BLASTX nr result

ID: Sinomenium22_contig00011194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00011194
         (1308 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containi...   572   e-160
emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]   570   e-160
ref|XP_004292910.1| PREDICTED: pentatricopeptide repeat-containi...   570   e-160
ref|XP_006346695.1| PREDICTED: pentatricopeptide repeat-containi...   567   e-159
gb|EXB56341.1| hypothetical protein L484_024883 [Morus notabilis]     566   e-159
ref|XP_007225185.1| hypothetical protein PRUPE_ppa002191mg [Prun...   562   e-157
ref|XP_004244963.1| PREDICTED: pentatricopeptide repeat-containi...   562   e-157
gb|EYU17498.1| hypothetical protein MIMGU_mgv1a002335mg [Mimulus...   553   e-155
ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containi...   550   e-154
ref|XP_007018012.1| Pentatricopeptide repeat superfamily protein...   549   e-153
ref|XP_007018011.1| Pentatricopeptide repeat (PPR-like) superfam...   549   e-153
ref|XP_007018010.1| Pentatricopeptide repeat (PPR-like) superfam...   549   e-153
ref|XP_004500883.1| PREDICTED: pentatricopeptide repeat-containi...   547   e-153
ref|XP_004500882.1| PREDICTED: pentatricopeptide repeat-containi...   547   e-153
ref|XP_006577944.1| PREDICTED: pentatricopeptide repeat-containi...   543   e-152
ref|XP_006577943.1| PREDICTED: pentatricopeptide repeat-containi...   543   e-152
ref|XP_006435342.1| hypothetical protein CICLE_v10000451mg [Citr...   543   e-152
ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containi...   543   e-152
ref|XP_002510663.1| pentatricopeptide repeat-containing protein,...   543   e-152
ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containi...   543   e-152

>ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial [Vitis vinifera]
            gi|297745544|emb|CBI40709.3| unnamed protein product
            [Vitis vinifera]
          Length = 695

 Score =  572 bits (1473), Expect = e-160
 Identities = 282/352 (80%), Positives = 317/352 (90%)
 Frame = +2

Query: 248  RLVESYRAVPAPLWHSVLKSLTSSPSTLHTAYALVEWLQTHNLCFSYDLLYSILIHALGR 427
            +LVESYRAVPAPLWHS+LKSL S  S++ TAY+LV WL+ HNLCFSY+LLYSILIHALGR
Sbjct: 107  QLVESYRAVPAPLWHSLLKSLCSDSSSIGTAYSLVTWLERHNLCFSYELLYSILIHALGR 166

Query: 428  SQKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLII 607
            S+KLYEAFLLSQR  LTPLTYNALIGAC RN D+EKALNLM +MRRDGF SD+VNYS II
Sbjct: 167  SEKLYEAFLLSQRQTLTPLTYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFII 226

Query: 608  QSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQG 787
            QSLTR+NK D  +L K+Y E+E+D+IELDGQL ND+IV FAK+GD +RAM FLAM +G G
Sbjct: 227  QSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNG 286

Query: 788  LSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAE 967
            LSPKTATLVAVI+ALGN+GRT EAEA+FEE+KEGG+ PRTRAYNALLKGYVK+GSL+DAE
Sbjct: 287  LSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAE 346

Query: 968  SIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASY 1147
            SIVSEMER G SPDEHTYSLLIDAYANAGRWESARIVLKEME S V+PNSYVFSRILASY
Sbjct: 347  SIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASY 406

Query: 1148 RDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMK 1303
            RDRG WQKSF VLREMR +GVSPDRHFYNVMIDTFGK NCL+H ++TF+RM+
Sbjct: 407  RDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMR 458



 Score =  121 bits (303), Expect = 8e-25
 Identities = 88/358 (24%), Positives = 163/358 (45%), Gaps = 9/358 (2%)
 Frame = +2

Query: 260  SYRAVPAPLWHSVLKSLTSSPSTLHTAYALVEWLQTHNLCFSYDLL-YSILIHALGRS-- 430
            S R    PL ++ L    +    L  A  L+  ++     F  D + YS +I +L R+  
Sbjct: 177  SQRQTLTPLTYNALIGACARNDDLEKALNLMSRMRRDG--FPSDFVNYSFIIQSLTRTNK 234

Query: 431  ------QKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVN 592
                  QK+Y A + S + +L     N +I    ++GD+ +A++ +  ++ +G       
Sbjct: 235  SDSSMLQKIY-AEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTAT 293

Query: 593  YSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAM 772
               +I +L  + + +      ++ EL+   +    +  N L+  + K G    A   ++ 
Sbjct: 294  LVAVITALGNAGRTEEA--EAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSE 351

Query: 773  FEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGS 952
             E  G SP   T   +I A  N+GR   A  V +EM+  GV+P +  ++ +L  Y   G 
Sbjct: 352  MERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGK 411

Query: 953  LRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSR 1132
             + +  ++ EM   GVSPD H Y+++ID +      + A      M    VQP++  ++ 
Sbjct: 412  WQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNT 471

Query: 1133 ILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
            ++  +   G   K+  +   M+ +G SP    YN+MI++FG+    E V +   +M+S
Sbjct: 472  LIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQS 529



 Score =  119 bits (298), Expect = 3e-24
 Identities = 70/297 (23%), Positives = 138/297 (46%), Gaps = 2/297 (0%)
 Frame = +2

Query: 422  GRSQKLYEAFLLSQRHDLTPLT--YNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNY 595
            GR+++    F   +   L P T  YNAL+    + G ++ A +++ +M R GF  D   Y
Sbjct: 305  GRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTY 364

Query: 596  SLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMF 775
            SL+I +   + + +   +  +  E+EA  +  +  + + ++ ++   G   ++   L   
Sbjct: 365  SLLIDAYANAGRWESARI--VLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREM 422

Query: 776  EGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSL 955
               G+SP       +I   G       A A F+ M+  GV+P    +N L+  + KSG  
Sbjct: 423  RNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHH 482

Query: 956  RDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRI 1135
              AE +   M+  G SP   TY+++I+++    RWE  + +L +M+   +  N   ++ +
Sbjct: 483  NKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTL 542

Query: 1136 LASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
            +  Y   G ++ +   L  M+  G+ P    YN +I+ + +    E  ++ F  M++
Sbjct: 543  VDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRA 599



 Score = 99.0 bits (245), Expect = 4e-18
 Identities = 72/307 (23%), Positives = 143/307 (46%), Gaps = 6/307 (1%)
 Frame = +2

Query: 398  YSILIHALGRSQKLYEAFLLSQRHDLTPLTYNA-----LIGACTRNGDIEKALNLMGKMR 562
            YS+LI A   + +   A ++ +  + + +  N+     ++ +    G  +K+  ++ +MR
Sbjct: 364  YSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMR 423

Query: 563  RDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGD 742
              G   D   Y+++I +  + N LD  +    ++ +  + ++ D    N LI    K+G 
Sbjct: 424  NSGVSPDRHFYNVMIDTFGKCNCLDHALA--TFDRMRMEGVQPDAVTWNTLIDCHCKSGH 481

Query: 743  PDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNA 922
             ++A       +  G SP T T   +I++ G   R  + + +  +M+  G+      Y  
Sbjct: 482  HNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTT 541

Query: 923  LLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESN 1102
            L+  Y +SG  +DA   +  M+  G+ P    Y+ LI+AYA  G  E A    + M    
Sbjct: 542  LVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADG 601

Query: 1103 VQPNSYVFSRILASY-RDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHV 1279
            ++P+  V + ++ ++  DR D  ++FSVL+ M+ N + PD   Y  ++    +    + V
Sbjct: 602  LKPSVLVLNSLINAFGEDRRD-AEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKV 660

Query: 1280 VSTFERM 1300
             + +E M
Sbjct: 661  PAVYEEM 667



 Score = 85.1 bits (209), Expect = 6e-14
 Identities = 64/269 (23%), Positives = 118/269 (43%), Gaps = 2/269 (0%)
 Frame = +2

Query: 422  GRSQKLYEAFLLSQRHDLTPLT--YNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNY 595
            G+ QK ++     +   ++P    YN +I    +   ++ AL    +MR +G   D V +
Sbjct: 410  GKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTW 469

Query: 596  SLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMF 775
            + +I    +S   +     +L+  ++           N +I +F +    +     L   
Sbjct: 470  NTLIDCHCKSGHHNKA--EELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKM 527

Query: 776  EGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSL 955
            + QGL     T   ++   G SGR  +A    E MK  G+KP +  YNAL+  Y + G  
Sbjct: 528  QSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLS 587

Query: 956  RDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRI 1135
              A +    M   G+ P     + LI+A+    R   A  VL+ M+E++++P+   ++ +
Sbjct: 588  EQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTL 647

Query: 1136 LASYRDRGDWQKSFSVLREMRCNGVSPDR 1222
            + +      + K  +V  EM  +G +PDR
Sbjct: 648  MKALIRVEKFDKVPAVYEEMTLSGCTPDR 676



 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 54/208 (25%), Positives = 93/208 (44%), Gaps = 2/208 (0%)
 Frame = +2

Query: 422  GRSQKLYEAFLLSQRHDLTPLT--YNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNY 595
            G   K  E F   Q    +P T  YN +I +       E    L+GKM+  G L++ V Y
Sbjct: 480  GHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTY 539

Query: 596  SLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMF 775
            + ++    +S +    I  +    +++  ++    + N LI A+A+ G  ++A+    + 
Sbjct: 540  TTLVDIYGQSGRFKDAI--ECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVM 597

Query: 776  EGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSL 955
               GL P    L ++I+A G   R  EA +V + MKE  +KP    Y  L+K  ++    
Sbjct: 598  RADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKF 657

Query: 956  RDAESIVSEMERGGVSPDEHTYSLLIDA 1039
                ++  EM   G +PD    ++L  A
Sbjct: 658  DKVPAVYEEMTLSGCTPDRKARAMLRSA 685


>emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
          Length = 724

 Score =  570 bits (1470), Expect = e-160
 Identities = 281/352 (79%), Positives = 317/352 (90%)
 Frame = +2

Query: 248  RLVESYRAVPAPLWHSVLKSLTSSPSTLHTAYALVEWLQTHNLCFSYDLLYSILIHALGR 427
            +LVESYRAVPAPLWHS+LKSL S  S++ TAY+LV WL+ HNLCFSY+LLYSILIHALGR
Sbjct: 178  QLVESYRAVPAPLWHSLLKSLCSDSSSIGTAYSLVTWLERHNLCFSYELLYSILIHALGR 237

Query: 428  SQKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLII 607
            S+KLYEAFLLSQR  LTPLTYNALIGAC RN D+EKALNLM +MRRDG+ SD+VNYS II
Sbjct: 238  SEKLYEAFLLSQRQTLTPLTYNALIGACARNDDLEKALNLMSRMRRDGYPSDFVNYSFII 297

Query: 608  QSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQG 787
            QSLTR+NK D  +L K+Y E+E+D+IELDGQL ND+IV FAK+GD +RAM FLAM +G G
Sbjct: 298  QSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNG 357

Query: 788  LSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAE 967
            LSPKTATLVAVI+ALGN+GRT EAEA+FEE+KEGG+ PRTRAYNALLKGYVK+GSL+DAE
Sbjct: 358  LSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAE 417

Query: 968  SIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASY 1147
            SIVSEMER G SPDEHTYSLLIDAYANAGRWESARIVLKEME S V+PNSYVFSRILASY
Sbjct: 418  SIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASY 477

Query: 1148 RDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMK 1303
            RDRG WQKSF VLREMR +GVSPDRHFYNVMIDTFGK NCL+H ++TF+RM+
Sbjct: 478  RDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMR 529



 Score =  120 bits (301), Expect = 1e-24
 Identities = 86/357 (24%), Positives = 162/357 (45%), Gaps = 8/357 (2%)
 Frame = +2

Query: 260  SYRAVPAPLWHSVLKSLTSSPSTLHTAYALVEWLQTHNLCFSYDLLYSILIHALGRS--- 430
            S R    PL ++ L    +    L  A  L+  ++       + + YS +I +L R+   
Sbjct: 248  SQRQTLTPLTYNALIGACARNDDLEKALNLMSRMRRDGYPSDF-VNYSFIIQSLTRTNKS 306

Query: 431  -----QKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNY 595
                 QK+Y A + S + +L     N +I    ++GD+ +A++ +  ++ +G        
Sbjct: 307  DSSMLQKIY-AEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATL 365

Query: 596  SLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMF 775
              +I +L  + + +      ++ EL+   +    +  N L+  + K G    A   ++  
Sbjct: 366  VAVITALGNAGRTEEA--EAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEM 423

Query: 776  EGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSL 955
            E  G SP   T   +I A  N+GR   A  V +EM+  GV+P +  ++ +L  Y   G  
Sbjct: 424  ERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKW 483

Query: 956  RDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRI 1135
            + +  ++ EM   GVSPD H Y+++ID +      + A      M    VQP++  ++ +
Sbjct: 484  QKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTL 543

Query: 1136 LASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
            +  +   G   K+  +   M+ +G SP    YN+MI++FG+    E V +   +M+S
Sbjct: 544  IDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQS 600



 Score =  101 bits (252), Expect = 6e-19
 Identities = 76/324 (23%), Positives = 139/324 (42%), Gaps = 31/324 (9%)
 Frame = +2

Query: 422  GRSQKLYEAFLLSQRHDLTPLT--YNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNY 595
            GR+++    F   +   L P T  YNAL+    + G ++ A +++ +M R GF  D   Y
Sbjct: 376  GRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTY 435

Query: 596  SLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMF 775
            SL+I +   + + +   +  +  E+EA  +  +  + + ++ ++   G   ++   L   
Sbjct: 436  SLLIDAYANAGRWESARI--VLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREM 493

Query: 776  EGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSL 955
               G+SP       +I   G       A A F+ M+  GV+P    +N L+  + KSG  
Sbjct: 494  RNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHH 553

Query: 956  RDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVF--- 1126
              AE +   M+  G SP   TY+++I+++    RWE  + +L +M+   +  N   +   
Sbjct: 554  NKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTL 613

Query: 1127 --------------------------SRILASYRDRGDWQKSFSVLREMRCNGVSPDRHF 1228
                                      S I A   DR D  ++FSVL+ M+ N + PD   
Sbjct: 614  GLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRD-AEAFSVLQYMKENDLKPDVVT 672

Query: 1229 YNVMIDTFGKYNCLEHVVSTFERM 1300
            Y  ++    +    + V + +E M
Sbjct: 673  YTTLMKALIRVEKFDKVPAVYEEM 696



 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 52/219 (23%), Positives = 93/219 (42%), Gaps = 5/219 (2%)
 Frame = +2

Query: 398  YSILIHALGRSQKLYEAFLLSQRHDLT-----PLTYNALIGACTRNGDIEKALNLMGKMR 562
            Y+++I   G+   L  A     R  +       +T+N LI    ++G   KA  L   M+
Sbjct: 505  YNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQ 564

Query: 563  RDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGD 742
              G       Y+++I S     + +   +  L  ++++      G L+N  +V +   G 
Sbjct: 565  ESGCSPCTTTYNIMINSFGEQERWE--DVKTLLGKMQSQ-----GLLAN--VVTYTTLGL 615

Query: 743  PDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNA 922
             ++A+    +    GL P    L ++I+A G   R  EA +V + MKE  +KP    Y  
Sbjct: 616  SEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTT 675

Query: 923  LLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDA 1039
            L+K  ++        ++  EM   G +PD    ++L  A
Sbjct: 676  LMKALIRVEKFDKVPAVYEEMTLSGCTPDRKARAMLRSA 714


>ref|XP_004292910.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 813

 Score =  570 bits (1468), Expect = e-160
 Identities = 283/358 (79%), Positives = 319/358 (89%), Gaps = 2/358 (0%)
 Frame = +2

Query: 239  ADRRLVESYRAVPAPLWHSVLKSL--TSSPSTLHTAYALVEWLQTHNLCFSYDLLYSILI 412
            A+ +L E YRAVPAPLWHS+LKSL  +SS S+L  AYALV WLQ HNLCFSY+LLYSILI
Sbjct: 219  AEFQLAELYRAVPAPLWHSLLKSLCSSSSSSSLKQAYALVAWLQKHNLCFSYELLYSILI 278

Query: 413  HALGRSQKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVN 592
            HALGRS+KLYEAFLLSQR  LTPLTYNALIGAC RNGD+EKALNLM +MR+DG+ SD+VN
Sbjct: 279  HALGRSEKLYEAFLLSQRRTLTPLTYNALIGACARNGDLEKALNLMSRMRQDGYRSDFVN 338

Query: 593  YSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAM 772
            YSL+IQSL RSNK+D  I+ KLY E+E++ +E+DGQL NDLIV FAKAG+P +AM FLAM
Sbjct: 339  YSLVIQSLNRSNKVDSPIMLKLYKEIESENVEIDGQLLNDLIVGFAKAGEPSQAMHFLAM 398

Query: 773  FEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGS 952
             +  GLSPKTATLV+VISALGN+GR VEAEA+FEEMKEGG++PRTRAYNALLKGYVK+ S
Sbjct: 399  VQASGLSPKTATLVSVISALGNAGRVVEAEAIFEEMKEGGLQPRTRAYNALLKGYVKAAS 458

Query: 953  LRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSR 1132
            L DAESIVS+MER G+SPDEHTYSLLIDAYANAGRWESARIVLKEME SNVQPNSYVFSR
Sbjct: 459  LEDAESIVSQMERSGISPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSR 518

Query: 1133 ILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
            ILASYRDRG+WQKSF VLREMR +GV PDRHFYNVMIDTFGK NCL+H ++TFERM S
Sbjct: 519  ILASYRDRGEWQKSFQVLREMRSSGVMPDRHFYNVMIDTFGKSNCLDHAMATFERMLS 576



 Score =  116 bits (290), Expect = 2e-23
 Identities = 72/305 (23%), Positives = 143/305 (46%), Gaps = 5/305 (1%)
 Frame = +2

Query: 407  LIHALGRSQKLYEA---FLLSQRHDLTPLT--YNALIGACTRNGDIEKALNLMGKMRRDG 571
            +I ALG + ++ EA   F   +   L P T  YNAL+    +   +E A +++ +M R G
Sbjct: 414  VISALGNAGRVVEAEAIFEEMKEGGLQPRTRAYNALLKGYVKAASLEDAESIVSQMERSG 473

Query: 572  FLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDR 751
               D   YSL+I +   + + +   +  +  E+EA  ++ +  + + ++ ++   G+  +
Sbjct: 474  ISPDEHTYSLLIDAYANAGRWESARI--VLKEMEASNVQPNSYVFSRILASYRDRGEWQK 531

Query: 752  AMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLK 931
            +   L      G+ P       +I   G S     A A FE M   G++P T  +N L+ 
Sbjct: 532  SFQVLREMRSSGVMPDRHFYNVMIDTFGKSNCLDHAMATFERMLSEGIQPDTVTWNTLID 591

Query: 932  GYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQP 1111
             + KSG    AE +  EM+  G +P   T++++I++     RW+  + ++ +M+   + P
Sbjct: 592  IHCKSGHHARAEELFEEMQESGCAPCATTFNIMINSLGEQERWDEVKGLMGKMQSQGLLP 651

Query: 1112 NSYVFSRILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTF 1291
            N   ++ ++  Y   G +  +   L  M+  G+ P    YN +I+ + +    E  ++ F
Sbjct: 652  NIVTYTTLVDIYGKSGRFNDAIECLEIMKSAGLKPSPTMYNALINAYAQRGLSELALNAF 711

Query: 1292 ERMKS 1306
              M++
Sbjct: 712  RVMRA 716



 Score =  109 bits (273), Expect = 2e-21
 Identities = 76/356 (21%), Positives = 160/356 (44%), Gaps = 7/356 (1%)
 Frame = +2

Query: 260  SYRAVPAPLWHSVLKSLTSSPSTLHTAYALVEWLQTHNLCFSYDLLYSILIHALGRSQKL 439
            S R    PL ++ L    +    L  A  L+  ++       + + YS++I +L RS K+
Sbjct: 294  SQRRTLTPLTYNALIGACARNGDLEKALNLMSRMRQDGYRSDF-VNYSLVIQSLNRSNKV 352

Query: 440  YEAFLL-------SQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYS 598
                +L       S+  ++     N LI    + G+  +A++ +  ++  G         
Sbjct: 353  DSPIMLKLYKEIESENVEIDGQLLNDLIVGFAKAGEPSQAMHFLAMVQASGLSPKTATLV 412

Query: 599  LIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFE 778
             +I +L  + ++       ++ E++   ++   +  N L+  + KA   + A   ++  E
Sbjct: 413  SVISALGNAGRVVEA--EAIFEEMKEGGLQPRTRAYNALLKGYVKAASLEDAESIVSQME 470

