BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00010694
         (1612 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007034976.1| CRM family member 3A isoform 3 [Theobroma ca...   702   0.0  
ref|XP_007034974.1| CRM family member 3A isoform 1 [Theobroma ca...   702   0.0  
ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp...   694   0.0  
emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]   694   0.0  
ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron sp...   684   0.0  
ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prun...   684   0.0  
ref|XP_006420115.1| hypothetical protein CICLE_v10004262mg [Citr...   679   0.0  
ref|XP_006420114.1| hypothetical protein CICLE_v10004262mg [Citr...   679   0.0  
ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron sp...   679   0.0  
gb|EXB29861.1| Chloroplastic group IIA intron splicing facilitat...   677   0.0  
ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron sp...   673   0.0  
ref|XP_004495335.1| PREDICTED: chloroplastic group IIA intron sp...   672   0.0  
ref|XP_002517017.1| conserved hypothetical protein [Ricinus comm...   671   0.0  
ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Popu...   667   0.0  
ref|XP_003590782.1| Chloroplastic group IIA intron splicing faci...   665   0.0  
ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron sp...   659   0.0  
ref|XP_007144072.1| hypothetical protein PHAVU_007G126200g [Phas...   657   0.0  
ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron sp...   653   0.0  
ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron sp...   652   0.0  
ref|XP_007034975.1| CRM family member 3A isoform 2 [Theobroma ca...   646   0.0  

>ref|XP_007034976.1| CRM family member 3A isoform 3 [Theobroma cacao]
            gi|508714005|gb|EOY05902.1| CRM family member 3A isoform
            3 [Theobroma cacao]
          Length = 856

 Score =  702 bits (1813), Expect = 0.0
 Identities = 358/538 (66%), Positives = 418/538 (77%), Gaps = 1/538 (0%)
 Frame = -1

Query: 1612 VEDIFYVEEGILPNSRGGFSRESPLGIGGSGAFGYNGEVRFPWEKPLVKEDEGRRSIRPQ 1433
            +EDIFYVEEG+LPN+RGGFS+ESPLG+     FG +GEVRFPWEK    E+EG  + R  
Sbjct: 170  IEDIFYVEEGMLPNNRGGFSKESPLGM--ENVFGSDGEVRFPWEKRKEDEEEGGWTARRD 227

Query: 1432 SRTSLAELTLPESELRRLRHLAVSTKHKTKIGGGGVTKAIVDLIHEKWKTAEIVRLKCEG 1253
            S+TSLAELTLPESELRRLR+L   TK K +I G GVT+ +VD IHEKWKT EIVRLK EG
Sbjct: 228  SKTSLAELTLPESELRRLRNLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEEIVRLKIEG 287

Query: 1252 PPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYELPSMKQEKKRAQKTNDTTYTI- 1076
             PALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYE+PS+   K+  ++    TY + 
Sbjct: 288  APALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYEVPSVHLSKRIYKRNETFTYALP 347

Query: 1075 STDDNNKDRMEQNCVYDTKLAEGHSLATVKGTEEADQLPEVAYEREIDELLDGLGPRYTD 896
            S  D  KD        D    + +S    +G ++ + LPE+ YE E+D+LL+GLGPRYTD
Sbjct: 348  SVSDKTKDLSSLGSHKDVVSPQANSETAAEGNKDTESLPEIRYEDEVDKLLEGLGPRYTD 407

Query: 895  WXXXXXXXXXXXXXXXXXPGYRPPFRVLPYGVRGSLGIKEATALRRLARVLPPHFAIGRS 716
            W                  GY+PPFRVLPYGVR SLG+KEAT+LRRLARVLPPHFAIGRS
Sbjct: 408  WPGCNPLPVDADLLPGIVAGYQPPFRVLPYGVRSSLGLKEATSLRRLARVLPPHFAIGRS 467

Query: 715  RQHQGLAMAMVKLWERSSIAKIAMKRGVQLTTSERMAEDIKKMTGGTLLSRNKDFIVFYR 536
            RQ QGLA+AM+KLWE+SSIAKIA+KRGVQLTTSERMAEDIKK+TGG LLSRNKDF+VFYR
Sbjct: 468  RQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYR 527

Query: 535  GKDFLSRDVTXXXXXXXXXXXXLQDEEEHARLRASSFVVPSAYTTEESGTAGTLNETLEA 356
            GK+FLS DV             LQDEEE ARLRAS+F+VPS    E+SG AGTL ETL+A
Sbjct: 528  GKNFLSADVAEALVERERLAKSLQDEEEQARLRASAFLVPSTEVAEQSGAAGTLGETLDA 587

Query: 355  DSRWGKRLDDNHKDEVMRAAEVARHGILVRKLERKLTVAERKLMKAERALAKVETFLKPL 176
            D+RWGKRLD++HK++VM+ AE+ RH  LVRKL++ L  A+RKL+KAERAL KVE +LKP 
Sbjct: 588  DARWGKRLDNHHKEKVMKEAEILRHANLVRKLDKNLAFADRKLLKAERALTKVEDYLKPA 647

Query: 175  EQPKDSGSITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIVK 2
            ++  D  SITDEERFMFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRELVK+I+K
Sbjct: 648  DRQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIMK 705


>ref|XP_007034974.1| CRM family member 3A isoform 1 [Theobroma cacao]
            gi|508714003|gb|EOY05900.1| CRM family member 3A isoform
            1 [Theobroma cacao]
          Length = 876

 Score =  702 bits (1813), Expect = 0.0
 Identities = 358/538 (66%), Positives = 418/538 (77%), Gaps = 1/538 (0%)
 Frame = -1

Query: 1612 VEDIFYVEEGILPNSRGGFSRESPLGIGGSGAFGYNGEVRFPWEKPLVKEDEGRRSIRPQ 1433
            +EDIFYVEEG+LPN+RGGFS+ESPLG+     FG +GEVRFPWEK    E+EG  + R  
Sbjct: 170  IEDIFYVEEGMLPNNRGGFSKESPLGM--ENVFGSDGEVRFPWEKRKEDEEEGGWTARRD 227

Query: 1432 SRTSLAELTLPESELRRLRHLAVSTKHKTKIGGGGVTKAIVDLIHEKWKTAEIVRLKCEG 1253
            S+TSLAELTLPESELRRLR+L   TK K +I G GVT+ +VD IHEKWKT EIVRLK EG
Sbjct: 228  SKTSLAELTLPESELRRLRNLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEEIVRLKIEG 287

Query: 1252 PPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYELPSMKQEKKRAQKTNDTTYTI- 1076
             PALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYE+PS+   K+  ++    TY + 
Sbjct: 288  APALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYEVPSVHLSKRIYKRNETFTYALP 347

Query: 1075 STDDNNKDRMEQNCVYDTKLAEGHSLATVKGTEEADQLPEVAYEREIDELLDGLGPRYTD 896
            S  D  KD        D    + +S    +G ++ + LPE+ YE E+D+LL+GLGPRYTD
Sbjct: 348  SVSDKTKDLSSLGSHKDVVSPQANSETAAEGNKDTESLPEIRYEDEVDKLLEGLGPRYTD 407

Query: 895  WXXXXXXXXXXXXXXXXXPGYRPPFRVLPYGVRGSLGIKEATALRRLARVLPPHFAIGRS 716
            W                  GY+PPFRVLPYGVR SLG+KEAT+LRRLARVLPPHFAIGRS
Sbjct: 408  WPGCNPLPVDADLLPGIVAGYQPPFRVLPYGVRSSLGLKEATSLRRLARVLPPHFAIGRS 467

Query: 715  RQHQGLAMAMVKLWERSSIAKIAMKRGVQLTTSERMAEDIKKMTGGTLLSRNKDFIVFYR 536
            RQ QGLA+AM+KLWE+SSIAKIA+KRGVQLTTSERMAEDIKK+TGG LLSRNKDF+VFYR
Sbjct: 468  RQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYR 527

