BLASTX nr result
ID: Sinomenium22_contig00010941
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00010941
(729 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour... 115 2e-23
ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chlor... 115 2e-23
ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chlor... 115 2e-23
emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera] 115 2e-23
ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor... 114 4e-23
ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chl... 113 6e-23
ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chl... 112 1e-22
ref|XP_003523282.1| PREDICTED: RNA pseudouridine synthase 2, chl... 111 3e-22
ref|XP_007136120.1| hypothetical protein PHAVU_009G019500g [Phas... 110 5e-22
ref|XP_007136119.1| hypothetical protein PHAVU_009G019500g [Phas... 110 5e-22
ref|XP_006828851.1| hypothetical protein AMTR_s00001p00157430 [A... 108 2e-21
ref|XP_007017901.1| Pseudouridine synthase family protein isofor... 107 3e-21
ref|XP_007017900.1| Pseudouridine synthase family protein isofor... 107 3e-21
ref|XP_002439034.1| hypothetical protein SORBIDRAFT_10g030300 [S... 107 3e-21
ref|XP_004966473.1| PREDICTED: RNA pseudouridine synthase 2, chl... 106 7e-21
ref|XP_003563280.1| PREDICTED: RNA pseudourine synthase 2, chlor... 106 7e-21
ref|XP_002301949.1| pseudouridine synthase family protein [Popul... 106 9e-21
ref|NP_001058594.1| Os06g0717400 [Oryza sativa Japonica Group] g... 104 4e-20
ref|XP_002887624.1| T4O12.25 [Arabidopsis lyrata subsp. lyrata] ... 104 4e-20
gb|EEC81320.1| hypothetical protein OsI_24484 [Oryza sativa Indi... 104 4e-20
>ref|XP_004161095.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 2,
chloroplastic-like [Cucumis sativus]
Length = 452
Score = 115 bits (288), Expect = 2e-23
Identities = 54/80 (67%), Positives = 63/80 (78%)
Frame = -2
Query: 728 GDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGFKHPSTGEFLQFSC 549
GDEVYGGTKSMAMSLL+ + ++C L QLVS L+RPCLHALTLGF HP TG+ ++FSC
Sbjct: 346 GDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSC 405
Query: 548 PPPMDFAEILCLLRSIKTEK 489
PPP DF EIL LR I T+K
Sbjct: 406 PPPTDFTEILSQLREIGTQK 425
>ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cucumis
sativus]
Length = 453
Score = 115 bits (288), Expect = 2e-23
Identities = 54/80 (67%), Positives = 63/80 (78%)
Frame = -2
Query: 728 GDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGFKHPSTGEFLQFSC 549
GDEVYGGTKSMAMSLL+ + ++C L QLVS L+RPCLHALTLGF HP TG+ ++FSC
Sbjct: 347 GDEVYGGTKSMAMSLLRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSC 406
Query: 548 PPPMDFAEILCLLRSIKTEK 489
PPP DF EIL LR I T+K
Sbjct: 407 PPPTDFTEILSQLREIGTQK 426
>ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Solanum
lycopersicum]
Length = 436
Score = 115 bits (287), Expect = 2e-23
Identities = 57/85 (67%), Positives = 66/85 (77%)
Frame = -2
Query: 728 GDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGFKHPSTGEFLQFSC 549
GDEVYGGTK+MA+SLLQPKTP L QLVS++ RPCLHALTLGF+HP TGE + F+
Sbjct: 350 GDEVYGGTKNMALSLLQPKTPPMFHGELSQLVSQIDRPCLHALTLGFRHPFTGENIHFTR 409
Query: 548 PPPMDFAEILCLLRSIKTEKRSTKN 474
PP DFAEIL LR+IKTEK + N
Sbjct: 410 LPPPDFAEILSELRAIKTEKVTHPN 434
>emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]
Length = 611
Score = 115 bits (287), Expect = 2e-23
Identities = 54/81 (66%), Positives = 63/81 (77%)
