BLASTX nr result
ID: Sinomenium22_contig00013378
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00013378
(427 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prun... 87 3e-29
ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prun... 87 3e-29
ref|XP_007220384.1| hypothetical protein PRUPE_ppa021778mg [Prun... 86 5e-29
ref|XP_007200198.1| hypothetical protein PRUPE_ppa016013mg, part... 85 5e-23
ref|XP_007220740.1| hypothetical protein PRUPE_ppa023598mg [Prun... 69 7e-23
ref|XP_007213052.1| hypothetical protein PRUPE_ppa020415mg, part... 82 2e-22
ref|XP_007226836.1| hypothetical protein PRUPE_ppa017565mg, part... 63 7e-22
gb|EMS54598.1| Transposon Ty3-G Gag-Pol polyprotein [Triticum ur... 102 4e-20
ref|XP_007212569.1| hypothetical protein PRUPE_ppa015570mg, part... 68 3e-19
gb|AAM15062.1| putative retroelement integrase [Arabidopsis thal... 73 6e-18
ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [The... 66 1e-17
ref|XP_007045326.1| DNA/RNA polymerases superfamily protein [The... 66 1e-17
ref|XP_007049888.1| DNA/RNA polymerases superfamily protein, par... 66 1e-17
gb|AAQ72731.1| putative reverse transcriptase [Petunia x hybrida] 66 2e-17
ref|XP_007048683.1| DNA/RNA polymerases superfamily protein [The... 65 4e-17
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 65 1e-16
emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group] 65 1e-16
emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group] 65 1e-16
gb|AAM94350.1| gag-pol polyprotein [Zea mays] 64 1e-16
gb|AAQ56339.1| putative gag-pol polyprotein [Oryza sativa Japoni... 65 1e-16
>ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prunus persica]
gi|462402874|gb|EMJ08431.1| hypothetical protein
PRUPE_ppa026856mg [Prunus persica]
Length = 1493
Score = 86.7 bits (213), Expect(3) = 3e-29
Identities = 41/66 (62%), Positives = 54/66 (81%)
Frame = -2
Query: 198 SLKHFRGQKHIDRMLARWAAYLERFNYVIVHKSGVTNRVADALSRRATLLVTISTEVPGF 19
+LK+ QK+ID+M ARW +L++F++VI H SG TNRVADALSRRA+LL+T++ EV GF
Sbjct: 999 ALKYINSQKNIDKMHARWVTFLQKFSFVIKHTSGKTNRVADALSRRASLLITLTQEVVGF 1058
Query: 18 EQLKEL 1
E LKEL
Sbjct: 1059 ECLKEL 1064
Score = 46.6 bits (109), Expect(3) = 3e-29
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = -1
Query: 427 RFQWGEAADRSFELIKDKLSTAPVLSLPDFAK 332
RF WGE +RSF IK+KL TAPVL+LP+F K
Sbjct: 896 RFSWGEEQERSFADIKEKLCTAPVLALPNFEK 927
Score = 41.2 bits (95), Expect(3) = 3e-29
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = -3
Query: 338 RQDIAFFSEKLSDARQKWSTY 276
++ +AFFSEKLSDARQKWSTY
Sbjct: 948 KRPVAFFSEKLSDARQKWSTY 968
>ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
gi|462405925|gb|EMJ11389.1| hypothetical protein
PRUPE_ppa017790mg [Prunus persica]
Length = 1485
Score = 86.7 bits (213), Expect(3) = 3e-29