Query: 779  GQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLR 958
              G+SP   T   +I A  N+GR   A  V +EM+   V+P +  ++ +L  Y   G  +
Sbjct: 471  RSGISPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASYRDRGEWQ 530

Query: 959  DAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRIL 1138
             +  ++ EM   GV PD H Y+++ID +  +   + A    + M    +QP++  ++ ++
Sbjct: 531  KSFQVLREMRSSGVMPDRHFYNVMIDTFGKSNCLDHAMATFERMLSEGIQPDTVTWNTLI 590

Query: 1139 ASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
              +   G   ++  +  EM+ +G +P    +N+MI++ G+    + V     +M+S
Sbjct: 591  DIHCKSGHHARAEELFEEMQESGCAPCATTFNIMINSLGEQERWDEVKGLMGKMQS 646



 Score =  102 bits (253), Expect = 5e-19
 Identities = 77/307 (25%), Positives = 143/307 (46%), Gaps = 6/307 (1%)
 Frame = +2

Query: 398  YSILIHALGRSQKLYEAFLLSQRHDLTPLTYNA-----LIGACTRNGDIEKALNLMGKMR 562
            YS+LI A   + +   A ++ +  + + +  N+     ++ +    G+ +K+  ++ +MR
Sbjct: 481  YSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASYRDRGEWQKSFQVLREMR 540

Query: 563  RDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGD 742
              G + D   Y+++I +  +SN LD  +    +  + ++ I+ D    N LI    K+G 
Sbjct: 541  SSGVMPDRHFYNVMIDTFGKSNCLDHAMA--TFERMLSEGIQPDTVTWNTLIDIHCKSGH 598

Query: 743  PDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNA 922
              RA       +  G +P   T   +I++LG   R  E + +  +M+  G+ P    Y  
Sbjct: 599  HARAEELFEEMQESGCAPCATTFNIMINSLGEQERWDEVKGLMGKMQSQGLLPNIVTYTT 658

Query: 923  LLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESN 1102
            L+  Y KSG   DA   +  M+  G+ P    Y+ LI+AYA  G  E A    + M    
Sbjct: 659  LVDIYGKSGRFNDAIECLEIMKSAGLKPSPTMYNALINAYAQRGLSELALNAFRVMRADG 718

Query: 1103 VQPNSYVFSRILASY-RDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHV 1279
            ++P+    + ++ ++  DR D  ++FSVL+ M+ N V PD   Y  ++    + +    V
Sbjct: 719  LKPSLLALNSLINAFGEDRRD-AEAFSVLQYMKENDVKPDVVTYTTLMKALIRVDKFYKV 777

Query: 1280 VSTFERM 1300
               +E M
Sbjct: 778  PDVYEEM 784



 Score = 75.5 bits (184), Expect = 5e-11
 Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 2/207 (0%)
 Frame = +2

Query: 425  RSQKLYEAFLLSQRHDLTPL--TYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYS 598
            R+++L+E     Q     P   T+N +I +       ++   LMGKM+  G L + V Y+
Sbjct: 601  RAEELFEEM---QESGCAPCATTFNIMINSLGEQERWDEVKGLMGKMQSQGLLPNIVTYT 657

Query: 599  LIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFE 778
             ++    +S + +  I  +    +++  ++    + N LI A+A+ G  + A+    +  
Sbjct: 658  TLVDIYGKSGRFNDAI--ECLEIMKSAGLKPSPTMYNALINAYAQRGLSELALNAFRVMR 715

Query: 779  GQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLR 958
              GL P    L ++I+A G   R  EA +V + MKE  VKP    Y  L+K  ++     
Sbjct: 716  ADGLKPSLLALNSLINAFGEDRRDAEAFSVLQYMKENDVKPDVVTYTTLMKALIRVDKFY 775

Query: 959  DAESIVSEMERGGVSPDEHTYSLLIDA 1039
                +  EM    V+PD    ++L  A
Sbjct: 776  KVPDVYEEMIHSRVTPDRKARAMLRSA 802


>ref|XP_006346695.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum tuberosum]
          Length = 697

 Score =  567 bits (1461), Expect = e-159
 Identities = 277/352 (78%), Positives = 316/352 (89%)
 Frame = +2

Query: 248  RLVESYRAVPAPLWHSVLKSLTSSPSTLHTAYALVEWLQTHNLCFSYDLLYSILIHALGR 427
            RL ESYRAVPAPLWHS+LK L+S+PS++  AYALV WLQ HNLCFSY+LLYSILIHALGR
Sbjct: 109  RLAESYRAVPAPLWHSLLKGLSSTPSSISIAYALVIWLQKHNLCFSYELLYSILIHALGR 168

Query: 428  SQKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLII 607
            S+KLYEAFLLSQR  LTPLTYNALIGAC RNGD+EKALNLM +MRRDG+ SDYVNYSLII
Sbjct: 169  SEKLYEAFLLSQRQTLTPLTYNALIGACARNGDLEKALNLMCRMRRDGYQSDYVNYSLII 228

Query: 608  QSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQG 787
            QSL RSN +DL +LHK   E+EAD IELDGQL ND+IV FAKAGD DRA+ F+++ +G G
Sbjct: 229  QSLIRSNSIDLTMLHKFCYEIEADMIELDGQLLNDMIVGFAKAGDVDRALGFMSIVQGNG 288

Query: 788  LSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAE 967
            LSPKTAT+V +IS LGNSGRT EAEA+FEE+KEGG+KPRTRA+NALLKGYVK+GSL+DAE
Sbjct: 289  LSPKTATVVNLISELGNSGRTEEAEAIFEELKEGGLKPRTRAFNALLKGYVKTGSLKDAE 348

Query: 968  SIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASY 1147
             IVSEME  GV+PDEHTYSLLIDAY NAGRWESARIVLKEME +NVQPNS+VFSRILASY
Sbjct: 349  YIVSEMESSGVAPDEHTYSLLIDAYGNAGRWESARIVLKEMEANNVQPNSFVFSRILASY 408

Query: 1148 RDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMK 1303
            RDRG+WQ+SF VL+EM+ +GV+PDR FYN+MIDTFGKYNCL+H +STFERMK
Sbjct: 409  RDRGEWQRSFQVLKEMKNSGVNPDRQFYNIMIDTFGKYNCLDHAMSTFERMK 460



 Score =  115 bits (289), Expect = 3e-23
 Identities = 73/304 (24%), Positives = 140/304 (46%), Gaps = 5/304 (1%)
 Frame = +2

Query: 407  LIHALGRSQKLYEA---FLLSQRHDLTPLT--YNALIGACTRNGDIEKALNLMGKMRRDG 571
            LI  LG S +  EA   F   +   L P T  +NAL+    + G ++ A  ++ +M   G
Sbjct: 299  LISELGNSGRTEEAEAIFEELKEGGLKPRTRAFNALLKGYVKTGSLKDAEYIVSEMESSG 358

Query: 572  FLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDR 751
               D   YSL+I +   + + +   +  +  E+EA+ ++ +  + + ++ ++   G+  R
Sbjct: 359  VAPDEHTYSLLIDAYGNAGRWESARI--VLKEMEANNVQPNSFVFSRILASYRDRGEWQR 416

Query: 752  AMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLK 931
            +   L   +  G++P       +I   G       A + FE MK   ++P T  +N L+ 
Sbjct: 417  SFQVLKEMKNSGVNPDRQFYNIMIDTFGKYNCLDHAMSTFERMKLEEIEPDTVTWNTLID 476

Query: 932  GYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQP 1111
             + K G    AE +   M+  G SP   TY+++I+++    +WE  + +L +M+   + P
Sbjct: 477  CHSKHGHHNKAEELFETMQESGCSPCTTTYNIMINSFGELEKWEEVKCLLSKMQSQGLLP 536

Query: 1112 NSYVFSRILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTF 1291
            N   ++ ++  Y   G +  +   L  M+  G+ P    YN +I+ + +    E  V+ F
Sbjct: 537  NVVTYTTLINIYGQSGRFNDAIECLEVMKSAGLKPSSTMYNALINAYAQRGLSEQAVNAF 596

Query: 1292 ERMK 1303
              MK
Sbjct: 597  RIMK 600



 Score = 86.7 bits (213), Expect = 2e-14
 Identities = 71/315 (22%), Positives = 137/315 (43%), Gaps = 40/315 (12%)
 Frame = +2

Query: 398  YSILIHALGRSQKLYEAFLL---SQRHDLTP--LTYNALIGACTRNGDIEKALNLMGKMR 562
            YS+LI A G + +   A ++    + +++ P    ++ ++ +    G+ +++  ++ +M+
Sbjct: 366  YSLLIDAYGNAGRWESARIVLKEMEANNVQPNSFVFSRILASYRDRGEWQRSFQVLKEMK 425

Query: 563  RDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGD 742
              G   D   Y+++I +  + N LD  +    +  ++ + IE D    N LI   +K G 
Sbjct: 426  NSGVNPDRQFYNIMIDTFGKYNCLDHAM--STFERMKLEEIEPDTVTWNTLIDCHSKHGH 483

Query: 743  PDRA-----------------------------------MVFLAMFEGQGLSPKTATLVA 817
             ++A                                      L+  + QGL P   T   
Sbjct: 484  HNKAEELFETMQESGCSPCTTTYNIMINSFGELEKWEEVKCLLSKMQSQGLLPNVVTYTT 543

Query: 818  VISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAESIVSEMERGG 997
            +I+  G SGR  +A    E MK  G+KP +  YNAL+  Y + G    A +    M+  G
Sbjct: 544  LINIYGQSGRFNDAIECLEVMKSAGLKPSSTMYNALINAYAQRGLSEQAVNAFRIMKGDG 603

Query: 998  VSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASYRDRGDWQKSF 1177
            + P     + LI+A+    R   A  VLK ++E++++P+   ++ ++ +      +++  
Sbjct: 604  LKPSLLALNSLINAFGEDRRDAEAFAVLKYLKENDMKPDVVTYTTLMKTLIRVEKFERVP 663

Query: 1178 SVLREMRCNGVSPDR 1222
            +V  EM   G  PDR
Sbjct: 664  AVYEEMLLCGCIPDR 678



 Score = 75.9 bits (185), Expect = 4e-11
 Identities = 55/208 (26%), Positives = 94/208 (45%), Gaps = 2/208 (0%)
 Frame = +2

Query: 422  GRSQKLYEAFLLSQRHDLTPLT--YNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNY 595
            G   K  E F   Q    +P T  YN +I +       E+   L+ KM+  G L + V Y
Sbjct: 482  GHHNKAEELFETMQESGCSPCTTTYNIMINSFGELEKWEEVKCLLSKMQSQGLLPNVVTY 541

Query: 596  SLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMF 775
            + +I    +S + +  I  +    +++  ++    + N LI A+A+ G  ++A+    + 
Sbjct: 542  TTLINIYGQSGRFNDAI--ECLEVMKSAGLKPSSTMYNALINAYAQRGLSEQAVNAFRIM 599

Query: 776  EGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSL 955
            +G GL P    L ++I+A G   R  EA AV + +KE  +KP    Y  L+K  ++    
Sbjct: 600  KGDGLKPSLLALNSLINAFGEDRRDAEAFAVLKYLKENDMKPDVVTYTTLMKTLIRVEKF 659

Query: 956  RDAESIVSEMERGGVSPDEHTYSLLIDA 1039
                ++  EM   G  PD    ++L  A
Sbjct: 660  ERVPAVYEEMLLCGCIPDRKARAMLRSA 687


>gb|EXB56341.1| hypothetical protein L484_024883 [Morus notabilis]
          Length = 734

 Score =  566 bits (1459), Expect = e-159
 Identities = 279/350 (79%), Positives = 312/350 (89%)
 Frame = +2

Query: 251  LVESYRAVPAPLWHSVLKSLTSSPSTLHTAYALVEWLQTHNLCFSYDLLYSILIHALGRS 430
            L ESYRAVPA LWHS+LKSL S  S++  AYA+V WLQ HNLCFSY+LLYSILIHALGRS
Sbjct: 120  LAESYRAVPALLWHSLLKSLCSKSSSIGLAYAVVSWLQKHNLCFSYELLYSILIHALGRS 179

Query: 431  QKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLIIQ 610
            +KLYEAFLLSQR  LTPLTYNALIGAC RN D+EKALNLM +MR+DGF SD+VNYSLIIQ
Sbjct: 180  EKLYEAFLLSQRQTLTPLTYNALIGACARNDDLEKALNLMARMRQDGFPSDFVNYSLIIQ 239

Query: 611  SLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQGL 790
            SLTR NK+D  IL KLY E+E D+IELDGQL ND+IV FAKAGDP +AM FLA+ +  GL
Sbjct: 240  SLTRKNKIDSPILQKLYKEIECDKIELDGQLLNDIIVGFAKAGDPSQAMHFLAVVQAMGL 299

Query: 791  SPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAES 970
            SPKTATL AVISALGNSGR VEAEA+FEE+K+GG++PRTRAYNALLKGYVK+ SL+DAES
Sbjct: 300  SPKTATLTAVISALGNSGRIVEAEALFEEIKDGGLQPRTRAYNALLKGYVKASSLKDAES 359

Query: 971  IVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASYR 1150
            +VSEME  GVSPDEHTYSLLIDAYANAGRWESARIVLKEME SNVQPNSYVFSRILASYR
Sbjct: 360  VVSEMEMNGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASYR 419

Query: 1151 DRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERM 1300
            DRG+WQK+F VLREM+ +GV PDRHFYNVMIDTFGK+NCL+H ++TFERM
Sbjct: 420  DRGEWQKTFQVLREMKSSGVRPDRHFYNVMIDTFGKFNCLDHAMATFERM 469



 Score =  121 bits (304), Expect = 6e-25
 Identities = 72/304 (23%), Positives = 145/304 (47%), Gaps = 5/304 (1%)
 Frame = +2

Query: 407  LIHALGRSQKLYEAFLLSQR---HDLTPLT--YNALIGACTRNGDIEKALNLMGKMRRDG 571
            +I ALG S ++ EA  L +      L P T  YNAL+    +   ++ A +++ +M  +G
Sbjct: 309  VISALGNSGRIVEAEALFEEIKDGGLQPRTRAYNALLKGYVKASSLKDAESVVSEMEMNG 368

Query: 572  FLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDR 751
               D   YSL+I +   + + +   +  +  E+EA  ++ +  + + ++ ++   G+  +
Sbjct: 369  VSPDEHTYSLLIDAYANAGRWESARI--VLKEMEASNVQPNSYVFSRILASYRDRGEWQK 426

Query: 752  AMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLK 931
                L   +  G+ P       +I   G       A A FE M   G++P T  +N L+ 
Sbjct: 427  TFQVLREMKSSGVRPDRHFYNVMIDTFGKFNCLDHAMATFERMILDGIQPDTVTWNTLIN 486

Query: 932  GYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQP 1111
             + K+G    AE +  EM+  G  P   TY++LI+++    RW+  +++L +M+   + P
Sbjct: 487  CHCKAGRHERAEELFEEMQERGYPPCATTYNILINSFGEQERWDDVKVLLGKMQSQGLLP 546

Query: 1112 NSYVFSRILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTF 1291
            N   ++ ++  Y   G +  +   L++M+ +G+ P    YN +I+ + +    E  ++ F
Sbjct: 547  NVVTYTTLIDIYGQSGRFNDAMDCLQDMKTSGLKPSSTMYNALINAYAQRGLSEQALNAF 606

Query: 1292 ERMK 1303
              M+
Sbjct: 607  RLMR 610



 Score =  101 bits (252), Expect = 6e-19
 Identities = 74/309 (23%), Positives = 143/309 (46%), Gaps = 6/309 (1%)
 Frame = +2

Query: 398  YSILIHALGRSQKLYEAFLLSQRHDLTPLTYNA-----LIGACTRNGDIEKALNLMGKMR 562
            YS+LI A   + +   A ++ +  + + +  N+     ++ +    G+ +K   ++ +M+
Sbjct: 376  YSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASYRDRGEWQKTFQVLREMK 435

Query: 563  RDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGD 742
              G   D   Y+++I +  + N LD  +    +  +  D I+ D    N LI    KAG 
Sbjct: 436  SSGVRPDRHFYNVMIDTFGKFNCLDHAMA--TFERMILDGIQPDTVTWNTLINCHCKAGR 493

Query: 743  PDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNA 922
             +RA       + +G  P   T   +I++ G   R  + + +  +M+  G+ P    Y  
Sbjct: 494  HERAEELFEEMQERGYPPCATTYNILINSFGEQERWDDVKVLLGKMQSQGLLPNVVTYTT 553

Query: 923  LLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESN 1102
            L+  Y +SG   DA   + +M+  G+ P    Y+ LI+AYA  G  E A    + M    
Sbjct: 554  LIDIYGQSGRFNDAMDCLQDMKTSGLKPSSTMYNALINAYAQRGLSEQALNAFRLMRGDG 613

Query: 1103 VQPNSYVFSRILASY-RDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHV 1279
            ++P+    + ++ ++  DR D  ++F+VL+ M+ NG+ PD   Y  ++    + +  + V
Sbjct: 614  LKPSILALNSLINAFGEDRRD-AEAFAVLQYMKENGLKPDVVTYTTLMKALNRVDKFDKV 672

Query: 1280 VSTFERMKS 1306
               +E M S
Sbjct: 673  PVVYEEMIS 681



 Score = 99.8 bits (247), Expect = 2e-18
 Identities = 65/274 (23%), Positives = 127/274 (46%)
 Frame = +2

Query: 485  TYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYN 664
            T  A+I A   +G I +A  L  +++  G       Y+ +++   +++ L       + +
Sbjct: 305  TLTAVISALGNSGRIVEAEALFEEIKDGGLQPRTRAYNALLKGYVKASSLKDA--ESVVS 362

Query: 665  ELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQGLSPKTATLVAVISALGNSG 844
            E+E + +  D    + LI A+A AG  + A + L   E   + P +     ++++  + G
Sbjct: 363  EMEMNGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASYRDRG 422

Query: 845  RTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYS 1024
               +   V  EMK  GV+P    YN ++  + K   L  A +    M   G+ PD  T++
Sbjct: 423  EWQKTFQVLREMKSSGVRPDRHFYNVMIDTFGKFNCLDHAMATFERMILDGIQPDTVTWN 482

Query: 1025 LLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASYRDRGDWQKSFSVLREMRCN 1204
             LI+ +  AGR E A  + +EM+E    P +  ++ ++ S+ ++  W     +L +M+  
Sbjct: 483  TLINCHCKAGRHERAEELFEEMQERGYPPCATTYNILINSFGEQERWDDVKVLLGKMQSQ 542

Query: 1205 GVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
            G+ P+   Y  +ID +G+       +   + MK+
Sbjct: 543  GLLPNVVTYTTLIDIYGQSGRFNDAMDCLQDMKT 576



 Score = 90.5 bits (223), Expect = 1e-15
 Identities = 63/245 (25%), Positives = 110/245 (44%)
 Frame = +2

Query: 488  YNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNE 667
            YN +I    +   ++ A+    +M  DG   D V ++ +I    ++ + +     +L+ E
Sbjct: 446  YNVMIDTFGKFNCLDHAMATFERMILDGIQPDTVTWNTLINCHCKAGRHERA--EELFEE 503

Query: 668  LEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGR 847
            ++           N LI +F +    D   V L   + QGL P   T   +I   G SGR
Sbjct: 504  MQERGYPPCATTYNILINSFGEQERWDDVKVLLGKMQSQGLLPNVVTYTTLIDIYGQSGR 563

Query: 848  TVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSL 1027
              +A    ++MK  G+KP +  YNAL+  Y + G    A +    M   G+ P     + 
Sbjct: 564  FNDAMDCLQDMKTSGLKPSSTMYNALINAYAQRGLSEQALNAFRLMRGDGLKPSILALNS 623

Query: 1028 LIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASYRDRGDWQKSFSVLREMRCNG 1207
            LI+A+    R   A  VL+ M+E+ ++P+   ++ ++ +      + K   V  EM  +G
Sbjct: 624  LINAFGEDRRDAEAFAVLQYMKENGLKPDVVTYTTLMKALNRVDKFDKVPVVYEEMISSG 683

Query: 1208 VSPDR 1222
             +PDR
Sbjct: 684  CTPDR 688



 Score = 82.4 bits (202), Expect = 4e-13
 Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 2/208 (0%)
 Frame = +2

Query: 422  GRSQKLYEAFLLSQRHDLTPL--TYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNY 595
            GR ++  E F   Q     P   TYN LI +       +    L+GKM+  G L + V Y
Sbjct: 492  GRHERAEELFEEMQERGYPPCATTYNILINSFGEQERWDDVKVLLGKMQSQGLLPNVVTY 551

Query: 596  SLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMF 775
            + +I    +S + +  +      +++   ++    + N LI A+A+ G  ++A+    + 
Sbjct: 552  TTLIDIYGQSGRFNDAM--DCLQDMKTSGLKPSSTMYNALINAYAQRGLSEQALNAFRLM 609