Frame = -2
Query: 728 GDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGFKHPSTGEFLQFSC 549
GDEVYGGTK+MA+SLL+P+ P+S L QLVS+L RPCLHA+ LGF HP TG+ + FSC
Sbjct: 494 GDEVYGGTKNMALSLLRPRIPSSHHGQLAQLVSRLDRPCLHAVALGFNHPKTGKNVHFSC 553
Query: 548 PPPMDFAEILCLLRSIKTEKR 486
PP DFAEIL LR I TEKR
Sbjct: 554 QPPEDFAEILSWLRKISTEKR 574
>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
product [Vitis vinifera]
Length = 433
Score = 114 bits (284), Expect = 4e-23
Identities = 53/81 (65%), Positives = 63/81 (77%)
Frame = -2
Query: 728 GDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGFKHPSTGEFLQFSC 549
GDEVYGGTK+MA+SLL+P+ P+S L QLVS+L RPCLHA+ LGF HP TG+ + FSC
Sbjct: 348 GDEVYGGTKNMALSLLRPRIPSSHHGQLAQLVSRLDRPCLHAVALGFNHPKTGKNVHFSC 407
Query: 548 PPPMDFAEILCLLRSIKTEKR 486
PP DFAEIL LR I TEK+
Sbjct: 408 QPPEDFAEILSWLRKISTEKK 428
>ref|XP_006342081.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
[Solanum tuberosum]
Length = 431
Score = 113 bits (283), Expect = 6e-23
Identities = 55/80 (68%), Positives = 63/80 (78%)
Frame = -2
Query: 728 GDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGFKHPSTGEFLQFSC 549
GDEVYGGTK+MA+SLLQPKTP L QLVS++ RPCLHALTLGF+HP TGE + F+
Sbjct: 350 GDEVYGGTKNMALSLLQPKTPPMFHGKLSQLVSQIDRPCLHALTLGFRHPFTGENIHFTR 409
Query: 548 PPPMDFAEILCLLRSIKTEK 489
PP DFAEIL LR+I TEK
Sbjct: 410 LPPPDFAEILSYLRAINTEK 429
>ref|XP_006473714.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like [Citrus
sinensis]
Length = 421
Score = 112 bits (280), Expect = 1e-22
Identities = 55/83 (66%), Positives = 62/83 (74%)
Frame = -2
Query: 728 GDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGFKHPSTGEFLQFSC 549
GDEVYGGTK+MA SLLQP+T + +LVS LQRPCLHA+ LGF HP T E +QFSC
Sbjct: 338 GDEVYGGTKNMAKSLLQPRTAPGSHGKVLKLVSGLQRPCLHAVALGFTHPHTREKIQFSC 397
Query: 548 PPPMDFAEILCLLRSIKTEKRST 480
PPP DFAEIL LR I TEK S+
Sbjct: 398 PPPADFAEILSQLREIGTEKLSS 420
>ref|XP_003523282.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like isoform
X1 [Glycine max] gi|571448797|ref|XP_006577958.1|
PREDICTED: RNA pseudouridine synthase 2,
chloroplastic-like isoform X2 [Glycine max]
Length = 450
Score = 111 bits (277), Expect = 3e-22
Identities = 53/89 (59%), Positives = 66/89 (74%)
Frame = -2
Query: 728 GDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGFKHPSTGEFLQFSC 549
GDE+YGGTKSM +SLL+P+TP S + + ++VS+L RPCLHA TLGF+HP TGE + FSC
Sbjct: 362 GDELYGGTKSMVLSLLRPRTPISLHSKIVKMVSRLDRPCLHAWTLGFQHPHTGEQVHFSC 421
Query: 548 PPPMDFAEILCLLRSIKTEKRSTKNQSGS 462
PP DFAEIL LR I +E S +S S
Sbjct: 422 EPPADFAEILSQLRRIGSETVSFTKRSNS 450
>ref|XP_007136120.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris]
gi|561009207|gb|ESW08114.1| hypothetical protein
PHAVU_009G019500g [Phaseolus vulgaris]
Length = 447
Score = 110 bits (275), Expect = 5e-22
Identities = 53/87 (60%), Positives = 63/87 (72%)
Frame = -2
Query: 728 GDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGFKHPSTGEFLQFSC 549
GDEVYGGTKSM +SLL+P++P S + Q+VS L RPCLHALTLGF+HP TGE + FSC
Sbjct: 359 GDEVYGGTKSMVLSLLRPRSPISLHGKIVQMVSSLDRPCLHALTLGFQHPHTGEQVHFSC 418
Query: 548 PPPMDFAEILCLLRSIKTEKRSTKNQS 468
PP+DF EIL LR I +E S S
Sbjct: 419 EPPVDFDEILSQLRRIGSESVSFSKPS 445
>ref|XP_007136119.1| hypothetical protein PHAVU_009G019500g [Phaseolus vulgaris]
gi|561009206|gb|ESW08113.1| hypothetical protein
PHAVU_009G019500g [Phaseolus vulgaris]
