVIDE 1264
            E+P +C +IEK VR+ + +GT    +L   Q SL ++EQV DE
Sbjct: 329  ESPTICDEIEKAVRAMIPEGTRHESLLAFGQSSLTEEEQVYDE 371


>ref|NP_001148809.1| protein recA [Zea mays] gi|195622282|gb|ACG32971.1| protein recA
           [Zea mays] gi|238008650|gb|ACR35360.1| unknown [Zea
           mays] gi|414871794|tpg|DAA50351.1| TPA: putative recA
           DNA recombination family protein isoform 1 [Zea mays]
           gi|414871795|tpg|DAA50352.1| TPA: putative recA DNA
           recombination family protein isoform 2 [Zea mays]
          Length = 415

 Score =  445 bits (1144), Expect(2) = e-158
 Identities = 224/255 (87%), Positives = 238/255 (93%), Gaps = 5/255 (1%)
 Frame = +1

Query: 169 KCTRARSEF-----NGSLSGDTDQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALV 333
           +  R R EF     NG+LSG+ D RL+DRQK L+AAMNDINNSFGKGSVTRLGSAGGA V
Sbjct: 38  RARRLRCEFVAGGGNGALSGEDDPRLVDRQKVLDAAMNDINNSFGKGSVTRLGSAGGAFV 97

Query: 334 ETFPSGCLTLDLALGGGLPRGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHA 513
           ETFPSGCLTLD ALGGGLP+GR+VE++GPESSGKTTLALHAIAE+QKLGGNAMLVDAEHA
Sbjct: 98  ETFPSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEIQKLGGNAMLVDAEHA 157

Query: 514 FDPAYSRALGVDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGE 693
           FDPAYS+ALGVDIENLIVCQPDNGEMALE ADRMCRSGAIDLIC+DSVSALTPRAEIEGE
Sbjct: 158 FDPAYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGE 217

Query: 694 IGMQQMGLQARLMSQAMRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFF 873
           IGMQQMGLQARLMSQA+RKMSGNASKAGCTL+FLNQIRYKIGVFYGNPEVTSGGIALKFF
Sbjct: 218 IGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFF 277

Query: 874 ASVRLEIRSTGKIKS 918
           ASVRLEIR  GKIKS
Sbjct: 278 ASVRLEIRLIGKIKS 292



 Score =  142 bits (357), Expect(2) = e-158
 Identities = 67/103 (65%), Positives = 84/103 (81%), Gaps = 1/103 (0%)
 Frame = +2

Query: 959  VSRPYKQAEFDIIFGDGVNKLGCILDCAEVMDIIVKKGSWYSYEDHRLGQGRDKALQYLR 1138
            VSRPYKQAEF+IIFG+GV+KLGC+LDCAE+MD++ KKGSWYSY+D RLGQGR+KALQYLR
Sbjct: 312  VSRPYKQAEFEIIFGEGVSKLGCVLDCAELMDVVAKKGSWYSYKDIRLGQGREKALQYLR 371

Query: 1139 ENPLLCSDIEKVVRSKMADGTIQTGVLQ-RQLSLVQDEQVIDE 1264
            E+P  C +IEKVVR+ + +G+    +L   Q S  +DEQ  DE
Sbjct: 372  ESPTTCDEIEKVVRAMIPEGSRHMSLLAFGQSSSTEDEQAYDE 414


>ref|XP_003562018.1| PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like
           isoform 1 [Brachypodium distachyon]
          Length = 412

 Score =  447 bits (1151), Expect(2) = e-158
 Identities = 224/250 (89%), Positives = 237/250 (94%)
 Frame = +1

Query: 169 KCTRARSEFNGSLSGDTDQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETFPS 348
           +C    S  NG+LSG+ D RLIDRQKAL+AAMNDINNSFGKGSVTRLGSAGGA VETFPS
Sbjct: 40  RCEFVASVGNGALSGEDDPRLIDRQKALDAAMNDINNSFGKGSVTRLGSAGGAFVETFPS 99

Query: 349 GCLTLDLALGGGLPRGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPAY 528
           GCLTLD ALGGGLP+GR+VE++GPESSGKTTLALHAIAE+QKLGGNAMLVDAEHAFDPAY
Sbjct: 100 GCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEIQKLGGNAMLVDAEHAFDPAY 159

Query: 529 SRALGVDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQQ 708
           S+ALGVDIENLIVCQPDNGEMALE ADRMCRSGAIDLIC+DSVSALTPRAEIEGEIGMQQ
Sbjct: 160 SKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQ 219