Query: 535  GKDFLSRDVTXXXXXXXXXXXXLQDEEEHARLRASSFVVPSAYTTEESGTAGTLNETLEA 356
            GK+FLS DV             LQDEEE ARLRAS+F+VPS    E+SG AGTL ETL+A
Sbjct: 528  GKNFLSADVAEALVERERLAKSLQDEEEQARLRASAFLVPSTEVAEQSGAAGTLGETLDA 587

Query: 355  DSRWGKRLDDNHKDEVMRAAEVARHGILVRKLERKLTVAERKLMKAERALAKVETFLKPL 176
            D+RWGKRLD++HK++VM+ AE+ RH  LVRKL++ L  A+RKL+KAERAL KVE +LKP 
Sbjct: 588  DARWGKRLDNHHKEKVMKEAEILRHANLVRKLDKNLAFADRKLLKAERALTKVEDYLKPA 647

Query: 175  EQPKDSGSITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIVK 2
            ++  D  SITDEERFMFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRELVK+I+K
Sbjct: 648  DRQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIMK 705


>ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic [Vitis vinifera]
            gi|297737163|emb|CBI26364.3| unnamed protein product
            [Vitis vinifera]
          Length = 902

 Score =  694 bits (1791), Expect = 0.0
 Identities = 369/546 (67%), Positives = 424/546 (77%), Gaps = 9/546 (1%)
 Frame = -1

Query: 1612 VEDIFYVEEGILPNSRGGFSRESPLGIGGSGAFGYNGEVRFPWEKPLVKEDEGRRSIRPQ 1433
            +EDIFY+EEGILPN +GGFS +SPLG+   G    NGEVRFPWE+P V+E     S+R +
Sbjct: 157  IEDIFYIEEGILPNPQGGFSLDSPLGVENKG--DGNGEVRFPWERPKVEEG----SVRIK 210

Query: 1432 SRTSLAELTLPESELRRLRHLAVSTKHKTKIGGGGVTKAIVDLIHEKWKTAEIVRLKCEG 1253
            SRTSLAELTLPESELRRLR+L + TK+KTKIGGGGVT+A+VD+I EKWKT+EIV+LKCEG
Sbjct: 211  SRTSLAELTLPESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEG 270

Query: 1252 PPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYELPSMKQEKKRAQKTNDTTYT-I 1076
              ALNM+R+HEILERKTGGLVIWRSGTSVSLYRGVSYE+P   Q  KR  K N+T+++  
Sbjct: 271  AAALNMRRIHEILERKTGGLVIWRSGTSVSLYRGVSYEVPV--QLNKRVYKKNETSHSSF 328

Query: 1075 STDDNNKDRMEQNCVYDTKLAEGH------SLATVKGT--EEADQLPEVAYEREIDELLD 920
            S+   N   +  N       A G       S AT+  T  E  D   EV YE EID+LLD
Sbjct: 329  SSITPNSFAISSNKTSGNAPAVGSNQNVHASQATLNITDGENKDTESEVKYEDEIDKLLD 388

Query: 919  GLGPRYTDWXXXXXXXXXXXXXXXXXPGYRPPFRVLPYGVRGSLGIKEATALRRLARVLP 740
            GLGPRYTDW                  GY+PPFR+LPYGVR SLG+KEATALRRLARVLP
Sbjct: 389  GLGPRYTDWPGCDPLPIDADLLPGKIHGYQPPFRILPYGVRSSLGLKEATALRRLARVLP 448

Query: 739  PHFAIGRSRQHQGLAMAMVKLWERSSIAKIAMKRGVQLTTSERMAEDIKKMTGGTLLSRN 560
            PHFA+GRSRQ +GLAMAM+KLWERSSIAK+A+KRGVQLTTSERMAEDIKK+TGG LLSRN
Sbjct: 449  PHFALGRSRQLEGLAMAMIKLWERSSIAKVALKRGVQLTTSERMAEDIKKLTGGVLLSRN 508

Query: 559  KDFIVFYRGKDFLSRDVTXXXXXXXXXXXXLQDEEEHARLRASSFVVPSAYTTEESGTAG 380
            KDF+VFYRGK+FLS DVT            LQDEEE ARLRAS+ + P+   TE+ G+AG
Sbjct: 509  KDFLVFYRGKNFLSSDVTEALLERERLAKALQDEEEQARLRASTLITPTVGITEQVGSAG 568

Query: 379  TLNETLEADSRWGKRLDDNHKDEVMRAAEVARHGILVRKLERKLTVAERKLMKAERALAK 200
            TL ETLEAD+RWGKRLDD+ K ++++ AEVARH  LVRKLER+L +AERKLMKAE AL+K
Sbjct: 569  TLGETLEADARWGKRLDDHDKQKMLKKAEVARHANLVRKLERRLALAERKLMKAENALSK 628

Query: 199  VETFLKPLEQPKDSGSITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYREL 20
            VE FLKP  +P D  SITDEERFMFRKLGLRMKAFLLLGRRGVF GTVENMHLHWKYREL
Sbjct: 629  VEEFLKPANRPADPESITDEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMHLHWKYREL 688

Query: 19   VKVIVK 2
            VK+IVK
Sbjct: 689  VKIIVK 694


>emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
          Length = 902

 Score =  694 bits (1790), Expect = 0.0
 Identities = 370/546 (67%), Positives = 425/546 (77%), Gaps = 9/546 (1%)
 Frame = -1

Query: 1612 VEDIFYVEEGILPNSRGGFSRESPLGIGGSGAFGYNGEVRFPWEKPLVKEDEGRRSIRPQ 1433
            +EDIFY+EEGILPN +GGFS +SPLG+   G    NGEVRFPWE+P V+E     S+R +
Sbjct: 157  IEDIFYIEEGILPNPQGGFSLDSPLGVENKG--DGNGEVRFPWERPKVEEG----SVRIK 210

Query: 1432 SRTSLAELTLPESELRRLRHLAVSTKHKTKIGGGGVTKAIVDLIHEKWKTAEIVRLKCEG 1253
            SRTSLAELTLPESELRRLR+L + TK+KTKIGGGGVT+A+VD+I EKWKT+EIV+LKCEG
Sbjct: 211  SRTSLAELTLPESELRRLRNLTMRTKNKTKIGGGGVTQAVVDMIREKWKTSEIVKLKCEG 270

Query: 1252 PPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYELPSMKQEKKRAQKTNDTTYT-I 1076
              ALNM+R+HEILERKTGGLVIWRSGTSVSLYRGVSYE+P   Q  KR  K N+T+++  
Sbjct: 271  AAALNMRRIHEILERKTGGLVIWRSGTSVSLYRGVSYEVPV--QLNKRVYKKNETSHSSF 328

Query: 1075 STDDNNKDRMEQNCVYDTKLAEGH------SLATVKGT--EEADQLPEVAYEREIDELLD 920
            S+   N   +  N       A G       S AT+  T  E  D   EV YE EID+LLD
Sbjct: 329  SSITPNSFAISSNKTSGNAPAVGSNQNVHASQATLXITDGENKDTESEVKYEDEIDKLLD 388

Query: 919  GLGPRYTDWXXXXXXXXXXXXXXXXXPGYRPPFRVLPYGVRGSLGIKEATALRRLARVLP 740
            GLGPRYTDW                  GY+PPFR+LPYGVR SLG+KEATALRRLARVLP
Sbjct: 389  GLGPRYTDWPXCDPLPIDADLLPGKIHGYQPPFRILPYGVRSSLGLKEATALRRLARVLP 448

Query: 739  PHFAIGRSRQHQGLAMAMVKLWERSSIAKIAMKRGVQLTTSERMAEDIKKMTGGTLLSRN 560
            PHFA+GRSRQ +GLAMAM+KLWERSSIAK+A+KRGVQLTTSERMAEDIKK+TGG LLSRN
Sbjct: 449  PHFALGRSRQLEGLAMAMIKLWERSSIAKVALKRGVQLTTSERMAEDIKKLTGGVLLSRN 508

Query: 559  KDFIVFYRGKDFLSRDVTXXXXXXXXXXXXLQDEEEHARLRASSFVVPSAYTTEESGTAG 380
            KDF+VFYRGK+FLS DVT            LQDEEE ARLRAS+ + P+   TE+ G+AG
Sbjct: 509  KDFLVFYRGKNFLSSDVTEALLERERLAKALQDEEEQARLRASTLITPTVGITEQVGSAG 568

