BLASTX nr result
ID: Sinomenium22_contig00011987
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00011987
(921 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248... 73 2e-10
ref|XP_006485663.1| PREDICTED: heterogeneous nuclear ribonucleop... 72 2e-10
ref|XP_006451727.1| hypothetical protein CICLE_v10008394mg [Citr... 72 2e-10
ref|XP_006582133.1| PREDICTED: heterogeneous nuclear ribonucleop... 70 1e-09
ref|XP_007021676.1| RNA-binding family protein [Theobroma cacao]... 69 2e-09
ref|XP_004137219.1| PREDICTED: uncharacterized protein LOC101207... 69 2e-09
ref|XP_007211635.1| hypothetical protein PRUPE_ppa005857mg [Prun... 69 3e-09
ref|NP_188119.1| RNA recognition motif-containing protein [Arabi... 68 6e-09
ref|XP_007133193.1| hypothetical protein PHAVU_011G159400g [Phas... 68 6e-09
gb|AGV54510.1| polyadenylate-binding protein, cytoplasmic and nu... 68 6e-09
gb|AGV54416.1| polyadenylate-binding protein [Phaseolus vulgaris] 68 6e-09
ref|XP_002882908.1| hypothetical protein ARALYDRAFT_478927 [Arab... 66 2e-08
ref|XP_002894431.1| hypothetical protein ARALYDRAFT_892356 [Arab... 65 3e-08
gb|EXC18502.1| Uncharacterized RNA-binding protein [Morus notabi... 65 4e-08
ref|XP_006307615.1| hypothetical protein CARUB_v10009243mg [Caps... 65 4e-08
ref|XP_006392809.1| hypothetical protein EUTSA_v10011518mg [Eutr... 64 1e-07
ref|XP_004510069.1| PREDICTED: heterogeneous nuclear ribonucleop... 64 1e-07
ref|XP_003541062.1| PREDICTED: heterogeneous nuclear ribonucleop... 60 9e-07
>ref|XP_002285377.1| PREDICTED: uncharacterized protein LOC100248626 [Vitis vinifera]
gi|147789426|emb|CAN66609.1| hypothetical protein
VITISV_017556 [Vitis vinifera]
Length = 449
Score = 72.8 bits (177), Expect = 2e-10
Identities = 34/44 (77%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
Frame = -1
Query: 522 YPESGHYGLSSS-AFTSQNHQPAGTSPVPRVPAGGMYQGMPPYY 394
YP+SGHY LSSS A+ SQ HQPAGTSPVPRVP GGMY PPYY
Sbjct: 406 YPDSGHYSLSSSSAYPSQIHQPAGTSPVPRVPPGGMYPSGPPYY 449
>ref|XP_006485663.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A1 homolog
isoform X1 [Citrus sinensis]
gi|568864564|ref|XP_006485664.1| PREDICTED:
heterogeneous nuclear ribonucleoproteins A1 homolog
isoform X2 [Citrus sinensis]
Length = 425
Score = 72.4 bits (176), Expect = 2e-10
Identities = 32/45 (71%), Positives = 38/45 (84%), Gaps = 2/45 (4%)
Frame = -1
Query: 522 YPESGHYGLSSSA--FTSQNHQPAGTSPVPRVPAGGMYQGMPPYY 394
YPE+GHYGLSS++ + SQ+HQ AGTSPVPRVP GGMY +PPYY
Sbjct: 381 YPEAGHYGLSSTSAGYPSQHHQAAGTSPVPRVPPGGMYPNVPPYY 425
>ref|XP_006451727.1| hypothetical protein CICLE_v10008394mg [Citrus clementina]
gi|567919444|ref|XP_006451728.1| hypothetical protein
