BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00010820
         (2270 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Tritic...    87   2e-30
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac...    68   8e-25
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    87   5e-24
gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]          64   6e-24
emb|CCH50976.1| T4.15 [Malus x robusta]                                61   6e-24
gb|EXB39515.1| Solanesyl diphosphate synthase 3 [Morus notabilis]      74   2e-22
gb|EMS60091.1| Retinoblastoma-related protein 1 [Triticum urartu]      67   4e-20
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840...    84   2e-19
gb|EXC04195.1| Protein IQ-DOMAIN 32 [Morus notabilis]                  71   3e-19
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...    69   5e-19
gb|AAT40504.2| Polyprotein, putative [Solanum demissum]                87   2e-18
ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from ...    82   8e-17
gb|EMS52533.1| ATP-citrate synthase [Triticum urartu]                  87   8e-16
gb|EMT16429.1| hypothetical protein F775_01472 [Aegilops tauschii]     91   3e-15
emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [He...    48   6e-15
gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...    51   1e-14
gb|EHJ71530.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...    51   1e-14
gb|EHJ75084.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...    51   1e-14
gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...    51   2e-14
gb|EHJ71992.1| endonuclease-reverse transcriptase HmRTE-e01 [Dan...    51   2e-14

>gb|EMS49379.1| Retrovirus-related Pol polyprotein LINE-1 [Triticum urartu]
          Length = 882

 Score = 87.4 bits (215), Expect(4) = 2e-30
 Identities = 47/91 (51%), Positives = 63/91 (69%), Gaps = 2/91 (2%)
 Frame = +2

Query: 110 LKPYLFALVIDELT--IQKDIPW*ALFTDDIALIDGTKLGANAKLEVW**TLESRRFKLS 283
           L PYLFALV+DE+T  IQ DIPW  LF DD+ L+D ++ G N KLE+W  TLES+ F+LS
Sbjct: 235 LSPYLFALVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKLELWRQTLESKGFRLS 294

Query: 284 RIKSKYIK*NFS*SRNESGEEVKIKNQEISK 376
           R K++Y+   FS +R E  EEV +  Q + +
Sbjct: 295 RTKTEYMMCGFSTTRCEE-EEVSLDGQVVPR 324



 Score = 50.4 bits (119), Expect(4) = 2e-30
 Identities = 27/61 (44%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
 Frame = +1

Query: 442 HRIKES*AKWGNDSGILYN*PILLKAKGKFYKNAIRATMLYKTIFWAI-RKHVNNLSVTE 618
           HRIK    KW   SGIL +  +  K KGKFY+  +R  MLY    W   R+HV  L V E
Sbjct: 347 HRIKAGWMKWRQASGILCDKRVPQKLKGKFYRTVVRPAMLYGAECWPTKRRHVQQLDVAE 406

Query: 619 L 621
           +
Sbjct: 407 M 407



 Score = 38.1 bits (87), Expect(4) = 2e-30
 Identities = 22/51 (43%), Positives = 29/51 (56%)
 Frame = +3

Query: 648 MKMLRCISGKSKSPKDKIRKVHISKG*K*LQFEIK*EKNGLRWFGHIQQRP 800
           M MLRC+ G ++  KD++R   I         E K  ++ LRWFGHIQ RP
Sbjct: 407 MCMLRCMCGHTR--KDRVRNDDIRDRVGVAPIEEKLVQHRLRWFGHIQHRP 455



 Score = 26.2 bits (56), Expect(4) = 2e-30
 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 25/63 (39%)
 Frame = +3

Query: 3   EKAYDRVSRDLIW-------------------------LVKTTI*KTS*FSVSLVVHQGS 107
           EKAYD++ R+++W                          V+T+   T  F + + +HQGS
Sbjct: 174 EKAYDKIPRNVMWWALEKHKVPAKYITLIKDMYDNVVTSVRTSDVDTDDFPIKIGLHQGS 233

Query: 108 TLS 116
            LS
Sbjct: 234 ALS 236


>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1939

 Score = 68.2 bits (165), Expect(4) = 8e-25
 Identities = 39/92 (42%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
 Frame = +2

Query: 107  NLKPYLFALVIDELT--IQKDIPW*ALFTDDIALIDGTKLGANAKLEVW**TLESRRFKL 280
            +L PYLF LV++ LT  IQ+ +PW  LF DDI L+  ++   N KLE+W   LE    ++
Sbjct: 1118 SLSPYLFTLVLEVLTEHIQEPVPWCMLFADDIVLMGESREDLNKKLELWREALEVYGLRI 1177

Query: 281  SRIKSKYIK*NFS*SRNESGEEVKIKNQEISK 376
            SR K++Y++  FS  R  S  EVKI    + K
Sbjct: 1178 SRSKTEYMECKFSLRRENSNIEVKIGENILRK 1209



 Score = 54.3 bits (129), Expect(4) = 8e-25
 Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
 Frame = +1

Query: 442  HRIKES*AKWGNDSGILYN*PILLKAKGKFYKNAIRATMLYKTIFWAIR-KHVNNLSVTE 618
            HRI+   +KW + SG + +  + LK KGKFY+ AIR  MLY T  WA + +H + LSV E
Sbjct: 1232 HRIQAGWSKWRSASGFICDKKVPLKLKGKFYRTAIRPAMLYGTECWAAKGEHEHKLSVAE 1291