Query: 379  TLNETLEADSRWGKRLDDNHKDEVMRAAEVARHGILVRKLERKLTVAERKLMKAERALAK 200
            TL ETLEAD+RWGKRLDD+ K ++++ AEVARH  LVRKLER+L +AERKLMKAE AL+K
Sbjct: 569  TLGETLEADARWGKRLDDHDKQKMLKKAEVARHANLVRKLERRLALAERKLMKAENALSK 628

Query: 199  VETFLKPLEQPKDSGSITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYREL 20
            VE FLKP  +P D  SITDEERFMFRKLGLRMKAFLLLGRRGVF GTVENMHLHWKYREL
Sbjct: 629  VEEFLKPANRPADPESITDEERFMFRKLGLRMKAFLLLGRRGVFSGTVENMHLHWKYREL 688

Query: 19   VKVIVK 2
            VK+IVK
Sbjct: 689  VKIIVK 694


>ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Citrus sinensis]
          Length = 933

 Score =  684 bits (1766), Expect = 0.0
 Identities = 364/558 (65%), Positives = 424/558 (75%), Gaps = 21/558 (3%)
 Frame = -1

Query: 1612 VEDIFYVEEGILPNSRGGFSRESPLGIGGSGAFGYNGEVRFPWEKPLVKEDEGRRSIRPQ 1433
            +EDIFYVEEG+LPN+RGGFS+ESPLG+G     G +GEV+FPWEK   +  EGR  ++  
Sbjct: 184  IEDIFYVEEGLLPNARGGFSKESPLGLGEE--VGSDGEVKFPWEKRKEEVAEGRWLVKRS 241

Query: 1432 SRTSLAELTLPESELRRLRHLAVSTKHKTKIGGGGVTKAIVDLIHEKWKTAEIVRLKCEG 1253
            SRTSLAELTLPESELRRLR+L   TK KT+I G G+T+A+VD+IHEKWKT+EIVRLK EG
Sbjct: 242  SRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEG 301

Query: 1252 PPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYELPSMKQEKKRAQKTNDTTYTIS 1073
             PALNMKRMHEILERKTGGLVIWRSGT+VSLYRGVSYE+PS+ Q  KR  K N+   +  
Sbjct: 302  APALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSV-QLNKRIYKRNELPASSV 360

Query: 1072 TDDNNKDRMEQNCV---------------------YDTKLAEGHSLATVKGTEEADQLPE 956
            +   +K   +Q  +                     Y+   A   +L T    +E D + E
Sbjct: 361  SQATDKQIHKQISMSGNSLSAAADKTAQDPSNFDSYNNVHATQVNLETASEEQETDFVRE 420

Query: 955  VAYEREIDELLDGLGPRYTDWXXXXXXXXXXXXXXXXXPGYRPPFRVLPYGVRGSLGIKE 776
            V YE E+++LLDGLGPRYTDW                 PGY+PPFRVLPYGVR +L  KE
Sbjct: 421  VKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARKE 480

Query: 775  ATALRRLARVLPPHFAIGRSRQHQGLAMAMVKLWERSSIAKIAMKRGVQLTTSERMAEDI 596
            AT L+RLARVLPPHFA+GRSRQ QGLA+AM+KLWE+SSIAKIA+KRGVQLTTSERM EDI
Sbjct: 481  ATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVEDI 540

Query: 595  KKMTGGTLLSRNKDFIVFYRGKDFLSRDVTXXXXXXXXXXXXLQDEEEHARLRASSFVVP 416
            KK+TGGTLLSRNKDF+VFYRGK+FLS DVT            LQDEEE ARLRAS+FV+P
Sbjct: 541  KKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVLP 600

Query: 415  SAYTTEESGTAGTLNETLEADSRWGKRLDDNHKDEVMRAAEVARHGILVRKLERKLTVAE 236
            S  T E+SGTAGTL ETL+A+SRWGKRLDD+HK+ ++R AEV RH  LV+KLE+KL  AE
Sbjct: 601  SIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARAE 660

Query: 235  RKLMKAERALAKVETFLKPLEQPKDSGSITDEERFMFRKLGLRMKAFLLLGRRGVFDGTV 56
            RKL++AERAL+KVE  LKP E+  D  SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTV
Sbjct: 661  RKLLRAERALSKVEESLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTV 720

Query: 55   ENMHLHWKYRELVKVIVK 2
            ENMHLHWKYRELVK+IVK
Sbjct: 721  ENMHLHWKYRELVKIIVK 738


>ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prunus persica]
            gi|462423956|gb|EMJ28219.1| hypothetical protein
            PRUPE_ppa001134mg [Prunus persica]
          Length = 899

 Score =  684 bits (1765), Expect = 0.0
 Identities = 356/538 (66%), Positives = 421/538 (78%), Gaps = 2/538 (0%)
 Frame = -1

Query: 1612 VEDIFYVEEGILPNSRGGFSRESPLGIGGSGAFGYNGEVRFPWEKPLVKEDEGRRSIRPQ 1433
            VEDIFY+EEG+LPNSRGGFS ESPLGI     FG +G+VRFPWEKP  +E +   S+R +
Sbjct: 174  VEDIFYIEEGMLPNSRGGFSEESPLGI--ENVFGGDGKVRFPWEKPKEEEKQEEGSVRRK 231

Query: 1432 SRTSLAELTLPESELRRLRHLAVSTKHKTKIGGGGVTKAIVDLIHEKWKTAEIVRLKCEG 1253
            SRTSLAELTLPESELRRL +L    KHKT+IGGGGVT+A+V++IHE+WKT+EIVRLK EG
Sbjct: 232  SRTSLAELTLPESELRRLTNLTFQKKHKTRIGGGGVTQAVVEMIHERWKTSEIVRLKIEG 291

Query: 1252 PPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYELPSMKQEKKRAQKTNDTTYTIS 1073
            PPALNMKRMHEILERKTGGLVIWRSGTS+SLYRGVSYE+PS+K  K+  +K + ++  + 
Sbjct: 292  PPALNMKRMHEILERKTGGLVIWRSGTSLSLYRGVSYEVPSVKLNKRIYKKNDISSAPLP 351

Query: 1072 T--DDNNKDRMEQNCVYDTKLAEGHSLATVKGTEEADQLPEVAYEREIDELLDGLGPRYT 899
            T  D +  D  E     + K  +  S  T +  E+ +QL EV YE E+D+LLD LGPR+ 
Sbjct: 352  TVADKSVGDFAELASYSNVKTPQEKSENTSQEKEDTEQLAEVKYEDEVDKLLDSLGPRFK 411

Query: 898  DWXXXXXXXXXXXXXXXXXPGYRPPFRVLPYGVRGSLGIKEATALRRLARVLPPHFAIGR 719
            DW                 PGY+PPFRVLPYGVR +LG+KEAT+LRRLARVLPPHFA+GR
Sbjct: 412  DWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLGLKEATSLRRLARVLPPHFALGR 471

Query: 718  SRQHQGLAMAMVKLWERSSIAKIAMKRGVQLTTSERMAEDIKKMTGGTLLSRNKDFIVFY 539
            SRQ QGLA+AM KLWE+S IAKIA+KRGVQLTTSERMAEDIK++TGG +LSRNKDF+VFY
Sbjct: 472  SRQLQGLAVAMAKLWEKSLIAKIALKRGVQLTTSERMAEDIKRLTGGVMLSRNKDFLVFY 531

Query: 538  RGKDFLSRDVTXXXXXXXXXXXXLQDEEEHARLRASSFVVPSAYTTEESGTAGTLNETLE 359
            RGK+FLS DVT            LQDEEE ARLRAS+  +P+    +  GTAGTL ETL+
Sbjct: 532  RGKNFLSPDVTEALLERERLAKSLQDEEEQARLRASAMFIPNVEVAQHFGTAGTLGETLD 591