Query: 776  EGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSL 955
             G GL P    L ++I+A G   R  EA AV + MKE G+KP    Y  L+K   +    
Sbjct: 610  RGDGLKPSILALNSLINAFGEDRRDAEAFAVLQYMKENGLKPDVVTYTTLMKALNRVDKF 669

Query: 956  RDAESIVSEMERGGVSPDEHTYSLLIDA 1039
                 +  EM   G +PD     +L  A
Sbjct: 670  DKVPVVYEEMISSGCTPDRKAREMLRSA 697


>ref|XP_007225185.1| hypothetical protein PRUPE_ppa002191mg [Prunus persica]
            gi|462422121|gb|EMJ26384.1| hypothetical protein
            PRUPE_ppa002191mg [Prunus persica]
          Length = 703

 Score =  562 bits (1449), Expect = e-157
 Identities = 278/357 (77%), Positives = 318/357 (89%), Gaps = 1/357 (0%)
 Frame = +2

Query: 239  ADRRLVESYRAVPAPLWHSVLKSLTSSPST-LHTAYALVEWLQTHNLCFSYDLLYSILIH 415
            A+ +L ESYRAVPAPLWHS+LKSL SS S+ +  AYA+V WLQ HNLCFSY+LLYSILIH
Sbjct: 112  AEFQLAESYRAVPAPLWHSLLKSLCSSSSSDIQLAYAVVSWLQKHNLCFSYELLYSILIH 171

Query: 416  ALGRSQKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNY 595
            ALGRS+KLYEAFLLSQR  LTPLTYNALIGAC RNGD+EKAL+LM +MR+DG+ SD+VNY
Sbjct: 172  ALGRSEKLYEAFLLSQRQSLTPLTYNALIGACARNGDLEKALHLMSRMRQDGYRSDFVNY 231

Query: 596  SLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMF 775
            SLIIQSL+RSNK+D  I+ KLY E+E++ IE+DGQL ND+I  FAKAG+P +AM  LAM 
Sbjct: 232  SLIIQSLSRSNKIDSPIMLKLYREIESESIEIDGQLYNDIIAGFAKAGEPTQAMHLLAMV 291

Query: 776  EGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSL 955
            +  GLSPKTATLVA+ISALGN GR VEAEA+FEEMKEGG++PRTRAYNALLKGYVK+  L
Sbjct: 292  QATGLSPKTATLVALISALGNCGRVVEAEAIFEEMKEGGLQPRTRAYNALLKGYVKAAQL 351

Query: 956  RDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRI 1135
            +DAESIVS+ME+ G+SPDEHTYSLLIDAYANAGRWESARIVLKEME SNVQPNSYVFSRI
Sbjct: 352  KDAESIVSQMEKSGISPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRI 411

Query: 1136 LASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
            LASYRDRG+WQKSF VLREM+ +GV PDRHFYNVMIDTFGK NCL+HV++TFERM S
Sbjct: 412  LASYRDRGEWQKSFQVLREMKSSGVRPDRHFYNVMIDTFGKSNCLDHVMATFERMLS 468



 Score =  117 bits (293), Expect = 1e-23
 Identities = 72/305 (23%), Positives = 143/305 (46%), Gaps = 5/305 (1%)
 Frame = +2

Query: 407  LIHALGRSQKLYEA---FLLSQRHDLTPLT--YNALIGACTRNGDIEKALNLMGKMRRDG 571
            LI ALG   ++ EA   F   +   L P T  YNAL+    +   ++ A +++ +M + G
Sbjct: 306  LISALGNCGRVVEAEAIFEEMKEGGLQPRTRAYNALLKGYVKAAQLKDAESIVSQMEKSG 365

Query: 572  FLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDR 751
               D   YSL+I +   + + +   +  +  E+EA  ++ +  + + ++ ++   G+  +
Sbjct: 366  ISPDEHTYSLLIDAYANAGRWESARI--VLKEMEASNVQPNSYVFSRILASYRDRGEWQK 423

Query: 752  AMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLK 931
            +   L   +  G+ P       +I   G S       A FE M   G++P T  +N L+ 
Sbjct: 424  SFQVLREMKSSGVRPDRHFYNVMIDTFGKSNCLDHVMATFERMLSEGIQPDTVTWNTLID 483

Query: 932  GYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQP 1111
             + KSG  + AE +  EM + G +P   TY+++I+++    RW   + +L +M+   + P
Sbjct: 484  CHCKSGHHKRAEELFEEMHQSGCAPCATTYNIMINSFGEQQRWVEVKGLLGKMQAQGLLP 543

Query: 1112 NSYVFSRILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTF 1291
            N   ++ ++  Y   G +  +   L  M+  G+ P    YN +I+ + +    E  ++ F
Sbjct: 544  NIVTYTTLVDIYGKSGRFNDAIECLEVMKSAGLKPSPTMYNALINAYAQRGLSEQALNAF 603

Query: 1292 ERMKS 1306
              M++
Sbjct: 604  RVMRA 608



 Score =  112 bits (281), Expect = 3e-22
 Identities = 67/294 (22%), Positives = 139/294 (47%), Gaps = 7/294 (2%)
 Frame = +2

Query: 398  YSILIHALGRSQKLYEAFLL-------SQRHDLTPLTYNALIGACTRNGDIEKALNLMGK 556
            YS++I +L RS K+    +L       S+  ++    YN +I    + G+  +A++L+  
Sbjct: 231  YSLIIQSLSRSNKIDSPIMLKLYREIESESIEIDGQLYNDIIAGFAKAGEPTQAMHLLAM 290

Query: 557  MRRDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKA 736
            ++  G          +I +L    ++       ++ E++   ++   +  N L+  + KA
Sbjct: 291  VQATGLSPKTATLVALISALGNCGRVVEA--EAIFEEMKEGGLQPRTRAYNALLKGYVKA 348

Query: 737  GDPDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAY 916
                 A   ++  E  G+SP   T   +I A  N+GR   A  V +EM+   V+P +  +
Sbjct: 349  AQLKDAESIVSQMEKSGISPDEHTYSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVF 408

Query: 917  NALLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEE 1096
            + +L  Y   G  + +  ++ EM+  GV PD H Y+++ID +  +   +      + M  
Sbjct: 409  SRILASYRDRGEWQKSFQVLREMKSSGVRPDRHFYNVMIDTFGKSNCLDHVMATFERMLS 468

Query: 1097 SNVQPNSYVFSRILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGK 1258
              +QP++  ++ ++  +   G  +++  +  EM  +G +P    YN+MI++FG+
Sbjct: 469  EGIQPDTVTWNTLIDCHCKSGHHKRAEELFEEMHQSGCAPCATTYNIMINSFGE 522



 Score =  101 bits (251), Expect = 8e-19
 Identities = 76/307 (24%), Positives = 143/307 (46%), Gaps = 6/307 (1%)
 Frame = +2

Query: 398  YSILIHALGRSQKLYEAFLLSQRHDLTPLTYNA-----LIGACTRNGDIEKALNLMGKMR 562
            YS+LI A   + +   A ++ +  + + +  N+     ++ +    G+ +K+  ++ +M+
Sbjct: 373  YSLLIDAYANAGRWESARIVLKEMEASNVQPNSYVFSRILASYRDRGEWQKSFQVLREMK 432

Query: 563  RDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGD 742
              G   D   Y+++I +  +SN LD   +   +  + ++ I+ D    N LI    K+G 
Sbjct: 433  SSGVRPDRHFYNVMIDTFGKSNCLDH--VMATFERMLSEGIQPDTVTWNTLIDCHCKSGH 490

Query: 743  PDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNA 922
              RA          G +P   T   +I++ G   R VE + +  +M+  G+ P    Y  
Sbjct: 491  HKRAEELFEEMHQSGCAPCATTYNIMINSFGEQQRWVEVKGLLGKMQAQGLLPNIVTYTT 550

Query: 923  LLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESN 1102
            L+  Y KSG   DA   +  M+  G+ P    Y+ LI+AYA  G  E A    + M    
Sbjct: 551  LVDIYGKSGRFNDAIECLEVMKSAGLKPSPTMYNALINAYAQRGLSEQALNAFRVMRADG 610

Query: 1103 VQPNSYVFSRILASY-RDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHV 1279
            ++P+    + ++ ++  DR D  ++FSVL+ M+ N + PD   Y  ++ T  + +    V
Sbjct: 611  LKPSLLALNSLINAFGEDRRD-AEAFSVLQYMKENDLKPDVVTYTTLMKTLIRVDKFYKV 669

Query: 1280 VSTFERM 1300
             + +E M
Sbjct: 670  PAVYEEM 676



 Score = 70.9 bits (172), Expect = 1e-09
 Identities = 46/185 (24%), Positives = 85/185 (45%)
 Frame = +2

Query: 485  TYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYN 664
            TYN +I +        +   L+GKM+  G L + V Y+ ++    +S + +  I  +   
Sbjct: 512  TYNIMINSFGEQQRWVEVKGLLGKMQAQGLLPNIVTYTTLVDIYGKSGRFNDAI--ECLE 569

Query: 665  ELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQGLSPKTATLVAVISALGNSG 844
             +++  ++    + N LI A+A+ G  ++A+    +    GL P    L ++I+A G   
Sbjct: 570  VMKSAGLKPSPTMYNALINAYAQRGLSEQALNAFRVMRADGLKPSLLALNSLINAFGEDR 629

Query: 845  RTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYS 1024
            R  EA +V + MKE  +KP    Y  L+K  ++        ++  EM     +PD    +
Sbjct: 630  RDAEAFSVLQYMKENDLKPDVVTYTTLMKTLIRVDKFYKVPAVYEEMILSRCTPDRKARA 689

Query: 1025 LLIDA 1039
            +L  A
Sbjct: 690  MLRSA 694


>ref|XP_004244963.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Solanum lycopersicum]
          Length = 699

 Score =  562 bits (1448), Expect = e-157
 Identities = 274/352 (77%), Positives = 315/352 (89%)
 Frame = +2

Query: 248  RLVESYRAVPAPLWHSVLKSLTSSPSTLHTAYALVEWLQTHNLCFSYDLLYSILIHALGR 427
            RL ESYRAVPAPLWHS+LK L+S+PS++  AYALV WLQ HNLC+SY+LLYSILIHALGR
Sbjct: 111  RLAESYRAVPAPLWHSLLKDLSSTPSSISIAYALVIWLQKHNLCYSYELLYSILIHALGR 170

Query: 428  SQKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLII 607
            S+KLYEAFLLSQR  LTPLTYNALIGAC RNGD+EKALNLM +MRRDG+ SDYVNYSLII
Sbjct: 171  SEKLYEAFLLSQRQTLTPLTYNALIGACARNGDLEKALNLMCRMRRDGYQSDYVNYSLII 230

Query: 608  QSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQG 787
            QSL RSN +DL +LHK   E+EAD IELDGQL ND+IV FAKAGD D A+ F+++ +G G
Sbjct: 231  QSLIRSNSIDLTMLHKFCYEIEADMIELDGQLLNDMIVGFAKAGDVDTALGFMSVVQGNG 290

Query: 788  LSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAE 967
            LSPK AT+V +IS LGNSGRT EAEA+FEE+KEGG+KPRTRA+N+LLKGYVK+GSL+DAE
Sbjct: 291  LSPKIATVVNLISELGNSGRTDEAEAIFEELKEGGLKPRTRAFNSLLKGYVKTGSLKDAE 350

Query: 968  SIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASY 1147
             IVSEMER GV+PDEHTYSLLIDAY NAGRWESARIVLKEME +NVQPNS+VFSRILASY
Sbjct: 351  YIVSEMERSGVAPDEHTYSLLIDAYGNAGRWESARIVLKEMEANNVQPNSFVFSRILASY 410

Query: 1148 RDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMK 1303
            RDRG+WQ+SF VL+EM+ +GV+PDR FYN+MIDTFGKYNCL+H +STFERMK
Sbjct: 411  RDRGEWQRSFQVLKEMKNSGVNPDRQFYNIMIDTFGKYNCLDHAMSTFERMK 462



 Score =  115 bits (287), Expect = 6e-23
 Identities = 73/304 (24%), Positives = 141/304 (46%), Gaps = 5/304 (1%)
 Frame = +2

Query: 407  LIHALGRSQKLYEA---FLLSQRHDLTPLT--YNALIGACTRNGDIEKALNLMGKMRRDG 571
            LI  LG S +  EA   F   +   L P T  +N+L+    + G ++ A  ++ +M R G
Sbjct: 301  LISELGNSGRTDEAEAIFEELKEGGLKPRTRAFNSLLKGYVKTGSLKDAEYIVSEMERSG 360

Query: 572  FLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDR 751
               D   YSL+I +   + + +   +  +  E+EA+ ++ +  + + ++ ++   G+  R
Sbjct: 361  VAPDEHTYSLLIDAYGNAGRWESARI--VLKEMEANNVQPNSFVFSRILASYRDRGEWQR 418

Query: 752  AMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLK 931
            +   L   +  G++P       +I   G       A + FE MK   ++P T  +N L+ 
Sbjct: 419  SFQVLKEMKNSGVNPDRQFYNIMIDTFGKYNCLDHAMSTFERMKLEEIEPDTVTWNTLID 478

Query: 932  GYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQP 1111
             + K G    AE +   M+  G SP   TY+++I+++    +WE  + +L +M+   + P
Sbjct: 479  CHSKHGHHNKAEELFEVMQESGCSPCTTTYNIMINSFGELEKWEEVKGLLSKMQSQGLLP 538

Query: 1112 NSYVFSRILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTF 1291
            N   ++ ++  Y   G +  +   L  M+  G+ P    YN +I+ + +    E  V+ F
Sbjct: 539  NVVTYTTLINIYGQSGRFNDAIECLEVMKSAGLKPSSTMYNALINAYAQRGLSEQAVNAF 598

Query: 1292 ERMK 1303
              MK
Sbjct: 599  RIMK 602



 Score = 89.0 bits (219), Expect = 4e-15
 Identities = 73/315 (23%), Positives = 140/315 (44%), Gaps = 40/315 (12%)
 Frame = +2

Query: 398  YSILIHALGRSQKLYEAFLL---SQRHDLTP--LTYNALIGACTRNGDIEKALNLMGKMR 562
            YS+LI A G + +   A ++    + +++ P    ++ ++ +    G+ +++  ++ +M+
Sbjct: 368  YSLLIDAYGNAGRWESARIVLKEMEANNVQPNSFVFSRILASYRDRGEWQRSFQVLKEMK 427

Query: 563  RDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGD 742
              G   D   Y+++I +  + N LD  +    +  ++ + IE D    N LI   +K G 
Sbjct: 428  NSGVNPDRQFYNIMIDTFGKYNCLDHAM--STFERMKLEEIEPDTVTWNTLIDCHSKHGH 485

Query: 743  PDRA---------------------MV--------------FLAMFEGQGLSPKTATLVA 817
             ++A                     M+               L+  + QGL P   T   
Sbjct: 486  HNKAEELFEVMQESGCSPCTTTYNIMINSFGELEKWEEVKGLLSKMQSQGLLPNVVTYTT 545

Query: 818  VISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAESIVSEMERGG 997
            +I+  G SGR  +A    E MK  G+KP +  YNAL+  Y + G    A +    M+  G
Sbjct: 546  LINIYGQSGRFNDAIECLEVMKSAGLKPSSTMYNALINAYAQRGLSEQAVNAFRIMKGDG 605

Query: 998  VSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASYRDRGDWQKSF 1177
            + P     + LI+A+    R   A  VLK M+E++++P+   ++ ++ +      +++  
Sbjct: 606  LKPSLLALNSLINAFGEDRRDAEAFAVLKYMKENDMKPDVVTYTTLMKTLIRVEKFERVP 665

Query: 1178 SVLREMRCNGVSPDR 1222
            +V  EM  +G  PDR
Sbjct: 666  AVYEEMLLSGCIPDR 680



 Score = 80.1 bits (196), Expect = 2e-12
 Identities = 56/208 (26%), Positives = 95/208 (45%), Gaps = 2/208 (0%)
 Frame = +2

Query: 422  GRSQKLYEAFLLSQRHDLTPLT--YNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNY 595
            G   K  E F + Q    +P T  YN +I +       E+   L+ KM+  G L + V Y
Sbjct: 484  GHHNKAEELFEVMQESGCSPCTTTYNIMINSFGELEKWEEVKGLLSKMQSQGLLPNVVTY 543

Query: 596  SLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMF 775
            + +I    +S + +  I  +    +++  ++    + N LI A+A+ G  ++A+    + 
Sbjct: 544  TTLINIYGQSGRFNDAI--ECLEVMKSAGLKPSSTMYNALINAYAQRGLSEQAVNAFRIM 601

Query: 776  EGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSL 955
            +G GL P    L ++I+A G   R  EA AV + MKE  +KP    Y  L+K  ++    
Sbjct: 602  KGDGLKPSLLALNSLINAFGEDRRDAEAFAVLKYMKENDMKPDVVTYTTLMKTLIRVEKF 661

Query: 956  RDAESIVSEMERGGVSPDEHTYSLLIDA 1039
                ++  EM   G  PD    ++L  A
Sbjct: 662  ERVPAVYEEMLLSGCIPDRKARAMLRSA 689


>gb|EYU17498.1| hypothetical protein MIMGU_mgv1a002335mg [Mimulus guttatus]
          Length = 687

 Score =  553 bits (1425), Expect = e-155
 Identities = 267/356 (75%), Positives = 315/356 (88%)
 Frame = +2

Query: 239  ADRRLVESYRAVPAPLWHSVLKSLTSSPSTLHTAYALVEWLQTHNLCFSYDLLYSILIHA 418
            A+ RL ESY AVPAPLWHS++K+L+S+P++  TAY+LV WLQ HNLCFSY+LLYSILIHA
Sbjct: 96   AELRLAESYGAVPAPLWHSLIKNLSSTPASFSTAYSLVTWLQRHNLCFSYELLYSILIHA 155

Query: 419  LGRSQKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYS 598
            LGR+++LYEAFLLSQR  LTPLTYNALIGAC RNGD+EKALNLM +MRRDG+ SD+VNYS
Sbjct: 156  LGRNEQLYEAFLLSQRQSLTPLTYNALIGACARNGDLEKALNLMERMRRDGYQSDFVNYS 215

Query: 599  LIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFE 778
            L+IQSL R+N +D+ IL KLY E+EADRIELDGQLSND+I  FAKAGD DRA+ FL + +
Sbjct: 216  LVIQSLMRNNIVDVAILEKLYGEIEADRIELDGQLSNDMIAGFAKAGDIDRALYFLGVMQ 275

Query: 779  GQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLR 958
            G GLSPKT+T+V+V++ LG  GR  EAEAVFEE+KEGG+KPRTRAYNALLKGYVK G+L+
Sbjct: 276  GSGLSPKTSTVVSVVNELGILGRVEEAEAVFEELKEGGLKPRTRAYNALLKGYVKVGALK 335

Query: 959  DAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRIL 1138
            DAE +VSEME+ GV PDEHTYSLLIDAY NAGRWESARIVLKEME ++V+PNSYVFSRIL
Sbjct: 336  DAEYVVSEMEKSGVLPDEHTYSLLIDAYGNAGRWESARIVLKEMEANDVKPNSYVFSRIL 395

Query: 1139 ASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
            ASYRDRG+WQ+SF VL+EM+  GV PDR FYNVM+DTFGKYNCL+H++STF RMKS
Sbjct: 396  ASYRDRGEWQRSFQVLKEMKNCGVVPDRQFYNVMMDTFGKYNCLDHMISTFRRMKS 451



 Score =  111 bits (277), Expect = 8e-22
 Identities = 70/297 (23%), Positives = 135/297 (45%), Gaps = 2/297 (0%)
 Frame = +2

Query: 419  LGRSQKLYEAFLLSQRHDLTPLT--YNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVN 592
            LGR ++    F   +   L P T  YNAL+    + G ++ A  ++ +M + G L D   
Sbjct: 296  LGRVEEAEAVFEELKEGGLKPRTRAYNALLKGYVKVGALKDAEYVVSEMEKSGVLPDEHT 355

Query: 593  YSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAM 772
            YSL+I +   + + +   +  +  E+EA+ ++ +  + + ++ ++   G+  R+   L  
Sbjct: 356  YSLLIDAYGNAGRWESARI--VLKEMEANDVKPNSYVFSRILASYRDRGEWQRSFQVLKE 413

Query: 773  FEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGS 952
             +  G+ P       ++   G         + F  MK  G++P T  +N L+  + K G 
Sbjct: 414  MKNCGVVPDRQFYNVMMDTFGKYNCLDHMISTFRRMKSEGIEPDTVTWNTLIDCHCKQGR 473