CICLE_v10008394mg [Citrus clementina]
gi|557554953|gb|ESR64967.1| hypothetical protein
CICLE_v10008394mg [Citrus clementina]
gi|557554954|gb|ESR64968.1| hypothetical protein
CICLE_v10008394mg [Citrus clementina]
Length = 425
Score = 72.4 bits (176), Expect = 2e-10
Identities = 32/45 (71%), Positives = 38/45 (84%), Gaps = 2/45 (4%)
Frame = -1
Query: 522 YPESGHYGLSSSA--FTSQNHQPAGTSPVPRVPAGGMYQGMPPYY 394
YPE+GHYGLSS++ + SQ+HQ AGTSPVPRVP GGMY +PPYY
Sbjct: 381 YPEAGHYGLSSTSAGYPSQHHQAAGTSPVPRVPPGGMYPNVPPYY 425
>ref|XP_006582133.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform X1 [Glycine max]
gi|571461885|ref|XP_006582134.1| PREDICTED:
heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform X2 [Glycine max]
Length = 444
Score = 70.1 bits (170), Expect = 1e-09
Identities = 30/44 (68%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
Frame = -1
Query: 522 YPESGHYGLS-SSAFTSQNHQPAGTSPVPRVPAGGMYQGMPPYY 394
YP+SGHYGLS SS + +Q+H P+GTSP+PRVP G MY MPPYY
Sbjct: 401 YPDSGHYGLSASSGYQNQHHPPSGTSPMPRVPPGSMYPNMPPYY 444
>ref|XP_007021676.1| RNA-binding family protein [Theobroma cacao]
gi|508721304|gb|EOY13201.1| RNA-binding family protein
[Theobroma cacao]
Length = 429
Score = 69.3 bits (168), Expect = 2e-09
Identities = 33/44 (75%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Frame = -1
Query: 522 YPESGHYGLSSS-AFTSQNHQPAGTSPVPRVPAGGMYQGMPPYY 394
YPES HY LSSS AF SQ+HQ AGTSPVPRVP GGMY PP+Y
Sbjct: 386 YPESAHYSLSSSSAFPSQHHQGAGTSPVPRVPPGGMYPNGPPFY 429
>ref|XP_004137219.1| PREDICTED: uncharacterized protein LOC101207569 [Cucumis sativus]
gi|449483196|ref|XP_004156519.1| PREDICTED:
uncharacterized protein LOC101231665 [Cucumis sativus]
Length = 434
Score = 69.3 bits (168), Expect = 2e-09
Identities = 30/44 (68%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Frame = -1
Query: 522 YPESGHYGLSS-SAFTSQNHQPAGTSPVPRVPAGGMYQGMPPYY 394
YP+SGHY +SS S +Q+HQPAGTSP PRVP GGMY +PPYY
Sbjct: 391 YPDSGHYSMSSASGHPNQHHQPAGTSPAPRVPPGGMYPNVPPYY 434
>ref|XP_007211635.1| hypothetical protein PRUPE_ppa005857mg [Prunus persica]
gi|462407500|gb|EMJ12834.1| hypothetical protein
PRUPE_ppa005857mg [Prunus persica]
Length = 440
Score = 68.9 bits (167), Expect = 3e-09
Identities = 30/43 (69%), Positives = 36/43 (83%)
Frame = -1
Query: 522 YPESGHYGLSSSAFTSQNHQPAGTSPVPRVPAGGMYQGMPPYY 394
+PESGHYGLSS + +Q+HQ AGTSP+PRVP GGMY +PPYY
Sbjct: 400 FPESGHYGLSS--YQNQHHQQAGTSPMPRVPPGGMYPNVPPYY 440
>ref|NP_188119.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|42572443|ref|NP_974317.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
gi|75335116|sp|Q9LKA4.1|UBA2C_ARATH RecName:
Full=UBP1-associated protein 2C
