BLASTX nr result
ID: Sinomenium22_contig00013271
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00013271
(370 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279657.2| PREDICTED: 50S ribosomal protein L6, chlorop... 175 7e-42
ref|XP_002320459.1| ribosomal protein L6 [Populus trichocarpa] g... 167 1e-39
ref|XP_007045631.1| Ribosomal protein L6 family [Theobroma cacao... 158 8e-37
ref|XP_004514093.1| PREDICTED: 50S ribosomal protein L6, chlorop... 157 2e-36
gb|AFK43716.1| unknown [Medicago truncatula] 155 5e-36
ref|XP_007223925.1| hypothetical protein PRUPE_ppa011034mg [Prun... 155 7e-36
ref|XP_006447548.1| hypothetical protein CICLE_v10016578mg [Citr... 154 1e-35
gb|EXB83377.1| 50S ribosomal protein L6 [Morus notabilis] 153 3e-35
ref|XP_004287942.1| PREDICTED: 50S ribosomal protein L6, chlorop... 153 3e-35
ref|XP_003548187.1| PREDICTED: 50S ribosomal protein L6, chlorop... 152 5e-35
gb|ACU23468.1| unknown [Glycine max] 152 5e-35
ref|XP_006418054.1| hypothetical protein EUTSA_v10008693mg [Eutr... 152 6e-35
ref|XP_006858065.1| hypothetical protein AMTR_s00062p00057610 [A... 150 2e-34
ref|XP_003534001.1| PREDICTED: 50S ribosomal protein L6, chlorop... 148 9e-34
ref|XP_004252860.1| PREDICTED: 50S ribosomal protein L6, chlorop... 147 1e-33
gb|ACU19091.1| unknown [Glycine max] 147 2e-33
ref|XP_006365808.1| PREDICTED: 50S ribosomal protein L6, chlorop... 145 4e-33
ref|XP_007152280.1| hypothetical protein PHAVU_004G116200g [Phas... 145 7e-33
ref|XP_006304184.1| hypothetical protein CARUB_v10010237mg [Caps... 144 1e-32
ref|NP_172011.1| 50S ribosomal protein L6 [Arabidopsis thaliana]... 144 1e-32
>ref|XP_002279657.2| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Vitis
vinifera] gi|297739290|emb|CBI28941.3| unnamed protein
product [Vitis vinifera]
Length = 226
Score = 175 bits (443), Expect = 7e-42
Identities = 87/115 (75%), Positives = 101/115 (87%)
Frame = +1
Query: 25 MASSLTCSFQSCNLKSEFIGKRSVIHTANVPVTLIGFLRKKVECKESRIGKRPIEVPSNV 204
MASS+T SFQ+ NL+S F+G+R+ I+ ++VPVT +GFLRK +ECKESRIGK+PIEVPSNV
Sbjct: 1 MASSITPSFQTSNLRSAFLGERNGIYVSSVPVTRVGFLRKTIECKESRIGKKPIEVPSNV 60
Query: 205 TIILEGQDLKVKGPLGELSRTFPREVKVDKLETGHLKVNKALETRRANQMHGLFR 369
TI LEGQDLKVKGPLGELSRT+PREVKV K E+G L V KA ETRRANQMHGLFR
Sbjct: 61 TITLEGQDLKVKGPLGELSRTYPREVKVQKDESGILTVKKAFETRRANQMHGLFR 115
>ref|XP_002320459.1| ribosomal protein L6 [Populus trichocarpa]
gi|222861232|gb|EEE98774.1| ribosomal protein L6
[Populus trichocarpa]
Length = 227
Score = 167 bits (423), Expect = 1e-39