Query: 358  ADSRWGKRLDDNHKDEVMRAAEVARHGILVRKLERKLTVAERKLMKAERALAKVETFLKP 179
            AD++WGKRLD   K++VMR A++ RH  LVRKLERKL+ AERKLM+AE+AL+KVE  LKP
Sbjct: 592  ADAKWGKRLD---KEKVMREADILRHAHLVRKLERKLSFAERKLMRAEQALSKVEESLKP 648

Query: 178  LEQPKDSGSITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIV 5
             +Q  D  SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK++V
Sbjct: 649  SKQQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKIMV 706


>ref|XP_006420115.1| hypothetical protein CICLE_v10004262mg [Citrus clementina]
            gi|557521988|gb|ESR33355.1| hypothetical protein
            CICLE_v10004262mg [Citrus clementina]
          Length = 934

 Score =  679 bits (1751), Expect = 0.0
 Identities = 364/559 (65%), Positives = 422/559 (75%), Gaps = 22/559 (3%)
 Frame = -1

Query: 1612 VEDIFYVEEGILPNSRGGFSRESPLGIGGSGAFGYNGEVRFPWEKPLVKEDEGRRSI-RP 1436
            +EDIFYVEEG+LPN+RGGFS+ESPLG+G     G +GEV+FPWEK   +  EGR  + R 
Sbjct: 184  IEDIFYVEEGLLPNARGGFSKESPLGLGEE--VGSDGEVKFPWEKRKEEVAEGRWLVKRR 241

Query: 1435 QSRTSLAELTLPESELRRLRHLAVSTKHKTKIGGGGVTKAIVDLIHEKWKTAEIVRLKCE 1256
             SRTSLAELTLPESELRRLR+L   TK KT+I G G+T+A+VD+IHEKWKT+EIVRLK E
Sbjct: 242  SSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIE 301

Query: 1255 GPPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYELPSMKQEKKRAQKTNDTTYT- 1079
            G PALNMKRMHEILERKTGGLVIWRSGT+VSLYRGVSYE+PS+ Q  KR  K N+   + 
Sbjct: 302  GAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSV-QLNKRIYKRNELPASS 360

Query: 1078 ------------ISTDDNNKDRMEQNCVYDTKLAEGHS--------LATVKGTEEADQLP 959
                        IS   N+          D    + ++        L T    +E D + 
Sbjct: 361  VSQATDKQIHKQISMSGNSLSAAADKTAQDPSNFDSYNNVHVTQVNLETASEEQETDFVR 420

Query: 958  EVAYEREIDELLDGLGPRYTDWXXXXXXXXXXXXXXXXXPGYRPPFRVLPYGVRGSLGIK 779
            EV YE E+++LLDGLGPRYTDW                 PGY+PPFRVLPYGVR +L  K
Sbjct: 421  EVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARK 480

Query: 778  EATALRRLARVLPPHFAIGRSRQHQGLAMAMVKLWERSSIAKIAMKRGVQLTTSERMAED 599
            EAT L+RLARVLPPHFA+GRSRQ QGLA+AM+KLWE+SSIAKIA+KRGVQLTTSERM ED
Sbjct: 481  EATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVED 540

Query: 598  IKKMTGGTLLSRNKDFIVFYRGKDFLSRDVTXXXXXXXXXXXXLQDEEEHARLRASSFVV 419
            IKK+TGGTLLSRNKDF+VFYRGK+FLS DVT            LQDEEE ARLRAS+FV+
Sbjct: 541  IKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVL 600

Query: 418  PSAYTTEESGTAGTLNETLEADSRWGKRLDDNHKDEVMRAAEVARHGILVRKLERKLTVA 239
            PS  T E+SGTAGTL ETL+A+SRWGKRLDD+HK+ ++R AEV RH  LV+KLE+KL  A
Sbjct: 601  PSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARA 660

Query: 238  ERKLMKAERALAKVETFLKPLEQPKDSGSITDEERFMFRKLGLRMKAFLLLGRRGVFDGT 59
            ERKL++AERAL+KVE  LKP E+  D  SIT+EERFMFRKLGLRMKAFLLLGRRGVFDGT
Sbjct: 661  ERKLLRAERALSKVEESLKPAERQADPESITNEERFMFRKLGLRMKAFLLLGRRGVFDGT 720

Query: 58   VENMHLHWKYRELVKVIVK 2
            VENMHLHWKYRELVK+IVK
Sbjct: 721  VENMHLHWKYRELVKIIVK 739


>ref|XP_006420114.1| hypothetical protein CICLE_v10004262mg [Citrus clementina]
            gi|557521987|gb|ESR33354.1| hypothetical protein
            CICLE_v10004262mg [Citrus clementina]
          Length = 860

 Score =  679 bits (1751), Expect = 0.0
 Identities = 364/559 (65%), Positives = 422/559 (75%), Gaps = 22/559 (3%)
 Frame = -1

Query: 1612 VEDIFYVEEGILPNSRGGFSRESPLGIGGSGAFGYNGEVRFPWEKPLVKEDEGRRSI-RP 1436
            +EDIFYVEEG+LPN+RGGFS+ESPLG+G     G +GEV+FPWEK   +  EGR  + R 
Sbjct: 184  IEDIFYVEEGLLPNARGGFSKESPLGLGEE--VGSDGEVKFPWEKRKEEVAEGRWLVKRR 241

Query: 1435 QSRTSLAELTLPESELRRLRHLAVSTKHKTKIGGGGVTKAIVDLIHEKWKTAEIVRLKCE 1256
             SRTSLAELTLPESELRRLR+L   TK KT+I G G+T+A+VD+IHEKWKT+EIVRLK E
Sbjct: 242  SSRTSLAELTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIE 301

Query: 1255 GPPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYELPSMKQEKKRAQKTNDTTYT- 1079
            G PALNMKRMHEILERKTGGLVIWRSGT+VSLYRGVSYE+PS+ Q  KR  K N+   + 
Sbjct: 302  GAPALNMKRMHEILERKTGGLVIWRSGTAVSLYRGVSYEVPSV-QLNKRIYKRNELPASS 360

Query: 1078 ------------ISTDDNNKDRMEQNCVYDTKLAEGHS--------LATVKGTEEADQLP 959
                        IS   N+          D    + ++        L T    +E D + 
Sbjct: 361  VSQATDKQIHKQISMSGNSLSAAADKTAQDPSNFDSYNNVHVTQVNLETASEEQETDFVR 420

Query: 958  EVAYEREIDELLDGLGPRYTDWXXXXXXXXXXXXXXXXXPGYRPPFRVLPYGVRGSLGIK 779
            EV YE E+++LLDGLGPRYTDW                 PGY+PPFRVLPYGVR +L  K
Sbjct: 421  EVKYEDEVEKLLDGLGPRYTDWPGCDPLPVDADMLPGIVPGYQPPFRVLPYGVRSTLARK 480

Query: 778  EATALRRLARVLPPHFAIGRSRQHQGLAMAMVKLWERSSIAKIAMKRGVQLTTSERMAED 599
            EAT L+RLARVLPPHFA+GRSRQ QGLA+AM+KLWE+SSIAKIA+KRGVQLTTSERM ED
Sbjct: 481  EATNLQRLARVLPPHFALGRSRQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMVED 540

Query: 598  IKKMTGGTLLSRNKDFIVFYRGKDFLSRDVTXXXXXXXXXXXXLQDEEEHARLRASSFVV 419
            IKK+TGGTLLSRNKDF+VFYRGK+FLS DVT            LQDEEE ARLRAS+FV+
Sbjct: 541  IKKLTGGTLLSRNKDFLVFYRGKNFLSPDVTEALQERERLAKSLQDEEEQARLRASAFVL 600

Query: 418  PSAYTTEESGTAGTLNETLEADSRWGKRLDDNHKDEVMRAAEVARHGILVRKLERKLTVA 239
            PS  T E+SGTAGTL ETL+A+SRWGKRLDD+HK+ ++R AEV RH  LV+KLE+KL  A
Sbjct: 601  PSIETIEKSGTAGTLKETLDANSRWGKRLDDSHKENLVREAEVRRHAYLVQKLEKKLARA 660

