BLASTX nr result
ID: Sinomenium22_contig00011399
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00011399
(365 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007199117.1| hypothetical protein PRUPE_ppa020853mg [Prun... 67 3e-09
ref|XP_004979460.1| PREDICTED: 50S ribosomal protein 6, chloropl... 66 6e-09
ref|NP_568358.1| plastid-specific 50S ribosomal protein 6 [Arabi... 66 6e-09
ref|XP_002277800.1| PREDICTED: 50S ribosomal protein 6, chloropl... 66 6e-09
ref|XP_006400330.1| hypothetical protein EUTSA_v10015071mg [Eutr... 65 1e-08
ref|XP_002871784.1| hypothetical protein ARALYDRAFT_488653 [Arab... 65 1e-08
ref|XP_002456091.1| hypothetical protein SORBIDRAFT_03g030290 [S... 65 1e-08
ref|NP_001150884.1| plastid-specific ribosomal protein 6 [Zea ma... 65 1e-08
ref|NP_001158969.1| plastid-specific ribosomal protein 6 [Zea ma... 65 1e-08
ref|XP_004301446.1| PREDICTED: 50S ribosomal protein 6, chloropl... 64 2e-08
ref|XP_007226349.1| hypothetical protein PRUPE_ppa022547mg [Prun... 64 2e-08
ref|XP_002510018.1| 50S ribosomal protein CL25, chloroplast prec... 64 2e-08
ref|XP_006852759.1| hypothetical protein AMTR_s00033p00126850 [A... 64 2e-08
sp|P82411.1|PSRP6_SPIOL RecName: Full=50S ribosomal protein 6, c... 63 4e-08
ref|XP_006288938.1| hypothetical protein CARUB_v10002303mg [Caps... 63 5e-08
ref|XP_007215115.1| hypothetical protein PRUPE_ppa012953mg [Prun... 62 6e-08
gb|EXC01136.1| 50S ribosomal protein 6 [Morus notabilis] 62 8e-08
ref|XP_006433698.1| hypothetical protein CICLE_v10002778mg [Citr... 62 8e-08
dbj|BAJ92980.1| predicted protein [Hordeum vulgare subsp. vulgare] 62 8e-08
gb|EEE52269.1| hypothetical protein OsJ_34231 [Oryza sativa Japo... 62 8e-08
>ref|XP_007199117.1| hypothetical protein PRUPE_ppa020853mg [Prunus persica]
gi|462394517|gb|EMJ00316.1| hypothetical protein
PRUPE_ppa020853mg [Prunus persica]
Length = 74
Score = 67.0 bits (162), Expect = 3e-09
Identities = 33/46 (71%), Positives = 36/46 (78%), Gaps = 1/46 (2%)
Frame = +2
Query: 17 TSPSLGVVRRVVGV-IECSSRPQKKATAHHMKTRPKKTAPWDVKRR 151
TSP G V G+ IECSSRPQKKATAHH KTRP+KT PWDVKR+
Sbjct: 19 TSPLRGSVGGGTGLMIECSSRPQKKATAHHRKTRPRKTQPWDVKRK 64
>ref|XP_004979460.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Setaria
italica]
Length = 117
Score = 65.9 bits (159), Expect = 6e-09
Identities = 30/43 (69%), Positives = 32/43 (74%)
Frame = +2
Query: 23 PSLGVVRRVVGVIECSSRPQKKATAHHMKTRPKKTAPWDVKRR 151
PSL R +ECSSRPQKK T HHMKTRPKKT PWD+KRR
Sbjct: 30 PSLLGGGRAALAVECSSRPQKKGTKHHMKTRPKKTQPWDIKRR 72
>ref|NP_568358.1| plastid-specific 50S ribosomal protein 6 [Arabidopsis thaliana]
gi|75171293|sp|Q9FKP0.1|PSRP6_ARATH RecName: Full=50S