Query: 953  LRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSR 1132
               +E +  EM   G  P   TY+++I+A     RWE  R +L +M+   + PN   ++ 
Sbjct: 474  FGKSEELFEEMRESGCVPCTTTYNIMINALGVQERWEEVRELLGKMQSEGLLPNVVTYTT 533

Query: 1133 ILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMK 1303
            ++  Y   G +  +   L  M+  G+ P    YN +I+ + +    E  V+ F  M+
Sbjct: 534  LVDIYGKSGRFNDAIECLEAMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMR 590



 Score =  108 bits (269), Expect = 7e-21
 Identities = 84/357 (23%), Positives = 160/357 (44%), Gaps = 8/357 (2%)
 Frame = +2

Query: 260  SYRAVPAPLWHSVLKSLTSSPSTLHTAYALVEWLQTHNLCFSYDLLYSILIHALGRS--- 430
            S R    PL ++ L    +    L  A  L+E ++       + + YS++I +L R+   
Sbjct: 169  SQRQSLTPLTYNALIGACARNGDLEKALNLMERMRRDGYQSDF-VNYSLVIQSLMRNNIV 227

Query: 431  -----QKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNY 595
                 +KLY   + + R +L     N +I    + GDI++AL  +G M+  G        
Sbjct: 228  DVAILEKLYGE-IEADRIELDGQLSNDMIAGFAKAGDIDRALYFLGVMQGSGLSPKTSTV 286

Query: 596  SLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMF 775
              ++  L    +++      ++ EL+   ++   +  N L+  + K G    A   ++  
Sbjct: 287  VSVVNELGILGRVEEA--EAVFEELKEGGLKPRTRAYNALLKGYVKVGALKDAEYVVSEM 344

Query: 776  EGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSL 955
            E  G+ P   T   +I A GN+GR   A  V +EM+   VKP +  ++ +L  Y   G  
Sbjct: 345  EKSGVLPDEHTYSLLIDAYGNAGRWESARIVLKEMEANDVKPNSYVFSRILASYRDRGEW 404

Query: 956  RDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRI 1135
            + +  ++ EM+  GV PD   Y++++D +      +      + M+   ++P++  ++ +
Sbjct: 405  QRSFQVLKEMKNCGVVPDRQFYNVMMDTFGKYNCLDHMISTFRRMKSEGIEPDTVTWNTL 464

Query: 1136 LASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
            +  +  +G + KS  +  EMR +G  P    YN+MI+  G     E V     +M+S
Sbjct: 465  IDCHCKQGRFGKSEELFEEMRESGCVPCTTTYNIMINALGVQERWEEVRELLGKMQS 521



 Score =  101 bits (251), Expect = 8e-19
 Identities = 78/307 (25%), Positives = 144/307 (46%), Gaps = 6/307 (1%)
 Frame = +2

Query: 398  YSILIHALGRSQKLYEAFLL---SQRHDLTPLTY--NALIGACTRNGDIEKALNLMGKMR 562
            YS+LI A G + +   A ++    + +D+ P +Y  + ++ +    G+ +++  ++ +M+
Sbjct: 356  YSLLIDAYGNAGRWESARIVLKEMEANDVKPNSYVFSRILASYRDRGEWQRSFQVLKEMK 415

Query: 563  RDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGD 742
              G + D   Y++++ +  + N LD  I    +  ++++ IE D    N LI    K G 
Sbjct: 416  NCGVVPDRQFYNVMMDTFGKYNCLDHMI--STFRRMKSEGIEPDTVTWNTLIDCHCKQGR 473

Query: 743  PDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNA 922
              ++          G  P T T   +I+ALG   R  E   +  +M+  G+ P    Y  
Sbjct: 474  FGKSEELFEEMRESGCVPCTTTYNIMINALGVQERWEEVRELLGKMQSEGLLPNVVTYTT 533

Query: 923  LLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESN 1102
            L+  Y KSG   DA   +  M+  G+ P    Y+ LI+AYA  G  E A    + M    
Sbjct: 534  LVDIYGKSGRFNDAIECLEAMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMRGDG 593

Query: 1103 VQPNSYVFSRILASY-RDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHV 1279
            ++P+    + ++ ++  DR D  ++F+VL+ M+ N + PD   Y  ++    +    E V
Sbjct: 594  LKPSILAMNSLVNAFGEDRRD-SEAFAVLQYMKDNDLKPDVVTYTTLMKALIRVEKYEKV 652

Query: 1280 VSTFERM 1300
             + FE M
Sbjct: 653  PAVFEEM 659



 Score = 82.0 bits (201), Expect = 5e-13
 Identities = 54/206 (26%), Positives = 99/206 (48%)
 Frame = +2

Query: 422  GRSQKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSL 601
            G+S++L+E    S     T  TYN +I A       E+   L+GKM+ +G L + V Y+ 
Sbjct: 475  GKSEELFEEMRESGCVPCTT-TYNIMINALGVQERWEEVRELLGKMQSEGLLPNVVTYTT 533

Query: 602  IIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEG 781
            ++    +S + +  I  +    +++  ++    + N LI A+A+ G  ++A+    +  G
Sbjct: 534  LVDIYGKSGRFNDAI--ECLEAMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFRVMRG 591

Query: 782  QGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRD 961
             GL P    + ++++A G   R  EA AV + MK+  +KP    Y  L+K  ++      
Sbjct: 592  DGLKPSILAMNSLVNAFGEDRRDSEAFAVLQYMKDNDLKPDVVTYTTLMKALIRVEKYEK 651

Query: 962  AESIVSEMERGGVSPDEHTYSLLIDA 1039
              ++  EM   G +PD    ++L  A
Sbjct: 652  VPAVFEEMLLSGCAPDRKARAMLRSA 677


>ref|XP_003527377.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Glycine max]
          Length = 696

 Score =  550 bits (1418), Expect = e-154
 Identities = 269/353 (76%), Positives = 310/353 (87%)
 Frame = +2

Query: 248  RLVESYRAVPAPLWHSVLKSLTSSPSTLHTAYALVEWLQTHNLCFSYDLLYSILIHALGR 427
            +L ESYRAVPAPLWH++LKSL SS S++  AYA+V WLQ HNLCFSY+LLYSILI+ALGR
Sbjct: 108  QLAESYRAVPAPLWHALLKSLCSSSSSIALAYAVVSWLQKHNLCFSYELLYSILINALGR 167

Query: 428  SQKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLII 607
            S+KLYEAFLLSQR  LTPLTYNALIGAC RNGD+EKALNLM KMRRDG+  D+VNYS II
Sbjct: 168  SEKLYEAFLLSQRQVLTPLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSII 227

Query: 608  QSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQG 787
            Q LTRSNK+D  IL KLY E+E D+IE+DG L ND+I+ F+KAGDP RAM FLAM +  G
Sbjct: 228  QYLTRSNKIDSPILQKLYTEIETDKIEIDGHLMNDIILGFSKAGDPTRAMRFLAMAQSNG 287

Query: 788  LSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAE 967
            L+PK +TLVAVI ALGNSGRT EAEA+FEE++E G +PRTRAYNALLKGYVK+GSL+DAE
Sbjct: 288  LNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAE 347

Query: 968  SIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASY 1147
             +VSEME+ GV PDE TYSLLIDAYA+AGRWESARIVLKEME SNV+PNSYV+SRILASY
Sbjct: 348  FVVSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASY 407

Query: 1148 RDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
            RD+G+WQKSF VL++M+ NGV PDRHFYNVMIDTFGKYNCL+H ++TFERM S
Sbjct: 408  RDKGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLS 460



 Score =  120 bits (301), Expect = 1e-24
 Identities = 76/303 (25%), Positives = 141/303 (46%), Gaps = 5/303 (1%)
 Frame = +2

Query: 407  LIHALGRSQKLYEAFLLSQR---HDLTPLT--YNALIGACTRNGDIEKALNLMGKMRRDG 571
            +I ALG S + +EA  L +    +   P T  YNAL+    + G ++ A  ++ +M + G
Sbjct: 298  VILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKAG 357

Query: 572  FLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDR 751
               D   YSL+I +   + + +   +  +  E+EA  +E +  + + ++ ++   G+  +
Sbjct: 358  VKPDEQTYSLLIDAYAHAGRWESARI--VLKEMEASNVEPNSYVYSRILASYRDKGEWQK 415

Query: 752  AMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLK 931
            +   L   +  G+ P       +I   G       A A FE M   G++P T  +N L+ 
Sbjct: 416  SFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLIN 475

Query: 932  GYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQP 1111
             + KSG    AE +  EM++ G SP   TY+++I++     RWE   + L +M+   + P
Sbjct: 476  CHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLP 535

Query: 1112 NSYVFSRILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTF 1291
            NS  ++ ++  Y   G +  +   L  ++  G  P    YN +I+ + +    E  V+ F
Sbjct: 536  NSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAF 595

Query: 1292 ERM 1300
              M
Sbjct: 596  RLM 598



 Score = 99.4 bits (246), Expect = 3e-18
 Identities = 79/357 (22%), Positives = 153/357 (42%), Gaps = 8/357 (2%)
 Frame = +2

Query: 260  SYRAVPAPLWHSVLKSLTSSPSTLHTAYALVEWLQTHNLCFSYDLL-YSILIHALGRSQK 436
            S R V  PL ++ L    +    +  A  L+  ++     +  D + YS +I  L RS K
Sbjct: 178  SQRQVLTPLTYNALIGACARNGDVEKALNLMSKMRRDG--YQPDFVNYSSIIQYLTRSNK 235

Query: 437  LYEAFLL-------SQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNY 595
            +    L        + + ++     N +I   ++ GD  +A+  +   + +G        
Sbjct: 236  IDSPILQKLYTEIETDKIEIDGHLMNDIILGFSKAGDPTRAMRFLAMAQSNGLNPKPSTL 295

Query: 596  SLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMF 775
              +I +L  S +        L+ E+  +  E   +  N L+  + K G    A   ++  
Sbjct: 296  VAVILALGNSGRTHEA--EALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEFVVSEM 353

Query: 776  EGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSL 955
            E  G+ P   T   +I A  ++GR   A  V +EM+   V+P +  Y+ +L  Y   G  
Sbjct: 354  EKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEW 413

Query: 956  RDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRI 1135
            + +  ++ +M+  GV PD H Y+++ID +      + A    + M    ++P++  ++ +
Sbjct: 414  QKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTL 473

Query: 1136 LASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
            +  +   G    +  +  EM+  G SP    YN+MI++ G+    E V     +M+S
Sbjct: 474  INCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQS 530



 Score = 94.7 bits (234), Expect = 8e-17
 Identities = 64/276 (23%), Positives = 127/276 (46%)
 Frame = +2

Query: 479  PLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLIIQSLTRSNKLDLGILHKL 658
            P T  A+I A   +G   +A  L  ++R +G       Y+ +++   ++  L       +
Sbjct: 292  PSTLVAVILALGNSGRTHEAEALFEEIRENGSEPRTRAYNALLKGYVKTGSLKDAEF--V 349

Query: 659  YNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQGLSPKTATLVAVISALGN 838
             +E+E   ++ D Q  + LI A+A AG  + A + L   E   + P +     ++++  +
Sbjct: 350  VSEMEKAGVKPDEQTYSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRD 409

Query: 839  SGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAESIVSEMERGGVSPDEHT 1018
             G   ++  V ++MK  GV+P    YN ++  + K   L  A +    M   G+ PD  T
Sbjct: 410  KGEWQKSFQVLKDMKSNGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVT 469

Query: 1019 YSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASYRDRGDWQKSFSVLREMR 1198
            ++ LI+ +  +GR   A  +  EM++    P    ++ ++ S  ++  W++    L +M+
Sbjct: 470  WNTLINCHCKSGRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQ 529

Query: 1199 CNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
              G+ P+   Y  ++D +GK       +   E +KS
Sbjct: 530  SQGLLPNSITYTTLVDVYGKSGRFSDAIECLEVLKS 565



 Score = 92.0 bits (227), Expect = 5e-16
 Identities = 70/307 (22%), Positives = 139/307 (45%), Gaps = 6/307 (1%)
 Frame = +2

Query: 398  YSILIHALGRSQKLYEAFLLSQRHDLTPL-----TYNALIGACTRNGDIEKALNLMGKMR 562
            YS+LI A   + +   A ++ +  + + +      Y+ ++ +    G+ +K+  ++  M+
Sbjct: 365  YSLLIDAYAHAGRWESARIVLKEMEASNVEPNSYVYSRILASYRDKGEWQKSFQVLKDMK 424

Query: 563  RDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGD 742
             +G   D   Y+++I +  + N LD  +    +  + ++ I  D    N LI    K+G 
Sbjct: 425  SNGVQPDRHFYNVMIDTFGKYNCLDHAMA--TFERMLSEGIRPDTVTWNTLINCHCKSGR 482

Query: 743  PDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNA 922
             + A       + +G SP   T   +I+++G   R  +      +M+  G+ P +  Y  
Sbjct: 483  HNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTT 542

Query: 923  LLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESN 1102
            L+  Y KSG   DA   +  ++  G  P    Y+ LI+AYA  G  E A    + M    
Sbjct: 543  LVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEG 602

Query: 1103 VQPNSYVFSRILASY-RDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHV 1279
            + P+    + ++ ++  DR D  ++F+VL+ M+ N + PD   Y  ++    +    + V
Sbjct: 603  LTPSLLALNSLINAFGEDRRD-AEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKV 661

Query: 1280 VSTFERM 1300
             + +E M
Sbjct: 662  PAVYEEM 668



 Score = 90.9 bits (224), Expect = 1e-15
 Identities = 61/245 (24%), Positives = 116/245 (47%)
 Frame = +2

Query: 488  YNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNE 667
            YN +I    +   ++ A+    +M  +G   D V ++ +I    +S + ++    +L+ E
Sbjct: 435  YNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLINCHCKSGRHNMA--EELFGE 492

Query: 668  LEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGR 847
            ++           N +I +  +    ++  +FL+  + QGL P + T   ++   G SGR
Sbjct: 493  MQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITYTTLVDVYGKSGR 552

Query: 848  TVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSL 1027
              +A    E +K  G KP +  YNAL+  Y + G    A +    M   G++P     + 
Sbjct: 553  FSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNS 612

Query: 1028 LIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASYRDRGDWQKSFSVLREMRCNG 1207
            LI+A+    R   A  VL+ M+E+N++P+   ++ ++ +      +QK  +V  EM  +G
Sbjct: 613  LINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVTSG 672

Query: 1208 VSPDR 1222
             +PDR
Sbjct: 673  CTPDR 677



 Score = 75.9 bits (185), Expect = 4e-11
 Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 2/208 (0%)
 Frame = +2

Query: 422  GRSQKLYEAFLLSQRHDLTPL--TYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNY 595
            GR     E F   Q+   +P   TYN +I +       E+    + KM+  G L + + Y
Sbjct: 481  GRHNMAEELFGEMQQRGYSPCITTYNIMINSMGEQQRWEQVSLFLSKMQSQGLLPNSITY 540

Query: 596  SLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMF 775
            + ++    +S +    I  +    L++   +    + N LI A+A+ G  + A+    + 
Sbjct: 541  TTLVDVYGKSGRFSDAI--ECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLM 598

Query: 776  EGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSL 955
              +GL+P    L ++I+A G   R  EA AV + MKE  ++P    Y  L+K  ++    
Sbjct: 599  TTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKF 658

Query: 956  RDAESIVSEMERGGVSPDEHTYSLLIDA 1039
            +   ++  EM   G +PD    ++L  A
Sbjct: 659  QKVPAVYEEMVTSGCTPDRKARAMLRSA 686


>ref|XP_007018012.1| Pentatricopeptide repeat superfamily protein isoform 3, partial
            [Theobroma cacao] gi|508723340|gb|EOY15237.1|
            Pentatricopeptide repeat superfamily protein isoform 3,
            partial [Theobroma cacao]
          Length = 623

 Score =  549 bits (1414), Expect = e-153
 Identities = 270/358 (75%), Positives = 311/358 (86%), Gaps = 5/358 (1%)
 Frame = +2

Query: 248  RLVESYRAVPAPLWHSVLKSL-----TSSPSTLHTAYALVEWLQTHNLCFSYDLLYSILI 412
            +L ESYRAVPAPLWHS+LKS+     +SS S+++ AYA+V WLQ HNLCFSY+LLYSILI
Sbjct: 105  QLAESYRAVPAPLWHSLLKSMCSSSSSSSSSSINLAYAVVSWLQRHNLCFSYELLYSILI 164

Query: 413  HALGRSQKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVN 592
            HALGRS+KLYEAFLLSQR  LTPLTYNALI AC RN D+EKALNLM +MR+DG+ SD+VN
Sbjct: 165  HALGRSEKLYEAFLLSQRQTLTPLTYNALINACARNNDLEKALNLMSRMRQDGYQSDFVN 224

Query: 593  YSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAM 772
            YSLIIQSLTRSNK+D  +L KLY E+E D+IE+DGQL ND+IV FAKA DP  A+ FLAM
Sbjct: 225  YSLIIQSLTRSNKIDSSLLQKLYGEIECDKIEVDGQLLNDIIVGFAKANDPSHALKFLAM 284

Query: 773  FEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGS 952
             +  GL+PKTATLVAVI +LG  GR  EAEAVFEEMK  G+KPRTRAYNALLKGYVK+GS
Sbjct: 285  AQAIGLNPKTATLVAVIYSLGCCGRIAEAEAVFEEMKGTGLKPRTRAYNALLKGYVKAGS 344

Query: 953  LRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSR 1132
            L+DAE +VSEMER GVSPDEHTYSLLIDAYANAGRWESARIVLKEME +NVQPNS+V+SR
Sbjct: 345  LKDAELVVSEMERSGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEANNVQPNSFVYSR 404

Query: 1133 ILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
            ILASYR++G+WQ+SF VLREM+ NG+ PDRHFYNVMIDTFGKYNCL+H + TF+RM S
Sbjct: 405  ILASYRNKGEWQRSFQVLREMKSNGIQPDRHFYNVMIDTFGKYNCLDHAMDTFDRMLS 462



 Score =  111 bits (277), Expect = 8e-22
 Identities = 70/303 (23%), Positives = 142/303 (46%), Gaps = 5/303 (1%)
 Frame = +2

Query: 407  LIHALGRSQKLYEAFLLSQRHDLTPL-----TYNALIGACTRNGDIEKALNLMGKMRRDG 571
            +I++LG   ++ EA  + +    T L      YNAL+    + G ++ A  ++ +M R G
Sbjct: 300  VIYSLGCCGRIAEAEAVFEEMKGTGLKPRTRAYNALLKGYVKAGSLKDAELVVSEMERSG 359

Query: 572  FLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDR 751
               D   YSL+I +   + + +   +  +  E+EA+ ++ +  + + ++ ++   G+  R
Sbjct: 360  VSPDEHTYSLLIDAYANAGRWESARI--VLKEMEANNVQPNSFVYSRILASYRNKGEWQR 417

Query: 752  AMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLK 931
            +   L   +  G+ P       +I   G       A   F+ M   G+KP T  +N L+ 
Sbjct: 418  SFQVLREMKSNGIQPDRHFYNVMIDTFGKYNCLDHAMDTFDRMLSEGIKPDTVTWNTLID 477

Query: 932  GYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQP 1111
             + K+G    AE +  EM+  G SP   TY+++I+++    RW++ + +L +M+   + P
Sbjct: 478  CHCKAGRHGRAEELFEEMKESGYSPCTTTYNIMINSFGGQERWDNVKSLLGKMQSQGLLP 537

Query: 1112 NSYVFSRILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTF 1291
            N   ++ ++  Y   G +  +   L  M+  G+ P    YN +I+ +      + V + +
Sbjct: 538  NIVTYTTLVDIYGKSGRFSDAMECLELMKSAGLKPSLTMYNALINAYA-----QRVPAVY 592

Query: 1292 ERM 1300
            E M
Sbjct: 593  EEM 595



 Score =  102 bits (253), Expect = 5e-19
 Identities = 68/269 (25%), Positives = 122/269 (45%)
 Frame = +2

Query: 500  IGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEAD 679
            +G C   G I +A  +  +M+  G       Y+ +++   ++  L    L  + +E+E  
Sbjct: 304  LGCC---GRIAEAEAVFEEMKGTGLKPRTRAYNALLKGYVKAGSLKDAEL--VVSEMERS 358

Query: 680  RIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEA 859
             +  D    + LI A+A AG  + A + L   E   + P +     ++++  N G    +
Sbjct: 359  GVSPDEHTYSLLIDAYANAGRWESARIVLKEMEANNVQPNSFVYSRILASYRNKGEWQRS 418

Query: 860  EAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDA 1039
              V  EMK  G++P    YN ++  + K   L  A      M   G+ PD  T++ LID 
Sbjct: 419  FQVLREMKSNGIQPDRHFYNVMIDTFGKYNCLDHAMDTFDRMLSEGIKPDTVTWNTLIDC 478