Query: 619  L 621
            +
Sbjct: 1292 M 1292



 Score = 38.5 bits (88), Expect(4) = 8e-25
 Identities = 22/62 (35%), Positives = 36/62 (58%)
 Frame = +3

Query: 648  MKMLRCISGKSKSPKDKIRKVHISKG*K*LQFEIK*EKNGLRWFGHIQQRPLNMSIRKIN 827
            MKMLR +SG ++   DKIR   I +         K  ++ LRWFGH+ +RP+   +R+++
Sbjct: 1292 MKMLRWMSGHTRL--DKIRNEDIRERVGVAPIVEKMVESRLRWFGHVGRRPIEHLVRRVD 1349

Query: 828  AL 833
             +
Sbjct: 1350 EM 1351



 Score = 21.9 bits (45), Expect(4) = 8e-25
 Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 4/40 (10%)
 Frame = +3

Query: 9    AYDRVSRDLI----WLVKTTI*KTS*FSVSLVVHQGSTLS 116
            AY R  +D+       VKT    T  F + + +HQGS+LS
Sbjct: 1081 AYIRAIKDMYEGATTSVKTQGGVTEEFPIGIGLHQGSSLS 1120


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           domestica]
          Length = 622

 Score = 86.7 bits (213), Expect(3) = 5e-24
 Identities = 54/115 (46%), Positives = 75/115 (65%), Gaps = 2/115 (1%)
 Frame = +2

Query: 107 NLKPYLFALVIDELT--IQKDIPW*ALFTDDIALIDGTKLGANAKLEVW**TLESRRFKL 280
           +L PYLFALV+DELT  IQ DIPW  LF  DI LID T+ G NAKL +W   LES+   L
Sbjct: 370 SLSPYLFALVMDELTGHIQDDIPWCMLFAYDIVLIDETQEGVNAKLNLWREVLESKGLCL 429

Query: 281 SRIKSKYIK*NFS*SRNESGEEVKIKNQEISKNFR*VFRFNYSLGRRNKRDDASI 445
           SR K++Y++  FS + +++   V+I +QEI K+ R  FR+  S+ ++N   D  +
Sbjct: 430 SRSKTEYMECKFSANGSQNELGVRIGDQEIPKSDR--FRYLGSILQKNGELDEDL 482



 Score = 40.4 bits (93), Expect(3) = 5e-24
 Identities = 20/40 (50%), Positives = 26/40 (65%)
 Frame = +1

Query: 442 HRIKES*AKWGNDSGILYN*PILLKAKGKFYKNAIRATML 561
           HRI+    KW + SG+L +  + LK KGKFY+ AIR  ML
Sbjct: 484 HRIQAGWMKWKSASGVLCDRRMPLKLKGKFYRTAIRPAML 523



 Score = 33.5 bits (75), Expect(3) = 5e-24
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 25/63 (39%)
 Frame = +3

Query: 3   EKAYDRVSRDLIW-------------------------LVKTTI*KTS*FSVSLVVHQGS 107
           EKAYDRVSRD+IW                          V+T   +T  F +++ +HQGS
Sbjct: 310 EKAYDRVSRDIIWRILEKKGVRVAYIQAIKDMYEGAKTAVRTYEGQTESFPITVGLHQGS 369

Query: 108 TLS 116
           +LS
Sbjct: 370 SLS 372


>gb|AEL30343.1| RNA-directed DNA polymerase [Arachis hypogaea]
          Length = 562

 Score = 63.9 bits (154), Expect(4) = 6e-24
 Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
 Frame = +2

Query: 107 NLKPYLFALVIDELT--IQKDIPW*ALFTDDIALIDGTKLGANAKLEVW**TLESRRFKL 280
           +L PYLF +V++ LT  IQ+ +PW  LF DDI L+   +   N KLE+W   LE    ++
Sbjct: 260 SLSPYLFTIVLEVLTEHIQEPVPWCILFADDIVLMGELREDLNKKLELWKEALEVYGLRI 319

Query: 281 SRIKSKYIK*NFS*SRNESGEEVKIKNQEISK 376
           SR K++Y++  FS  R  +  EV+I    + K
Sbjct: 320 SRSKTEYMECKFSLRRENTNIEVEIGENILRK 351



 Score = 48.9 bits (115), Expect(4) = 6e-24
 Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
 Frame = +1

Query: 442 HRIKES*AKWGNDSGILYN*PILLKAKGKFYKNAIRATMLYKTIFWAIR-KHVNNLSVTE 618
           HRI+   +KW + SG + +  + LK KGKFY+ AIR  MLY T   A + +H + LSV E
Sbjct: 374 HRIQAGWSKWRSASGFICDKKVPLKLKGKFYRTAIRPAMLYGTECCAAKGEHEHKLSVAE 433

Query: 619 L 621
           +
Sbjct: 434 V 434



 Score = 38.5 bits (88), Expect(4) = 6e-24
 Identities = 21/62 (33%), Positives = 37/62 (59%)
 Frame = +3

Query: 648 MKMLRCISGKSKSPKDKIRKVHISKG*K*LQFEIK*EKNGLRWFGHIQQRPLNMSIRKIN 827
           +KMLR +SG ++   DKIR   I +         K  ++ LRWFGH+++RP+   +R+++
Sbjct: 434 VKMLRWMSGHTRL--DKIRNEDIRERVGVAPIVEKIVESRLRWFGHVRRRPIEHPVRRVD 491