ribosomal protein 6, chloroplastic; AltName: Full=CL25;
AltName: Full=Plastid-specific 50S ribosomal protein 6;
Short=PSRP-6; Flags: Precursor
gi|10177888|dbj|BAB11220.1| unnamed protein product
[Arabidopsis thaliana] gi|14517428|gb|AAK62604.1|
AT5g17870/MPI7_10 [Arabidopsis thaliana]
gi|20147339|gb|AAM10383.1| AT5g17870/MPI7_10
[Arabidopsis thaliana] gi|21554906|gb|AAM63726.1|
plastid-specific ribosomal protein 6 precursor
(Psrp-6)-like [Arabidopsis thaliana]
gi|332005097|gb|AED92480.1| plastid-specific 50S
ribosomal protein 6 [Arabidopsis thaliana]
Length = 106
Score = 65.9 bits (159), Expect = 6e-09
Identities = 30/43 (69%), Positives = 34/43 (79%)
Frame = +2
Query: 23 PSLGVVRRVVGVIECSSRPQKKATAHHMKTRPKKTAPWDVKRR 151
P LG + VIECSSRPQKK+TAHH KTRPKKT PWD+KR+
Sbjct: 26 PKLGNGGGLGMVIECSSRPQKKSTAHHRKTRPKKTQPWDIKRK 68
>ref|XP_002277800.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Vitis vinifera]
Length = 108
Score = 65.9 bits (159), Expect = 6e-09
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +2
Query: 56 VIECSSRPQKKATAHHMKTRPKKTAPWDVKRR 151
VIECSSRPQKK T+HHMKTRP+KT PWD+KRR
Sbjct: 36 VIECSSRPQKKGTSHHMKTRPRKTQPWDIKRR 67
>ref|XP_006400330.1| hypothetical protein EUTSA_v10015071mg [Eutrema salsugineum]
gi|557101420|gb|ESQ41783.1| hypothetical protein
EUTSA_v10015071mg [Eutrema salsugineum]
Length = 109
Score = 65.1 bits (157), Expect = 1e-08
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +2
Query: 56 VIECSSRPQKKATAHHMKTRPKKTAPWDVKRR 151
VIECSSRPQKK+TAHH KTRPKKT PWD+KR+
Sbjct: 37 VIECSSRPQKKSTAHHRKTRPKKTQPWDIKRK 68
>ref|XP_002871784.1| hypothetical protein ARALYDRAFT_488653 [Arabidopsis lyrata subsp.
lyrata] gi|297317621|gb|EFH48043.1| hypothetical protein
ARALYDRAFT_488653 [Arabidopsis lyrata subsp. lyrata]
Length = 108
Score = 64.7 bits (156), Expect = 1e-08
Identities = 29/43 (67%), Positives = 35/43 (81%)
Frame = +2
Query: 23 PSLGVVRRVVGVIECSSRPQKKATAHHMKTRPKKTAPWDVKRR 151
P+LG + VIECSSRPQKK+TAHH K+RPKKT PWD+KR+
Sbjct: 26 PTLGNGGGLGMVIECSSRPQKKSTAHHRKSRPKKTQPWDIKRK 68
>ref|XP_002456091.1| hypothetical protein SORBIDRAFT_03g030290 [Sorghum bicolor]
gi|241928066|gb|EES01211.1| hypothetical protein
SORBIDRAFT_03g030290 [Sorghum bicolor]
Length = 123
Score = 64.7 bits (156), Expect = 1e-08
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +2
Query: 44 RVVGVIECSSRPQKKATAHHMKTRPKKTAPWDVKRR 151
R +ECSSRPQKK T HHMKTRPKKT PWD+KRR
Sbjct: 40 RAALAVECSSRPQKKGTKHHMKTRPKKTQPWDIKRR 75
>ref|NP_001150884.1| plastid-specific ribosomal protein 6 [Zea mays]
gi|195642604|gb|ACG40770.1| plastid-specific ribosomal
protein 6 precursor [Zea mays]
Length = 123