Query: 1040 YANAGRWESARIVLKEMEESNVQPNSYVFSRILASYRDRGDWQKSFSVLREMRCNGVSPD 1219
            +  AGR   A  + +EM+ES   P +  ++ ++ S+  +  W    S+L +M+  G+ P+
Sbjct: 479  HCKAGRHGRAEELFEEMKESGYSPCTTTYNIMINSFGGQERWDNVKSLLGKMQSQGLLPN 538

Query: 1220 RHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
               Y  ++D +GK       +   E MKS
Sbjct: 539  IVTYTTLVDIYGKSGRFSDAMECLELMKS 567


>ref|XP_007018011.1| Pentatricopeptide repeat (PPR-like) superfamily protein isoform 2,
            partial [Theobroma cacao] gi|508723339|gb|EOY15236.1|
            Pentatricopeptide repeat (PPR-like) superfamily protein
            isoform 2, partial [Theobroma cacao]
          Length = 698

 Score =  549 bits (1414), Expect = e-153
 Identities = 270/358 (75%), Positives = 311/358 (86%), Gaps = 5/358 (1%)
 Frame = +2

Query: 248  RLVESYRAVPAPLWHSVLKSL-----TSSPSTLHTAYALVEWLQTHNLCFSYDLLYSILI 412
            +L ESYRAVPAPLWHS+LKS+     +SS S+++ AYA+V WLQ HNLCFSY+LLYSILI
Sbjct: 105  QLAESYRAVPAPLWHSLLKSMCSSSSSSSSSSINLAYAVVSWLQRHNLCFSYELLYSILI 164

Query: 413  HALGRSQKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVN 592
            HALGRS+KLYEAFLLSQR  LTPLTYNALI AC RN D+EKALNLM +MR+DG+ SD+VN
Sbjct: 165  HALGRSEKLYEAFLLSQRQTLTPLTYNALINACARNNDLEKALNLMSRMRQDGYQSDFVN 224

Query: 593  YSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAM 772
            YSLIIQSLTRSNK+D  +L KLY E+E D+IE+DGQL ND+IV FAKA DP  A+ FLAM
Sbjct: 225  YSLIIQSLTRSNKIDSSLLQKLYGEIECDKIEVDGQLLNDIIVGFAKANDPSHALKFLAM 284

Query: 773  FEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGS 952
             +  GL+PKTATLVAVI +LG  GR  EAEAVFEEMK  G+KPRTRAYNALLKGYVK+GS
Sbjct: 285  AQAIGLNPKTATLVAVIYSLGCCGRIAEAEAVFEEMKGTGLKPRTRAYNALLKGYVKAGS 344

Query: 953  LRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSR 1132
            L+DAE +VSEMER GVSPDEHTYSLLIDAYANAGRWESARIVLKEME +NVQPNS+V+SR
Sbjct: 345  LKDAELVVSEMERSGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEANNVQPNSFVYSR 404

Query: 1133 ILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
            ILASYR++G+WQ+SF VLREM+ NG+ PDRHFYNVMIDTFGKYNCL+H + TF+RM S
Sbjct: 405  ILASYRNKGEWQRSFQVLREMKSNGIQPDRHFYNVMIDTFGKYNCLDHAMDTFDRMLS 462



 Score =  115 bits (289), Expect = 3e-23
 Identities = 80/292 (27%), Positives = 147/292 (50%), Gaps = 5/292 (1%)
 Frame = +2

Query: 398  YSILIHALGRSQKLYEAFLL---SQRHDLTP--LTYNALIGACTRNGDIEKALNLMGKMR 562
            Y+ L+    ++  L +A L+    +R  ++P   TY+ LI A    G  E A  ++ +M 
Sbjct: 332  YNALLKGYVKAGSLKDAELVVSEMERSGVSPDEHTYSLLIDAYANAGRWESARIVLKEME 391

Query: 563  RDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGD 742
             +    +   YS I+ S    NK +     ++  E++++ I+ D    N +I  F K   
Sbjct: 392  ANNVQPNSFVYSRILASYR--NKGEWQRSFQVLREMKSNGIQPDRHFYNVMIDTFGKYNC 449

Query: 743  PDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNA 922
             D AM        +G+ P T T   +I     +GR   AE +FEEMKE G  P T  YN 
Sbjct: 450  LDHAMDTFDRMLSEGIKPDTVTWNTLIDCHCKAGRHGRAEELFEEMKESGYSPCTTTYNI 509

Query: 923  LLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESN 1102
            ++  +       + +S++ +M+  G+ P+  TY+ L+D Y  +GR+  A   L+ M+ + 
Sbjct: 510  MINSFGGQERWDNVKSLLGKMQSQGLLPNIVTYTTLVDIYGKSGRFSDAMECLELMKSAG 569

Query: 1103 VQPNSYVFSRILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGK 1258
            ++P+  +++ ++ +Y  RG  +++ + LR MR +G+ P+    N +I+ FG+
Sbjct: 570  LKPSLTMYNALINAYAQRGLSEQAINALRIMRADGLKPNLLALNSLINAFGE 621



 Score =  114 bits (285), Expect = 9e-23
 Identities = 69/305 (22%), Positives = 143/305 (46%), Gaps = 5/305 (1%)
 Frame = +2

Query: 407  LIHALGRSQKLYEAFLLSQRHDLTPL-----TYNALIGACTRNGDIEKALNLMGKMRRDG 571
            +I++LG   ++ EA  + +    T L      YNAL+    + G ++ A  ++ +M R G
Sbjct: 300  VIYSLGCCGRIAEAEAVFEEMKGTGLKPRTRAYNALLKGYVKAGSLKDAELVVSEMERSG 359

Query: 572  FLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDR 751
               D   YSL+I +   + + +   +  +  E+EA+ ++ +  + + ++ ++   G+  R
Sbjct: 360  VSPDEHTYSLLIDAYANAGRWESARI--VLKEMEANNVQPNSFVYSRILASYRNKGEWQR 417

Query: 752  AMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLK 931
            +   L   +  G+ P       +I   G       A   F+ M   G+KP T  +N L+ 
Sbjct: 418  SFQVLREMKSNGIQPDRHFYNVMIDTFGKYNCLDHAMDTFDRMLSEGIKPDTVTWNTLID 477

Query: 932  GYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQP 1111
             + K+G    AE +  EM+  G SP   TY+++I+++    RW++ + +L +M+   + P
Sbjct: 478  CHCKAGRHGRAEELFEEMKESGYSPCTTTYNIMINSFGGQERWDNVKSLLGKMQSQGLLP 537

Query: 1112 NSYVFSRILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTF 1291
            N   ++ ++  Y   G +  +   L  M+  G+ P    YN +I+ + +    E  ++  
Sbjct: 538  NIVTYTTLVDIYGKSGRFSDAMECLELMKSAGLKPSLTMYNALINAYAQRGLSEQAINAL 597

Query: 1292 ERMKS 1306
              M++
Sbjct: 598  RIMRA 602



 Score =  102 bits (254), Expect = 4e-19
 Identities = 77/307 (25%), Positives = 147/307 (47%), Gaps = 6/307 (1%)
 Frame = +2

Query: 398  YSILIHALGRSQKLYEAFLL---SQRHDLTP--LTYNALIGACTRNGDIEKALNLMGKMR 562
            YS+LI A   + +   A ++    + +++ P    Y+ ++ +    G+ +++  ++ +M+
Sbjct: 367  YSLLIDAYANAGRWESARIVLKEMEANNVQPNSFVYSRILASYRNKGEWQRSFQVLREMK 426

Query: 563  RDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGD 742
             +G   D   Y+++I +  + N LD  +    ++ + ++ I+ D    N LI    KAG 
Sbjct: 427  SNGIQPDRHFYNVMIDTFGKYNCLDHAM--DTFDRMLSEGIKPDTVTWNTLIDCHCKAGR 484

Query: 743  PDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNA 922
              RA       +  G SP T T   +I++ G   R    +++  +M+  G+ P    Y  
Sbjct: 485  HGRAEELFEEMKESGYSPCTTTYNIMINSFGGQERWDNVKSLLGKMQSQGLLPNIVTYTT 544

Query: 923  LLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESN 1102
            L+  Y KSG   DA   +  M+  G+ P    Y+ LI+AYA  G  E A   L+ M    
Sbjct: 545  LVDIYGKSGRFSDAMECLELMKSAGLKPSLTMYNALINAYAQRGLSEQAINALRIMRADG 604

Query: 1103 VQPNSYVFSRILASY-RDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHV 1279
            ++PN    + ++ ++  DR D  ++F+VL+ M+ N V PD   Y  ++ +  + +    V
Sbjct: 605  LKPNLLALNSLINAFGEDRRD-VEAFAVLQYMKENDVKPDVVTYTTLMKSLIRVDKFHKV 663

Query: 1280 VSTFERM 1300
             + +E M
Sbjct: 664  PAVYEEM 670



 Score = 91.7 bits (226), Expect = 7e-16
 Identities = 63/245 (25%), Positives = 111/245 (45%)
 Frame = +2

Query: 488  YNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNE 667
            YN +I    +   ++ A++   +M  +G   D V ++ +I    ++ +   G   +L+ E
Sbjct: 437  YNVMIDTFGKYNCLDHAMDTFDRMLSEGIKPDTVTWNTLIDCHCKAGRH--GRAEELFEE 494

Query: 668  LEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGR 847
            ++           N +I +F      D     L   + QGL P   T   ++   G SGR
Sbjct: 495  MKESGYSPCTTTYNIMINSFGGQERWDNVKSLLGKMQSQGLLPNIVTYTTLVDIYGKSGR 554

Query: 848  TVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSL 1027
              +A    E MK  G+KP    YNAL+  Y + G    A + +  M   G+ P+    + 
Sbjct: 555  FSDAMECLELMKSAGLKPSLTMYNALINAYAQRGLSEQAINALRIMRADGLKPNLLALNS 614

Query: 1028 LIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASYRDRGDWQKSFSVLREMRCNG 1207
            LI+A+    R   A  VL+ M+E++V+P+   ++ ++ S      + K  +V  EM  +G
Sbjct: 615  LINAFGEDRRDVEAFAVLQYMKENDVKPDVVTYTTLMKSLIRVDKFHKVPAVYEEMILSG 674

Query: 1208 VSPDR 1222
             +PDR
Sbjct: 675  CTPDR 679



 Score = 82.4 bits (202), Expect = 4e-13
 Identities = 56/206 (27%), Positives = 98/206 (47%)
 Frame = +2

Query: 422  GRSQKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSL 601
            GR+++L+E    S     T  TYN +I +       +   +L+GKM+  G L + V Y+ 
Sbjct: 486  GRAEELFEEMKESGYSPCTT-TYNIMINSFGGQERWDNVKSLLGKMQSQGLLPNIVTYTT 544

Query: 602  IIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEG 781
            ++    +S +    +  +    +++  ++    + N LI A+A+ G  ++A+  L +   
Sbjct: 545  LVDIYGKSGRFSDAM--ECLELMKSAGLKPSLTMYNALINAYAQRGLSEQAINALRIMRA 602

Query: 782  QGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRD 961
             GL P    L ++I+A G   R VEA AV + MKE  VKP    Y  L+K  ++      
Sbjct: 603  DGLKPNLLALNSLINAFGEDRRDVEAFAVLQYMKENDVKPDVVTYTTLMKSLIRVDKFHK 662

Query: 962  AESIVSEMERGGVSPDEHTYSLLIDA 1039
              ++  EM   G +PD    ++L  A
Sbjct: 663  VPAVYEEMILSGCTPDRKARAMLRSA 688


>ref|XP_007018010.1| Pentatricopeptide repeat (PPR-like) superfamily protein isoform 1
            [Theobroma cacao] gi|508723338|gb|EOY15235.1|
            Pentatricopeptide repeat (PPR-like) superfamily protein
            isoform 1 [Theobroma cacao]
          Length = 703

 Score =  549 bits (1414), Expect = e-153
 Identities = 270/358 (75%), Positives = 311/358 (86%), Gaps = 5/358 (1%)
 Frame = +2

Query: 248  RLVESYRAVPAPLWHSVLKSL-----TSSPSTLHTAYALVEWLQTHNLCFSYDLLYSILI 412
            +L ESYRAVPAPLWHS+LKS+     +SS S+++ AYA+V WLQ HNLCFSY+LLYSILI
Sbjct: 110  QLAESYRAVPAPLWHSLLKSMCSSSSSSSSSSINLAYAVVSWLQRHNLCFSYELLYSILI 169

Query: 413  HALGRSQKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVN 592
            HALGRS+KLYEAFLLSQR  LTPLTYNALI AC RN D+EKALNLM +MR+DG+ SD+VN
Sbjct: 170  HALGRSEKLYEAFLLSQRQTLTPLTYNALINACARNNDLEKALNLMSRMRQDGYQSDFVN 229

Query: 593  YSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAM 772
            YSLIIQSLTRSNK+D  +L KLY E+E D+IE+DGQL ND+IV FAKA DP  A+ FLAM
Sbjct: 230  YSLIIQSLTRSNKIDSSLLQKLYGEIECDKIEVDGQLLNDIIVGFAKANDPSHALKFLAM 289

Query: 773  FEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGS 952
             +  GL+PKTATLVAVI +LG  GR  EAEAVFEEMK  G+KPRTRAYNALLKGYVK+GS
Sbjct: 290  AQAIGLNPKTATLVAVIYSLGCCGRIAEAEAVFEEMKGTGLKPRTRAYNALLKGYVKAGS 349

Query: 953  LRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSR 1132
            L+DAE +VSEMER GVSPDEHTYSLLIDAYANAGRWESARIVLKEME +NVQPNS+V+SR
Sbjct: 350  LKDAELVVSEMERSGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEANNVQPNSFVYSR 409

Query: 1133 ILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
            ILASYR++G+WQ+SF VLREM+ NG+ PDRHFYNVMIDTFGKYNCL+H + TF+RM S
Sbjct: 410  ILASYRNKGEWQRSFQVLREMKSNGIQPDRHFYNVMIDTFGKYNCLDHAMDTFDRMLS 467



 Score =  115 bits (289), Expect = 3e-23
 Identities = 80/292 (27%), Positives = 147/292 (50%), Gaps = 5/292 (1%)
 Frame = +2

Query: 398  YSILIHALGRSQKLYEAFLL---SQRHDLTP--LTYNALIGACTRNGDIEKALNLMGKMR 562
            Y+ L+    ++  L +A L+    +R  ++P   TY+ LI A    G  E A  ++ +M 
Sbjct: 337  YNALLKGYVKAGSLKDAELVVSEMERSGVSPDEHTYSLLIDAYANAGRWESARIVLKEME 396

Query: 563  RDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGD 742
             +    +   YS I+ S    NK +     ++  E++++ I+ D    N +I  F K   
Sbjct: 397  ANNVQPNSFVYSRILASYR--NKGEWQRSFQVLREMKSNGIQPDRHFYNVMIDTFGKYNC 454

Query: 743  PDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNA 922
             D AM        +G+ P T T   +I     +GR   AE +FEEMKE G  P T  YN 
Sbjct: 455  LDHAMDTFDRMLSEGIKPDTVTWNTLIDCHCKAGRHGRAEELFEEMKESGYSPCTTTYNI 514

Query: 923  LLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESN 1102
            ++  +       + +S++ +M+  G+ P+  TY+ L+D Y  +GR+  A   L+ M+ + 
Sbjct: 515  MINSFGGQERWDNVKSLLGKMQSQGLLPNIVTYTTLVDIYGKSGRFSDAMECLELMKSAG 574

Query: 1103 VQPNSYVFSRILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGK 1258
            ++P+  +++ ++ +Y  RG  +++ + LR MR +G+ P+    N +I+ FG+
Sbjct: 575  LKPSLTMYNALINAYAQRGLSEQAINALRIMRADGLKPNLLALNSLINAFGE 626



 Score =  114 bits (285), Expect = 9e-23
 Identities = 69/305 (22%), Positives = 143/305 (46%), Gaps = 5/305 (1%)
 Frame = +2

Query: 407  LIHALGRSQKLYEAFLLSQRHDLTPL-----TYNALIGACTRNGDIEKALNLMGKMRRDG 571
            +I++LG   ++ EA  + +    T L      YNAL+    + G ++ A  ++ +M R G
Sbjct: 305  VIYSLGCCGRIAEAEAVFEEMKGTGLKPRTRAYNALLKGYVKAGSLKDAELVVSEMERSG 364

Query: 572  FLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDR 751
               D   YSL+I +   + + +   +  +  E+EA+ ++ +  + + ++ ++   G+  R
Sbjct: 365  VSPDEHTYSLLIDAYANAGRWESARI--VLKEMEANNVQPNSFVYSRILASYRNKGEWQR 422

Query: 752  AMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLK 931
            +   L   +  G+ P       +I   G       A   F+ M   G+KP T  +N L+ 
Sbjct: 423  SFQVLREMKSNGIQPDRHFYNVMIDTFGKYNCLDHAMDTFDRMLSEGIKPDTVTWNTLID 482

Query: 932  GYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQP 1111
             + K+G    AE +  EM+  G SP   TY+++I+++    RW++ + +L +M+   + P
Sbjct: 483  CHCKAGRHGRAEELFEEMKESGYSPCTTTYNIMINSFGGQERWDNVKSLLGKMQSQGLLP 542

Query: 1112 NSYVFSRILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTF 1291
            N   ++ ++  Y   G +  +   L  M+  G+ P    YN +I+ + +    E  ++  
Sbjct: 543  NIVTYTTLVDIYGKSGRFSDAMECLELMKSAGLKPSLTMYNALINAYAQRGLSEQAINAL 602

Query: 1292 ERMKS 1306
              M++
Sbjct: 603  RIMRA 607



 Score =  102 bits (254), Expect = 4e-19
 Identities = 77/307 (25%), Positives = 147/307 (47%), Gaps = 6/307 (1%)
 Frame = +2

Query: 398  YSILIHALGRSQKLYEAFLL---SQRHDLTP--LTYNALIGACTRNGDIEKALNLMGKMR 562
            YS+LI A   + +   A ++    + +++ P    Y+ ++ +    G+ +++  ++ +M+
Sbjct: 372  YSLLIDAYANAGRWESARIVLKEMEANNVQPNSFVYSRILASYRNKGEWQRSFQVLREMK 431

Query: 563  RDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGD 742
             +G   D   Y+++I +  + N LD  +    ++ + ++ I+ D    N LI    KAG 
Sbjct: 432  SNGIQPDRHFYNVMIDTFGKYNCLDHAM--DTFDRMLSEGIKPDTVTWNTLIDCHCKAGR 489

Query: 743  PDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNA 922
              RA       +  G SP T T   +I++ G   R    +++  +M+  G+ P    Y  
Sbjct: 490  HGRAEELFEEMKESGYSPCTTTYNIMINSFGGQERWDNVKSLLGKMQSQGLLPNIVTYTT 549

Query: 923  LLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESN 1102
            L+  Y KSG   DA   +  M+  G+ P    Y+ LI+AYA  G  E A   L+ M    
Sbjct: 550  LVDIYGKSGRFSDAMECLELMKSAGLKPSLTMYNALINAYAQRGLSEQAINALRIMRADG 609

Query: 1103 VQPNSYVFSRILASY-RDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHV 1279
            ++PN    + ++ ++  DR D  ++F+VL+ M+ N V PD   Y  ++ +  + +    V
Sbjct: 610  LKPNLLALNSLINAFGEDRRD-VEAFAVLQYMKENDVKPDVVTYTTLMKSLIRVDKFHKV 668

Query: 1280 VSTFERM 1300
             + +E M
Sbjct: 669  PAVYEEM 675



 Score = 91.7 bits (226), Expect = 7e-16
 Identities = 63/245 (25%), Positives = 111/245 (45%)
 Frame = +2

Query: 488  YNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNE 667
            YN +I    +   ++ A++   +M  +G   D V ++ +I    ++ +   G   +L+ E
Sbjct: 442  YNVMIDTFGKYNCLDHAMDTFDRMLSEGIKPDTVTWNTLIDCHCKAGRH--GRAEELFEE 499

Query: 668  LEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGR 847
            ++           N +I +F      D     L   + QGL P   T   ++   G SGR
Sbjct: 500  MKESGYSPCTTTYNIMINSFGGQERWDNVKSLLGKMQSQGLLPNIVTYTTLVDIYGKSGR 559

Query: 848  TVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSL 1027
              +A    E MK  G+KP    YNAL+  Y + G    A + +  M   G+ P+    + 
Sbjct: 560  FSDAMECLELMKSAGLKPSLTMYNALINAYAQRGLSEQAINALRIMRADGLKPNLLALNS 619

Query: 1028 LIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASYRDRGDWQKSFSVLREMRCNG 1207
            LI+A+    R   A  VL+ M+E++V+P+   ++ ++ S      + K  +V  EM  +G
Sbjct: 620  LINAFGEDRRDVEAFAVLQYMKENDVKPDVVTYTTLMKSLIRVDKFHKVPAVYEEMILSG 679