Query: 828 AL 833
            +
Sbjct: 492 EM 493



 Score = 28.5 bits (62), Expect(4) = 6e-24
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 25/63 (39%)
 Frame = +3

Query: 3   EKAYDRVSRDLIW-------------------------LVKTTI*KTS*FSVSLVVHQGS 107
           EKAYDRV R+++W                          VKT    T  F + + +HQGS
Sbjct: 200 EKAYDRVPREVLWKVLEKMRVRIAYIRAIKDMYDGATTSVKTQGGVTEEFPIGIGLHQGS 259

Query: 108 TLS 116
           +LS
Sbjct: 260 SLS 262


>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 61.2 bits (147), Expect(3) = 6e-24
 Identities = 37/89 (41%), Positives = 56/89 (62%)
 Frame = +2

Query: 179 LFTDDIALIDGTKLGANAKLEVW**TLESRRFKLSRIKSKYIK*NFS*SRNESGEEVKIK 358
           LF DDI LID T+ G NAKL +W   LES+  +LSR K++Y++  FS +  ++   V+I 
Sbjct: 728 LFADDIVLIDETQEGVNAKLNLWREVLESKGLRLSRSKTEYMECKFSANGGQNELGVRIG 787

Query: 359 NQEISKNFR*VFRFNYSLGRRNKRDDASI 445
           +QEI K+ R  FR+  S+ ++N   D  +
Sbjct: 788 DQEIPKSDR--FRYLGSILQKNGELDGDL 814



 Score = 55.8 bits (133), Expect(3) = 6e-24
 Identities = 28/61 (45%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
 Frame = +1

Query: 442 HRIKES*AKWGNDSGILYN*PILLKAKGKFYKNAIRATMLYKTIFWAIR-KHVNNLSVTE 618
           HRI+    KW + SG+L +  + LK KGKFY+ AIR  MLY T  WA++ +HV+ + V E
Sbjct: 816 HRIQAGWMKWKSASGVLCDRRMPLKLKGKFYRTAIRPAMLYGTECWAVKHQHVHKMGVAE 875

Query: 619 L 621
           +
Sbjct: 876 M 876



 Score = 43.1 bits (100), Expect(3) = 6e-24
 Identities = 24/58 (41%), Positives = 35/58 (60%)
 Frame = +3

Query: 648  MKMLRCISGKSKSPKDKIRKVHISKG*K*LQFEIK*EKNGLRWFGHIQQRPLNMSIRK 821
            M+MLR + G ++  KDKIR   I       + + K  +N LRWFGH+Q+RP +  IR+
Sbjct: 876  MRMLRWMCGHTR--KDKIRNEDIRGKVGVAEIQGKMRENQLRWFGHVQRRPTDAPIRR 931


>gb|EXB39515.1| Solanesyl diphosphate synthase 3 [Morus notabilis]
          Length = 670

 Score = 73.9 bits (180), Expect(3) = 2e-22
 Identities = 43/96 (44%), Positives = 60/96 (62%), Gaps = 4/96 (4%)
 Frame = +2

Query: 110 LKPYLFALVIDELT--IQKDIPW*ALFTDDIALIDGTKLGANAKLEVW**TLESRRFKLS 283
           L PYL  +V+DELT  IQ  +PW   F  DI L+D  + G N KLE+W  TLE++ FKLS
Sbjct: 380 LSPYLITIVMDELTREIQDRVPWCMFFAGDIVLVDEHREGVNRKLELWKQTLETKGFKLS 439

Query: 284 RIKSKYIK*NFS*SRNESGEEVKIKNQEI--SKNFR 385
           R K++Y+   FS S N+S + + +   E+  S+ FR
Sbjct: 440 RTKTEYMHCRFSNSSNQS-DGISLDGVELGASRKFR 474



 Score = 56.6 bits (135), Expect(3) = 2e-22
 Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
 Frame = +1

Query: 439 QHRIKES*AKWGNDSGILYN*PILLKAKGKFYKNAIRATMLYKTIFWAI-RKHVNNLSVT 615
           +HRIK    KW N +G+L +  + +K KGKFY+  IR  MLY +  WAI R+H+  +SV 
Sbjct: 491 EHRIKAGWVKWKNVTGVLCDVEMPIKLKGKFYRTVIRPAMLYGSECWAIKRQHIAKMSVI 550

Query: 616 EL 621
           E+
Sbjct: 551 EM 552



 Score = 24.6 bits (52), Expect(3) = 2e-22
 Identities = 10/15 (66%), Positives = 13/15 (86%)
 Frame = +3

Query: 387 RYLGSIIH*EGEIKE 431
           RYLGSI+  EG+I+E
Sbjct: 474 RYLGSIVQYEGDIEE 488


>gb|EMS60091.1| Retinoblastoma-related protein 1 [Triticum urartu]
          Length = 747

 Score = 67.4 bits (163), Expect(3) = 4e-20
 Identities = 32/65 (49%), Positives = 45/65 (69%)
 Frame = +2