gi|8777484|dbj|BAA97064.1| unnamed protein product
[Arabidopsis thaliana] gi|17380744|gb|AAL36202.1|
putative RNA-binding protein [Arabidopsis thaliana]
gi|20259621|gb|AAM14167.1| putative RNA-binding protein
[Arabidopsis thaliana] gi|222422941|dbj|BAH19456.1|
AT3G15010 [Arabidopsis thaliana]
gi|332642081|gb|AEE75602.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
gi|332642082|gb|AEE75603.1| RNA recognition
motif-containing protein [Arabidopsis thaliana]
Length = 404
Score = 67.8 bits (164), Expect = 6e-09
Identities = 32/44 (72%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
Frame = -1
Query: 522 YPESGHYGLSSSA-FTSQNHQPAGTSPVPRVPAGGMYQGMPPYY 394
YPESGHYGLSSSA + Q+HQ GTSPVPRVP GGMY PP Y
Sbjct: 361 YPESGHYGLSSSAGYPGQHHQAVGTSPVPRVPHGGMYPNGPPNY 404
>ref|XP_007133193.1| hypothetical protein PHAVU_011G159400g [Phaseolus vulgaris]
gi|561006193|gb|ESW05187.1| hypothetical protein
PHAVU_011G159400g [Phaseolus vulgaris]
Length = 438
Score = 67.8 bits (164), Expect = 6e-09
Identities = 29/44 (65%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Frame = -1
Query: 522 YPESGHYGLSSSA-FTSQNHQPAGTSPVPRVPAGGMYQGMPPYY 394
YPE GHYGLS+SA + +Q+H P+G SPVPRVP G MY +PPYY
Sbjct: 395 YPEGGHYGLSASAGYQNQHHPPSGASPVPRVPPGSMYPNVPPYY 438
>gb|AGV54510.1| polyadenylate-binding protein, cytoplasmic and nuclear-like protein
[Phaseolus vulgaris]
Length = 437
Score = 67.8 bits (164), Expect = 6e-09
Identities = 29/44 (65%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Frame = -1
Query: 522 YPESGHYGLSSSA-FTSQNHQPAGTSPVPRVPAGGMYQGMPPYY 394
YPE GHYGLS+SA + +Q+H P+G SPVPRVP G MY +PPYY
Sbjct: 394 YPEGGHYGLSASAGYQNQHHPPSGASPVPRVPPGSMYPNVPPYY 437
>gb|AGV54416.1| polyadenylate-binding protein [Phaseolus vulgaris]
Length = 438
Score = 67.8 bits (164), Expect = 6e-09
Identities = 29/44 (65%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Frame = -1
Query: 522 YPESGHYGLSSSA-FTSQNHQPAGTSPVPRVPAGGMYQGMPPYY 394
YPE GHYGLS+SA + +Q+H P+G SPVPRVP G MY +PPYY
Sbjct: 395 YPEGGHYGLSASAGYQNQHHPPSGASPVPRVPPGSMYPNVPPYY 438
>ref|XP_002882908.1| hypothetical protein ARALYDRAFT_478927 [Arabidopsis lyrata subsp.
lyrata] gi|297328748|gb|EFH59167.1| hypothetical protein
ARALYDRAFT_478927 [Arabidopsis lyrata subsp. lyrata]
Length = 404
Score = 66.2 bits (160), Expect = 2e-08
Identities = 31/44 (70%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Frame = -1
Query: 522 YPESGHYGLSSSA-FTSQNHQPAGTSPVPRVPAGGMYQGMPPYY 394
YPESGHYGLSSS + Q+HQ GTSPVPRVP GGMY PP Y
Sbjct: 361 YPESGHYGLSSSTGYPGQHHQAVGTSPVPRVPHGGMYPNGPPNY 404
>ref|XP_002894431.1| hypothetical protein ARALYDRAFT_892356 [Arabidopsis lyrata subsp.