Query: 1208 VSPDR 1222
             +PDR
Sbjct: 680  CTPDR 684



 Score = 82.4 bits (202), Expect = 4e-13
 Identities = 56/206 (27%), Positives = 98/206 (47%)
 Frame = +2

Query: 422  GRSQKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSL 601
            GR+++L+E    S     T  TYN +I +       +   +L+GKM+  G L + V Y+ 
Sbjct: 491  GRAEELFEEMKESGYSPCTT-TYNIMINSFGGQERWDNVKSLLGKMQSQGLLPNIVTYTT 549

Query: 602  IIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEG 781
            ++    +S +    +  +    +++  ++    + N LI A+A+ G  ++A+  L +   
Sbjct: 550  LVDIYGKSGRFSDAM--ECLELMKSAGLKPSLTMYNALINAYAQRGLSEQAINALRIMRA 607

Query: 782  QGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRD 961
             GL P    L ++I+A G   R VEA AV + MKE  VKP    Y  L+K  ++      
Sbjct: 608  DGLKPNLLALNSLINAFGEDRRDVEAFAVLQYMKENDVKPDVVTYTTLMKSLIRVDKFHK 667

Query: 962  AESIVSEMERGGVSPDEHTYSLLIDA 1039
              ++  EM   G +PD    ++L  A
Sbjct: 668  VPAVYEEMILSGCTPDRKARAMLRSA 693


>ref|XP_004500883.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X2 [Cicer arietinum]
          Length = 691

 Score =  547 bits (1409), Expect = e-153
 Identities = 265/353 (75%), Positives = 311/353 (88%)
 Frame = +2

Query: 248  RLVESYRAVPAPLWHSVLKSLTSSPSTLHTAYALVEWLQTHNLCFSYDLLYSILIHALGR 427
            +L ESYRAVP+PLWH++LKSL SS S++  AYA+V WL+ HNLCFSY+LLYSILIHALGR
Sbjct: 103  QLAESYRAVPSPLWHALLKSLCSSSSSITLAYAVVSWLEKHNLCFSYELLYSILIHALGR 162

Query: 428  SQKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLII 607
            ++KLYEAFLLSQR  LTPLTYNALIGAC RNGD+EKALNLM +MRRDGF  D+VNYS II
Sbjct: 163  NEKLYEAFLLSQRQVLTPLTYNALIGACARNGDLEKALNLMSRMRRDGFQPDFVNYSSII 222

Query: 608  QSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQG 787
            +SLTRSN++D  IL KLY E+E D+IE DG L ND+I+ F+KAGD  RAM FLA+ +G+G
Sbjct: 223  KSLTRSNRIDSPILQKLYAEIETDKIEADGHLLNDIILGFSKAGDATRAMHFLAVAQGKG 282

Query: 788  LSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAE 967
            L PKT T VAVI ALGNSGRTVEAEA+FEE+KE G++PRTRAYNALLKGYVK+GSL+DAE
Sbjct: 283  LCPKTGTFVAVILALGNSGRTVEAEALFEEIKESGLEPRTRAYNALLKGYVKTGSLKDAE 342

Query: 968  SIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASY 1147
             +VSEME+ GV PDEHTYSLL+DAYA+AGRWESARIVLKEME SN+QPNS+++SRILASY
Sbjct: 343  FVVSEMEKSGVLPDEHTYSLLVDAYAHAGRWESARIVLKEMEASNLQPNSFIYSRILASY 402

Query: 1148 RDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
            RD+G+WQKSF VL+EM+  GV PDRHFYNVMIDTFGKYNCL+H ++TFERM S
Sbjct: 403  RDKGEWQKSFQVLKEMKSCGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLS 455



 Score =  113 bits (282), Expect = 2e-22
 Identities = 72/303 (23%), Positives = 140/303 (46%), Gaps = 5/303 (1%)
 Frame = +2

Query: 407  LIHALGRSQKLYEAFLLSQR---HDLTPLT--YNALIGACTRNGDIEKALNLMGKMRRDG 571
            +I ALG S +  EA  L +      L P T  YNAL+    + G ++ A  ++ +M + G
Sbjct: 293  VILALGNSGRTVEAEALFEEIKESGLEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKSG 352

Query: 572  FLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDR 751
             L D   YSL++ +   + + +   +  +  E+EA  ++ +  + + ++ ++   G+  +
Sbjct: 353  VLPDEHTYSLLVDAYAHAGRWESARI--VLKEMEASNLQPNSFIYSRILASYRDKGEWQK 410

Query: 752  AMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLK 931
            +   L   +  G+ P       +I   G       A A FE M   G++P T  +N L+ 
Sbjct: 411  SFQVLKEMKSCGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLID 470

Query: 932  GYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQP 1111
             + KSG    AE +  EM++ G SP   TY+++I++     RW+    +L  M+   + P
Sbjct: 471  CHCKSGRHYRAEELFEEMQQSGYSPCVMTYNIMINSMGTQERWDRVSDLLSRMQSQGLLP 530

Query: 1112 NSYVFSRILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTF 1291
            N+  ++ ++  Y   G +  +   +  ++  G  P    YN +I+ + +    +  V+ F
Sbjct: 531  NAVTYTTLVDIYGKSGRFNDAIECIDVLKSLGFKPTSTMYNALINAYAQRGLSDLAVNAF 590

Query: 1292 ERM 1300
              M
Sbjct: 591  RMM 593



 Score = 83.6 bits (205), Expect = 2e-13
 Identities = 56/208 (26%), Positives = 99/208 (47%), Gaps = 2/208 (0%)
 Frame = +2

Query: 422  GRSQKLYEAFLLSQRHDLTP--LTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNY 595
            GR  +  E F   Q+   +P  +TYN +I +       ++  +L+ +M+  G L + V Y
Sbjct: 476  GRHYRAEELFEEMQQSGYSPCVMTYNIMINSMGTQERWDRVSDLLSRMQSQGLLPNAVTY 535

Query: 596  SLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMF 775
            + ++    +S + +  I  +  + L++   +    + N LI A+A+ G  D A+    M 
Sbjct: 536  TTLVDIYGKSGRFNDAI--ECIDVLKSLGFKPTSTMYNALINAYAQRGLSDLAVNAFRMM 593

Query: 776  EGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSL 955
              +GL+P    L ++I+A G   R  EA AV + MKE GV+P    Y  L+K  ++    
Sbjct: 594  AAEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVEPDVVTYTTLMKSLIRVDKY 653

Query: 956  RDAESIVSEMERGGVSPDEHTYSLLIDA 1039
                ++  EM   G +PD    ++L  A
Sbjct: 654  PKVPAVYEEMVMSGCAPDRKARAMLRSA 681



 Score = 82.4 bits (202), Expect = 4e-13
 Identities = 61/245 (24%), Positives = 108/245 (44%)
 Frame = +2

Query: 488  YNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNE 667
            YN +I    +   ++ A+    +M  +G   D V ++ +I    +S +       +L+ E
Sbjct: 430  YNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLIDCHCKSGRHYRA--EELFEE 487

Query: 668  LEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGR 847
            ++           N +I +       DR    L+  + QGL P   T   ++   G SGR
Sbjct: 488  MQQSGYSPCVMTYNIMINSMGTQERWDRVSDLLSRMQSQGLLPNAVTYTTLVDIYGKSGR 547

Query: 848  TVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSL 1027
              +A    + +K  G KP +  YNAL+  Y + G    A +    M   G++P     + 
Sbjct: 548  FNDAIECIDVLKSLGFKPTSTMYNALINAYAQRGLSDLAVNAFRMMAAEGLTPSLLALNS 607

Query: 1028 LIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASYRDRGDWQKSFSVLREMRCNG 1207
            LI+A+    R   A  VL+ M+E+ V+P+   ++ ++ S      + K  +V  EM  +G
Sbjct: 608  LINAFGEDRRDAEAFAVLQYMKENGVEPDVVTYTTLMKSLIRVDKYPKVPAVYEEMVMSG 667

Query: 1208 VSPDR 1222
             +PDR
Sbjct: 668  CAPDR 672


>ref|XP_004500882.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X1 [Cicer arietinum]
          Length = 720

 Score =  547 bits (1409), Expect = e-153
 Identities = 265/353 (75%), Positives = 311/353 (88%)
 Frame = +2

Query: 248  RLVESYRAVPAPLWHSVLKSLTSSPSTLHTAYALVEWLQTHNLCFSYDLLYSILIHALGR 427
            +L ESYRAVP+PLWH++LKSL SS S++  AYA+V WL+ HNLCFSY+LLYSILIHALGR
Sbjct: 103  QLAESYRAVPSPLWHALLKSLCSSSSSITLAYAVVSWLEKHNLCFSYELLYSILIHALGR 162

Query: 428  SQKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLII 607
            ++KLYEAFLLSQR  LTPLTYNALIGAC RNGD+EKALNLM +MRRDGF  D+VNYS II
Sbjct: 163  NEKLYEAFLLSQRQVLTPLTYNALIGACARNGDLEKALNLMSRMRRDGFQPDFVNYSSII 222

Query: 608  QSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQG 787
            +SLTRSN++D  IL KLY E+E D+IE DG L ND+I+ F+KAGD  RAM FLA+ +G+G
Sbjct: 223  KSLTRSNRIDSPILQKLYAEIETDKIEADGHLLNDIILGFSKAGDATRAMHFLAVAQGKG 282

Query: 788  LSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAE 967
            L PKT T VAVI ALGNSGRTVEAEA+FEE+KE G++PRTRAYNALLKGYVK+GSL+DAE
Sbjct: 283  LCPKTGTFVAVILALGNSGRTVEAEALFEEIKESGLEPRTRAYNALLKGYVKTGSLKDAE 342

Query: 968  SIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASY 1147
             +VSEME+ GV PDEHTYSLL+DAYA+AGRWESARIVLKEME SN+QPNS+++SRILASY
Sbjct: 343  FVVSEMEKSGVLPDEHTYSLLVDAYAHAGRWESARIVLKEMEASNLQPNSFIYSRILASY 402

Query: 1148 RDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
            RD+G+WQKSF VL+EM+  GV PDRHFYNVMIDTFGKYNCL+H ++TFERM S
Sbjct: 403  RDKGEWQKSFQVLKEMKSCGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLS 455



 Score =  113 bits (282), Expect = 2e-22
 Identities = 72/303 (23%), Positives = 140/303 (46%), Gaps = 5/303 (1%)
 Frame = +2

Query: 407  LIHALGRSQKLYEAFLLSQR---HDLTPLT--YNALIGACTRNGDIEKALNLMGKMRRDG 571
            +I ALG S +  EA  L +      L P T  YNAL+    + G ++ A  ++ +M + G
Sbjct: 293  VILALGNSGRTVEAEALFEEIKESGLEPRTRAYNALLKGYVKTGSLKDAEFVVSEMEKSG 352

Query: 572  FLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDR 751
             L D   YSL++ +   + + +   +  +  E+EA  ++ +  + + ++ ++   G+  +
Sbjct: 353  VLPDEHTYSLLVDAYAHAGRWESARI--VLKEMEASNLQPNSFIYSRILASYRDKGEWQK 410

Query: 752  AMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLK 931
            +   L   +  G+ P       +I   G       A A FE M   G++P T  +N L+ 
Sbjct: 411  SFQVLKEMKSCGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIRPDTVTWNTLID 470

Query: 932  GYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQP 1111
             + KSG    AE +  EM++ G SP   TY+++I++     RW+    +L  M+   + P
Sbjct: 471  CHCKSGRHYRAEELFEEMQQSGYSPCVMTYNIMINSMGTQERWDRVSDLLSRMQSQGLLP 530

Query: 1112 NSYVFSRILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTF 1291
            N+  ++ ++  Y   G +  +   +  ++  G  P    YN +I+ + +    +  V+ F
Sbjct: 531  NAVTYTTLVDIYGKSGRFNDAIECIDVLKSLGFKPTSTMYNALINAYAQRGLSDLAVNAF 590

Query: 1292 ERM 1300
              M
Sbjct: 591  RMM 593



 Score = 79.7 bits (195), Expect = 3e-12
 Identities = 69/300 (23%), Positives = 130/300 (43%), Gaps = 18/300 (6%)
 Frame = +2

Query: 398  YSILIHALGRSQKLYEAFLLSQRHDLTPLT-----YNALIGACTRNGDIEKALNLMGKMR 562
            YS+L+ A   + +   A ++ +  + + L      Y+ ++ +    G+ +K+  ++ +M+
Sbjct: 360  YSLLVDAYAHAGRWESARIVLKEMEASNLQPNSFIYSRILASYRDKGEWQKSFQVLKEMK 419

Query: 563  RDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGD 742
              G   D   Y+++I +  + N LD  +    +  + ++ I  D    N LI    K+G 
Sbjct: 420  SCGVQPDRHFYNVMIDTFGKYNCLDHAMA--TFERMLSEGIRPDTVTWNTLIDCHCKSGR 477

Query: 743  PDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNA 922
              RA       +  G SP   T   +I+++G   R      +   M+  G+ P    Y  
Sbjct: 478  HYRAEELFEEMQQSGYSPCVMTYNIMINSMGTQERWDRVSDLLSRMQSQGLLPNAVTYTT 537

Query: 923  LLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESN 1102
            L+  Y KSG   DA   +  ++  G  P    Y+ LI+AYA  G  + A    + M    
Sbjct: 538  LVDIYGKSGRFNDAIECIDVLKSLGFKPTSTMYNALINAYAQRGLSDLAVNAFRMMAAEG 597

Query: 1103 VQPNSYVFSRILASY-RDRGDWQKSFSVLREMRCN------------GVSPDRHFYNVMI 1243
            + P+    + ++ ++  DR D  ++F+VL+ M+ N            G SP R  Y + +
Sbjct: 598  LTPSLLALNSLINAFGEDRRD-AEAFAVLQYMKENVCFFTMFFSSFSGQSPKRLVYTLFV 656



 Score = 65.9 bits (159), Expect = 4e-08
 Identities = 56/233 (24%), Positives = 103/233 (44%), Gaps = 2/233 (0%)
 Frame = +2

Query: 422  GRSQKLYEAFLLSQRHDLTP--LTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNY 595
            GR  +  E F   Q+   +P  +TYN +I +       ++  +L+ +M+  G L + V Y
Sbjct: 476  GRHYRAEELFEEMQQSGYSPCVMTYNIMINSMGTQERWDRVSDLLSRMQSQGLLPNAVTY 535

Query: 596  SLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMF 775
            + ++    +S + +  I  +  + L++   +    + N LI A+A+ G  D A+    M 
Sbjct: 536  TTLVDIYGKSGRFNDAI--ECIDVLKSLGFKPTSTMYNALINAYAQRGLSDLAVNAFRMM 593

Query: 776  EGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSL 955
              +GL+P    L ++I+A G   R  EA AV + MKE         +      +      
Sbjct: 594  AAEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKEN-----VCFFTMFFSSFSGQSPK 648

Query: 956  RDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPN 1114
            R   ++   + +G V PD  TY+ L+ +     ++     V +EM  S   P+
Sbjct: 649  RLVYTLFVHVLQG-VEPDVVTYTTLMKSLIRVDKYPKVPAVYEEMVMSGCAPD 700


>ref|XP_006577944.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X3 [Glycine max]
          Length = 573

 Score =  543 bits (1399), Expect = e-152
 Identities = 268/356 (75%), Positives = 310/356 (87%), Gaps = 3/356 (0%)
 Frame = +2

Query: 248  RLVESYRAVPAPLWHSVLKSL---TSSPSTLHTAYALVEWLQTHNLCFSYDLLYSILIHA 418
            +L ESYRAVPAPLWH+ LKSL   +SS S++  AYA+V WLQ HNLCFSY+LLYSILI+A
Sbjct: 89   QLAESYRAVPAPLWHAFLKSLCASSSSSSSIALAYAVVSWLQKHNLCFSYELLYSILINA 148

Query: 419  LGRSQKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYS 598
            LGRS+KLYEAFLLSQR  LTPLTYNALIGAC RNGD+EKALNLM KMRRDG+  D+VNYS
Sbjct: 149  LGRSEKLYEAFLLSQRQVLTPLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYS 208

Query: 599  LIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFE 778
             IIQ LTRSNK+D  IL KLY E+E D+IE+DG L ND+IV F+KAGDP RAM FLAM +
Sbjct: 209  SIIQYLTRSNKIDSPILQKLYAEIETDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQ 268

Query: 779  GQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLR 958
              GL+PK +TLVAVI ALGNSGRT EAEA+FEE++E G++PRTRAYNALLKGYV++GSL+
Sbjct: 269  SNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLK 328

Query: 959  DAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRIL 1138
            DAE +VSEME+ GV PDE TYSLLID YA+AGRWESARIVLKEME SNVQPNSYVFSRIL
Sbjct: 329  DAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRIL 388

Query: 1139 ASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
            A+YRD+G+WQKSF VL++M+ +GV PDRHFYNVMIDTFGKYNCL+H ++TFERM S
Sbjct: 389  ANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLS 444



 Score =  114 bits (286), Expect = 7e-23
 Identities = 74/289 (25%), Positives = 134/289 (46%), Gaps = 5/289 (1%)
 Frame = +2

Query: 407  LIHALGRSQKLYEAFLLSQR---HDLTPLT--YNALIGACTRNGDIEKALNLMGKMRRDG 571
            +I ALG S + +EA  L +    + L P T  YNAL+    R G ++ A  ++ +M + G
Sbjct: 282  VILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAG 341

Query: 572  FLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDR 751
               D   YSL+I     + + +   +  +  E+EA  ++ +  + + ++  +   G+  +
Sbjct: 342  VKPDEQTYSLLIDVYAHAGRWESARI--VLKEMEASNVQPNSYVFSRILANYRDKGEWQK 399

Query: 752  AMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLK 931
            +   L   +  G+ P       +I   G       A A FE M   G+ P    +N L+ 
Sbjct: 400  SFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLID 459

Query: 932  GYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQP 1111
             + KSG    AE + SEM++ G SP   TY+++I++     RWE     L +M+   +QP
Sbjct: 460  CHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQP 519

Query: 1112 NSYVFSRILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGK 1258
            NS  ++ ++  Y   G +  +   L  ++  G  P    YN +I+ + +
Sbjct: 520  NSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQ 568



 Score = 99.0 bits (245), Expect = 4e-18
 Identities = 65/276 (23%), Positives = 127/276 (46%)
 Frame = +2

Query: 479  PLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLIIQSLTRSNKLDLGILHKL 658
            P T  A+I A   +G   +A  L  ++R +G       Y+ +++   R+  L       +
Sbjct: 276  PSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEF--V 333

Query: 659  YNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQGLSPKTATLVAVISALGN 838
             +E+E   ++ D Q  + LI  +A AG  + A + L   E   + P +     +++   +
Sbjct: 334  VSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRD 393

Query: 839  SGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAESIVSEMERGGVSPDEHT 1018
             G   ++  V ++MK  GV+P    YN ++  + K   L  A +    M   G+ PD  T
Sbjct: 394  KGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVT 453

Query: 1019 YSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASYRDRGDWQKSFSVLREMR 1198
            ++ LID +  +GR + A  +  EM++    P    ++ ++ S  ++  W++  + L +M+
Sbjct: 454  WNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQ 513

Query: 1199 CNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
              G+ P+   Y  ++D +GK       +   E +KS
Sbjct: 514  SQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKS 549


>ref|XP_006577943.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X2 [Glycine max]
          Length = 682

 Score =  543 bits (1399), Expect = e-152
 Identities = 268/356 (75%), Positives = 310/356 (87%), Gaps = 3/356 (0%)
 Frame = +2

Query: 248  RLVESYRAVPAPLWHSVLKSL---TSSPSTLHTAYALVEWLQTHNLCFSYDLLYSILIHA 418
            +L ESYRAVPAPLWH+ LKSL   +SS S++  AYA+V WLQ HNLCFSY+LLYSILI+A
Sbjct: 89   QLAESYRAVPAPLWHAFLKSLCASSSSSSSIALAYAVVSWLQKHNLCFSYELLYSILINA 148

Query: 419  LGRSQKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYS 598
            LGRS+KLYEAFLLSQR  LTPLTYNALIGAC RNGD+EKALNLM KMRRDG+  D+VNYS
Sbjct: 149  LGRSEKLYEAFLLSQRQVLTPLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYS 208

Query: 599  LIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFE 778
             IIQ LTRSNK+D  IL KLY E+E D+IE+DG L ND+IV F+KAGDP RAM FLAM +
Sbjct: 209  SIIQYLTRSNKIDSPILQKLYAEIETDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQ 268

Query: 779  GQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLR 958
              GL+PK +TLVAVI ALGNSGRT EAEA+FEE++E G++PRTRAYNALLKGYV++GSL+
Sbjct: 269  SNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLK 328