Identities = 41/66 (62%), Positives = 54/66 (81%)
Frame = -2
Query: 198 SLKHFRGQKHIDRMLARWAAYLERFNYVIVHKSGVTNRVADALSRRATLLVTISTEVPGF 19
+LK+ QK+ID+M ARW +L++F++VI H SG TNRVADALSRRA+LL+T++ EV GF
Sbjct: 991 ALKYINSQKNIDKMHARWVTFLQKFSFVIKHTSGKTNRVADALSRRASLLITLTQEVVGF 1050
Query: 18 EQLKEL 1
E LKEL
Sbjct: 1051 ECLKEL 1056
Score = 46.6 bits (109), Expect(3) = 3e-29
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = -1
Query: 427 RFQWGEAADRSFELIKDKLSTAPVLSLPDFAK 332
RF WGE +RSF IK+KL TAPVL+LP+F K
Sbjct: 888 RFSWGEEQERSFADIKEKLCTAPVLALPNFEK 919
Score = 41.2 bits (95), Expect(3) = 3e-29
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = -3
Query: 338 RQDIAFFSEKLSDARQKWSTY 276
++ +AFFSEKLSDARQKWSTY
Sbjct: 940 KRPVAFFSEKLSDARQKWSTY 960
>ref|XP_007220384.1| hypothetical protein PRUPE_ppa021778mg [Prunus persica]
gi|462416846|gb|EMJ21583.1| hypothetical protein
PRUPE_ppa021778mg [Prunus persica]
Length = 1384
Score = 85.9 bits (211), Expect(3) = 5e-29
Identities = 40/66 (60%), Positives = 54/66 (81%)
Frame = -2
Query: 198 SLKHFRGQKHIDRMLARWAAYLERFNYVIVHKSGVTNRVADALSRRATLLVTISTEVPGF 19
+LK+ QK+ID+M ARW +L++F++VI H SG TNRVADALSRRA++L+T++ EV GF
Sbjct: 916 ALKYINSQKNIDKMHARWVTFLQKFSFVIKHTSGKTNRVADALSRRASMLITLTQEVVGF 975
Query: 18 EQLKEL 1
E LKEL
Sbjct: 976 ECLKEL 981
Score = 46.6 bits (109), Expect(3) = 5e-29
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = -1
Query: 427 RFQWGEAADRSFELIKDKLSTAPVLSLPDFAK 332
RF WGE +RSF IK+KL TAPVL+LP+F K
Sbjct: 813 RFSWGEEQERSFADIKEKLCTAPVLALPNFEK 844
Score = 41.2 bits (95), Expect(3) = 5e-29
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = -3
Query: 338 RQDIAFFSEKLSDARQKWSTY 276
++ +AFFSEKLSDARQKWSTY
Sbjct: 865 KRPVAFFSEKLSDARQKWSTY 885
>ref|XP_007200198.1| hypothetical protein PRUPE_ppa016013mg, partial [Prunus persica]
gi|462395598|gb|EMJ01397.1| hypothetical protein
PRUPE_ppa016013mg, partial [Prunus persica]
Length = 1057
Score = 85.1 bits (209), Expect(3) = 5e-23
Identities = 41/66 (62%), Positives = 53/66 (80%)
Frame = -2
Query: 198 SLKHFRGQKHIDRMLARWAAYLERFNYVIVHKSGVTNRVADALSRRATLLVTISTEVPGF 19
+LK+ QK+ID+M ARW +L++F++ I H SG TNRVADALSRRA+LLVT++ EV GF
Sbjct: 574 ALKYINSQKNIDKMHARWVTFLQKFSFFIKHTSGKTNRVADALSRRASLLVTLTQEVVGF 633
Query: 18 EQLKEL 1
E LKEL
Sbjct: 634 ECLKEL 639
Score = 39.7 bits (91), Expect(3) = 5e-23
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = -3
Query: 338 RQDIAFFSEKLSDARQKWSTY 276
++ +AFFSEKLS+ARQKWSTY
Sbjct: 536 KRPVAFFSEKLSEARQKWSTY 556
Score = 28.5 bits (62), Expect(3) = 5e-23
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = -1
Query: 415 GEAADRSFELIKDKLSTAPVLSLPDFAK 332
G A K+KL TAPVL+LP+F K
Sbjct: 488 GRGAREKLCRYKEKLYTAPVLALPNFEK 515
>ref|XP_007220740.1| hypothetical protein PRUPE_ppa023598mg [Prunus persica]
gi|462417202|gb|EMJ21939.1| hypothetical protein