Query: 152 IQKDIPW*ALFTDDIALIDGTKLGANAKLEVW**TLESRRFKLSRIKSKYIK*NFS*SRN 331
           I +DIPW  LF DD+ L+D ++ G N KLE+W  TLES+ F+LSR K++Y+   FS +R 
Sbjct: 92  IHEDIPWCMLFVDDVVLVDDSRTGVNRKLELWRQTLESKGFRLSRTKTEYMMCGFSTTRC 151

Query: 332 ESGEE 346
           E  E+
Sbjct: 152 EEEED 156



 Score = 47.4 bits (111), Expect(3) = 4e-20
 Identities = 26/61 (42%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +1

Query: 442 HRIKES*AKWGNDSGILYN*PILLKAKGKFYKNAIRATMLYKTIFWAI-RKHVNNLSVTE 618
           HRIK    KW    GIL +  +  K KGKFY+  +R  MLY    W   R+HV  L V E
Sbjct: 165 HRIKAGWMKWRQAFGILCDKRVPQKLKGKFYRMTVRPAMLYGAECWLTKRRHVQQLGVAE 224

Query: 619 L 621
           +
Sbjct: 225 M 225



 Score = 32.3 bits (72), Expect(3) = 4e-20
 Identities = 20/52 (38%), Positives = 29/52 (55%)
 Frame = +3

Query: 648 MKMLRCISGKSKSPKDKIRKVHISKG*K*LQFEIK*EKNGLRWFGHIQQRPL 803
           M++LR + G ++  KD++R   I           K   + LRWFGHIQ+RPL
Sbjct: 225 MRVLRWMCGHTR--KDRVRNDDIRDRVGVAPIAEKLCPHRLRWFGHIQRRPL 274


>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
           distachyon]
          Length = 567

 Score = 83.6 bits (205), Expect(3) = 2e-19
 Identities = 58/161 (36%), Positives = 90/161 (55%), Gaps = 9/161 (5%)
 Frame = +2

Query: 110 LKPYLFALVIDELT--IQKDIPW*ALFTDDIALIDGTKLGANAKLEVW**TLESRRFKLS 283
           L PYLF LV+DE+T  IQ DIPW  LF DD+ L+D ++ G N KLE+W   LES+ F+LS
Sbjct: 285 LSPYLFDLVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKLELWRQILESKGFRLS 344

Query: 284 RIKSKYIK*NFS*SR-NESGEEVKIKNQEISKNFR*VFRFNYSLGRRNKRDDASIELK-- 454
           R K++Y+K  FS +   E  EEV +  Q + +  +  FR+  S+ +++   D  +  +  
Sbjct: 345 RTKTEYMKCGFSTTTPEEEEEEVSLDGQVVPQ--KDTFRYLGSMLQKDGDIDEDVNHRIK 402

Query: 455 ----KVRLSGGMILEYYIIDLSY*RRKGNFIRMPLGRPCFI 565
               K R + G++ +  +      + KG F R  + RP  +
Sbjct: 403 AGWMKWRQASGILCDKRVPQ----KLKGKFYRTAI-RPAIL 438



 Score = 35.0 bits (79), Expect(3) = 2e-19
 Identities = 20/56 (35%), Positives = 32/56 (57%)
 Frame = +3

Query: 648 MKMLRCISGKSKSPKDKIRKVHISKG*K*LQFEIK*EKNGLRWFGHIQQRPLNMSI 815
           M+MLR + G ++  +D++R   I           K  ++ LRWFGHIQ+RPL+  +
Sbjct: 459 MRMLRWMCGHTR--RDRVRNDDIRDRVGVAPIAEKLVQHRLRWFGHIQRRPLDAPV 512



 Score = 26.2 bits (56), Expect(3) = 2e-19
 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 25/63 (39%)
 Frame = +3

Query: 3   EKAYDRVSRDLIW-------------------------LVKTTI*KTS*FSVSLVVHQGS 107
           EKAYD++ R+++W                          V+T+   T  F + + +HQGS
Sbjct: 224 EKAYDKIPRNVMWWALEKHKVPAKYITLIKDMYDNVVTSVRTSDGDTDDFPIKIGLHQGS 283

Query: 108 TLS 116
            LS
Sbjct: 284 ALS 286


>gb|EXC04195.1| Protein IQ-DOMAIN 32 [Morus notabilis]
          Length = 1059

 Score = 71.2 bits (173), Expect(3) = 3e-19
 Identities = 42/78 (53%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
 Frame = +2

Query: 110 LKPYLFALVIDELT--IQKDIPW*ALFTDDIALIDGTKLGANAKLEVW**TLESRRFKLS 283
           L  YLF +VIDELT  IQ  IPW  LF DDI L+D    G N KLE W  TLE++ FKLS
Sbjct: 59  LSLYLFTIVIDELTREIQDGIPWCMLFADDIVLVDEHWEGINRKLERWRQTLEAQGFKLS 118

Query: 284 RIKSKYIK*NFS*SRNES 337
           RIK +Y+   F   R++S
Sbjct: 119 RIKIEYMHCRFGNLRDQS 136



 Score = 49.3 bits (116), Expect(3) = 3e-19
 Identities = 26/61 (42%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
 Frame = +1