Identities = 83/114 (72%), Positives = 100/114 (87%)
Frame = +1
Query: 28 ASSLTCSFQSCNLKSEFIGKRSVIHTANVPVTLIGFLRKKVECKESRIGKRPIEVPSNVT 207
+SS+T SFQ+ NL+S F+G+R+ I +VPVT IGFLRK +ECKESRIGK+PI+VPSNVT
Sbjct: 3 SSSITSSFQTSNLRSVFLGERNRICVPSVPVTRIGFLRKAIECKESRIGKQPIQVPSNVT 62
Query: 208 IILEGQDLKVKGPLGELSRTFPREVKVDKLETGHLKVNKALETRRANQMHGLFR 369
I LEGQDLKVKGPLGELSRT+PREVK+++ E G ++V KALETRRANQMHGLFR
Sbjct: 63 IKLEGQDLKVKGPLGELSRTYPREVKLERDEDGIIRVKKALETRRANQMHGLFR 116
>ref|XP_007045631.1| Ribosomal protein L6 family [Theobroma cacao]
gi|508709566|gb|EOY01463.1| Ribosomal protein L6 family
[Theobroma cacao]
Length = 225
Score = 158 bits (399), Expect = 8e-37
Identities = 79/115 (68%), Positives = 98/115 (85%)
Frame = +1
Query: 25 MASSLTCSFQSCNLKSEFIGKRSVIHTANVPVTLIGFLRKKVECKESRIGKRPIEVPSNV 204
MASS+ SFQ+ NL+S F+G+R+ I +++PVT + +RK VECKESRIGK+PI+VPSNV
Sbjct: 1 MASSII-SFQTSNLRSAFLGERNAICISSIPVTRVSLVRKAVECKESRIGKQPIQVPSNV 59
Query: 205 TIILEGQDLKVKGPLGELSRTFPREVKVDKLETGHLKVNKALETRRANQMHGLFR 369
TI LEGQD+KVKGPLGEL+ T+PREVKVD+ E G L+V KA+ETRRANQMHGLFR
Sbjct: 60 TITLEGQDVKVKGPLGELALTYPREVKVDREEPGILRVRKAVETRRANQMHGLFR 114
>ref|XP_004514093.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Cicer
arietinum]
Length = 226
Score = 157 bits (396), Expect = 2e-36
Identities = 77/115 (66%), Positives = 94/115 (81%)
Frame = +1
Query: 25 MASSLTCSFQSCNLKSEFIGKRSVIHTANVPVTLIGFLRKKVECKESRIGKRPIEVPSNV 204
MASS+T SFQ N KS ++G+RS + ++ P T +G RK ECKESRIGK+PI VPSNV
Sbjct: 1 MASSVTSSFQISNFKSVYLGERSKLRVSSAPATRVGVFRKTTECKESRIGKQPIPVPSNV 60
Query: 205 TIILEGQDLKVKGPLGELSRTFPREVKVDKLETGHLKVNKALETRRANQMHGLFR 369
TI LEGQD++VKGPLGELS T+PREVKV++ + G LKV+KA+ETRRANQMHGLFR
Sbjct: 61 TIKLEGQDIQVKGPLGELSLTYPREVKVERQDEGILKVSKAVETRRANQMHGLFR 115
>gb|AFK43716.1| unknown [Medicago truncatula]
Length = 226
Score = 155 bits (392), Expect = 5e-36
Identities = 78/115 (67%), Positives = 91/115 (79%)
Frame = +1
Query: 25 MASSLTCSFQSCNLKSEFIGKRSVIHTANVPVTLIGFLRKKVECKESRIGKRPIEVPSNV 204
MASS+T SFQ N KS F+G+RS I ++ P T +GF RK ECKESRIGK+PI VPSNV
Sbjct: 1 MASSVTSSFQLSNFKSSFVGERSRIRISSAPATHVGFFRKTTECKESRIGKQPIPVPSNV 60
Query: 205 TIILEGQDLKVKGPLGELSRTFPREVKVDKLETGHLKVNKALETRRANQMHGLFR 369
TI +EGQ KGPLGELS T+PREVKV++ E G LKV+KA+ETRRANQMHGLFR
Sbjct: 61 TIKMEGQYFHAKGPLGELSLTYPREVKVERQEEGVLKVSKAVETRRANQMHGLFR 115
>ref|XP_007223925.1| hypothetical protein PRUPE_ppa011034mg [Prunus persica]
gi|462420861|gb|EMJ25124.1| hypothetical protein
PRUPE_ppa011034mg [Prunus persica]
Length = 226
Score = 155 bits (391), Expect = 7e-36
Identities = 77/115 (66%), Positives = 95/115 (82%)