PRUPE_ppa023598mg [Prunus persica]
Length = 1457
Score = 69.3 bits (168), Expect(3) = 7e-23
Identities = 37/68 (54%), Positives = 46/68 (67%), Gaps = 4/68 (5%)
Frame = -2
Query: 192 KHFRGQKHI----DRMLARWAAYLERFNYVIVHKSGVTNRVADALSRRATLLVTISTEVP 25
+H+ QK D RW +L++F++VI H SG TNRV DALSRRA+LLVT + EV
Sbjct: 965 EHYLIQKEFVLFTDHQALRWVTFLQKFSFVIRHTSGKTNRVVDALSRRASLLVTQTQEVV 1024
Query: 24 GFEQLKEL 1
GFE LKEL
Sbjct: 1025 GFECLKEL 1032
Score = 45.4 bits (106), Expect(3) = 7e-23
Identities = 20/32 (62%), Positives = 25/32 (78%)
Frame = -1
Query: 427 RFQWGEAADRSFELIKDKLSTAPVLSLPDFAK 332
RF WG+ +RSF IK+KL TAPVL+LP+F K
Sbjct: 878 RFSWGDEQERSFADIKEKLCTAPVLALPNFEK 909
Score = 38.1 bits (87), Expect(3) = 7e-23
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = -3
Query: 338 RQDIAFFSEKLSDARQKWSTY 276
++ +AFFSEKLSDA QKWSTY
Sbjct: 930 KRPVAFFSEKLSDACQKWSTY 950
>ref|XP_007213052.1| hypothetical protein PRUPE_ppa020415mg, partial [Prunus persica]
gi|462408917|gb|EMJ14251.1| hypothetical protein
PRUPE_ppa020415mg, partial [Prunus persica]
Length = 840
Score = 82.0 bits (201), Expect(3) = 2e-22
Identities = 37/66 (56%), Positives = 53/66 (80%)
Frame = -2
Query: 198 SLKHFRGQKHIDRMLARWAAYLERFNYVIVHKSGVTNRVADALSRRATLLVTISTEVPGF 19
+LK+ QKHID+M ARW +L++F++VI H SG +N VADALS+RA+LLVT++ E+ GF
Sbjct: 496 ALKYIISQKHIDKMHARWVTFLQKFSFVIKHTSGTSNHVADALSKRASLLVTLTQEIVGF 555
Query: 18 EQLKEL 1
E L++L
Sbjct: 556 ECLRDL 561
Score = 48.1 bits (113), Expect(3) = 2e-22
Identities = 20/32 (62%), Positives = 26/32 (81%)
Frame = -1
Query: 427 RFQWGEAADRSFELIKDKLSTAPVLSLPDFAK 332
RF WGE ++SF L+K+KL TAPVL+LP+F K
Sbjct: 406 RFNWGEEQEKSFALVKEKLCTAPVLALPNFEK 437
Score = 21.6 bits (44), Expect(3) = 2e-22
Identities = 11/25 (44%), Positives = 15/25 (60%), Gaps = 4/25 (16%)
Frame = -3
Query: 338 RQDIAFFSEKLSD----ARQKWSTY 276
++ IAFF E LSD A ++W Y
Sbjct: 458 KRPIAFFFENLSDALVRALKQWKHY 482
>ref|XP_007226836.1| hypothetical protein PRUPE_ppa017565mg, partial [Prunus persica]
gi|462423772|gb|EMJ28035.1| hypothetical protein
PRUPE_ppa017565mg, partial [Prunus persica]
Length = 914
Score = 63.2 bits (152), Expect(3) = 7e-22
Identities = 33/66 (50%), Positives = 44/66 (66%)
Frame = -2
Query: 198 SLKHFRGQKHIDRMLARWAAYLERFNYVIVHKSGVTNRVADALSRRATLLVTISTEVPGF 19
+LK+ QKHID+M A+W H G +NRVADALSRRA+LLVT++ E+ GF
Sbjct: 484 ALKYINSQKHIDKMHAKW------------HTFGTSNRVADALSRRASLLVTLTQEIVGF 531
Query: 18 EQLKEL 1
+ LK+L
Sbjct: 532 KCLKDL 537
Score = 44.7 bits (104), Expect(3) = 7e-22
Identities = 18/32 (56%), Positives = 25/32 (78%)
Frame = -1
Query: 427 RFQWGEAADRSFELIKDKLSTAPVLSLPDFAK 332
RF WGE ++SF L+K+KL TA +L+LP+F K
Sbjct: 381 RFNWGEEQEKSFALVKEKLCTASILALPNFEK 412
Score = 41.6 bits (96), Expect(3) = 7e-22
Identities = 18/21 (85%), Positives = 20/21 (95%)
Frame = -3