Length = 458
Score = 110 bits (275), Expect = 5e-22
Identities = 53/87 (60%), Positives = 63/87 (72%)
Frame = -2
Query: 728 GDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGFKHPSTGEFLQFSC 549
GDEVYGGTKSM +SLL+P++P S + Q+VS L RPCLHALTLGF+HP TGE + FSC
Sbjct: 370 GDEVYGGTKSMVLSLLRPRSPISLHGKIVQMVSSLDRPCLHALTLGFQHPHTGEQVHFSC 429
Query: 548 PPPMDFAEILCLLRSIKTEKRSTKNQS 468
PP+DF EIL LR I +E S S
Sbjct: 430 EPPVDFDEILSQLRRIGSESVSFSKPS 456
>ref|XP_006828851.1| hypothetical protein AMTR_s00001p00157430 [Amborella trichopoda]
gi|548833830|gb|ERM96267.1| hypothetical protein
AMTR_s00001p00157430 [Amborella trichopoda]
Length = 452
Score = 108 bits (269), Expect = 2e-21
Identities = 54/88 (61%), Positives = 65/88 (73%)
Frame = -2
Query: 728 GDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGFKHPSTGEFLQFSC 549
GDEVYGGTKSMA+S L+P+TP+ L QLVS LQRPCLHA +LGFKHP + E + F+C
Sbjct: 356 GDEVYGGTKSMALSRLRPRTPSHYHGPLSQLVSNLQRPCLHAFSLGFKHPHSKENVLFTC 415
Query: 548 PPPMDFAEILCLLRSIKTEKRSTKNQSG 465
PPP DFAE+L L+SI RS+ N G
Sbjct: 416 PPPPDFAEVLRQLQSI----RSSNNHGG 439
>ref|XP_007017901.1| Pseudouridine synthase family protein isoform 2, partial [Theobroma
cacao] gi|508723229|gb|EOY15126.1| Pseudouridine
synthase family protein isoform 2, partial [Theobroma
cacao]
Length = 409
Score = 107 bits (268), Expect = 3e-21
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = -2
Query: 728 GDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGFKHPSTGEFLQFSC 549
GDEVYGGTKSMA+SLL+P+TP + L +LVS+L+RP LHAL LGF+HP + E + FSC
Sbjct: 325 GDEVYGGTKSMALSLLRPRTPPNYNDQLSRLVSRLERPYLHALVLGFEHPHSREMMHFSC 384
Query: 548 PPPMDFAEILCLLRSIKTEKRSTK 477
PP DFAEIL LR I TEK + K
Sbjct: 385 QPPPDFAEILSDLRKIGTEKPTFK 408
>ref|XP_007017900.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
gi|508723228|gb|EOY15125.1| Pseudouridine synthase
family protein isoform 1 [Theobroma cacao]
Length = 433
Score = 107 bits (268), Expect = 3e-21
Identities = 53/84 (63%), Positives = 64/84 (76%)
Frame = -2
Query: 728 GDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGFKHPSTGEFLQFSC 549
GDEVYGGTKSMA+SLL+P+TP + L +LVS+L+RP LHAL LGF+HP + E + FSC
Sbjct: 349 GDEVYGGTKSMALSLLRPRTPPNYNDQLSRLVSRLERPYLHALVLGFEHPHSREMMHFSC 408
Query: 548 PPPMDFAEILCLLRSIKTEKRSTK 477
PP DFAEIL LR I TEK + K
Sbjct: 409 QPPPDFAEILSDLRKIGTEKPTFK 432
>ref|XP_002439034.1| hypothetical protein SORBIDRAFT_10g030300 [Sorghum bicolor]
gi|241917257|gb|EER90401.1| hypothetical protein
SORBIDRAFT_10g030300 [Sorghum bicolor]
Length = 441
Score = 107 bits (268), Expect = 3e-21
Identities = 47/76 (61%), Positives = 61/76 (80%)
Frame = -2
Query: 728 GDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGFKHPSTGEFLQFSC 549
GDE YGGTKSMA+SLL+P+TP+ ++L L+SK+ RPCLHA LGFKHP +G+ L+FSC
Sbjct: 354 GDETYGGTKSMALSLLRPRTPSKYHSDLSNLISKVDRPCLHAALLGFKHPHSGKILEFSC 413
Query: 548 PPPMDFAEILCLLRSI 501
PPP DF+E+L LR +
Sbjct: 414 PPPDDFSEVLDELRKV 429
>ref|XP_004966473.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
[Setaria italica]
Length = 437
Score = 106 bits (265), Expect = 7e-21
Identities = 47/76 (61%), Positives = 59/76 (77%)
Frame = -2
Query: 728 GDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGFKHPSTGEFLQFSC 549
GDE YGGTKSMA+SLL+P+TP+ + L L+SK+ RPCLHA LGFKHP +G+ L+FSC
Sbjct: 349 GDETYGGTKSMALSLLRPRTPSKYHSGLSDLISKVDRPCLHAALLGFKHPHSGKILEFSC 408
Query: 548 PPPMDFAEILCLLRSI 501