Score = 64.7 bits (156), Expect = 1e-08
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +2
Query: 44 RVVGVIECSSRPQKKATAHHMKTRPKKTAPWDVKRR 151
R +ECSSRPQKK T HHMKTRPKKT PWD+KRR
Sbjct: 42 RAALAVECSSRPQKKGTKHHMKTRPKKTQPWDIKRR 77
>ref|NP_001158969.1| plastid-specific ribosomal protein 6 [Zea mays]
gi|195615274|gb|ACG29467.1| plastid-specific ribosomal
protein 6 precursor [Zea mays]
gi|413925596|gb|AFW65528.1| plastid-specific ribosomal
protein 6 [Zea mays]
Length = 121
Score = 64.7 bits (156), Expect = 1e-08
Identities = 27/36 (75%), Positives = 29/36 (80%)
Frame = +2
Query: 44 RVVGVIECSSRPQKKATAHHMKTRPKKTAPWDVKRR 151
R +ECSSRPQKK T HHMKTRPKKT PWD+KRR
Sbjct: 40 RAALAVECSSRPQKKGTKHHMKTRPKKTQPWDIKRR 75
>ref|XP_004301446.1| PREDICTED: 50S ribosomal protein 6, chloroplastic-like [Fragaria
vesca subsp. vesca]
Length = 114
Score = 64.3 bits (155), Expect = 2e-08
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +2
Query: 56 VIECSSRPQKKATAHHMKTRPKKTAPWDVKRR 151
VIECSSRPQKKATAHH KTRP+KTA WDVKR+
Sbjct: 45 VIECSSRPQKKATAHHRKTRPRKTAAWDVKRK 76
>ref|XP_007226349.1| hypothetical protein PRUPE_ppa022547mg [Prunus persica]
gi|462423285|gb|EMJ27548.1| hypothetical protein
PRUPE_ppa022547mg [Prunus persica]
Length = 67
Score = 64.3 bits (155), Expect = 2e-08
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +2
Query: 56 VIECSSRPQKKATAHHMKTRPKKTAPWDVKRR 151
+IECSSRPQKKATAHH KTRP+KT PWDVKR+
Sbjct: 1 MIECSSRPQKKATAHHRKTRPRKTQPWDVKRK 32
>ref|XP_002510018.1| 50S ribosomal protein CL25, chloroplast precursor, putative
[Ricinus communis] gi|223550719|gb|EEF52205.1| 50S
ribosomal protein CL25, chloroplast precursor, putative
[Ricinus communis]
Length = 126
Score = 64.3 bits (155), Expect = 2e-08
Identities = 26/32 (81%), Positives = 31/32 (96%)
Frame = +2
Query: 56 VIECSSRPQKKATAHHMKTRPKKTAPWDVKRR 151
VIECSSRP+KKATAHHMKTRPKK+ PWD++R+
Sbjct: 44 VIECSSRPKKKATAHHMKTRPKKSQPWDIRRK 75
>ref|XP_006852759.1| hypothetical protein AMTR_s00033p00126850 [Amborella trichopoda]
gi|548856373|gb|ERN14226.1| hypothetical protein
AMTR_s00033p00126850 [Amborella trichopoda]
Length = 97
Score = 63.9 bits (154), Expect = 2e-08
Identities = 28/46 (60%), Positives = 36/46 (78%), Gaps = 4/46 (8%)
Frame = +2
Query: 23 PSLGVVRRV----VGVIECSSRPQKKATAHHMKTRPKKTAPWDVKR 148
PS G+ ++V V ++ECSSRPQKKAT+HHMKTRP+K WD+KR
Sbjct: 17 PSFGLKKQVELRKVSIVECSSRPQKKATSHHMKTRPRKRQAWDIKR 62
>sp|P82411.1|PSRP6_SPIOL RecName: Full=50S ribosomal protein 6, chloroplastic; AltName:
Full=CL25; AltName: Full=Plastid-specific 50S ribosomal
protein 6; Short=PSRP-6; Flags: Precursor
gi|7578927|gb|AAF64189.1|AF245292_1 plastid-specific