lyrata] gi|297340273|gb|EFH70690.1| hypothetical protein
ARALYDRAFT_892356 [Arabidopsis lyrata subsp. lyrata]
Length = 420
Score = 65.5 bits (158), Expect = 3e-08
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = -1
Query: 522 YPESGHYGLSSSAFTSQNHQPAGTSPVPRVPAGGMYQGMPPYY 394
YPESGHYG SS++ HQP G+SPVPRVP GGMY +PP Y
Sbjct: 378 YPESGHYGHSSASAYPAQHQPVGSSPVPRVPLGGMYPNVPPNY 420
>gb|EXC18502.1| Uncharacterized RNA-binding protein [Morus notabilis]
Length = 416
Score = 65.1 bits (157), Expect = 4e-08
Identities = 31/44 (70%), Positives = 35/44 (79%), Gaps = 1/44 (2%)
Frame = -1
Query: 522 YPESGHYGLSSS-AFTSQNHQPAGTSPVPRVPAGGMYQGMPPYY 394
YPESGHYGLSSS A+ + +HQ GTSP+PRVP GGMY PPYY
Sbjct: 375 YPESGHYGLSSSSAYPNPHHQQPGTSPIPRVPPGGMYP--PPYY 416
>ref|XP_006307615.1| hypothetical protein CARUB_v10009243mg [Capsella rubella]
gi|565499954|ref|XP_006307616.1| hypothetical protein
CARUB_v10009243mg [Capsella rubella]
gi|482576326|gb|EOA40513.1| hypothetical protein
CARUB_v10009243mg [Capsella rubella]
gi|482576327|gb|EOA40514.1| hypothetical protein
CARUB_v10009243mg [Capsella rubella]
Length = 422
Score = 65.1 bits (157), Expect = 4e-08
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = -1
Query: 522 YPESGHYGLSSSAFTSQNHQPAGTSPVPRVPAGGMYQGMPPYY 394
YPESGHYG SS++ HQP G+SPVPRVP GGMY +PP Y
Sbjct: 380 YPESGHYGHSSASAYPGQHQPVGSSPVPRVPLGGMYPNVPPNY 422
>ref|XP_006392809.1| hypothetical protein EUTSA_v10011518mg [Eutrema salsugineum]
gi|557089387|gb|ESQ30095.1| hypothetical protein
EUTSA_v10011518mg [Eutrema salsugineum]
Length = 421
Score = 63.5 bits (153), Expect = 1e-07
Identities = 27/43 (62%), Positives = 31/43 (72%)
Frame = -1
Query: 522 YPESGHYGLSSSAFTSQNHQPAGTSPVPRVPAGGMYQGMPPYY 394
YPE GHYG SS++ HQP G+SPVPRVP GGMY +PP Y
Sbjct: 379 YPEGGHYGHSSASAYPGQHQPVGSSPVPRVPLGGMYPNVPPNY 421
>ref|XP_004510069.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Cicer arietinum]
Length = 418
Score = 63.5 bits (153), Expect = 1e-07
Identities = 28/43 (65%), Positives = 32/43 (74%)
Frame = -1
Query: 522 YPESGHYGLSSSAFTSQNHQPAGTSPVPRVPAGGMYQGMPPYY 394
YPESGHY SSS + +Q+H PAG SPVPRVP MY +PPYY
Sbjct: 378 YPESGHY--SSSGYQNQHHPPAGASPVPRVPPSSMYPNVPPYY 418
>ref|XP_003541062.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform X1
[Glycine max] gi|571493430|ref|XP_006592544.1|
PREDICTED: heterogeneous nuclear ribonucleoprotein A3
isoform X2 [Glycine max]
gi|571493432|ref|XP_006592545.1| PREDICTED:
heterogeneous nuclear ribonucleoprotein A3 isoform X3
[Glycine max]
Length = 437
Score = 60.5 bits (145), Expect = 9e-07
Identities = 28/44 (63%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
Frame = -1
Query: 522 YPESGHYGLS-SSAFTSQNHQPAGTSPVPRVPAGGMYQGMPPYY 394
YP+SGHYGLS SS + +Q+H P+G SPVPRVP MY +PPYY
Sbjct: 396 YPDSGHYGLSASSGYQNQHHPPSGASPVPRVPP--MYPNVPPYY 437