Frame = +1
Query: 25 MASSLTCSFQSCNLKSEFIGKRSVIHTANVPVTLIGFLRKKVECKESRIGKRPIEVPSNV 204
MASS+T S Q+ NL+S F+G+R+ +V VT +GFL+K +ECKESRIGK+PIEVPSNV
Sbjct: 1 MASSITSSLQTSNLRSAFLGERNGFSVCSVSVTHVGFLKKTIECKESRIGKQPIEVPSNV 60
Query: 205 TIILEGQDLKVKGPLGELSRTFPREVKVDKLETGHLKVNKALETRRANQMHGLFR 369
+I LEGQ L+VKGPLG+LS T+PREV V K ++G L+V KALETRRANQMHGLFR
Sbjct: 61 SIKLEGQALEVKGPLGQLSMTYPREVLVQKEDSGFLRVRKALETRRANQMHGLFR 115
>ref|XP_006447548.1| hypothetical protein CICLE_v10016578mg [Citrus clementina]
gi|568830833|ref|XP_006469689.1| PREDICTED: 50S
ribosomal protein L6, chloroplastic-like [Citrus
sinensis] gi|557550159|gb|ESR60788.1| hypothetical
protein CICLE_v10016578mg [Citrus clementina]
Length = 225
Score = 154 bits (389), Expect = 1e-35
Identities = 79/115 (68%), Positives = 91/115 (79%)
Frame = +1
Query: 25 MASSLTCSFQSCNLKSEFIGKRSVIHTANVPVTLIGFLRKKVECKESRIGKRPIEVPSNV 204
MASS+ SF + NLKS F G+R+ +NVPV +GF RK +ECKESRIGK+PIEVPSNV
Sbjct: 1 MASSIASSFHTSNLKSIFFGERNGFSMSNVPVNRVGFSRKTIECKESRIGKQPIEVPSNV 60
Query: 205 TIILEGQDLKVKGPLGELSRTFPREVKVDKLETGHLKVNKALETRRANQMHGLFR 369
TI L GQDLKVKGPLGELS +PREVKVD+ E L+V K +ETRRANQMHGLFR
Sbjct: 61 TITLGGQDLKVKGPLGELSLVYPREVKVDR-EDSFLRVRKTVETRRANQMHGLFR 114
>gb|EXB83377.1| 50S ribosomal protein L6 [Morus notabilis]
Length = 225
Score = 153 bits (386), Expect = 3e-35
Identities = 77/115 (66%), Positives = 97/115 (84%)
Frame = +1
Query: 25 MASSLTCSFQSCNLKSEFIGKRSVIHTANVPVTLIGFLRKKVECKESRIGKRPIEVPSNV 204
MASSLT SFQ+ + +S F+G+R+ ++VPV+ +GF++K +ECKESRIGK+ IEVPSNV
Sbjct: 1 MASSLTSSFQT-SFRSVFLGERNGFSVSSVPVSRVGFVKKNIECKESRIGKQAIEVPSNV 59
Query: 205 TIILEGQDLKVKGPLGELSRTFPREVKVDKLETGHLKVNKALETRRANQMHGLFR 369
TI LEGQ LKVKGPLGELS +PREVKV++ E+G L+V KA+ETRRANQMHGLFR
Sbjct: 60 TITLEGQGLKVKGPLGELSLNYPREVKVEREESGILRVRKAVETRRANQMHGLFR 114
>ref|XP_004287942.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 226
Score = 153 bits (386), Expect = 3e-35
Identities = 76/115 (66%), Positives = 92/115 (80%)
Frame = +1
Query: 25 MASSLTCSFQSCNLKSEFIGKRSVIHTANVPVTLIGFLRKKVECKESRIGKRPIEVPSNV 204
MAS +T SFQ+ NL+S F+G+R + P T +GFL+K VECKESRIGK+PIEVP+NV
Sbjct: 1 MASPITSSFQTSNLRSAFLGERKGFTVYSAPATNVGFLKKAVECKESRIGKQPIEVPANV 60
Query: 205 TIILEGQDLKVKGPLGELSRTFPREVKVDKLETGHLKVNKALETRRANQMHGLFR 369
T+ LEGQ L+VKGPLG+LS PREV V+K E+G LKV KA+ETRRANQMHGLFR
Sbjct: 61 TLKLEGQSLEVKGPLGQLSMILPREVVVEKQESGVLKVRKAMETRRANQMHGLFR 115
>ref|XP_003548187.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like isoform 1
[Glycine max]
Length = 226
Score = 152 bits (384), Expect = 5e-35
