BLASTX nr result
ID: Sinomenium22_contig00013142
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00013142
(3982 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEJ72569.1| putative reverse transcriptase family member [Mal... 55 2e-09
gb|ABB00038.1| reverse transcriptase family member [Glycine max] 58 8e-08
gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic... 54 2e-07
gb|EMS50104.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic... 53 3e-07
gb|EMS62958.1| Putative SWI/SNF-related matrix-associated actin-... 53 8e-07
emb|CCH50976.1| T4.15 [Malus x robusta] 51 8e-07
ref|NP_001183823.1| uncharacterized protein LOC100502416 [Zea ma... 52 1e-06
gb|EMT05937.1| GPI ethanolamine phosphate transferase 1 [Aegilop... 50 8e-06
>gb|AEJ72569.1| putative reverse transcriptase family member [Malus domestica]
Length = 212
Score = 55.5 bits (132), Expect(2) = 2e-09
Identities = 47/115 (40%), Positives = 60/115 (52%), Gaps = 3/115 (2%)
Frame = -3
Query: 1811 LLFSQPCF-VEYNVVNEETICSKLSVMEV*MLRSLCGET*KGTSRNE*IQETI*VATIEN 1635
+L+ C+ V+Y V+ K+ V E+ MLR +CG T K RNE I+ + VA IE
Sbjct: 80 MLYGTECWAVKYQHVH------KMGVAEMRMLRWMCGHTRKDKIRNEDIRGKVGVAEIEG 133
Query: 1634 NMGENCLRWFGH--RTHTTRIIRCID*EE*HNTVSGIDKGR*ISEITWVEIVKKD 1476
NM EN LRWFGH R T IR D E V G +GR T E ++KD
Sbjct: 134 NMRENRLRWFGHVQRRPTYAPIRRCDYE---TEVQG-RRGRGRPRKTLEETLRKD 184
Score = 37.0 bits (84), Expect(2) = 2e-09
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = -2
Query: 1902 IEVVWVKWRSNLRILYE*CILLKL*GKFCEIVI*PAML 1789
I+ W+KW+S +L + C+ LKL GKF I PAML
Sbjct: 44 IQAGWMKWKSASGVLCDRCMPLKLKGKFYRTTIRPAML 81
>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
Length = 377
Score = 58.2 bits (139), Expect(2) = 8e-08
Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 2/94 (2%)
Frame = -3
Query: 1751 SKLSVMEV*MLRSLCGET*KGTSRNE*IQETI*VATIENNMGENCLRWFGH--RTHTTRI 1578
+K+ V E+ MLR +CG+T + RNE I+E + VA I M EN LRWFGH R +
Sbjct: 261 NKVGVAEMRMLRWMCGKTRQDKIRNEAIRERVGVAPIVEKMVENRLRWFGHVERRPVDSV 320
Query: 1577 IRCID*EE*HNTVSGIDKGR*ISEITWVEIVKKD 1476
+R +D E T+ G +GR + T E++KKD
Sbjct: 321 LRRVDQMERRQTIRG--RGR--PKKTIREVIKKD 350
Score = 28.5 bits (62), Expect(2) = 8e-08
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2
Query: 1902 IEVVWVKWRSNLRILYE*CILLKL*GKFCEIVI*PAML 1789
I+ W+KWR +L + + +KL GKF + P +L
Sbjct: 210 IQAGWMKWRKASGVLCDAKVPIKLKGKFYRTAVRPTIL 247
>gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
Length = 882
Score = 53.9 bits (128), Expect(2) = 2e-07
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Frame = -3
Query: 1748 KLSVMEV*MLRSLCGET*KGTSRNE*IQETI*VATIENNMGENCLRWFGH--------RT 1593
+L V E+ MLR +CG T K RN+ I++ + VA IE + ++ LRWFGH
Sbjct: 401 QLDVAEMCMLRCMCGHTRKDRVRNDDIRDRVGVAPIEEKLVQHRLRWFGHIQHRPPEAPV 460
Query: 1592 HTTRIIRCID*EE*HNTVSGIDKGR*ISEITWVEIVKKD 1476
H+ R+ R + +GR +TW E VK+D
Sbjct: 461 HSGRLKR----------AENVKRGRGRPNLTWEESVKRD 489
Score = 31.6 bits (70), Expect(2) = 2e-07
Identities = 17/38 (44%), Positives = 22/38 (57%)
Frame = -2
Query: 1902 IEVVWVKWRSNLRILYE*CILLKL*GKFCEIVI*PAML 1789
I+ W+KWR IL + + KL GKF V+ PAML
Sbjct: 349 IKAGWMKWRQASGILCDKRVPQKLKGKFYRTVVRPAML 386
>gb|EMS50104.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
Length = 3154
Score = 53.1 bits (126), Expect(2) = 3e-07
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Frame = -3
Query: 1748 KLSVMEV*MLRSLCGET*KGTSRNE*IQETI*VATIENNMGENCLRWFGH--------RT 1593
+L V E+ MLR +CG T K RN+ I++ + VA IE + ++ LRWFGH
Sbjct: 2367 QLGVAEMRMLRWMCGHTRKDRVRNDDIRDRVGVAPIEEKLVQHRLRWFGHIQRRPPEAPV 2426
Query: 1592 HTTRIIRCID*EE*HNTVSGIDKGR*ISEITWVEIVKKD 1476