Query: 338 RQDIAFFSEKLSDARQKWSTY 276
++ IAFFSEKLSDARQKWSTY
Sbjct: 433 KRPIAFFSEKLSDARQKWSTY 453
>gb|EMS54598.1| Transposon Ty3-G Gag-Pol polyprotein [Triticum urartu]
Length = 1704
Score = 102 bits (255), Expect = 4e-20
Identities = 49/66 (74%), Positives = 57/66 (86%)
Frame = -2
Query: 198 SLKHFRGQKHIDRMLARWAAYLERFNYVIVHKSGVTNRVADALSRRATLLVTISTEVPGF 19
SLKHFR QKH+DRMLAR AAYLERFN++IVHKSG+TNRVADALSRRA LL + E+ G
Sbjct: 549 SLKHFRNQKHVDRMLARRAAYLERFNHLIVHKSGITNRVADALSRRACLLTSFEAELSGM 608
Query: 18 EQLKEL 1
+Q+KEL
Sbjct: 609 DQIKEL 614
>ref|XP_007212569.1| hypothetical protein PRUPE_ppa015570mg, partial [Prunus persica]
gi|462408434|gb|EMJ13768.1| hypothetical protein
PRUPE_ppa015570mg, partial [Prunus persica]
Length = 541
Score = 67.8 bits (164), Expect(3) = 3e-19
Identities = 38/66 (57%), Positives = 45/66 (68%)
Frame = -2
Query: 198 SLKHFRGQKHIDRMLARWAAYLERFNYVIVHKSGVTNRVADALSRRATLLVTISTEVPGF 19
+LK+ QK+ID+M ARW H SG TNRVADALSRRA+LLVT++ EV GF
Sbjct: 110 ALKYITSQKNIDKMHARW------------HNSGKTNRVADALSRRASLLVTLTQEVVGF 157
Query: 18 EQLKEL 1
E LKEL
Sbjct: 158 ECLKEL 163
Score = 41.2 bits (95), Expect(3) = 3e-19
Identities = 17/21 (80%), Positives = 20/21 (95%)
Frame = -3
Query: 338 RQDIAFFSEKLSDARQKWSTY 276
++ +AFFSEKLSDARQKWSTY
Sbjct: 59 KRPVAFFSEKLSDARQKWSTY 79
Score = 31.6 bits (70), Expect(3) = 3e-19
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = -1
Query: 403 DRSFELIKDKLSTAPVLSLPDFAK 332
++SF K+KL TAPVL+LP+F K
Sbjct: 25 EKSFADTKEKLCTAPVLALPNFEK 48
>gb|AAM15062.1| putative retroelement integrase [Arabidopsis thaliana]
Length = 1215
Score = 72.8 bits (177), Expect(3) = 6e-18
Identities = 34/66 (51%), Positives = 49/66 (74%)
Frame = -2
Query: 198 SLKHFRGQKHIDRMLARWAAYLERFNYVIVHKSGVTNRVADALSRRATLLVTISTEVPGF 19
SLKH +GQ+ +++ ARW ++E F YVI +K G N VADALS+R TLL T++ ++ GF
Sbjct: 785 SLKHLKGQQKLNKRHARWVEFIETFAYVIKYKKGKDNVVADALSQRYTLLSTLNVKLMGF 844
Query: 18 EQLKEL 1
EQ+KE+
Sbjct: 845 EQIKEV 850
Score = 38.9 bits (89), Expect(3) = 6e-18
Identities = 16/32 (50%), Positives = 24/32 (75%)
Frame = -1
Query: 424 FQWGEAADRSFELIKDKLSTAPVLSLPDFAKT 329
F+W +A + +F+ +KDKL+ APVL L +F KT
Sbjct: 683 FKWEKAQEEAFQSLKDKLTNAPVLILSEFLKT 714
Score = 24.3 bits (51), Expect(3) = 6e-18
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -3
Query: 329 IAFFSEKLSDARQKWSTY 276
IAFFSEKL A + TY
Sbjct: 737 IAFFSEKLGGATLNYPTY 754
>ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508703673|gb|EOX95569.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 1452
Score = 65.9 bits (159), Expect(3) = 1e-17
Identities = 29/64 (45%), Positives = 45/64 (70%)
Frame = -2
Query: 198 SLKHFRGQKHIDRMLARWAAYLERFNYVIVHKSGVTNRVADALSRRATLLVTISTEVPGF 19
+L++ QK + A+W+++L FN+ + +KSG +N VADALSRR +L +ST+V GF
Sbjct: 906 ALRYLHSQKKLSNQHAKWSSFLNEFNFSLKYKSGQSNTVADALSRRCKMLSVMSTQVTGF 965
