BLASTX nr result

ID: Sinomenium22_contig00012334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00012334
         (598 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding...    67   5e-09
emb|CAN76895.1| hypothetical protein VITISV_009954 [Vitis vinifera]    59   1e-06

>ref|XP_002275100.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Vitis
           vinifera]
          Length = 1764

 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 32/56 (57%), Positives = 40/56 (71%)
 Frame = -3

Query: 170 MAFFRDYSNGMDSDNALDEKGQDHSADRLHKSVENVDVDGSSSDKDIELKLDDQYQ 3
           MAFFR+YSN   + + LDEKGQ  + DR+H SV N  VD +SS+KD E K+D QYQ
Sbjct: 1   MAFFRNYSNETVAQSVLDEKGQGQNIDRVHSSVANEYVDATSSEKDFESKVDGQYQ 56


>emb|CAN76895.1| hypothetical protein VITISV_009954 [Vitis vinifera]
          Length = 626

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 28/52 (53%), Positives = 36/52 (69%)
 Frame = -3

Query: 158 RDYSNGMDSDNALDEKGQDHSADRLHKSVENVDVDGSSSDKDIELKLDDQYQ 3
           R+YSN   + + LDEKGQ  + DR+H SV N  VD +SS+KD E K+D QYQ
Sbjct: 46  RNYSNETVAQSVLDEKGQGQNIDRVHSSVANEYVDATSSEKDFESKVDGQYQ 97


Top