H+ R+ R + +GR +TW E VK+D
Sbjct: 2427 HSGRLKR----------AENVKRGRGRPNLTWEESVKRD 2455
Score = 31.6 bits (70), Expect(2) = 3e-07
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = -2
Query: 1902 IEVVWVKWRSNLRILYE*CILLKL*GKFCEIVI*PAMLCRI*C 1774
I+ W+KWR IL + + KL GKF + PAML + C
Sbjct: 2315 IKAGWMKWRQASGILCDKKVPQKLNGKFYRTAVRPAMLYGVEC 2357
>gb|EMS62958.1| Putative SWI/SNF-related matrix-associated actin-dependent regulator
of chromatin subfamily A member 3-like 1 [Triticum
urartu]
Length = 1028
Score = 53.1 bits (126), Expect(2) = 8e-07
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Frame = -3
Query: 1748 KLSVMEV*MLRSLCGET*KGTSRNE*IQETI*VATIENNMGENCLRWFGH--------RT 1593
+L V E+ MLR +CG T K RN+ I++ + VA IE + ++ LRWFGH
Sbjct: 653 QLGVAEMRMLRWMCGHTRKDRVRNDDIRDRVGVAPIEEKLVQHRLRWFGHIQRRPPEAPV 712
Query: 1592 HTTRIIRCID*EE*HNTVSGIDKGR*ISEITWVEIVKKD 1476
H+ R+ R + +GR +TW E VK+D
Sbjct: 713 HSGRLKR----------AENVKRGRGRPNLTWEESVKRD 741
Score = 30.0 bits (66), Expect(2) = 8e-07
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -2
Query: 1902 IEVVWVKWRSNLRILYE*CILLKL*GKFCEIVI*PAML 1789
I+ W+KWR IL + + KL GKF + PAML
Sbjct: 601 IKAGWMKWRQASGILCDKRVPQKLKGKFYRTAVRPAML 638
>emb|CCH50976.1| T4.15 [Malus x robusta]
Length = 986
Score = 50.8 bits (120), Expect(2) = 8e-07
Identities = 38/93 (40%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = -3
Query: 1748 KLSVMEV*MLRSLCGET*KGTSRNE*IQETI*VATIENNMGENCLRWFGH--RTHTTRII 1575
K+ V E+ MLR +CG T K RNE I+ + VA I+ M EN LRWFGH R T I
Sbjct: 870 KMGVAEMRMLRWMCGHTRKDKIRNEDIRGKVGVAEIQGKMRENQLRWFGHVQRRPTDAPI 929
Query: 1574 RCID*EE*HNTVSGIDKGR*ISEITWVEIVKKD 1476
R D + T +GR T E ++KD
Sbjct: 930 RRCD----YGTEVQGRRGRGRPRKTLEETLRKD 958
Score = 32.3 bits (72), Expect(2) = 8e-07
Identities = 17/38 (44%), Positives = 23/38 (60%)
Frame = -2
Query: 1902 IEVVWVKWRSNLRILYE*CILLKL*GKFCEIVI*PAML 1789
I+ W+KW+S +L + + LKL GKF I PAML
Sbjct: 818 IQAGWMKWKSASGVLCDRRMPLKLKGKFYRTAIRPAML 855
>ref|NP_001183823.1| uncharacterized protein LOC100502416 [Zea mays]
gi|238014750|gb|ACR38410.1| unknown [Zea mays]
Length = 215
Score = 52.4 bits (124), Expect(2) = 1e-06
Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Frame = -3
Query: 1748 KLSVMEV*MLRSLCGET*KGTSRNE*IQETI*VATIENNMGENCLRWFGHRTHTTRIIRC 1569
+L V E+ MLR +CG T + RN+ I+E + VA IE + ++ LRWFGH I R
Sbjct: 101 QLCVAEMRMLRWICGHTRRDRVRNDDIRERVGVAPIEEKLMQHRLRWFGH------IQRR 154
Query: 1568 ID*EE*HNTV----SGIDKGR*ISEITWVEIVKKD 1476
D H + + +GR +TW E VK+D
Sbjct: 155 SDEAPVHIGIIRRPENVKRGRGRPTLTWTEAVKRD 189
Score = 30.0 bits (66), Expect(2) = 1e-06
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -2
Query: 1902 IEVVWVKWRSNLRILYE*CILLKL*GKFCEIVI*PAML 1789
I+ W+KWR +L + + KL GKF I PAML
Sbjct: 49 IKAGWLKWRQAAGVLCDPRVPHKLKGKFYRTAIRPAML 86
>gb|EMT05937.1| GPI ethanolamine phosphate transferase 1 [Aegilops tauschii]
Length = 1013
Score = 49.7 bits (117), Expect(2) = 8e-06
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Frame = -3
Query: 1748 KLSVMEV*MLRSLCGET*KGTSRNE*IQETI*VATIENNMGENCLRWFGH--------RT 1593
+L V E+ MLR +CG T K RN+ I++ + VA IE + ++ LRWFGH
Sbjct: 184 QLGVAEMRMLRWMCGHTRKDRVRNDDIRDRVGVAPIEEKLVQHRLRWFGHIQRRPPEAPV 243
Query: 1592 HTTRIIRCID*EE*HNTVSGIDKGR*ISEITWVEIVKKD 1476
H+ + R + +GR +TW E VK+D
Sbjct: 244 HSGWLKR----------AENVKRGRGRLNLTWEESVKRD 272
Score = 30.0 bits (66), Expect(2) = 8e-06
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = -2
Query: 1902 IEVVWVKWRSNLRILYE*CILLKL*GKFCEIVI*PAML 1789
I+ W+KWR IL + + KL GKF + PAML
Sbjct: 132 IKAGWMKWRQASGILCDKRVPQKLKGKFYRTAVRPAML 169