Query: 709 MGLQARLMSQAMRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRL 888
           MGLQARLMSQA+RKMSGNASKAGCTL+FLNQIRYKIGVFYGNPEVTSGGIALKFFASVRL
Sbjct: 220 MGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRL 279

Query: 889 EIRSTGKIKS 918
           EIR  GKIKS
Sbjct: 280 EIRHIGKIKS 289



 Score =  139 bits (349), Expect(2) = e-158
 Identities = 65/104 (62%), Positives = 86/104 (82%), Gaps = 2/104 (1%)
 Frame = +2

Query: 959  VSRPYKQAEFDIIFGDGVNKLGCILDCAEVMDIIVKKGSWYSYEDHRLGQGRDKALQYLR 1138
            VSRPYKQAEF+I+FG+GV+KLGCILDCAE+M+++ KKGSWYSY+D RLGQGR+KALQYLR
Sbjct: 309  VSRPYKQAEFEIMFGEGVSKLGCILDCAELMEVVAKKGSWYSYKDIRLGQGREKALQYLR 368

Query: 1139 ENPLLCSDIEKVVRSKMADGTIQTGVLQ--RQLSLVQDEQVIDE 1264
            E+P +C +IEKVVR+ + +GT    +L   +  S  ++E+V DE
Sbjct: 369  ESPTICDEIEKVVRAMIPEGTRHMTLLAFGQSSSPTEEEEVYDE 412


>ref|NP_001050738.1| Os03g0639700 [Oryza sativa Japonica Group]
           gi|108710024|gb|ABF97819.1| DNA repair protein recA,
           chloroplast precursor, putative, expressed [Oryza sativa
           Japonica Group] gi|113549209|dbj|BAF12652.1|
           Os03g0639700 [Oryza sativa Japonica Group]
           gi|215704578|dbj|BAG94211.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 418

 Score =  445 bits (1145), Expect(2) = e-157
 Identities = 226/252 (89%), Positives = 238/252 (94%), Gaps = 5/252 (1%)
 Frame = +1

Query: 178 RARSEF-----NGSLSGDTDQRLIDRQKALEAAMNDINNSFGKGSVTRLGSAGGALVETF 342
           R R EF     NG+LSG+ D RLIDRQKAL+AAMNDIN+SFGKGSVTRLGSAGGA VETF
Sbjct: 45  RLRCEFVAGGGNGALSGEDDPRLIDRQKALDAAMNDINSSFGKGSVTRLGSAGGAFVETF 104

Query: 343 PSGCLTLDLALGGGLPRGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP 522
           PSGCLTLD ALGGGLP+GR+VE++GPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP
Sbjct: 105 PSGCLTLDFALGGGLPKGRVVEVYGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDP 164

Query: 523 AYSRALGVDIENLIVCQPDNGEMALETADRMCRSGAIDLICVDSVSALTPRAEIEGEIGM 702
           AYS+ALGVDIENLIVCQPDNGEMALE ADRMCRSGAIDLIC+DSVSALTPRAEIEGEIGM
Sbjct: 165 AYSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGM 224

Query: 703 QQMGLQARLMSQAMRKMSGNASKAGCTLIFLNQIRYKIGVFYGNPEVTSGGIALKFFASV 882
           QQMGLQARLMSQA+RKMSGNASKAGCTL+FLNQIRYKIGVFYGNPEVTSGGIALKFFASV
Sbjct: 225 QQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASV 284

Query: 883 RLEIRSTGKIKS 918
           RLEIR  GKIKS
Sbjct: 285 RLEIRPIGKIKS 296



 Score =  138 bits (348), Expect(2) = e-157
 Identities = 64/103 (62%), Positives = 85/103 (82%), Gaps = 1/103 (0%)
 Frame = +2

Query: 959  VSRPYKQAEFDIIFGDGVNKLGCILDCAEVMDIIVKKGSWYSYEDHRLGQGRDKALQYLR 1138
            VSRPYKQAEF+IIFG+GV+KLGC+LDCAE+M+++ KKGSWYSY++ RLGQGR+KALQYLR
Sbjct: 316  VSRPYKQAEFEIIFGEGVSKLGCVLDCAELMEVVAKKGSWYSYKEMRLGQGREKALQYLR 375

Query: 1139 ENPLLCSDIEKVVRSKMADGTIQTGVLQ-RQLSLVQDEQVIDE 1264
            E+P +C +IEK VR+ + +G     +L   + SL ++EQV DE
Sbjct: 376  ESPTICDEIEKAVRAMIPEGARHMSLLAFGRSSLTEEEQVDDE 418