Query: 238  ERKLMKAERALAKVETFLKPLEQPKDSGSITDEERFMFRKLGLRMKAFLLLGRRGVFDGT 59
            ERKL++AERAL+KVE  LKP E+  D  SIT+EERFMFRKLGLRMKAFLLLGRRGVFDGT
Sbjct: 661  ERKLLRAERALSKVEESLKPAERQADPESITNEERFMFRKLGLRMKAFLLLGRRGVFDGT 720

Query: 58   VENMHLHWKYRELVKVIVK 2
            VENMHLHWKYRELVK+IVK
Sbjct: 721  VENMHLHWKYRELVKIIVK 739


>ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 835

 Score =  679 bits (1751), Expect = 0.0
 Identities = 352/541 (65%), Positives = 419/541 (77%), Gaps = 4/541 (0%)
 Frame = -1

Query: 1612 VEDIFYVEEGILPNSRGGFSRESPLGIGGSGAFGYNGEVRFPWEKPLVKEDEGRRSIRPQ 1433
            VEDIFYVEEG+LPNSRGGFS ESPLG G  G+   + EVRFPWEKP+V+E E R+S+R +
Sbjct: 144  VEDIFYVEEGMLPNSRGGFSSESPLGFGSFGSD--DREVRFPWEKPVVEELEERKSMRSR 201

Query: 1432 SRTSLAELTLPESELRRLRHLAVSTKHKTKIGGGGVTKAIVDLIHEKWKTAEIVRLKCEG 1253
            S+TSLAELTLPESEL+RL  L    KHKT+IG  GVT+A+VD IHE+WKT+EIVRLK EG
Sbjct: 202  SKTSLAELTLPESELKRLLKLTFEKKHKTRIGRSGVTQAVVDKIHERWKTSEIVRLKFEG 261

Query: 1252 PPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYELPSMKQEKKRAQKTNDTTYTIS 1073
              ALNMKRMHEILERKTGGLVIWRSG SVSLYRGVSYE+PS++Q KK  +K+ +++  + 
Sbjct: 262  EAALNMKRMHEILERKTGGLVIWRSGNSVSLYRGVSYEVPSVQQNKKIYRKSENSSKLLP 321

Query: 1072 TDD----NNKDRMEQNCVYDTKLAEGHSLATVKGTEEADQLPEVAYEREIDELLDGLGPR 905
            T       N   +  N      LA+   L +    +E D LP+V YE E+D+LLDGLGPR
Sbjct: 322  TPSYNSVGNPSDIASNSGTSAPLAK---LESTNDEKERDYLPKVNYEHEVDKLLDGLGPR 378

Query: 904  YTDWXXXXXXXXXXXXXXXXXPGYRPPFRVLPYGVRGSLGIKEATALRRLARVLPPHFAI 725
            YTDW                 PGY+PPFRVLP+GVR +LG++EATALRR+AR LPPHFA+
Sbjct: 379  YTDWPGCDPLPVDADMLPVTVPGYQPPFRVLPFGVRATLGLREATALRRIARTLPPHFAL 438

Query: 724  GRSRQHQGLAMAMVKLWERSSIAKIAMKRGVQLTTSERMAEDIKKMTGGTLLSRNKDFIV 545
            GR+RQ QGLA+AM+KLWE SSIAK+A+KRGVQLTTSERMAE+IKK+TGG LLSRNKDF+V
Sbjct: 439  GRNRQLQGLAVAMIKLWEISSIAKVALKRGVQLTTSERMAEEIKKLTGGILLSRNKDFLV 498

Query: 544  FYRGKDFLSRDVTXXXXXXXXXXXXLQDEEEHARLRASSFVVPSAYTTEESGTAGTLNET 365
            F+RGK+FLS DVT            +QDEEE ARLRASS ++P+  T+E S  AGTL ET
Sbjct: 499  FFRGKNFLSADVTQALLERERMAKVMQDEEEQARLRASSLLIPTNNTSELSAEAGTLGET 558

Query: 364  LEADSRWGKRLDDNHKDEVMRAAEVARHGILVRKLERKLTVAERKLMKAERALAKVETFL 185
            L+AD++WGK LD+ HK ++MR  E  RH  LV+KLE+KL+ AERKL +AE+AL KVE+FL
Sbjct: 559  LDADAKWGKTLDERHKQKIMREVEQLRHANLVKKLEQKLSFAERKLRRAEKALMKVESFL 618

Query: 184  KPLEQPKDSGSITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIV 5
            KP E   D  SITDEERFMFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRELVK+IV
Sbjct: 619  KPSEYKADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIV 678

Query: 4    K 2
            K
Sbjct: 679  K 679


>gb|EXB29861.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 878

 Score =  677 bits (1747), Expect = 0.0
 Identities = 349/539 (64%), Positives = 421/539 (78%), Gaps = 3/539 (0%)
 Frame = -1

Query: 1612 VEDIFYVEEGILPNSRGGFSRESPLGIGGSGAFGYNG-EVRFPWEKPLVKEDEGRRSIRP 1436
            VEDIFYVEEG+LPN RGGFS +SPLG+   G FG NG EVRFPWEKP  K ++   S+R 
Sbjct: 170  VEDIFYVEEGMLPNPRGGFSPDSPLGV--EGVFGGNGGEVRFPWEKPKEKVEKEGGSMRR 227

Query: 1435 QSRTSLAELTLPESELRRLRHLAVSTKHKTKIGGGGVTKAIVDLIHEKWKTAEIVRLKCE 1256
            +S+TSLAELTLPESELRRLR+L    KHKT+IGG GVT+ +VD+IHE+WKT EIVRLK E
Sbjct: 228  RSKTSLAELTLPESELRRLRNLTFQKKHKTRIGGAGVTQEVVDMIHERWKTLEIVRLKIE 287

Query: 1255 GPPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYELPSMKQEKKRAQKTNDTTYTI 1076
            G PALNMKRMHEILERKTGGLV+WRSGTS+SLYRGVSY++PS++ +K+  +K   ++   
Sbjct: 288  GAPALNMKRMHEILERKTGGLVVWRSGTSLSLYRGVSYQVPSLELKKRLYKKPEISSIQT 347

Query: 1075 STDDNNKD--RMEQNCVYDTKLAEGHSLATVKGTEEADQLPEVAYEREIDELLDGLGPRY 902
              D + +D  +   +   DT + +  S +  K  ++ ++ PEV YE EID++LDGLGPRY
Sbjct: 348  VGDKSTRDLAKFAPDTNTDTAIEKSESPSQEK--KDVERSPEVKYEDEIDKILDGLGPRY 405

Query: 901  TDWXXXXXXXXXXXXXXXXXPGYRPPFRVLPYGVRGSLGIKEATALRRLARVLPPHFAIG 722
             DW                 PGY+PPFR+LP+GVR SLG KEAT+LRRLARVLPPHFA+G
Sbjct: 406  EDWPGSDISPVDADMLPSIVPGYQPPFRILPFGVRPSLGPKEATSLRRLARVLPPHFAVG 465

Query: 721  RSRQHQGLAMAMVKLWERSSIAKIAMKRGVQLTTSERMAEDIKKMTGGTLLSRNKDFIVF 542
            R+RQ QGLA+AM+ LWE+S IAKIA+KRGVQLTTSERM E+IKK+TGG LLSRNKDF+VF
Sbjct: 466  RNRQLQGLAVAMINLWEKSLIAKIALKRGVQLTTSERMVEEIKKLTGGVLLSRNKDFLVF 525

Query: 541  YRGKDFLSRDVTXXXXXXXXXXXXLQDEEEHARLRASSFVVPSAYTTEESGTAGTLNETL 362
            YRGK+FLS +VT            LQDEEE ARLRAS+ +VP    TE+ G+AGTL ETL
Sbjct: 526  YRGKNFLSPEVTKALLERERLAKSLQDEEEQARLRASAIIVPRTEVTEQPGSAGTLGETL 585