Query: 442 HRIKES*AKWGNDSGILYN*PILLKAKGKFYKNAIRATMLYKTIFWAI-RKHVNNLSVTE 618
           H+I     KW N +G L +  + +K KGKFY+ AIR +MLY +  WAI R+ +  +SV E
Sbjct: 171 HKINTGWVKWKNVTGGLCDNKMPIKLKGKFYRTAIRPSMLYGSECWAIKRQQIYKMSVAE 230

Query: 619 L 621
           +
Sbjct: 231 M 231



 Score = 23.9 bits (50), Expect(3) = 3e-19
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +3

Query: 387 RYLGSIIH*EGEIKE 431
           RYLGSI+  EG+I E
Sbjct: 153 RYLGSIVQCEGDIDE 167


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score = 68.9 bits (167), Expect(3) = 5e-19
 Identities = 44/101 (43%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
 Frame = +2

Query: 110 LKPYLFALVIDELT--IQKDIPW*ALFTDDIALIDGTKLGANAKLEVW**TLESRRFKLS 283
           L PYLF LV+D LT  IQ+  P   LF DD+ L+  ++   N +LE W   LE+  F+LS
Sbjct: 349 LTPYLFTLVLDVLTEHIQELAPRCMLFADDVVLVGESREEVNGRLETWRQALEAYGFRLS 408

Query: 284 RIKSKYIK*NFS*SRNESGEEVKIKNQEISKNFR*VFRFNY 406
           R K+KY++ NFS  R+ S  EVK+ +  I +    V RF Y
Sbjct: 409 RSKTKYMECNFSGRRSRSTLEVKVGDHIIPQ----VTRFKY 445



 Score = 45.8 bits (107), Expect(3) = 5e-19
 Identities = 21/54 (38%), Positives = 30/54 (55%)
 Frame = +1

Query: 442 HRIKES*AKWGNDSGILYN*PILLKAKGKFYKNAIRATMLYKTIFWAIRKHVNN 603
           HRI+    KW   S +L +  + LK  GKFY+ A+R  +LY T  WA++    N
Sbjct: 462 HRIQAGWLKWRRASSVLCDKKVPLKLTGKFYRTAVRPALLYGTECWAVKSQHEN 515



 Score = 28.9 bits (63), Expect(3) = 5e-19
 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 25/63 (39%)
 Frame = +3

Query: 3   EKAYDRVSRDLIW-------------------------LVKTTI*KTS*FSVSLVVHQGS 107
           EK YDRV R+++W                          VKT    T  F +++ +HQGS
Sbjct: 288 EKGYDRVPREILWKALEKKRVRIAYIRAIKDMYERASTSVKTQDGTTEDFPITIGLHQGS 347

Query: 108 TLS 116
           TL+
Sbjct: 348 TLT 350


>gb|AAT40504.2| Polyprotein, putative [Solanum demissum]
          Length = 868

 Score = 87.0 bits (214), Expect(2) = 2e-18
 Identities = 62/158 (39%), Positives = 89/158 (56%), Gaps = 6/158 (3%)
 Frame = +2

Query: 110 LKPYLFALVIDELT--IQKDIPW*ALFTDDIALIDGTKLGANAKLEVW**TLESRRFKLS 283
           L P+LFALV+DELT  IQ+ +PW  LF DDI LID T+   NA+LEVW  TLES+ F+LS
Sbjct: 411 LSPFLFALVMDELTRSIQETVPWCMLFADDIVLIDETRDRVNARLEVWRQTLESKGFRLS 470

Query: 284 RIKSKYIK*NFS*SRNESGEEVKIKNQEISKNFR*VFRFNYSLGRRNKRDDASIEL---- 451
           R K++Y+   FS   +E+  EV++  Q I K     +      G  +  DD +  +    
Sbjct: 471 RTKTEYLGCKFSDGLDETDVEVRLAAQVIPKKESFRYLGAVIQGSGDIDDDVTHRVGAAW 530

Query: 452 KKVRLSGGMILEYYIIDLSY*RRKGNFIRMPLGRPCFI 565
            K RL+ G++ +  I      + KG F R+ + RP  +
Sbjct: 531 MKWRLASGVLCDKKISP----KLKGKFYRVVV-RPALL 563



 Score = 34.7 bits (78), Expect(2) = 2e-18
 Identities = 21/64 (32%), Positives = 34/64 (53%)
 Frame = +3

Query: 648 MKMLRCISGKSKSPKDKIRKVHISKG*K*LQFEIK*EKNGLRWFGHIQQRPLNMSIRKIN 827
           M+MLR + G ++S  DKIR   I +         K  +  LRWFGH+++R  +  +R+  
Sbjct: 584 MRMLRWMCGHTRS--DKIRNEVIREKVGVASVVDKLREARLRWFGHVKRRSADAPVRRCE 641

Query: 828 ALTV 839
            + V
Sbjct: 642 VMVV 645


>ref|XP_003571941.1| PREDICTED: RNA-directed DNA polymerase from mobile element
           jockey-like [Brachypodium distachyon]
          Length = 307

 Score = 82.4 bits (202), Expect(2) = 8e-17
 Identities = 58/161 (36%), Positives = 90/161 (55%), Gaps = 9/161 (5%)
 Frame = +2

Query: 110 LKPYLFALVIDELT--IQKDIPW*ALFTDDIALIDGTKLGANAKLEVW**TLESRRFKLS 283
           L P LF LV+DE+T  IQ DIPW  LF DD+ L+D ++ G N KLE+W  TLES+ F+LS
Sbjct: 25  LSPCLFDLVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKLELWRQTLESKGFRLS 84

Query: 284 RIKSKYIK*NFS*SR-NESGEEVKIKNQEISKNFR*VFRFNYSLGRRNKRDDASIELK-- 454
           R K++Y+K  FS +   E  EEV +  Q + +  +  FR+  S+ +++   D  +  +  
Sbjct: 85  RTKTEYMKCGFSTTTPEEEEEEVSLDGQVVPQ--KDTFRYLGSMLQKDGDIDEDVNHRIK 142

Query: 455 ----KVRLSGGMILEYYIIDLSY*RRKGNFIRMPLGRPCFI 565
               K R + G++ +  +      + KG F R  + RP  +
Sbjct: 143 AGWMKWRQASGILCDKRVPQ----KLKGKFYRTAI-RPAIL 178



 Score = 33.9 bits (76), Expect(2) = 8e-17
 Identities = 20/56 (35%), Positives = 31/56 (55%)
 Frame = +3

Query: 648 MKMLRCISGKSKSPKDKIRKVHISKG*K*LQFEIK*EKNGLRWFGHIQQRPLNMSI 815
           M+MLR + G ++  +D +R   I           K  ++ LRWFGHIQ+RPL+  +
Sbjct: 199 MRMLRWMCGHTR--RDHVRNDDIRDRVGVAPIAEKLVQHRLRWFGHIQRRPLDAPV 252


>gb|EMS52533.1| ATP-citrate synthase [Triticum urartu]
          Length = 589

 Score = 86.7 bits (213), Expect(2) = 8e-16
 Identities = 47/89 (52%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
 Frame = +2

Query: 110 LKPYLFALVIDELT--IQKDIPW*ALFTDDIALIDGTKLGANAKLEVW**TLESRRFKLS 283
           L PYLFALV+DE+T  IQ DIPW  LF DD+ L+D ++ G N KLE+W  TLES+ F+LS
Sbjct: 478 LSPYLFALVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKLELWRQTLESKGFRLS 537

Query: 284 RIKSKYIK*NFS*SRNESGEEVKIKNQEI 370
           R K++Y+   FS +R E  EEV +  Q +
Sbjct: 538 RTKTEYMMCGFSTTRCE--EEVSLDGQVV 564



 Score = 26.2 bits (56), Expect(2) = 8e-16
 Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 25/63 (39%)
 Frame = +3

Query: 3   EKAYDRVSRDLIW-------------------------LVKTTI*KTS*FSVSLVVHQGS 107
           EKAYD++ R+++W                          V+T+   T  F + + +HQGS
Sbjct: 417 EKAYDKIPRNVMWWALEKHKVPAKYITLIKDMYDNVVTSVRTSNVDTDDFPIKIGLHQGS 476

Query: 108 TLS 116
            LS
Sbjct: 477 ALS 479


>gb|EMT16429.1| hypothetical protein F775_01472 [Aegilops tauschii]
          Length = 571

 Score = 90.5 bits (223), Expect = 3e-15
 Identities = 64/164 (39%), Positives = 92/164 (56%), Gaps = 8/164 (4%)
 Frame = +2

Query: 110 LKPYLFALVIDELT--IQKDIPW*ALFTDDIALIDGTKLGANAKLEVW**TLESRRFKLS 283
           L PYLFALV+DE+T  IQ DIPW  LF DD+ L+D ++ GAN KLE+W  TLES+ F+LS
Sbjct: 250 LSPYLFALVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGANRKLELWRQTLESKGFRLS 309

Query: 284 RIKSKYIK*NFS*SRNESGEEVKIKNQEISKNFR*VFRFNYSLGRRNKRDDASIELK--- 454
           R K++Y+   FS +R E  EEV +  Q + K  +  FR+  S+ + +   D  +  +   
Sbjct: 310 RTKTEYMMCGFSTTRCEE-EEVSLDGQVVPK--KDTFRYLGSMLQEDGGIDEDVNHRVKA 366

Query: 455 ---KVRLSGGMILEYYIIDLSY*RRKGNFIRMPLGRPCFIKQYF 577
              K R + G++ +  +      + KG F R    R C    YF
Sbjct: 367 GWMKWRQASGILCDKRVRQ----KLKGKFYRT---RICIKYPYF 403


>emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene]
          Length = 990

 Score = 48.1 bits (113), Expect(4) = 6e-15
 Identities = 26/67 (38%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
 Frame = +2

Query: 110 LKPYLFALVIDELT--IQKDIPW*ALFTDDIALIDGTKLGANAKLEVW**TLESRRFKLS 283
           L P+LF +V+D ++  IQ   PW  ++ DDIALI   +L    K+ +W  TLE+   KL+
Sbjct: 710 LSPFLFNVVLDTVSAHIQDQPPWLMMYADDIALIAENRLTLERKVNLWKGTLENGGLKLN 769

Query: 284 RIKSKYI 304
             K++Y+
Sbjct: 770 VSKTEYM 776



 Score = 40.8 bits (94), Expect(4) = 6e-15
 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
 Frame = +1