Query: 959  DAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRIL 1138
            DAE +VSEME+ GV PDE TYSLLID YA+AGRWESARIVLKEME SNVQPNSYVFSRIL
Sbjct: 329  DAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRIL 388

Query: 1139 ASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
            A+YRD+G+WQKSF VL++M+ +GV PDRHFYNVMIDTFGKYNCL+H ++TFERM S
Sbjct: 389  ANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLS 444



 Score =  119 bits (297), Expect = 4e-24
 Identities = 78/303 (25%), Positives = 139/303 (45%), Gaps = 5/303 (1%)
 Frame = +2

Query: 407  LIHALGRSQKLYEAFLLSQR---HDLTPLT--YNALIGACTRNGDIEKALNLMGKMRRDG 571
            +I ALG S + +EA  L +    + L P T  YNAL+    R G ++ A  ++ +M + G
Sbjct: 282  VILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAG 341

Query: 572  FLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDR 751
               D   YSL+I     + + +   +  +  E+EA  ++ +  + + ++  +   G+  +
Sbjct: 342  VKPDEQTYSLLIDVYAHAGRWESARI--VLKEMEASNVQPNSYVFSRILANYRDKGEWQK 399

Query: 752  AMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLK 931
            +   L   +  G+ P       +I   G       A A FE M   G+ P    +N L+ 
Sbjct: 400  SFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLID 459

Query: 932  GYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQP 1111
             + KSG    AE + SEM++ G SP   TY+++I++     RWE     L +M+   +QP
Sbjct: 460  CHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQP 519

Query: 1112 NSYVFSRILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTF 1291
            NS  ++ ++  Y   G +  +   L  ++  G  P    YN +I+ + +    E  V+ F
Sbjct: 520  NSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAF 579

Query: 1292 ERM 1300
              M
Sbjct: 580  RLM 582



 Score = 99.0 bits (245), Expect = 4e-18
 Identities = 65/276 (23%), Positives = 127/276 (46%)
 Frame = +2

Query: 479  PLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLIIQSLTRSNKLDLGILHKL 658
            P T  A+I A   +G   +A  L  ++R +G       Y+ +++   R+  L       +
Sbjct: 276  PSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEF--V 333

Query: 659  YNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQGLSPKTATLVAVISALGN 838
             +E+E   ++ D Q  + LI  +A AG  + A + L   E   + P +     +++   +
Sbjct: 334  VSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRD 393

Query: 839  SGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAESIVSEMERGGVSPDEHT 1018
             G   ++  V ++MK  GV+P    YN ++  + K   L  A +    M   G+ PD  T
Sbjct: 394  KGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVT 453

Query: 1019 YSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASYRDRGDWQKSFSVLREMR 1198
            ++ LID +  +GR + A  +  EM++    P    ++ ++ S  ++  W++  + L +M+
Sbjct: 454  WNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQ 513

Query: 1199 CNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
              G+ P+   Y  ++D +GK       +   E +KS
Sbjct: 514  SQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKS 549



 Score = 90.9 bits (224), Expect = 1e-15
 Identities = 71/290 (24%), Positives = 133/290 (45%), Gaps = 3/290 (1%)
 Frame = +2

Query: 383  SYDLLYSILIHALGRSQKLYEAFLLSQRHDLTPLTY--NALIGACTRNGDIEKALNLMGK 556
            +Y LL  +  HA GR +         +  ++ P +Y  + ++      G+ +K+  ++  
Sbjct: 348  TYSLLIDVYAHA-GRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKD 406

Query: 557  MRRDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKA 736
            M+  G   D   Y+++I +  + N LD  +    +  + ++ I  D    N LI    K+
Sbjct: 407  MKSSGVQPDRHFYNVMIDTFGKYNCLDHAMA--TFERMLSEGIPPDIVTWNTLIDCHCKS 464

Query: 737  GDPDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAY 916
            G  D A    +  + +G SP   T   +I+++G   R  +  A   +M+  G++P +  Y
Sbjct: 465  GRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITY 524

Query: 917  NALLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEE 1096
              L+  Y KSG   DA   +  ++  G  P    Y+ LI+AYA  G  E A    + M  
Sbjct: 525  TTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTT 584

Query: 1097 SNVQPNSYVFSRILASY-RDRGDWQKSFSVLREMRCNGVSPDRHFYNVMI 1243
              + P+    + ++ ++  DR D  ++F+VL+ M+ N + PD   Y  ++
Sbjct: 585  EGLTPSLLALNSLINAFGEDRRD-AEAFAVLQYMKENNIEPDVVTYTTLM 633



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 49/227 (21%), Positives = 92/227 (40%), Gaps = 35/227 (15%)
 Frame = +2

Query: 488  YNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNE 667
            YN +I    +   ++ A+    +M  +G   D V ++ +I    +S + D+    +L++E
Sbjct: 419  YNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMA--EELFSE 476

Query: 668  LEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGR 847
            ++           N +I +  +    ++   FL+  + QGL P + T   ++   G SGR
Sbjct: 477  MQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGR 536

Query: 848  TVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSG-------------------------- 949
              +A    E +K  G KP +  YNAL+  Y + G                          
Sbjct: 537  FSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNS 596

Query: 950  -------SLRDAES--IVSEMERGGVSPDEHTYSLLIDAYANAGRWE 1063
                     RDAE+  ++  M+   + PD  TY+ L+ A     +++
Sbjct: 597  LINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQ 643



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 44/176 (25%), Positives = 79/176 (44%), Gaps = 2/176 (1%)
 Frame = +2

Query: 422 GRSQKLYEAFLLSQRHDLTPL--TYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNY 595
           GR     E F   Q+   +P   TYN +I +       E+    + KM+  G   + + Y
Sbjct: 465 GRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITY 524

Query: 596 SLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMF 775
           + ++    +S +    I  +    L++   +    + N LI A+A+ G  + A+    + 
Sbjct: 525 TTLVDVYGKSGRFSDAI--ECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLM 582

Query: 776 EGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVK 943
             +GL+P    L ++I+A G   R  EA AV + MKE  ++P    Y  L+K  ++
Sbjct: 583 TTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIR 638


>ref|XP_006435342.1| hypothetical protein CICLE_v10000451mg [Citrus clementina]
            gi|567885569|ref|XP_006435343.1| hypothetical protein
            CICLE_v10000451mg [Citrus clementina]
            gi|557537464|gb|ESR48582.1| hypothetical protein
            CICLE_v10000451mg [Citrus clementina]
            gi|557537465|gb|ESR48583.1| hypothetical protein
            CICLE_v10000451mg [Citrus clementina]
          Length = 704

 Score =  543 bits (1399), Expect = e-152
 Identities = 261/353 (73%), Positives = 306/353 (86%)
 Frame = +2

Query: 248  RLVESYRAVPAPLWHSVLKSLTSSPSTLHTAYALVEWLQTHNLCFSYDLLYSILIHALGR 427
            +L ESYRAVPAPLWHS+LK+L SS S++  AYA+V WLQ HNLC+SY+LLYSILIHALGR
Sbjct: 116  KLAESYRAVPAPLWHSLLKNLCSSNSSIDLAYAVVSWLQKHNLCYSYELLYSILIHALGR 175

Query: 428  SQKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLII 607
            S+KLYEAFLLSQR  LTPLTYNALI AC RN D+EKALNLM KMR+DG+  D++NYSL+I
Sbjct: 176  SEKLYEAFLLSQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDFINYSLVI 235

Query: 608  QSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQG 787
            QSLTR+NK+D  +LHKLY E+E D+IELDGQL ND+IV FAKAGD  +AM FL M +G G
Sbjct: 236  QSLTRTNKIDSSLLHKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVG 295

Query: 788  LSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAE 967
            LSPKTAT  AVI+AL NSGRT+EAEAVFEE+KE G+KPRT+A+NALLKGYVK G L+DAE
Sbjct: 296  LSPKTATYAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAFNALLKGYVKMGYLKDAE 355

Query: 968  SIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASY 1147
             +VSEMER GV PDEHTYSLLIDAYANAGRWESARIVLKEME S+ +PNS+++SRILA Y
Sbjct: 356  FVVSEMERSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGY 415

Query: 1148 RDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
            RDRG+WQ++F VL+EM+ +GV PD HFYNVMIDTFGKYNCL H ++ F+RM S
Sbjct: 416  RDRGEWQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLS 468



 Score =  112 bits (280), Expect = 4e-22
 Identities = 74/308 (24%), Positives = 136/308 (44%), Gaps = 5/308 (1%)
 Frame = +2

Query: 398  YSILIHALGRSQKLYEA---FLLSQRHDLTPLT--YNALIGACTRNGDIEKALNLMGKMR 562
            Y+ +I AL  S +  EA   F   +   L P T  +NAL+    + G ++ A  ++ +M 
Sbjct: 303  YAAVITALSNSGRTIEAEAVFEELKESGLKPRTKAFNALLKGYVKMGYLKDAEFVVSEME 362

Query: 563  RDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGD 742
            R G L D   YSL+I +   + + +   +  +  E+E    + +  + + ++  +   G+
Sbjct: 363  RSGVLPDEHTYSLLIDAYANAGRWESARI--VLKEMEVSHAKPNSFIYSRILAGYRDRGE 420

Query: 743  PDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNA 922
              R    L   +  G+ P T     +I   G       A A F+ M   G++P T  +N 
Sbjct: 421  WQRTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNT 480

Query: 923  LLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESN 1102
            L+  + K G    AE +  EM+  G  P   TY+++I+      RWE  + +L  M    
Sbjct: 481  LIDCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQG 540

Query: 1103 VQPNSYVFSRILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVV 1282
            + PN   ++ ++  Y   G +  +   L  M+  G+ P    YN +I+ + +    +  V
Sbjct: 541  LLPNVVTYTTLVDIYGQSGRFDDAIECLEVMKAAGLKPSSTMYNALINAYARRGLSDQAV 600

Query: 1283 STFERMKS 1306
            + F  M++
Sbjct: 601  NAFRVMRT 608



 Score = 98.6 bits (244), Expect = 5e-18
 Identities = 86/391 (21%), Positives = 158/391 (40%), Gaps = 42/391 (10%)
 Frame = +2

Query: 260  SYRAVPAPLWHSVLKSLTSSPSTLHTAYALVEWLQTHNLCFSYDLLYSILIHALGRSQKL 439
            S R    PL ++ L S  +    L  A  L+  ++       + + YS++I +L R+ K+
Sbjct: 186  SQRQRLTPLTYNALISACARNDDLEKALNLMSKMRQDGYHCDF-INYSLVIQSLTRTNKI 244

Query: 440  YEAFLLS-------QRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYS 598
              + L          + +L     N +I    + GD  KA+  +G  +  G       Y+
Sbjct: 245  DSSLLHKLYKEIECDKIELDGQLLNDVIVGFAKAGDASKAMRFLGMAQGVGLSPKTATYA 304

Query: 599  LIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFE 778
             +I +L+ S +        ++ EL+   ++   +  N L+  + K G    A   ++  E
Sbjct: 305  AVITALSNSGRTIEA--EAVFEELKESGLKPRTKAFNALLKGYVKMGYLKDAEFVVSEME 362

Query: 779  GQGLSPKTATLVAVISALGNSGRTVEAEAVFEEM-------------------------- 880
              G+ P   T   +I A  N+GR   A  V +EM                          
Sbjct: 363  RSGVLPDEHTYSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQ 422

Query: 881  ---------KEGGVKPRTRAYNALLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLI 1033
                     K  GV+P T  YN ++  + K   L  A +    M   G+ PD  T++ LI
Sbjct: 423  RTFQVLKEMKSSGVEPDTHFYNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLI 482

Query: 1034 DAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASYRDRGDWQKSFSVLREMRCNGVS 1213
            D +   GR++ A  + +EM+E    P +  ++ ++    ++  W+    +L  MR  G+ 
Sbjct: 483  DCHFKCGRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLL 542

Query: 1214 PDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
            P+   Y  ++D +G+    +  +   E MK+
Sbjct: 543  PNVVTYTTLVDIYGQSGRFDDAIECLEVMKA 573



 Score = 95.5 bits (236), Expect = 5e-17
 Identities = 69/306 (22%), Positives = 139/306 (45%), Gaps = 5/306 (1%)
 Frame = +2

Query: 398  YSILIHALGRSQKLYEAFLLSQRHDLT-----PLTYNALIGACTRNGDIEKALNLMGKMR 562
            YS+LI A   + +   A ++ +  +++        Y+ ++      G+ ++   ++ +M+
Sbjct: 373  YSLLIDAYANAGRWESARIVLKEMEVSHAKPNSFIYSRILAGYRDRGEWQRTFQVLKEMK 432

Query: 563  RDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGD 742
              G   D   Y+++I +  + N L   +    ++ + ++ IE D    N LI    K G 
Sbjct: 433  SSGVEPDTHFYNVMIDTFGKYNCLHHAMA--AFDRMLSEGIEPDTITWNTLIDCHFKCGR 490

Query: 743  PDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNA 922
             DRA       + +G  P T T   +I+ LG   R  + + +   M+  G+ P    Y  
Sbjct: 491  YDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTYTT 550

Query: 923  LLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESN 1102
            L+  Y +SG   DA   +  M+  G+ P    Y+ LI+AYA  G  + A    + M    
Sbjct: 551  LVDIYGQSGRFDDAIECLEVMKAAGLKPSSTMYNALINAYARRGLSDQAVNAFRVMRTDG 610

Query: 1103 VQPNSYVFSRILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVV 1282
            ++P++   + ++ ++ +     ++F+VL+ M+ NG+ PD   Y  ++    + +    V 
Sbjct: 611  LKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKFHKVP 670

Query: 1283 STFERM 1300
            + +E M
Sbjct: 671  AVYEEM 676



 Score = 87.0 bits (214), Expect = 2e-14
 Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 2/208 (0%)
 Frame = +2

Query: 422  GRSQKLYEAFLLSQRHDLTPLT--YNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNY 595
            GR  +  E F   Q     P T  YN +I         E    L+G MR  G L + V Y
Sbjct: 489  GRYDRAEELFEEMQERGYFPCTTTYNIMINLLGEQERWEDVKRLLGNMRAQGLLPNVVTY 548

Query: 596  SLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMF 775
            + ++    +S + D  I  +    ++A  ++    + N LI A+A+ G  D+A+    + 
Sbjct: 549  TTLVDIYGQSGRFDDAI--ECLEVMKAAGLKPSSTMYNALINAYARRGLSDQAVNAFRVM 606

Query: 776  EGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSL 955
               GL P    L ++I+A G   R  EA AV + MKE G+KP    Y  L+K  ++    
Sbjct: 607  RTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENGLKPDVVTYTTLMKALIRVDKF 666

Query: 956  RDAESIVSEMERGGVSPDEHTYSLLIDA 1039
                ++  EM   G +PD    ++L  A
Sbjct: 667  HKVPAVYEEMILSGCTPDRKARAMLRSA 694



 Score = 82.0 bits (201), Expect = 5e-13
 Identities = 66/280 (23%), Positives = 114/280 (40%), Gaps = 5/280 (1%)
 Frame = +2

Query: 398  YSILIHALGRSQKLYEAF-----LLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMR 562
            Y+++I   G+   L+ A      +LS+  +   +T+N LI    + G  ++A  L  +M+
Sbjct: 443  YNVMIDTFGKYNCLHHAMAAFDRMLSEGIEPDTITWNTLIDCHFKCGRYDRAEELFEEMQ 502

Query: 563  RDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGD 742
              G+      Y+++I  L    + +                                  D
Sbjct: 503  ERGYFPCTTTYNIMINLLGEQERWE----------------------------------D 528

Query: 743  PDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNA 922
              R    L     QGL P   T   ++   G SGR  +A    E MK  G+KP +  YNA
Sbjct: 529  VKR---LLGNMRAQGLLPNVVTYTTLVDIYGQSGRFDDAIECLEVMKAAGLKPSSTMYNA 585

Query: 923  LLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESN 1102
            L+  Y + G    A +    M   G+ P     + LI+A+    R   A  VL+ M+E+ 
Sbjct: 586  LINAYARRGLSDQAVNAFRVMRTDGLKPSNLALNSLINAFGEDQRDAEAFAVLQYMKENG 645

Query: 1103 VQPNSYVFSRILASYRDRGDWQKSFSVLREMRCNGVSPDR 1222
            ++P+   ++ ++ +      + K  +V  EM  +G +PDR
Sbjct: 646  LKPDVVTYTTLMKALIRVDKFHKVPAVYEEMILSGCTPDR 685


>ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like isoform X1 [Glycine max]
          Length = 680

 Score =  543 bits (1399), Expect = e-152
 Identities = 268/356 (75%), Positives = 310/356 (87%), Gaps = 3/356 (0%)
 Frame = +2

Query: 248  RLVESYRAVPAPLWHSVLKSL---TSSPSTLHTAYALVEWLQTHNLCFSYDLLYSILIHA 418
            +L ESYRAVPAPLWH+ LKSL   +SS S++  AYA+V WLQ HNLCFSY+LLYSILI+A
Sbjct: 89   QLAESYRAVPAPLWHAFLKSLCASSSSSSSIALAYAVVSWLQKHNLCFSYELLYSILINA 148

Query: 419  LGRSQKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYS 598
            LGRS+KLYEAFLLSQR  LTPLTYNALIGAC RNGD+EKALNLM KMRRDG+  D+VNYS
Sbjct: 149  LGRSEKLYEAFLLSQRQVLTPLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYS 208

Query: 599  LIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFE 778
             IIQ LTRSNK+D  IL KLY E+E D+IE+DG L ND+IV F+KAGDP RAM FLAM +
Sbjct: 209  SIIQYLTRSNKIDSPILQKLYAEIETDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQ 268

Query: 779  GQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLR 958
              GL+PK +TLVAVI ALGNSGRT EAEA+FEE++E G++PRTRAYNALLKGYV++GSL+
Sbjct: 269  SNGLNPKPSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLK 328

Query: 959  DAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRIL 1138
            DAE +VSEME+ GV PDE TYSLLID YA+AGRWESARIVLKEME SNVQPNSYVFSRIL
Sbjct: 329  DAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRIL 388

Query: 1139 ASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
            A+YRD+G+WQKSF VL++M+ +GV PDRHFYNVMIDTFGKYNCL+H ++TFERM S
Sbjct: 389  ANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLS 444



 Score =  119 bits (297), Expect = 4e-24
 Identities = 78/303 (25%), Positives = 139/303 (45%), Gaps = 5/303 (1%)
 Frame = +2

Query: 407  LIHALGRSQKLYEAFLLSQR---HDLTPLT--YNALIGACTRNGDIEKALNLMGKMRRDG 571
            +I ALG S + +EA  L +    + L P T  YNAL+    R G ++ A  ++ +M + G
Sbjct: 282  VILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAG 341

Query: 572  FLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDR 751
               D   YSL+I     + + +   +  +  E+EA  ++ +  + + ++  +   G+  +
Sbjct: 342  VKPDEQTYSLLIDVYAHAGRWESARI--VLKEMEASNVQPNSYVFSRILANYRDKGEWQK 399

Query: 752  AMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLK 931
            +   L   +  G+ P       +I   G       A A FE M   G+ P    +N L+ 
Sbjct: 400  SFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLID 459

Query: 932  GYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQP 1111
             + KSG    AE + SEM++ G SP   TY+++I++     RWE     L +M+   +QP
Sbjct: 460  CHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQP 519

Query: 1112 NSYVFSRILASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTF 1291
            NS  ++ ++  Y   G +  +   L  ++  G  P    YN +I+ + +    E  V+ F
Sbjct: 520  NSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAF 579

Query: 1292 ERM 1300
              M
Sbjct: 580  RLM 582



 Score = 99.0 bits (245), Expect = 4e-18
 Identities = 65/276 (23%), Positives = 127/276 (46%)
 Frame = +2

Query: 479  PLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLIIQSLTRSNKLDLGILHKL 658
            P T  A+I A   +G   +A  L  ++R +G       Y+ +++   R+  L       +
Sbjct: 276  PSTLVAVILALGNSGRTHEAEALFEEIRENGLEPRTRAYNALLKGYVRTGSLKDAEF--V 333

Query: 659  YNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQGLSPKTATLVAVISALGN 838
             +E+E   ++ D Q  + LI  +A AG  + A + L   E   + P +     +++   +
Sbjct: 334  VSEMEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRD 393

Query: 839  SGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAESIVSEMERGGVSPDEHT 1018
             G   ++  V ++MK  GV+P    YN ++  + K   L  A +    M   G+ PD  T
Sbjct: 394  KGEWQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVT 453

Query: 1019 YSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASYRDRGDWQKSFSVLREMR 1198
            ++ LID +  +GR + A  +  EM++    P    ++ ++ S  ++  W++  + L +M+
Sbjct: 454  WNTLIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQ 513

Query: 1199 CNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
              G+ P+   Y  ++D +GK       +   E +KS
Sbjct: 514  SQGLQPNSITYTTLVDVYGKSGRFSDAIECLEVLKS 549