ribosomal protein 6 precursor [Spinacia oleracea]
Length = 116
Score = 63.2 bits (152), Expect = 4e-08
Identities = 27/30 (90%), Positives = 28/30 (93%)
Frame = +2
Query: 59 IECSSRPQKKATAHHMKTRPKKTAPWDVKR 148
IECSSRPQKK TAHHMKTRPKKTA WD+KR
Sbjct: 45 IECSSRPQKKGTAHHMKTRPKKTARWDIKR 74
>ref|XP_006288938.1| hypothetical protein CARUB_v10002303mg [Capsella rubella]
gi|482557644|gb|EOA21836.1| hypothetical protein
CARUB_v10002303mg [Capsella rubella]
Length = 109
Score = 62.8 bits (151), Expect = 5e-08
Identities = 28/43 (65%), Positives = 34/43 (79%)
Frame = +2
Query: 23 PSLGVVRRVVGVIECSSRPQKKATAHHMKTRPKKTAPWDVKRR 151
P LG + VIECSSRPQKK+TAHH K+RPKK+ PWD+KR+
Sbjct: 27 PKLGNGGGLGMVIECSSRPQKKSTAHHRKSRPKKSQPWDIKRK 69
>ref|XP_007215115.1| hypothetical protein PRUPE_ppa012953mg [Prunus persica]
gi|462411265|gb|EMJ16314.1| hypothetical protein
PRUPE_ppa012953mg [Prunus persica]
Length = 148
Score = 62.4 bits (150), Expect = 6e-08
Identities = 32/46 (69%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = +2
Query: 17 TSPSLGVVRRVVGV-IECSSRPQKKATAHHMKTRPKKTAPWDVKRR 151
TSP G V G+ IE SSRPQKKATAHH KTRP+KT PWDVKR+
Sbjct: 19 TSPWRGSVGGGTGLMIEYSSRPQKKATAHHRKTRPRKTQPWDVKRK 64
>gb|EXC01136.1| 50S ribosomal protein 6 [Morus notabilis]
Length = 115
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/32 (81%), Positives = 29/32 (90%)
Frame = +2
Query: 56 VIECSSRPQKKATAHHMKTRPKKTAPWDVKRR 151
VIECSSRP KKATAHHMKTRPKKT WD++R+
Sbjct: 42 VIECSSRPTKKATAHHMKTRPKKTQAWDIRRK 73
>ref|XP_006433698.1| hypothetical protein CICLE_v10002778mg [Citrus clementina]
gi|557535820|gb|ESR46938.1| hypothetical protein
CICLE_v10002778mg [Citrus clementina]
Length = 149
Score = 62.0 bits (149), Expect = 8e-08
Identities = 34/52 (65%), Positives = 39/52 (75%), Gaps = 2/52 (3%)
Frame = +2
Query: 2 VAKHNTSPSLGVVRRV-VG-VIECSSRPQKKATAHHMKTRPKKTAPWDVKRR 151
V + +S LGV + VG VIE SSRPQKKATAHHMKTRP+KT PWDV R+
Sbjct: 51 VVPNLSSKKLGVEGKCNVGLVIENSSRPQKKATAHHMKTRPRKTQPWDVNRK 102
>dbj|BAJ92980.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 118
Score = 62.0 bits (149), Expect = 8e-08
Identities = 31/53 (58%), Positives = 35/53 (66%), Gaps = 3/53 (5%)
Frame = +2
Query: 2 VAKHNTSPSLGVVRRVVGV---IECSSRPQKKATAHHMKTRPKKTAPWDVKRR 151
VA + PS+G G +ECSSRPQKK T HHMKTRPKKT WD+KRR
Sbjct: 16 VAPRSARPSVGFFGVDGGCALSVECSSRPQKKGTKHHMKTRPKKTQRWDIKRR 68
>gb|EEE52269.1| hypothetical protein OsJ_34231 [Oryza sativa Japonica Group]
Length = 127
Score = 62.0 bits (149), Expect = 8e-08
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +2
Query: 59 IECSSRPQKKATAHHMKTRPKKTAPWDVKRR 151
+ECSSRPQKKAT HHMKTRPKK+ PWD KRR
Sbjct: 41 VECSSRPQKKATKHHMKTRPKKSQPWDRKRR 71