Identities = 75/115 (65%), Positives = 95/115 (82%)
Frame = +1
Query: 25 MASSLTCSFQSCNLKSEFIGKRSVIHTANVPVTLIGFLRKKVECKESRIGKRPIEVPSNV 204
MASS+T SF+ NLKS F+G+ + + ++VP +GF RK VECKESRIGK+PI VPSNV
Sbjct: 1 MASSVTSSFRISNLKSVFVGETNKLRVSSVPGAHVGFNRKTVECKESRIGKQPIPVPSNV 60
Query: 205 TIILEGQDLKVKGPLGELSRTFPREVKVDKLETGHLKVNKALETRRANQMHGLFR 369
T+ LEGQD++VKGPLGEL+ T+PREV V++ E+G L+V KA+ETRRANQMHGLFR
Sbjct: 61 TVKLEGQDIQVKGPLGELALTYPREVLVEREESGTLRVKKAVETRRANQMHGLFR 115
>gb|ACU23468.1| unknown [Glycine max]
Length = 226
Score = 152 bits (384), Expect = 5e-35
Identities = 75/115 (65%), Positives = 95/115 (82%)
Frame = +1
Query: 25 MASSLTCSFQSCNLKSEFIGKRSVIHTANVPVTLIGFLRKKVECKESRIGKRPIEVPSNV 204
MASS+T SF+ NLKS F+G+ + + ++VP +GF RK VECKESRIGK+PI VPSNV
Sbjct: 1 MASSVTSSFRISNLKSVFVGETNKLRVSSVPGAHVGFNRKTVECKESRIGKQPIPVPSNV 60
Query: 205 TIILEGQDLKVKGPLGELSRTFPREVKVDKLETGHLKVNKALETRRANQMHGLFR 369
T+ LEGQD++VKGPLGEL+ T+PREV V++ E+G L+V KA+ETRRANQMHGLFR
Sbjct: 61 TVKLEGQDIQVKGPLGELALTYPREVLVEREESGTLRVKKAVETRRANQMHGLFR 115
>ref|XP_006418054.1| hypothetical protein EUTSA_v10008693mg [Eutrema salsugineum]
gi|557095825|gb|ESQ36407.1| hypothetical protein
EUTSA_v10008693mg [Eutrema salsugineum]
Length = 226
Score = 152 bits (383), Expect = 6e-35
Identities = 74/115 (64%), Positives = 90/115 (78%)
Frame = +1
Query: 25 MASSLTCSFQSCNLKSEFIGKRSVIHTANVPVTLIGFLRKKVECKESRIGKRPIEVPSNV 204
MASSL SFQ N++S F+G R+V + P +GF K +ECKESRIGK+PI VPSNV
Sbjct: 1 MASSLVSSFQPSNVRSAFLGDRNVFKVSTTPFAQVGFSSKTIECKESRIGKQPIAVPSNV 60
Query: 205 TIILEGQDLKVKGPLGELSRTFPREVKVDKLETGHLKVNKALETRRANQMHGLFR 369
TI LEGQDLKVKGPLGEL+ T+PREV++ K ++G L+V K +ETRRANQMHGLFR
Sbjct: 61 TIALEGQDLKVKGPLGELALTYPREVELTKEDSGFLRVKKTVETRRANQMHGLFR 115
>ref|XP_006858065.1| hypothetical protein AMTR_s00062p00057610 [Amborella trichopoda]
gi|548862168|gb|ERN19532.1| hypothetical protein
AMTR_s00062p00057610 [Amborella trichopoda]
Length = 225
Score = 150 bits (378), Expect = 2e-34
Identities = 80/114 (70%), Positives = 94/114 (82%), Gaps = 1/114 (0%)
Frame = +1
Query: 31 SSLTCSFQSCNLKSEFIG-KRSVIHTANVPVTLIGFLRKKVECKESRIGKRPIEVPSNVT 207
+SLT QS LKS+F G K +HT++ PV IGF RK VECKESR+GK PIEVPS+VT
Sbjct: 2 ASLTFFCQSIPLKSKFWGEKNGRVHTSS-PVIGIGFFRKNVECKESRVGKHPIEVPSSVT 60
Query: 208 IILEGQDLKVKGPLGELSRTFPREVKVDKLETGHLKVNKALETRRANQMHGLFR 369
I L+GQDLKVKGPLGELSRT+PREVKV++L+ LKV+KAL+TRRANQMHGLFR
Sbjct: 61 ITLDGQDLKVKGPLGELSRTYPREVKVERLDPTTLKVSKALDTRRANQMHGLFR 114
>ref|XP_003534001.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Glycine
max]
Length = 226