Query: 18 EQLK 7
E+LK
Sbjct: 966 EELK 969
Score = 38.9 bits (89), Expect(3) = 1e-17
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = -1
Query: 424 FQWGEAADRSFELIKDKLSTAPVLSLPDFAK 332
F+W +A ++FE +K ++ APVL+LPDF K
Sbjct: 804 FEWSHSAQKAFERVKALMTEAPVLALPDFEK 834
Score = 30.4 bits (67), Expect(3) = 1e-17
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = -3
Query: 329 IAFFSEKLSDARQKWSTY 276
I FFSEKL+D+R+++STY
Sbjct: 858 IEFFSEKLTDSRRRYSTY 875
>ref|XP_007045326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508709261|gb|EOY01158.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 786
Score = 65.9 bits (159), Expect(3) = 1e-17
Identities = 29/64 (45%), Positives = 45/64 (70%)
Frame = -2
Query: 198 SLKHFRGQKHIDRMLARWAAYLERFNYVIVHKSGVTNRVADALSRRATLLVTISTEVPGF 19
+L++ QK + A+W+++L FN+ + +KSG +N VADALSRR +L +ST+V GF
Sbjct: 358 ALRYLHSQKKLSNQHAKWSSFLNEFNFSLKYKSGQSNTVADALSRRCKMLSVMSTQVTGF 417
Query: 18 EQLK 7
E+LK
Sbjct: 418 EELK 421
Score = 38.9 bits (89), Expect(3) = 1e-17
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = -1
Query: 424 FQWGEAADRSFELIKDKLSTAPVLSLPDFAK 332
F+W +A ++FE +K ++ APVL+LPDF K
Sbjct: 256 FEWSHSAQKAFERVKALMTEAPVLALPDFEK 286
Score = 30.4 bits (67), Expect(3) = 1e-17
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = -3
Query: 329 IAFFSEKLSDARQKWSTY 276
I FFSEKL+D+R+++STY
Sbjct: 310 IEFFSEKLTDSRRRYSTY 327
>ref|XP_007049888.1| DNA/RNA polymerases superfamily protein, partial [Theobroma cacao]
gi|508702149|gb|EOX94045.1| DNA/RNA polymerases
superfamily protein, partial [Theobroma cacao]
Length = 624
Score = 65.9 bits (159), Expect(3) = 1e-17
Identities = 29/64 (45%), Positives = 45/64 (70%)
Frame = -2
Query: 198 SLKHFRGQKHIDRMLARWAAYLERFNYVIVHKSGVTNRVADALSRRATLLVTISTEVPGF 19
+L++ QK + A+W+++L FN+ + +KSG +N VADALSRR +L +ST+V GF
Sbjct: 358 ALRYLHSQKKLSNQHAKWSSFLNEFNFSLKYKSGQSNTVADALSRRCKMLSVMSTQVTGF 417
Query: 18 EQLK 7
E+LK
Sbjct: 418 EELK 421
Score = 38.9 bits (89), Expect(3) = 1e-17
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = -1
Query: 424 FQWGEAADRSFELIKDKLSTAPVLSLPDFAK 332
F+W +A ++FE +K ++ APVL+LPDF K
Sbjct: 256 FEWSHSAQKAFERVKALMTEAPVLALPDFEK 286
Score = 30.4 bits (67), Expect(3) = 1e-17
Identities = 12/18 (66%), Positives = 17/18 (94%)
Frame = -3
Query: 329 IAFFSEKLSDARQKWSTY 276
I FFSEKL+D+R+++STY
Sbjct: 310 IEFFSEKLTDSRRRYSTY 327
>gb|AAQ72731.1| putative reverse transcriptase [Petunia x hybrida]
Length = 435
Score = 66.2 bits (160), Expect(3) = 2e-17
Identities = 30/64 (46%), Positives = 45/64 (70%)
Frame = -2
Query: 198 SLKHFRGQKHIDRMLARWAAYLERFNYVIVHKSGVTNRVADALSRRATLLVTISTEVPGF 19
SLKH RGQ+ +++ A+W ++E F YVI +K G N VADALSR+ L T+++++ GF
Sbjct: 245 SLKHLRGQEKLNKRHAKWVEFIESFPYVIQYKKGKDNVVADALSRKFALATTLTSKLMGF 304
Query: 18 EQLK 7
E +K
Sbjct: 305 ESIK 308