Query: 361  EADSRWGKRLDDNHKDEVMRAAEVARHGILVRKLERKLTVAERKLMKAERALAKVETFLK 182
            +A+++WGKRLD+ HK EVMR AE++RH  LVRKLE+KL  +ERKLMKAERALAKVE FL+
Sbjct: 586  DANAKWGKRLDNRHKKEVMRQAEISRHANLVRKLEKKLAFSERKLMKAERALAKVEQFLQ 645

Query: 181  PLEQPKDSGSITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIV 5
            P  +  D  SIT+EERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYREL+K++V
Sbjct: 646  PANRQADPESITNEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELIKIVV 704


>ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 852

 Score =  673 bits (1736), Expect = 0.0
 Identities = 357/553 (64%), Positives = 418/553 (75%), Gaps = 17/553 (3%)
 Frame = -1

Query: 1612 VEDIFYVEEGILPNSRGGFSRESPLG---IGGSGAFGYNGEVRFPWEKPLVKEDEGRRSI 1442
            VEDIFYVEEG+LPNSRGGFS  SPLG   + G G     GEVRFPWEKP  +E E   SI
Sbjct: 156  VEDIFYVEEGMLPNSRGGFSGVSPLGTEDVFGDGG----GEVRFPWEKPREREKEEGGSI 211

Query: 1441 RPQSRTSLAELTLPESELRRLRHLAVSTKHKTKIGGGGVTKAIVDLIHEKWKTAEIVRLK 1262
            R +SRTSLAELTLPESELRRLR+L    KHKTKIGG GVT+A+V++IHE+WKTAEIVRLK
Sbjct: 212  RRRSRTSLAELTLPESELRRLRNLTFQKKHKTKIGGAGVTQAVVEMIHERWKTAEIVRLK 271

Query: 1261 CEGPPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYELPSMKQEKKRAQKTNDTTY 1082
             EGPPALNMKRMHEILERKTGGLV+WRSGTS+SLYRGVSYE+PS++  K+  ++   ++ 
Sbjct: 272  IEGPPALNMKRMHEILERKTGGLVVWRSGTSLSLYRGVSYEVPSVQLNKQIFKRNEISST 331

Query: 1081 TISTDDNNKDRMEQNCVYDTKLAEGHSLATVKG--------------TEEADQLPEVAYE 944
            ++ T            V D  +AE +  AT                 TE+ +QLPEV YE
Sbjct: 332  SLPT------------VADKSVAEPYVCATYSNVKTPLEMSENASQETEDTEQLPEVKYE 379

Query: 943  REIDELLDGLGPRYTDWXXXXXXXXXXXXXXXXXPGYRPPFRVLPYGVRGSLGIKEATAL 764
             E+DELLD +GPR+ DW                 PG++PPFR+LPYGVR +LG+KEAT+L
Sbjct: 380  DEVDELLDSIGPRFKDWPGCDPLPVDADMLPGIVPGFQPPFRILPYGVRSTLGLKEATSL 439

Query: 763  RRLARVLPPHFAIGRSRQHQGLAMAMVKLWERSSIAKIAMKRGVQLTTSERMAEDIKKMT 584
            RRLARVLPPHFA+GR+RQ QGLA+AM KLWERS IAKIA+KRGVQLTTSERMAEDIKK+T
Sbjct: 440  RRLARVLPPHFALGRNRQLQGLAVAMSKLWERSLIAKIALKRGVQLTTSERMAEDIKKLT 499

Query: 583  GGTLLSRNKDFIVFYRGKDFLSRDVTXXXXXXXXXXXXLQDEEEHARLRASSFVVPSAYT 404
            GG LLSRNKDF+VFYRGK+FLS +VT            LQDEEE ARLRAS+ V+PS   
Sbjct: 500  GGVLLSRNKDFLVFYRGKNFLSAEVTEALVERERLAKSLQDEEEQARLRASAMVMPSIEP 559

Query: 403  TEESGTAGTLNETLEADSRWGKRLDDNHKDEVMRAAEVARHGILVRKLERKLTVAERKLM 224
             +  GTAGTL ETL+AD++WGKRLD +HK++V + A + RH  LVRKLE+KL  AERKLM
Sbjct: 560  AQHFGTAGTLGETLDADAKWGKRLDVHHKEKVTQEAGILRHAKLVRKLEQKLAFAERKLM 619

Query: 223  KAERALAKVETFLKPLEQPKDSGSITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMH 44
             AE+AL+KVE  LKP +Q  D  SITDEERFMFRKLGL+MKAFLLLGRRGVFDGTVENMH
Sbjct: 620  GAEQALSKVEESLKPSKQQADPESITDEERFMFRKLGLKMKAFLLLGRRGVFDGTVENMH 679

Query: 43   LHWKYRELVKVIV 5
            LHWKYRELVK++V
Sbjct: 680  LHWKYRELVKIMV 692


>ref|XP_004495335.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cicer arietinum]
          Length = 838

 Score =  672 bits (1734), Expect = 0.0
 Identities = 350/545 (64%), Positives = 420/545 (77%), Gaps = 8/545 (1%)
 Frame = -1

Query: 1612 VEDIFYVEEGILPNSRGGFSRESPLGIGGSGAFGYNGEVRFPWEKPLV---KEDEGRRSI 1442
            VEDIFYVEEGILPN++GGFS ESP G+G  G+ G  GEVRFPWEK  V   +E+E R+ +
Sbjct: 146  VEDIFYVEEGILPNTKGGFSSESPFGVGRFGSDG--GEVRFPWEKKTVVDDEEEEDRKGL 203

Query: 1441 RPQSRTSLAELTLPESELRRLRHLAVSTKHKTKIGGGGVTKAIVDLIHEKWKTAEIVRLK 1262
            R +S+TSLAELTLPESEL+RL  L    KHKT+IGGGGVT+A+VD IHE+WKT+EIVRLK
Sbjct: 204  RKKSKTSLAELTLPESELKRLLKLTFEKKHKTRIGGGGVTQAVVDKIHERWKTSEIVRLK 263

Query: 1261 CEGPPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYELPSMKQEKKRAQKTNDTTY 1082
             EG  ALNMKRMHEILERKTGGLVIWRSG SVSLYRGVSY+ PS++  K+  +K+ +++ 
Sbjct: 264  FEGDAALNMKRMHEILERKTGGLVIWRSGNSVSLYRGVSYKDPSIQHNKQLYRKSENSSK 323

Query: 1081 TISTDDNN----KDRMEQNCVYDTKLAEGHSLATVKGTEEADQLPEVAYEREIDELLDGL 914
             +S   NN       +  N   +T L +   L +    +E D LP++ YE E+D+LLDGL
Sbjct: 324  FLSKPSNNFAVKPSELTSNSETNTSLEK---LESTNDQKEKDNLPKLTYEDEVDKLLDGL 380

Query: 913  GPRYTDWXXXXXXXXXXXXXXXXXPGYRPPFRVLPYGVRGSLGIKEATALRRLARVLPPH 734
            GPRYTDW                 PGY+PPFRVLP+GVR +LG+KEAT+LRR+AR LPPH
Sbjct: 381  GPRYTDWPGCEPLPVDADMLPPTVPGYQPPFRVLPFGVRPTLGLKEATSLRRIARGLPPH 440

Query: 733  FAIGRSRQHQGLAMAMVKLWERSSIAKIAMKRGVQLTTSERMAEDIKKMTGGTLLSRNKD 554
            FA+GR+RQ QGLA AM+KLWE+SSIAK+A+KRGVQLTTSERMAE+IKK+TGGT+LSRNKD
Sbjct: 441  FALGRNRQLQGLAAAMIKLWEKSSIAKVALKRGVQLTTSERMAEEIKKLTGGTILSRNKD 500

Query: 553  FIVFYRGKDFLSRDVTXXXXXXXXXXXXLQDEEEHARLRASSFVVPSAYTTEES-GTAGT 377
            F+VF+RGK FLS DVT            +QDEEE ARLRASS ++P+  T+E S   AGT
Sbjct: 501  FLVFFRGKSFLSSDVTEALLERERMAKAMQDEEEQARLRASSLLIPAINTSELSVAEAGT 560