Score = 148 bits (373), Expect = 9e-34
Identities = 72/115 (62%), Positives = 92/115 (80%)
Frame = +1
Query: 25 MASSLTCSFQSCNLKSEFIGKRSVIHTANVPVTLIGFLRKKVECKESRIGKRPIEVPSNV 204
M SS+T SF+ NL S F+G+ + + VP +GF+RK VECKESRIGK+PI VPSNV
Sbjct: 1 MTSSVTSSFRISNLNSVFVGETNKFRVSTVPGAHVGFIRKTVECKESRIGKQPIPVPSNV 60
Query: 205 TIILEGQDLKVKGPLGELSRTFPREVKVDKLETGHLKVNKALETRRANQMHGLFR 369
T+ LEGQD++VKGPLGEL+ ++PREV V++ E+G L+V KA+ETRRANQMHGLFR
Sbjct: 61 TVKLEGQDIQVKGPLGELALSYPREVLVEREESGTLRVKKAVETRRANQMHGLFR 115
>ref|XP_004252860.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Solanum
lycopersicum]
Length = 257
Score = 147 bits (372), Expect = 1e-33
Identities = 71/114 (62%), Positives = 91/114 (79%)
Frame = +1
Query: 28 ASSLTCSFQSCNLKSEFIGKRSVIHTANVPVTLIGFLRKKVECKESRIGKRPIEVPSNVT 207
+SSLT S + L+S F+G + H ++V V +GF+ K VECKESRIGK+PI VPSNVT
Sbjct: 33 SSSLTASLHASTLRSPFVGSLNGFHVSSVAVRRVGFVSKTVECKESRIGKQPISVPSNVT 92
Query: 208 IILEGQDLKVKGPLGELSRTFPREVKVDKLETGHLKVNKALETRRANQMHGLFR 369
+ +EGQDLKVKGPLGE++ T+PREVK++K + G L+V KA+ETRRANQMHGLFR
Sbjct: 93 LTMEGQDLKVKGPLGEMAITYPREVKLEKEDGGILRVRKAMETRRANQMHGLFR 146
>gb|ACU19091.1| unknown [Glycine max]
Length = 226
Score = 147 bits (370), Expect = 2e-33
Identities = 72/115 (62%), Positives = 91/115 (79%)
Frame = +1
Query: 25 MASSLTCSFQSCNLKSEFIGKRSVIHTANVPVTLIGFLRKKVECKESRIGKRPIEVPSNV 204
M SS+T SF+ NL S F+G+ + + VP +GF+RK VECKESRIGK+PI VPSNV
Sbjct: 1 MTSSVTSSFRISNLNSVFVGETNKFRVSTVPGAHVGFIRKTVECKESRIGKQPIPVPSNV 60
Query: 205 TIILEGQDLKVKGPLGELSRTFPREVKVDKLETGHLKVNKALETRRANQMHGLFR 369
T+ LEGQD++VKGPLGEL+ ++PREV V + E+G L+V KA+ETRRANQMHGLFR
Sbjct: 61 TVKLEGQDIQVKGPLGELALSYPREVLVKREESGTLRVKKAVETRRANQMHGLFR 115
>ref|XP_006365808.1| PREDICTED: 50S ribosomal protein L6, chloroplastic-like [Solanum
tuberosum]
Length = 227
Score = 145 bits (367), Expect = 4e-33
Identities = 70/114 (61%), Positives = 91/114 (79%)
Frame = +1
Query: 28 ASSLTCSFQSCNLKSEFIGKRSVIHTANVPVTLIGFLRKKVECKESRIGKRPIEVPSNVT 207
+SSLT S + L+S F+G + ++V V +GF+RK +ECKESRIGK+PI VPSNVT
Sbjct: 3 SSSLTASLHTSTLRSPFVGNLNGFRVSSVAVRRVGFVRKMIECKESRIGKQPISVPSNVT 62
Query: 208 IILEGQDLKVKGPLGELSRTFPREVKVDKLETGHLKVNKALETRRANQMHGLFR 369
+ +EGQDLKVKGPLGE++ T+PREVK++K + G L+V KA+ETRRANQMHGLFR
Sbjct: 63 LTMEGQDLKVKGPLGEMAITYPREVKLEKDDGGILRVRKAVETRRANQMHGLFR 116
>ref|XP_007152280.1| hypothetical protein PHAVU_004G116200g [Phaseolus vulgaris]
gi|561025589|gb|ESW24274.1| hypothetical protein
PHAVU_004G116200g [Phaseolus vulgaris]
Length = 226
Score = 145 bits (365), Expect = 7e-33