Score = 42.7 bits (99), Expect(3) = 2e-17
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = -1
Query: 424 FQWGEAADRSFELIKDKLSTAPVLSLPDFAK 332
F WGE +++F+ +K +LSTAP+L LPDF K
Sbjct: 143 FVWGEPQEKAFQELKGRLSTAPLLQLPDFGK 173
Score = 25.0 bits (53), Expect(3) = 2e-17
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 329 IAFFSEKLSDARQKWSTY 276
IA+FSEKL A +STY
Sbjct: 197 IAYFSEKLKGASLNYSTY 214
>ref|XP_007048683.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508700944|gb|EOX92840.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 647
Score = 64.7 bits (156), Expect(3) = 4e-17
Identities = 29/64 (45%), Positives = 44/64 (68%)
Frame = -2
Query: 198 SLKHFRGQKHIDRMLARWAAYLERFNYVIVHKSGVTNRVADALSRRATLLVTISTEVPGF 19
+L++ QK + A+W+ +L FN+ + +KSG +N VADALSRR +L +ST+V GF
Sbjct: 174 ALRYLHSQKKLSNQHAKWSFFLNEFNFSLKYKSGQSNTVADALSRRCKMLSVMSTQVTGF 233
Query: 18 EQLK 7
E+LK
Sbjct: 234 EELK 237
Score = 37.7 bits (86), Expect(3) = 4e-17
Identities = 15/31 (48%), Positives = 22/31 (70%)
Frame = -1
Query: 424 FQWGEAADRSFELIKDKLSTAPVLSLPDFAK 332
F+W A ++FE +K ++ APVL+LPDF K
Sbjct: 72 FEWSHFAQKAFERVKALMTEAPVLALPDFEK 102
Score = 30.8 bits (68), Expect(3) = 4e-17
Identities = 12/20 (60%), Positives = 18/20 (90%)
Frame = -3
Query: 335 QDIAFFSEKLSDARQKWSTY 276
+ I FFSEKL+D+R+++STY
Sbjct: 124 RSIEFFSEKLTDSRRRYSTY 143
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 65.1 bits (157), Expect(3) = 1e-16
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = -2
Query: 198 SLKHFRGQKHIDRMLARWAAYLERFNYVIVHKSGVTNRVADALSRRATLLVTISTEVPGF 19
SLKH R Q ++R A+W ++E F YVI HK G N +ADALSRR TLL + ++ G
Sbjct: 1084 SLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLTQLDYKIFGL 1143
Query: 18 EQLKE 4
E +K+
Sbjct: 1144 ETIKD 1148
Score = 43.1 bits (100), Expect(3) = 1e-16
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = -1
Query: 424 FQWGEAADRSFELIKDKLSTAPVLSLPDFAKT 329
F WG + + +F ++KDKL+ AP+L LPDF KT
Sbjct: 982 FTWGTSQENAFHMLKDKLTHAPLLQLPDFNKT 1013
Score = 23.5 bits (49), Expect(3) = 1e-16
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 329 IAFFSEKLSDARQKWSTY 276
+A+FSEKLS +STY
Sbjct: 1036 VAYFSEKLSGPVLNYSTY 1053
>emb|CAE02303.2| OSJNBa0042F21.10 [Oryza sativa Japonica Group]
Length = 2388
Score = 65.1 bits (157), Expect(3) = 1e-16
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = -2
Query: 198 SLKHFRGQKHIDRMLARWAAYLERFNYVIVHKSGVTNRVADALSRRATLLVTISTEVPGF 19
SLKH R Q ++R A+W ++E F YVI HK G N +ADALSRR TLL + ++ G
Sbjct: 920 SLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLTQLDYKIFGL 979
Query: 18 EQLKE 4
E +K+
Sbjct: 980 ETIKD 984
Score = 43.1 bits (100), Expect(3) = 1e-16
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = -1
Query: 424 FQWGEAADRSFELIKDKLSTAPVLSLPDFAKT 329
F WG + + +F ++KDKL+ AP+L LPDF KT