Query: 376  LNETLEADSRWGKRLDDNHKDEVMRAAEVARHGILVRKLERKLTVAERKLMKAERALAKV 197
            L ETL+AD++WGK LD+ HK +VMR  E  RH  LVRKLE+KL++AERK+M+AE+AL KV
Sbjct: 561  LGETLDADAKWGKTLDERHKQKVMREVEQLRHANLVRKLEQKLSLAERKIMRAEKALMKV 620

Query: 196  ETFLKPLEQPKDSGSITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELV 17
            E  LKP E   D  SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYREL+
Sbjct: 621  EESLKPSENTADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELI 680

Query: 16   KVIVK 2
            K+IVK
Sbjct: 681  KIIVK 685


>ref|XP_002517017.1| conserved hypothetical protein [Ricinus communis]
            gi|223543652|gb|EEF45180.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 773

 Score =  671 bits (1730), Expect = 0.0
 Identities = 357/544 (65%), Positives = 418/544 (76%), Gaps = 7/544 (1%)
 Frame = -1

Query: 1612 VEDIFYVEEGILPNSRGGFSRESPLGIGGSGAFGYNGEVRFPWEKPLVKEDEGRR--SIR 1439
            VEDIFYVEEG LPNSRGGFS+ESPLG+     F  NGEVRFPWEKP  +E E  +  + R
Sbjct: 36   VEDIFYVEEGNLPNSRGGFSKESPLGV--EDVFKSNGEVRFPWEKPKREELEHEKKWTAR 93

Query: 1438 PQSRTSLAELTLPESELRRLRHLAVSTKHKTKIGGGGVTKAIVDLIHEKWKTAEIVRLKC 1259
             +SRT LAELTLPESELRRLR+L    K K ++ G GVT+ +VD IH++WKT+EIVR+K 
Sbjct: 94   SKSRTQLAELTLPESELRRLRNLTYQIKSKVRVKGAGVTQEVVDSIHDRWKTSEIVRVKV 153

Query: 1258 EGPPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYELPSM---KQEKKRAQKTNDT 1088
            EG PALNM+RMHEILERKTGGLVIWRSGTSVSLYRGVSYE PS+   KQ  KR + +N++
Sbjct: 154  EGAPALNMRRMHEILERKTGGLVIWRSGTSVSLYRGVSYEDPSVQLNKQILKRNELSNNS 213

Query: 1087 TYTISTDDNNKDRMEQNCVYDTKLAEGHSLATVKGTE--EADQLPEVAYEREIDELLDGL 914
              T +    +  +   +   D  +   +S +T +G E  E +   EV YE E+D+LL+GL
Sbjct: 214  LSTATGIIRSPSKSAASS--DLNMPHLNSDSTAEGEEKKEIEMETEVKYEDEVDKLLEGL 271

Query: 913  GPRYTDWXXXXXXXXXXXXXXXXXPGYRPPFRVLPYGVRGSLGIKEATALRRLARVLPPH 734
            GPRYTDW                 PGY+PPFR+LPYGVR SLG KEAT+LRRLAR+LPPH
Sbjct: 272  GPRYTDWAGLDPLPVDADMLPGIIPGYQPPFRILPYGVRSSLGQKEATSLRRLARILPPH 331

Query: 733  FAIGRSRQHQGLAMAMVKLWERSSIAKIAMKRGVQLTTSERMAEDIKKMTGGTLLSRNKD 554
            FA+GRSRQ QGLA AM+KLWE+SSIAKI++KRGVQLTTSERMAEDIKK+TGG LLSRNKD
Sbjct: 332  FALGRSRQLQGLADAMIKLWEKSSIAKISLKRGVQLTTSERMAEDIKKLTGGMLLSRNKD 391

Query: 553  FIVFYRGKDFLSRDVTXXXXXXXXXXXXLQDEEEHARLRASSFVVPSAYTTEESGTAGTL 374
            F+VFYRGKDFLS +VT            LQD+EE ARLRAS+  V +A T E+ GTAGTL
Sbjct: 392  FLVFYRGKDFLSPEVTEALVERERLAQSLQDKEEQARLRASALFVQTAETLEQPGTAGTL 451

Query: 373  NETLEADSRWGKRLDDNHKDEVMRAAEVARHGILVRKLERKLTVAERKLMKAERALAKVE 194
             ETL+AD+RWGK LD NH++++MR AE+ARH  LVRKLE KL  AE+KLMKAERAL+KVE
Sbjct: 452  EETLDADARWGKCLDQNHREKIMREAEIARHANLVRKLESKLAFAEKKLMKAERALSKVE 511

Query: 193  TFLKPLEQPKDSGSITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK 14
             FLKP E+  D  SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK
Sbjct: 512  VFLKPAERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVK 571

Query: 13   VIVK 2
            +I+K
Sbjct: 572  IILK 575


>ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Populus trichocarpa]
            gi|222864769|gb|EEF01900.1| hypothetical protein
            POPTR_0010s08770g [Populus trichocarpa]
          Length = 894

 Score =  667 bits (1720), Expect = 0.0
 Identities = 346/545 (63%), Positives = 415/545 (76%), Gaps = 8/545 (1%)
 Frame = -1

Query: 1612 VEDIFYVEEGILPNSRGGFSRESPLGIGGSGAFGYNGEVRFPWEKPLVKEDEGRRSIRPQ 1433
            VEDIFYVEEG+LPN+RGGFS+ESPLG+     F  +GEVRFPWEKP  +EDEG+ + R +
Sbjct: 145  VEDIFYVEEGMLPNARGGFSKESPLGV--EDVFRSDGEVRFPWEKPKKEEDEGKWTARSK 202

Query: 1432 SRTSLAELTLPESELRRLRHLAVSTKHKTKIGGGGVTKAIVDLIHEKWKTAEIVRLKCEG 1253
            SRTSLAELTLPESELRRLR+L   TK KT++GG GVT+ +VD IH+KWKT+EI R+K EG
Sbjct: 203  SRTSLAELTLPESELRRLRNLTYGTKSKTRVGGRGVTQEVVDAIHDKWKTSEIARVKVEG 262

Query: 1252 PPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYELPSMKQEKKRAQKTND------ 1091
             PALNMKRMHEILE KTGGLVIWRSG +VSLYRGVSYE P++K +K+  +K         
Sbjct: 263  APALNMKRMHEILENKTGGLVIWRSGATVSLYRGVSYEDPALKWKKRIFKKKETSSNSLP 322

Query: 1090 --TTYTISTDDNNKDRMEQNCVYDTKLAEGHSLATVKGTEEADQLPEVAYEREIDELLDG 917
              T+ TI +   N      N ++  +     ++      E   Q  +V YE E+D+LLDG
Sbjct: 323  AATSITIGSQSKNSP---DNEIHAPRPKTEINVEAANQKETKTQT-DVKYEDEVDKLLDG 378

Query: 916  LGPRYTDWXXXXXXXXXXXXXXXXXPGYRPPFRVLPYGVRGSLGIKEATALRRLARVLPP 737
            LGPRYTDW                 PGY+PPFR+LPYGVR +LG +++T+LRRLARVLPP
Sbjct: 379  LGPRYTDWPGLDPLPVDADMLPGVIPGYQPPFRILPYGVRPTLGRQDSTSLRRLARVLPP 438

Query: 736  HFAIGRSRQHQGLAMAMVKLWERSSIAKIAMKRGVQLTTSERMAEDIKKMTGGTLLSRNK 557
            HFA+GRSRQ QGLA+AM+KLWE+SSI K+A+KRGVQLTTSERMAEDIKK+TGG LLSRNK
Sbjct: 439  HFAVGRSRQLQGLAVAMIKLWEKSSIVKVALKRGVQLTTSERMAEDIKKLTGGLLLSRNK 498

Query: 556  DFIVFYRGKDFLSRDVTXXXXXXXXXXXXLQDEEEHARLRASSFVVPSAYTTEESGTAGT 377
            DF+VFYRGKDFLS +V+            LQDEEE ARLRAS+ V+PS    EESG AG+
Sbjct: 499  DFLVFYRGKDFLSPEVSEALLERERLAKSLQDEEEQARLRASALVIPSDEIMEESGIAGS 558