Identities = 72/115 (62%), Positives = 92/115 (80%)
Frame = +1
Query: 25 MASSLTCSFQSCNLKSEFIGKRSVIHTANVPVTLIGFLRKKVECKESRIGKRPIEVPSNV 204
MASS+T SF+ NLK+ F+G+ + + ++VP GF+RK VECKESRIGK+ I VP+NV
Sbjct: 1 MASSVTSSFRISNLKTVFVGETNKLRVSSVPGAQAGFVRKTVECKESRIGKQRITVPTNV 60
Query: 205 TIILEGQDLKVKGPLGELSRTFPREVKVDKLETGHLKVNKALETRRANQMHGLFR 369
T+ LEGQ ++VKGPLGEL+ T+PREV V+K E G L+V KA+ETRRANQMHGLFR
Sbjct: 61 TVKLEGQGIQVKGPLGELALTYPREVLVEKEEAGTLRVRKAVETRRANQMHGLFR 115
>ref|XP_006304184.1| hypothetical protein CARUB_v10010237mg [Capsella rubella]
gi|482572895|gb|EOA37082.1| hypothetical protein
CARUB_v10010237mg [Capsella rubella]
Length = 223
Score = 144 bits (364), Expect = 1e-32
Identities = 73/115 (63%), Positives = 89/115 (77%)
Frame = +1
Query: 25 MASSLTCSFQSCNLKSEFIGKRSVIHTANVPVTLIGFLRKKVECKESRIGKRPIEVPSNV 204
MASSL SFQ +S F+G R+V ++ P +GF K +ECKESRIGK+PI VPSNV
Sbjct: 1 MASSLVSSFQP---RSAFLGDRNVFKVSSTPFAQVGFSSKTIECKESRIGKQPIAVPSNV 57
Query: 205 TIILEGQDLKVKGPLGELSRTFPREVKVDKLETGHLKVNKALETRRANQMHGLFR 369
TI LEGQDLKVKGPLGEL+ T+PREV++ K ++G L+V K +ETRRANQMHGLFR
Sbjct: 58 TIALEGQDLKVKGPLGELALTYPREVELTKEDSGFLRVKKTVETRRANQMHGLFR 112
>ref|NP_172011.1| 50S ribosomal protein L6 [Arabidopsis thaliana]
gi|75277355|sp|O23049.1|RK6_ARATH RecName: Full=50S
ribosomal protein L6, chloroplastic; AltName:
Full=Protein EMBRYO DEFECTIVE 2394; Flags: Precursor
gi|189096131|pdb|3BBO|I Chain I, Homology Model For The
Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em
Map Of The 70s Chlororibosome
gi|13430706|gb|AAK25975.1|AF360265_1 putative
chloroplast 50S ribosomal protein L6 [Arabidopsis
thaliana] gi|2388578|gb|AAB71459.1| Similar to
Mycobacterium RlpF (gb|Z84395). ESTs
gb|T75785,gb|R30580,gb|T04698 come from this gene
[Arabidopsis thaliana] gi|14532906|gb|AAK64135.1|
putative chloroplast 50S ribosomal protein L6
[Arabidopsis thaliana] gi|21553840|gb|AAM62933.1|
putative chloroplast 50S ribosomal protein L6
[Arabidopsis thaliana] gi|332189681|gb|AEE27802.1| 50S
ribosomal protein L6 [Arabidopsis thaliana]
Length = 223
Score = 144 bits (364), Expect = 1e-32
Identities = 73/115 (63%), Positives = 89/115 (77%)
Frame = +1
Query: 25 MASSLTCSFQSCNLKSEFIGKRSVIHTANVPVTLIGFLRKKVECKESRIGKRPIEVPSNV 204
MASSL SFQ +S F+G R+V ++ P +G+ K +ECKESRIGK+PI VPSNV
Sbjct: 1 MASSLVSSFQP---RSAFLGDRNVFKVSSTPFAQVGYSSKTIECKESRIGKQPIAVPSNV 57
Query: 205 TIILEGQDLKVKGPLGELSRTFPREVKVDKLETGHLKVNKALETRRANQMHGLFR 369
TI LEGQDLKVKGPLGEL+ T+PREV++ K E+G L+V K +ETRRANQMHGLFR
Sbjct: 58 TIALEGQDLKVKGPLGELALTYPREVELTKEESGFLRVKKTVETRRANQMHGLFR 112