 Score = 94.7 bits (234), Expect = 8e-17
 Identities = 74/309 (23%), Positives = 140/309 (45%), Gaps = 3/309 (0%)
 Frame = +2

Query: 383  SYDLLYSILIHALGRSQKLYEAFLLSQRHDLTPLTY--NALIGACTRNGDIEKALNLMGK 556
            +Y LL  +  HA GR +         +  ++ P +Y  + ++      G+ +K+  ++  
Sbjct: 348  TYSLLIDVYAHA-GRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGEWQKSFQVLKD 406

Query: 557  MRRDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKA 736
            M+  G   D   Y+++I +  + N LD  +    +  + ++ I  D    N LI    K+
Sbjct: 407  MKSSGVQPDRHFYNVMIDTFGKYNCLDHAMA--TFERMLSEGIPPDIVTWNTLIDCHCKS 464

Query: 737  GDPDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAY 916
            G  D A    +  + +G SP   T   +I+++G   R  +  A   +M+  G++P +  Y
Sbjct: 465  GRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITY 524

Query: 917  NALLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEE 1096
              L+  Y KSG   DA   +  ++  G  P    Y+ LI+AYA  G  E A    + M  
Sbjct: 525  TTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTT 584

Query: 1097 SNVQPNSYVFSRILASY-RDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLE 1273
              + P+    + ++ ++  DR D  ++F+VL+ M+ N + PD   Y  ++    +    +
Sbjct: 585  EGLTPSLLALNSLINAFGEDRRD-AEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQ 643

Query: 1274 HVVSTFERM 1300
             V + +E M
Sbjct: 644  KVPAVYEEM 652



 Score = 94.0 bits (232), Expect = 1e-16
 Identities = 62/245 (25%), Positives = 116/245 (47%)
 Frame = +2

Query: 488  YNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNE 667
            YN +I    +   ++ A+    +M  +G   D V ++ +I    +S + D+    +L++E
Sbjct: 419  YNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMA--EELFSE 476

Query: 668  LEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGR 847
            ++           N +I +  +    ++   FL+  + QGL P + T   ++   G SGR
Sbjct: 477  MQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGR 536

Query: 848  TVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSL 1027
              +A    E +K  G KP +  YNAL+  Y + G    A +    M   G++P     + 
Sbjct: 537  FSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNS 596

Query: 1028 LIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASYRDRGDWQKSFSVLREMRCNG 1207
            LI+A+    R   A  VL+ M+E+N++P+   ++ ++ +      +QK  +V  EM  +G
Sbjct: 597  LINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVASG 656

Query: 1208 VSPDR 1222
             +PDR
Sbjct: 657  CTPDR 661



 Score = 75.1 bits (183), Expect = 6e-11
 Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 2/208 (0%)
 Frame = +2

Query: 422  GRSQKLYEAFLLSQRHDLTPL--TYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNY 595
            GR     E F   Q+   +P   TYN +I +       E+    + KM+  G   + + Y
Sbjct: 465  GRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITY 524

Query: 596  SLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMF 775
            + ++    +S +    I  +    L++   +    + N LI A+A+ G  + A+    + 
Sbjct: 525  TTLVDVYGKSGRFSDAI--ECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLM 582

Query: 776  EGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSL 955
              +GL+P    L ++I+A G   R  EA AV + MKE  ++P    Y  L+K  ++    
Sbjct: 583  TTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKF 642

Query: 956  RDAESIVSEMERGGVSPDEHTYSLLIDA 1039
            +   ++  EM   G +PD    ++L  A
Sbjct: 643  QKVPAVYEEMVASGCTPDRKARAMLRSA 670


>ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223551364|gb|EEF52850.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 695

 Score =  543 bits (1399), Expect = e-152
 Identities = 261/353 (73%), Positives = 312/353 (88%)
 Frame = +2

Query: 248  RLVESYRAVPAPLWHSVLKSLTSSPSTLHTAYALVEWLQTHNLCFSYDLLYSILIHALGR 427
            +L ESYRAVP PLWHS+LKSL+SS S++  AYA+V WLQ HNLCFSY+LLYSILIHALGR
Sbjct: 107  QLAESYRAVPGPLWHSLLKSLSSSSSSIGLAYAVVSWLQKHNLCFSYELLYSILIHALGR 166

Query: 428  SQKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLII 607
            S+KLYEAFLLSQ+  L+PLTYNALI AC RN D+EKA+NL+ +MR+DG+ SD+VNYSLII
Sbjct: 167  SEKLYEAFLLSQQQALSPLTYNALINACARNNDLEKAINLISRMRQDGYPSDFVNYSLII 226

Query: 608  QSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQG 787
            QSL RSN++D  IL KLY+E++ D++ELD QLSND+IV FAKAGDP++AM FL M +  G
Sbjct: 227  QSLVRSNRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGFAKAGDPNKAMEFLGMVQASG 286

Query: 788  LSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAE 967
            LSP+TATL+AVISALG+SGR +EAEA+FEEMK+ G+KP+TRAYN LLKGYVK+G L+DAE
Sbjct: 287  LSPRTATLIAVISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAE 346

Query: 968  SIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASY 1147
             IVSEMER GVSPDE TYSLLIDAY+NAGRWESARIVLKEME +N+ PNSYVFSRILASY
Sbjct: 347  FIVSEMERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASY 406

Query: 1148 RDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
            RDRG+WQKSF VL+EM+ +GV PDRHFYNVMIDTFGK++CL+H + TF++M S
Sbjct: 407  RDRGEWQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLS 459



 Score =  109 bits (272), Expect = 3e-21
 Identities = 80/351 (22%), Positives = 160/351 (45%), Gaps = 8/351 (2%)
 Frame = +2

Query: 278  APLWHSVLKSLTSSPSTLHTAYALVEWLQTHNLCFSYDLLYSILIHALGRS--------Q 433
            +PL ++ L +  +  + L  A  L+  ++       + + YS++I +L RS        Q
Sbjct: 183  SPLTYNALINACARNNDLEKAINLISRMRQDGYPSDF-VNYSLIIQSLVRSNRIDSPILQ 241

Query: 434  KLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLIIQS 613
            KLY   +   + +L     N +I    + GD  KA+  +G ++  G          +I +
Sbjct: 242  KLYSE-IQCDKLELDVQLSNDIIVGFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISA 300

Query: 614  LTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQGLS 793
            L  S ++       ++ E++ + ++   +  N L+  + KAG    A   ++  E  G+S
Sbjct: 301  LGDSGRIIEA--EAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVS 358

Query: 794  PKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAESI 973
            P   T   +I A  N+GR   A  V +EM+   + P +  ++ +L  Y   G  + +  +
Sbjct: 359  PDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQV 418

Query: 974  VSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASYRD 1153
            + EM+  GV PD H Y+++ID +      + A     +M    +QP++  ++ ++  +  
Sbjct: 419  LKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCK 478

Query: 1154 RGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
                +++  +  EM   G SP    +N+MI++FG+    + V +    M+S
Sbjct: 479  AELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRS 529



 Score =  101 bits (251), Expect = 8e-19
 Identities = 80/337 (23%), Positives = 146/337 (43%), Gaps = 38/337 (11%)
 Frame = +2

Query: 407  LIHALGRSQKLYEAFLLSQR---HDLTPLT--YNALIGACTRNGDIEKALNLMGKMRRDG 571
            +I ALG S ++ EA  + +    + L P T  YN L+    + G ++ A  ++ +M R G
Sbjct: 297  VISALGDSGRIIEAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSG 356

Query: 572  FLSDYVNYSLIIQSLTRSNKL------------------------------DLGILHKLY 661
               D   YSL+I + + + +                               D G   K +
Sbjct: 357  VSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSF 416

Query: 662  N---ELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQGLSPKTATLVAVISAL 832
                E++   +  D    N +I  F K    D AM        +G+ P T T   +I   
Sbjct: 417  QVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCH 476

Query: 833  GNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAESIVSEMERGGVSPDE 1012
              +     AE +FEEM E G  P    +N ++  + +     D ++++  M   G+ P+ 
Sbjct: 477  CKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNV 536

Query: 1013 HTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASYRDRGDWQKSFSVLRE 1192
             TY+ LID Y  +GR+  A   L++M+ + ++P+S +++ ++ +Y  +G  +++ +  R 
Sbjct: 537  VTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRL 596

Query: 1193 MRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMK 1303
            MR + + P     N +I+ FG+        S  + MK
Sbjct: 597  MRADSLKPSLLALNSLINAFGEDRRDAEAFSVLKYMK 633



 Score = 97.8 bits (242), Expect = 9e-18
 Identities = 74/307 (24%), Positives = 146/307 (47%), Gaps = 6/307 (1%)
 Frame = +2

Query: 398  YSILIHALGRSQKLYEAFLL---SQRHDLTPLTY--NALIGACTRNGDIEKALNLMGKMR 562
            YS+LI A   + +   A ++    + +++ P +Y  + ++ +    G+ +K+  ++ +M+
Sbjct: 364  YSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMK 423

Query: 563  RDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGD 742
              G   D   Y+++I +  + + LD  +    ++++ ++ I+ D    N LI    KA  
Sbjct: 424  NSGVRPDRHFYNVMIDTFGKFSCLDHAM--DTFDKMLSEGIQPDTVTWNTLIDCHCKAEL 481

Query: 743  PDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNA 922
             +RA         +G SP   T   +I++ G   R  + + +   M+  G+ P    Y  
Sbjct: 482  HERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTT 541

Query: 923  LLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESN 1102
            L+  Y KSG   DA   + +M+  G+ P    Y+ LI+AYA  G  E A    + M   +
Sbjct: 542  LIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADS 601

Query: 1103 VQPNSYVFSRILASY-RDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHV 1279
            ++P+    + ++ ++  DR D  ++FSVL+ M+ N + PD   Y  ++    + +    V
Sbjct: 602  LKPSLLALNSLINAFGEDRRD-AEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFNKV 660

Query: 1280 VSTFERM 1300
             S +E M
Sbjct: 661  PSVYEEM 667



 Score = 85.5 bits (210), Expect = 5e-14
 Identities = 64/249 (25%), Positives = 108/249 (43%), Gaps = 4/249 (1%)
 Frame = +2

Query: 488  YNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNE 667
            YN +I    +   ++ A++   KM  +G   D V ++ +I    ++       LH+   E
Sbjct: 434  YNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAE------LHERAEE 487

Query: 668  LEADRIELDGQ----LSNDLIVAFAKAGDPDRAMVFLAMFEGQGLSPKTATLVAVISALG 835
            L  + +E          N +I +F +    D     +      GL P   T   +I   G
Sbjct: 488  LFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYG 547

Query: 836  NSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAESIVSEMERGGVSPDEH 1015
             SGR  +A    E+MK  G+KP +  YNAL+  Y + G    A +    M    + P   
Sbjct: 548  KSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLL 607

Query: 1016 TYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASYRDRGDWQKSFSVLREM 1195
              + LI+A+    R   A  VLK M+E++++P+   ++ ++ +      + K  SV  EM
Sbjct: 608  ALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFNKVPSVYEEM 667

Query: 1196 RCNGVSPDR 1222
               G +PDR
Sbjct: 668  ILAGCTPDR 676



 Score = 75.9 bits (185), Expect = 4e-11
 Identities = 51/205 (24%), Positives = 94/205 (45%)
 Frame = +2

Query: 425  RSQKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLI 604
            R+++L+E  ++ +       T+N +I +       +    LMG MR  G L + V Y+ +
Sbjct: 484  RAEELFEE-MMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTL 542

Query: 605  IQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQ 784
            I    +S +    I  +   ++++  ++    + N LI A+A+ G  ++A+    +    
Sbjct: 543  IDIYGKSGRFSDAI--ECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRAD 600

Query: 785  GLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDA 964
             L P    L ++I+A G   R  EA +V + MKE  +KP    Y  L+K  ++       
Sbjct: 601  SLKPSLLALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFNKV 660

Query: 965  ESIVSEMERGGVSPDEHTYSLLIDA 1039
             S+  EM   G +PD    ++L  A
Sbjct: 661  PSVYEEMILAGCTPDRKARAMLRSA 685


>ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Cucumis sativus]
            gi|449489420|ref|XP_004158306.1| PREDICTED:
            pentatricopeptide repeat-containing protein At5g42310,
            mitochondrial-like [Cucumis sativus]
          Length = 720

 Score =  543 bits (1398), Expect = e-152
 Identities = 255/353 (72%), Positives = 310/353 (87%)
 Frame = +2

Query: 248  RLVESYRAVPAPLWHSVLKSLTSSPSTLHTAYALVEWLQTHNLCFSYDLLYSILIHALGR 427
            +L E+YRAVPAPLWHS+LKSL SS S++   YA+V WLQ HNLCFSY+LLYSILIHALGR
Sbjct: 132  QLAEAYRAVPAPLWHSLLKSLCSSSSSIGLGYAVVSWLQRHNLCFSYELLYSILIHALGR 191

Query: 428  SQKLYEAFLLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLII 607
            S+KLYEAF+LSQ+  LTPLTYNALIGAC RN D+EKALNLM +MR+DGF SD++NYSLII
Sbjct: 192  SEKLYEAFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFINYSLII 251

Query: 608  QSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQG 787
            QSLTR+NK+D+ +L KLY E+E+D+IELDG L ND+I+ FAKAGDP+RA+ FL+M +  G
Sbjct: 252  QSLTRTNKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASG 311

Query: 788  LSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAE 967
            L+PKT+T VAVISALGN GRT EAEA+FEEMKEGG+KPR +A+NALLKGY + GSL++AE
Sbjct: 312  LNPKTSTFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAE 371

Query: 968  SIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASY 1147
            SI+SEME+ G+SPDEHTY LL+DAYAN GRWESAR +LK+ME  NVQPN+++FSRILASY
Sbjct: 372  SIISEMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASY 431

Query: 1148 RDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
            RDRG+WQK+F VLREM+ + V PDRHFYNVMIDTFGK+NCL+H + T++RM S
Sbjct: 432  RDRGEWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLS 484



 Score = 97.8 bits (242), Expect = 9e-18
 Identities = 60/297 (20%), Positives = 129/297 (43%), Gaps = 2/297 (0%)
 Frame = +2

Query: 422  GRSQKLYEAFLLSQRHDLTPL--TYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNY 595
            GR+++    F   +   L P    +NAL+    R G +++A +++ +M + G   D   Y
Sbjct: 330  GRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTY 389

Query: 596  SLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMF 775
             L++ +     + +      L  ++EA  ++ +  + + ++ ++   G+  +    L   
Sbjct: 390  GLLVDAYANVGRWESA--RHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREM 447

Query: 776  EGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSL 955
            +   + P       +I   G       A   ++ M   G++P    +N L+  + K G  
Sbjct: 448  KNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYH 507

Query: 956  RDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRI 1135
              A  +  EM+  G  P   TY+++I++     +W+  +I+L +M+   + PN   ++ +
Sbjct: 508  DRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTL 567

Query: 1136 LASYRDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
            +  Y   G +  +   L  M+  G+ P    YN +I+ F +    E  V+ +  M S
Sbjct: 568  VDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMIS 624



 Score = 94.0 bits (232), Expect = 1e-16
 Identities = 73/307 (23%), Positives = 141/307 (45%), Gaps = 6/307 (1%)
 Frame = +2

Query: 398  YSILIHA---LGRSQKLYEAFLLSQRHDLTPLTY--NALIGACTRNGDIEKALNLMGKMR 562
            Y +L+ A   +GR +         +  ++ P T+  + ++ +    G+ +K   ++ +M+
Sbjct: 389  YGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGEWQKTFEVLREMK 448

Query: 563  RDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGD 742
                  D   Y+++I +  + N LD  +  + Y+ + ++ IE D    N LI    K G 
Sbjct: 449  NSNVKPDRHFYNVMIDTFGKFNCLDHAM--ETYDRMLSEGIEPDVVTWNTLIDCHRKHGY 506

Query: 743  PDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNA 922
             DRA       + +G  P   T   +I++LG   +  E + +  +M+  G+ P    Y  
Sbjct: 507  HDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTT 566

Query: 923  LLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESN 1102
            L+  Y  SG   DA   +  M+  G+ P    Y+ LI+A+A  G  E A    + M    
Sbjct: 567  LVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDG 626

Query: 1103 VQPNSYVFSRILASY-RDRGDWQKSFSVLREMRCNGVSPDRHFYNVMIDTFGKYNCLEHV 1279
            ++P+    + ++ ++  DR D + +FS+L+ M+ N V PD   Y  ++    + +  + V
Sbjct: 627  LRPSLLALNSLINAFGEDRRDIE-AFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKV 685

Query: 1280 VSTFERM 1300
             + +E M
Sbjct: 686  PAVYEEM 692



 Score = 93.6 bits (231), Expect = 2e-16
 Identities = 63/274 (22%), Positives = 117/274 (42%)
 Frame = +2

Query: 485  TYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYN 664
            T+ A+I A   +G  E+A  +  +M+  G       ++ +++   R   L       + +
Sbjct: 318  TFVAVISALGNHGRTEEAEAIFEEMKEGGLKPRIKAFNALLKGYARKGSLKEA--ESIIS 375

Query: 665  ELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQGLSPKTATLVAVISALGNSG 844
            E+E   +  D      L+ A+A  G  + A   L   E + + P T     ++++  + G
Sbjct: 376  EMEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRG 435

Query: 845  RTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYS 1024
               +   V  EMK   VKP    YN ++  + K   L  A      M   G+ PD  T++
Sbjct: 436  EWQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWN 495

Query: 1025 LLIDAYANAGRWESARIVLKEMEESNVQPNSYVFSRILASYRDRGDWQKSFSVLREMRCN 1204
             LID +   G  + A  + +EM+E    P    ++ ++ S  ++  W +   +L +M+  
Sbjct: 496  TLIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQ 555

Query: 1205 GVSPDRHFYNVMIDTFGKYNCLEHVVSTFERMKS 1306
            G+ P+   Y  ++D +G        +   E MKS
Sbjct: 556  GLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKS 589



 Score = 84.7 bits (208), Expect = 8e-14
 Identities = 66/279 (23%), Positives = 116/279 (41%), Gaps = 5/279 (1%)
 Frame = +2

Query: 398  YSILIHALGRSQKLYEAF-----LLSQRHDLTPLTYNALIGACTRNGDIEKALNLMGKMR 562
            Y+++I   G+   L  A      +LS+  +   +T+N LI    ++G  ++A  L  +M+
Sbjct: 459  YNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQ 518

Query: 563  RDGFLSDYVNYSLIIQSLTRSNKLDLGILHKLYNELEADRIELDGQLSNDLIVAFAKAGD 742
              G+L     Y+++I SL    K D                                   
Sbjct: 519  ERGYLPCPTTYNIMINSLGEQEKWD----------------------------------- 543

Query: 743  PDRAMVFLAMFEGQGLSPKTATLVAVISALGNSGRTVEAEAVFEEMKEGGVKPRTRAYNA 922
                 + L   + QGL P   T   ++   G+SGR  +A    E MK  G+KP    YNA
Sbjct: 544  --EVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNA 601

Query: 923  LLKGYVKSGSLRDAESIVSEMERGGVSPDEHTYSLLIDAYANAGRWESARIVLKEMEESN 1102
            L+  + + G    A +    M   G+ P     + LI+A+    R   A  +L+ M+E++
Sbjct: 602  LINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGEDRRDIEAFSILQYMKEND 661

Query: 1103 VQPNSYVFSRILASYRDRGDWQKSFSVLREMRCNGVSPD 1219
            V+P+   ++ ++ +      + K  +V  EM  +G +PD
Sbjct: 662  VKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPD 700



 Score = 77.8 bits (190), Expect = 1e-11
 Identities = 49/187 (26%), Positives = 87/187 (46%)
 Frame = +2

Query: 479  PLTYNALIGACTRNGDIEKALNLMGKMRRDGFLSDYVNYSLIIQSLTRSNKLDLGILHKL 658
            P TYN +I +       ++   L+GKM+  G L + V Y+ ++     S + +  I    
Sbjct: 526  PTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAI--DC 583

Query: 659  YNELEADRIELDGQLSNDLIVAFAKAGDPDRAMVFLAMFEGQGLSPKTATLVAVISALGN 838
               +++  ++    + N LI AFA+ G  ++A+    +    GL P    L ++I+A G 
Sbjct: 584  LEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAFGE 643

Query: 839  SGRTVEAEAVFEEMKEGGVKPRTRAYNALLKGYVKSGSLRDAESIVSEMERGGVSPDEHT 1018
              R +EA ++ + MKE  VKP    Y  L+K  ++        ++  EM   G +PD   
Sbjct: 644  DRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVYEEMILSGCTPDGKA 703

Query: 1019 YSLLIDA 1039
             ++L  A
Sbjct: 704  RAMLRSA 710


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