PPP DF E+L LR +
Sbjct: 409 PPPDDFTEVLDELRRV 424
>ref|XP_003563280.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like
[Brachypodium distachyon]
Length = 439
Score = 106 bits (265), Expect = 7e-21
Identities = 47/76 (61%), Positives = 60/76 (78%)
Frame = -2
Query: 728 GDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGFKHPSTGEFLQFSC 549
GDE YGG+KSMA+SLL+P+TP+ +L L+SK+ RPCLHA LGFKHP +G+ L+FSC
Sbjct: 348 GDETYGGSKSMALSLLRPRTPSRYHGDLSNLISKIDRPCLHAALLGFKHPHSGKMLEFSC 407
Query: 548 PPPMDFAEILCLLRSI 501
PPP DFAE+L LR +
Sbjct: 408 PPPDDFAEVLDELRRV 423
>ref|XP_002301949.1| pseudouridine synthase family protein [Populus trichocarpa]
gi|222843675|gb|EEE81222.1| pseudouridine synthase
family protein [Populus trichocarpa]
Length = 444
Score = 106 bits (264), Expect = 9e-21
Identities = 51/84 (60%), Positives = 61/84 (72%)
Frame = -2
Query: 728 GDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGFKHPSTGEFLQFSC 549
GDEVYGGT++MA+SLL+ +T SC L +S L+RPCLHAL LGF HP TG+ + FSC
Sbjct: 360 GDEVYGGTQNMALSLLRSRTQPSCHRQLSLSLSGLERPCLHALALGFTHPCTGKEIHFSC 419
Query: 548 PPPMDFAEILCLLRSIKTEKRSTK 477
PPP DF EIL LR + TEK S K
Sbjct: 420 PPPPDFTEILSQLREMGTEKLSFK 443
>ref|NP_001058594.1| Os06g0717400 [Oryza sativa Japonica Group]
gi|75252835|sp|Q5Z8P2.1|PUS2_ORYSJ RecName: Full=RNA
pseudouridine synthase 2, chloroplastic; AltName:
Full=RNA pseudouridylate synthase 2; AltName:
Full=RNA-uridine isomerase 2; Flags: Precursor
gi|53791796|dbj|BAD53590.1| ribosomal large subunit
pseudouridine synthase-like [Oryza sativa Japonica
Group] gi|54291043|dbj|BAD61720.1| ribosomal large
subunit pseudouridine synthase-like [Oryza sativa
Japonica Group] gi|113596634|dbj|BAF20508.1|
Os06g0717400 [Oryza sativa Japonica Group]
gi|215706335|dbj|BAG93191.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|222636236|gb|EEE66368.1| hypothetical protein
OsJ_22675 [Oryza sativa Japonica Group]
Length = 445
Score = 104 bits (259), Expect = 4e-20
Identities = 45/76 (59%), Positives = 58/76 (76%)
Frame = -2
Query: 728 GDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGFKHPSTGEFLQFSC 549
GDE YGGTKSMA+SLL+P+TP+ +L ++SK+ RPCLHA LGFKHP +G+ L+FSC
Sbjct: 353 GDETYGGTKSMALSLLRPRTPSRYHCDLSNMISKIDRPCLHAALLGFKHPHSGKILEFSC 412
Query: 548 PPPMDFAEILCLLRSI 501
PPP DF E+L L +
Sbjct: 413 PPPDDFTEVLNELHQV 428
>ref|XP_002887624.1| T4O12.25 [Arabidopsis lyrata subsp. lyrata]
gi|297333465|gb|EFH63883.1| T4O12.25 [Arabidopsis lyrata
subsp. lyrata]
Length = 930
Score = 104 bits (259), Expect = 4e-20
Identities = 48/80 (60%), Positives = 60/80 (75%)
Frame = -2
Query: 728 GDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGFKHPSTGEFLQFSC 549
GDEVYGGTKSMA+SLLQ + S + + +L+S++ RPCLHA+ LGF HP TGE ++FSC
Sbjct: 842 GDEVYGGTKSMALSLLQKRVSRSDQEEIVELISRMDRPCLHAIVLGFTHPCTGEIVKFSC 901
Query: 548 PPPMDFAEILCLLRSIKTEK 489
PPP D AEI+ LLR EK
Sbjct: 902 PPPSDLAEIVGLLRRSGLEK 921
>gb|EEC81320.1| hypothetical protein OsI_24484 [Oryza sativa Indica Group]
Length = 445
Score = 104 bits (259), Expect = 4e-20
Identities = 45/76 (59%), Positives = 58/76 (76%)
Frame = -2
Query: 728 GDEVYGGTKSMAMSLLQPKTPASCRANLCQLVSKLQRPCLHALTLGFKHPSTGEFLQFSC 549
GDE YGGTKSMA+SLL+P+TP+ +L ++SK+ RPCLHA LGFKHP +G+ L+FSC
Sbjct: 353 GDETYGGTKSMALSLLRPRTPSRYHCDLSNMISKIDRPCLHAALLGFKHPHSGKILEFSC 412
Query: 548 PPPMDFAEILCLLRSI 501
PPP DF E+L L +
Sbjct: 413 PPPDDFTEVLNELHQV 428