Sbjct: 818 FTWGTSQENAFHMLKDKLTHAPLLQLPDFNKT 849
Score = 23.5 bits (49), Expect(3) = 1e-16
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 329 IAFFSEKLSDARQKWSTY 276
+A+FSEKLS +STY
Sbjct: 872 VAYFSEKLSGLVLNYSTY 889
>emb|CAE02465.2| OSJNBa0042D13.18 [Oryza sativa Japonica Group]
Length = 2241
Score = 65.1 bits (157), Expect(3) = 1e-16
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = -2
Query: 198 SLKHFRGQKHIDRMLARWAAYLERFNYVIVHKSGVTNRVADALSRRATLLVTISTEVPGF 19
SLKH R Q ++R A+W ++E F YVI HK G N +ADALSRR TLL + ++ G
Sbjct: 1178 SLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLTQLDYKIFGL 1237
Query: 18 EQLKE 4
E +K+
Sbjct: 1238 ETIKD 1242
Score = 43.1 bits (100), Expect(3) = 1e-16
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = -1
Query: 424 FQWGEAADRSFELIKDKLSTAPVLSLPDFAKT 329
F WG + + +F ++KDKL+ AP+L LPDF KT
Sbjct: 1076 FTWGTSQENAFHMLKDKLTHAPLLQLPDFNKT 1107
Score = 23.5 bits (49), Expect(3) = 1e-16
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 329 IAFFSEKLSDARQKWSTY 276
+A+FSEKLS +STY
Sbjct: 1130 VAYFSEKLSGPVLNYSTY 1147
>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
Length = 1618
Score = 63.9 bits (154), Expect(3) = 1e-16
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = -2
Query: 198 SLKHFRGQKHIDRMLARWAAYLERFNYVIVHKSGVTNRVADALSRRATLLVTISTEVPGF 19
SLKH R Q ++R A+W ++E F YVI HK G N +ADALSRR TLL + ++ G
Sbjct: 1087 SLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLNQLDYKIFGL 1146
Query: 18 EQLKE 4
E +K+
Sbjct: 1147 ETIKD 1151
Score = 43.5 bits (101), Expect(3) = 1e-16
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = -1
Query: 424 FQWGEAADRSFELIKDKLSTAPVLSLPDFAKT 329
F WG+ + +F ++KDKL+ AP+L LPDF KT
Sbjct: 985 FSWGKVQEHAFNVLKDKLTHAPLLQLPDFNKT 1016
Score = 24.3 bits (51), Expect(3) = 1e-16
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -3
Query: 329 IAFFSEKLSDARQKWSTY 276
+A+FSEKLS + +STY
Sbjct: 1039 VAYFSEKLSGSVLNYSTY 1056
>gb|AAQ56339.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
Length = 1234
Score = 65.1 bits (157), Expect(3) = 1e-16
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = -2
Query: 198 SLKHFRGQKHIDRMLARWAAYLERFNYVIVHKSGVTNRVADALSRRATLLVTISTEVPGF 19
SLKH R Q ++R A+W ++E F YVI HK G N +ADALSRR TLL + ++ G
Sbjct: 900 SLKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENIIADALSRRYTLLTQLDYKIFGL 959
Query: 18 EQLKE 4
E +K+
Sbjct: 960 ETIKD 964
Score = 43.1 bits (100), Expect(3) = 1e-16
Identities = 17/32 (53%), Positives = 24/32 (75%)
Frame = -1
Query: 424 FQWGEAADRSFELIKDKLSTAPVLSLPDFAKT 329
F WG + + +F ++KDKL+ AP+L LPDF KT
Sbjct: 798 FTWGTSQENAFHMLKDKLTHAPLLQLPDFNKT 829
Score = 23.5 bits (49), Expect(3) = 1e-16
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 329 IAFFSEKLSDARQKWSTY 276
+A+FSEKLS +STY
Sbjct: 852 VAYFSEKLSGPVLNYSTY 869