Query: 445 RIKES*AKWGNDSGILYN*PILLKAKGKFYKNAIRATMLYKTIFW-AIRKHVNNLSVTEL 621
           RI  + AKW   +G++ +  I  K KG  YK+ +R  +LY +  W A+ +H   L VTE+
Sbjct: 819 RISAAWAKWREVTGVVCDRRIPPKLKGLIYKSIVRPVLLYGSECWPALSRHTQELHVTEM 878



 Score = 38.9 bits (89), Expect(4) = 6e-15
 Identities = 25/64 (39%), Positives = 34/64 (53%)
 Frame = +3

Query: 648  MKMLRCISGKSKSPKDKIRKVHISKG*K*LQFEIK*EKNGLRWFGHIQQRPLNMSIRKIN 827
            MKMLR + G ++S  D+IR   I           K ++  LRWFGH+ +RP N   RK  
Sbjct: 878  MKMLRWMCGVTRS--DRIRNTFIRGSLGVRDVADKLQERRLRWFGHVTRRPKNYVGRKCL 935

Query: 828  ALTV 839
            A+ V
Sbjct: 936  AILV 939



 Score = 20.8 bits (42), Expect(4) = 6e-15
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 387 RYLGSIIH*EGEI 425
           RYLGS++H  G I
Sbjct: 800 RYLGSVMHESGGI 812


>gb|EHJ65195.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 1253

 Score = 50.8 bits (120), Expect(4) = 1e-14
 Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
 Frame = +2

Query: 110  LKPYLFALVIDELT--IQKDIPW*ALFTDDIALIDGTKLGANAKLEVW**TLESRRFKLS 283
            L P+LF +V+D ++  IQ   PW  ++ DDIALID ++L    ++ +W  TLE+   KL+
Sbjct: 977  LSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRVNLWKGTLENGGLKLN 1036

Query: 284  RIKSKYI 304
              K++Y+
Sbjct: 1037 VTKTEYM 1043



 Score = 41.6 bits (96), Expect(4) = 1e-14
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
 Frame = +1

Query: 439  QHRIKES*AKWGNDSGILYN*PILLKAKGKFYKNAIRATMLYKTIFW-AIRKHVNNLSVT 615
            Q RI  + AKW + +G++ +  I  K KG  YK+ IR  +LY +  W  + +H   L VT
Sbjct: 1084 QARISAAWAKWRDVTGVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTLSRHTQELHVT 1143

Query: 616  EL 621
            E+
Sbjct: 1144 EM 1145



 Score = 33.5 bits (75), Expect(4) = 1e-14
 Identities = 19/53 (35%), Positives = 30/53 (56%)
 Frame = +3

Query: 648  MKMLRCISGKSKSPKDKIRKVHISKG*K*LQFEIK*EKNGLRWFGHIQQRPLN 806
            MKMLR + G +++  D+IR   I           K +++ LRW+GH+ +RP N
Sbjct: 1145 MKMLRWMCGVTRA--DRIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRPEN 1195



 Score = 21.6 bits (44), Expect(4) = 1e-14
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 387  RYLGSIIH*EGEI 425
            RYLGSI+H  G I
Sbjct: 1067 RYLGSILHESGGI 1079


>gb|EHJ71530.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 601

 Score = 50.8 bits (120), Expect(4) = 1e-14
 Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
 Frame = +2

Query: 110 LKPYLFALVIDELT--IQKDIPW*ALFTDDIALIDGTKLGANAKLEVW**TLESRRFKLS 283
           L P+LF +V+D ++  IQ   PW  ++ DDIALID ++L    ++ +W  TLE+   KL+
Sbjct: 156 LSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRVNLWKGTLENGGLKLN 215

Query: 284 RIKSKYI 304
             K++Y+
Sbjct: 216 VTKTEYM 222



 Score = 41.6 bits (96), Expect(4) = 1e-14
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
 Frame = +1

Query: 439 QHRIKES*AKWGNDSGILYN*PILLKAKGKFYKNAIRATMLYKTIFW-AIRKHVNNLSVT 615
           Q RI  + AKW + +G++ +  I  K KG  YK+ IR  +LY +  W  + +H   L VT
Sbjct: 263 QARISAAWAKWRDVTGVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTLSRHTQELHVT 322

Query: 616 EL 621
           E+
Sbjct: 323 EM 324



 Score = 33.5 bits (75), Expect(4) = 1e-14
 Identities = 19/53 (35%), Positives = 30/53 (56%)
 Frame = +3

Query: 648 MKMLRCISGKSKSPKDKIRKVHISKG*K*LQFEIK*EKNGLRWFGHIQQRPLN 806
           MKMLR + G +++  D+IR   I           K +++ LRW+GH+ +RP N
Sbjct: 324 MKMLRWMCGVTRA--DRIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRPEN 374



 Score = 21.6 bits (44), Expect(4) = 1e-14
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 387 RYLGSIIH*EGEI 425
           RYLGSI+H  G I
Sbjct: 246 RYLGSILHESGGI 258


>gb|EHJ75084.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 472

 Score = 50.8 bits (120), Expect(4) = 1e-14
 Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
 Frame = +2

Query: 110 LKPYLFALVIDELT--IQKDIPW*ALFTDDIALIDGTKLGANAKLEVW**TLESRRFKLS 283
           L P+LF +V+D ++  IQ   PW  ++ DDIALID ++L    ++ +W  TLE+   KL+
Sbjct: 196 LSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRVNLWKGTLENGGLKLN 255

Query: 284 RIKSKYI 304
             K++Y+
Sbjct: 256 VTKTEYM 262



 Score = 41.6 bits (96), Expect(4) = 1e-14
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
 Frame = +1

Query: 439 QHRIKES*AKWGNDSGILYN*PILLKAKGKFYKNAIRATMLYKTIFW-AIRKHVNNLSVT 615
           Q RI  + AKW + +G++ +  I  K KG  YK+ IR  +LY +  W  + +H   L VT
Sbjct: 303 QARISAAWAKWRDVTGVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTLSRHTQELHVT 362

Query: 616 EL 621
           E+
Sbjct: 363 EM 364



 Score = 33.5 bits (75), Expect(4) = 1e-14
 Identities = 19/53 (35%), Positives = 30/53 (56%)
 Frame = +3

Query: 648 MKMLRCISGKSKSPKDKIRKVHISKG*K*LQFEIK*EKNGLRWFGHIQQRPLN 806
           MKMLR + G +++  D+IR   I           K +++ LRW+GH+ +RP N
Sbjct: 364 MKMLRWMCGVTRA--DRIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRPEN 414



 Score = 21.6 bits (44), Expect(4) = 1e-14
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 387 RYLGSIIH*EGEI 425
           RYLGSI+H  G I
Sbjct: 286 RYLGSILHESGGI 298


>gb|EHJ64905.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 985

 Score = 50.8 bits (120), Expect(4) = 2e-14
 Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
 Frame = +2

Query: 110 LKPYLFALVIDELT--IQKDIPW*ALFTDDIALIDGTKLGANAKLEVW**TLESRRFKLS 283
           L P+LF +V+D ++  IQ   PW  ++ DDIALID ++L    ++ +W  TLE+   KL+
Sbjct: 709 LSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRVNLWKGTLENGGLKLN 768

Query: 284 RIKSKYI 304
             K++Y+
Sbjct: 769 VTKTEYM 775



 Score = 41.2 bits (95), Expect(4) = 2e-14
 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = +1

Query: 439  QHRIKES*AKWGNDSGILYN*PILLKAKGKFYKNAIRATMLYKTIFW-AIRKHVNNLSVT 615
            Q RI  + AKW   +G++ +  I  K KG  YK+ IR  +LY +  W  + +H   L VT
Sbjct: 816  QARISAAWAKWREVTGVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTLSRHTQELHVT 875

Query: 616  EL 621
            E+
Sbjct: 876  EM 877



 Score = 33.5 bits (75), Expect(4) = 2e-14
 Identities = 19/53 (35%), Positives = 30/53 (56%)
 Frame = +3

Query: 648  MKMLRCISGKSKSPKDKIRKVHISKG*K*LQFEIK*EKNGLRWFGHIQQRPLN 806
            MKMLR + G +++  D+IR   I           K +++ LRW+GH+ +RP N
Sbjct: 877  MKMLRWMCGVTRA--DRIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRPEN 927



 Score = 21.6 bits (44), Expect(4) = 2e-14
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 387 RYLGSIIH*EGEI 425
           RYLGSI+H  G I
Sbjct: 799 RYLGSILHESGGI 811


>gb|EHJ71992.1| endonuclease-reverse transcriptase HmRTE-e01 [Danaus plexippus]
          Length = 586

 Score = 50.8 bits (120), Expect(4) = 2e-14
 Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
 Frame = +2

Query: 110 LKPYLFALVIDELT--IQKDIPW*ALFTDDIALIDGTKLGANAKLEVW**TLESRRFKLS 283
           L P+LF +V+D ++  IQ   PW  ++ DDIALID ++L    ++ +W  TLE+   KL+
Sbjct: 24  LSPFLFNVVLDTVSANIQDQPPWLMMYADDIALIDESRLTLERRVNLWKGTLENGGLKLN 83

Query: 284 RIKSKYI 304
             K++Y+
Sbjct: 84  VTKTEYM 90



 Score = 41.2 bits (95), Expect(4) = 2e-14
 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = +1

Query: 439 QHRIKES*AKWGNDSGILYN*PILLKAKGKFYKNAIRATMLYKTIFW-AIRKHVNNLSVT 615
           Q RI  + AKW   +G++ +  I  K KG  YK+ IR  +LY +  W  + +H   L VT
Sbjct: 131 QARISAAWAKWREVTGVVCDRRIPTKLKGIIYKSIIRPVLLYGSECWPTLSRHTQELHVT 190

Query: 616 EL 621
           E+
Sbjct: 191 EM 192



 Score = 33.5 bits (75), Expect(4) = 2e-14
 Identities = 19/53 (35%), Positives = 30/53 (56%)
 Frame = +3

Query: 648 MKMLRCISGKSKSPKDKIRKVHISKG*K*LQFEIK*EKNGLRWFGHIQQRPLN 806
           MKMLR + G +++  D+IR   I           K +++ LRW+GH+ +RP N
Sbjct: 192 MKMLRWMCGVTRA--DRIRNTFIRGSLGVRDVADKLQESRLRWYGHVARRPEN 242



 Score = 21.6 bits (44), Expect(4) = 2e-14
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +3

Query: 387 RYLGSIIH*EGEI 425
           RYLGSI+H  G I
Sbjct: 114 RYLGSILHESGGI 126