Query: 376  LNETLEADSRWGKRLDDNHKDEVMRAAEVARHGILVRKLERKLTVAERKLMKAERALAKV 197
            L ETL+AD++WGKRLDD HK++++R AE+ RH  +VR+LE+KL  A+RKL +AER L KV
Sbjct: 559  LEETLDADAKWGKRLDDCHKEKIIREAEIVRHASIVRRLEKKLAFAQRKLRRAERTLNKV 618

Query: 196  ETFLKPLEQPKDSGSITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELV 17
            E FLKP E+  D  SITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELV
Sbjct: 619  EGFLKPSERQADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELV 678

Query: 16   KVIVK 2
            K+I+K
Sbjct: 679  KIILK 683


>ref|XP_003590782.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
            truncatula] gi|355479830|gb|AES61033.1| Chloroplastic
            group IIA intron splicing facilitator CRS1 [Medicago
            truncatula]
          Length = 838

 Score =  665 bits (1716), Expect = 0.0
 Identities = 349/540 (64%), Positives = 415/540 (76%), Gaps = 3/540 (0%)
 Frame = -1

Query: 1612 VEDIFYVEEGILPNSRGGFSRESPLGIGGSGAFGYNGEVRFPWEKPLVKED-EGRRSIRP 1436
            +EDIFYVEEG+LPN+RGGFS ESP GIG  G+ G  GEVRFPWEKP+V E+ E R S R 
Sbjct: 142  MEDIFYVEEGMLPNTRGGFSPESPFGIGSYGS-GDGGEVRFPWEKPVVDEEVEERTSSRK 200

Query: 1435 QSRTSLAELTLPESELRRLRHLAVSTKHKTKIGGGGVTKAIVDLIHEKWKTAEIVRLKCE 1256
            +S+TS+AELTLPESELRRL  L    KHKT+IGGGGVT+A VD IHE+WKT+EIVRLK E
Sbjct: 201  KSKTSMAELTLPESELRRLLKLTFMKKHKTRIGGGGVTQAAVDKIHERWKTSEIVRLKFE 260

Query: 1255 GPPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYELPSMKQEKKRAQKTNDTTYTI 1076
            G  ALNMKRMHEILE+KTGGLVIWRSG SVSLYRGVSY+ PS++Q K+  +K   +   +
Sbjct: 261  GDAALNMKRMHEILEKKTGGLVIWRSGNSVSLYRGVSYKDPSIQQNKQLYRKNEKSLKFL 320

Query: 1075 S--TDDNNKDRMEQNCVYDTKLAEGHSLATVKGTEEADQLPEVAYEREIDELLDGLGPRY 902
            S  +DD   +  E     +TK +    L +    +E   LP+++YE E+D+LLDGLGPRY
Sbjct: 321  SAPSDDFEVEPSEFTTDSETKTSL-EKLESTNDQKEKVNLPKISYEDEVDKLLDGLGPRY 379

Query: 901  TDWXXXXXXXXXXXXXXXXXPGYRPPFRVLPYGVRGSLGIKEATALRRLARVLPPHFAIG 722
            TDW                 PGY+PPFRVLP+GVR +LG KEAT+LRR+AR LPPHFA+G
Sbjct: 380  TDWPGCEPLPVDADMLPPTVPGYQPPFRVLPFGVRPTLGFKEATSLRRIARGLPPHFALG 439

Query: 721  RSRQHQGLAMAMVKLWERSSIAKIAMKRGVQLTTSERMAEDIKKMTGGTLLSRNKDFIVF 542
            R+RQ QGLA AM+KLWE+SSIAK+A+KRGVQLTTSERMAE+IKK+TGG +LSRNKDF+VF
Sbjct: 440  RNRQLQGLAAAMIKLWEKSSIAKVALKRGVQLTTSERMAEEIKKLTGGIILSRNKDFLVF 499

Query: 541  YRGKDFLSRDVTXXXXXXXXXXXXLQDEEEHARLRASSFVVPSAYTTEESGTAGTLNETL 362
            YRGK+FLS DVT            +QDEEE ARLRASS ++P+  T+E S  AGTL ETL
Sbjct: 500  YRGKNFLSPDVTQALLEREKMAKSMQDEEEQARLRASSLILPAINTSELSAEAGTLGETL 559

Query: 361  EADSRWGKRLDDNHKDEVMRAAEVARHGILVRKLERKLTVAERKLMKAERALAKVETFLK 182
            +AD++WGK LD+ H+ +VMR  E  RH  +VRKLE KL++AERK+ +AERAL KVE  LK
Sbjct: 560  DADAKWGKTLDECHEQKVMREVEQLRHANIVRKLEEKLSLAERKIRRAERALMKVEVSLK 619

Query: 181  PLEQPKDSGSITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIVK 2
            P E   D  SITDEERFMFRKLGLRMKAFLLLGRRGVFDGT+ENMHLHWKYRELVK+IVK
Sbjct: 620  PSETRADPESITDEERFMFRKLGLRMKAFLLLGRRGVFDGTIENMHLHWKYRELVKIIVK 679


>ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
            gi|449504099|ref|XP_004162252.1| PREDICTED: chloroplastic
            group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cucumis sativus]
          Length = 874

 Score =  659 bits (1699), Expect = 0.0
 Identities = 350/540 (64%), Positives = 409/540 (75%), Gaps = 3/540 (0%)
 Frame = -1

Query: 1612 VEDIFYVEEGILPNSRGGFSRESPLGIGGSGAFGYNGEVRFPWEKPLVKEDEGRRSIRPQ 1433
            VEDI Y+EEG+LPN+RGGFS+ESP+G      FG +GEVRFPWEKP  KED    S R  
Sbjct: 171  VEDILYIEEGMLPNTRGGFSKESPMG--DENMFGSDGEVRFPWEKPKEKEDTHGDSTRRG 228

Query: 1432 SRTSLAELTLPESELRRLRHLAVSTKHKTKIGGGGVTKAIVDLIHEKWKTAEIVRLKCEG 1253
            S  SLA+LTLPE ELRRLR+L    +HK KIGGGGVT+A+VD+IHEKWK++EIVRLK  G
Sbjct: 229  S-ASLAQLTLPEPELRRLRNLTFQKRHKMKIGGGGVTQAVVDVIHEKWKSSEIVRLKILG 287

Query: 1252 PPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYELPSMKQEKKRAQKTNDTTYTIS 1073
            PPALNMKRMHEILERKTGGLVIWRSGTS+SLYRGVSYELP   Q  KR  K N+ T    
Sbjct: 288  PPALNMKRMHEILERKTGGLVIWRSGTSLSLYRGVSYELPEAPQFNKRIYKRNEITALPK 347

Query: 1072 TDDNNKDRMEQNCVYDT-KLAEGHSLATVKGTEEADQLPEVA--YEREIDELLDGLGPRY 902
            T  +     E +   +   L +  +  +++G   ++QL +V   YE E+++LLDGLGPRY
Sbjct: 348  TGASTIAPSESSSHRNVYALQQKRAETSIEGEHCSEQLTKVQVNYEDEVNKLLDGLGPRY 407

Query: 901  TDWXXXXXXXXXXXXXXXXXPGYRPPFRVLPYGVRGSLGIKEATALRRLARVLPPHFAIG 722
            TDW                 P Y PPFR+LPYGVR S+G+KEATAL+RLAR LPPHFA+G
Sbjct: 408  TDWPGLDPLPVDADMLPGVVPDYEPPFRILPYGVRSSIGVKEATALKRLARRLPPHFALG 467

Query: 721  RSRQHQGLAMAMVKLWERSSIAKIAMKRGVQLTTSERMAEDIKKMTGGTLLSRNKDFIVF 542
            R+RQ QGLA+AM KLWERS IAKIA+KRGVQLTTSERMAE+IKK+TGG LLSRNKDF+VF
Sbjct: 468  RNRQLQGLAIAMTKLWERSLIAKIALKRGVQLTTSERMAEEIKKLTGGMLLSRNKDFLVF 527

Query: 541  YRGKDFLSRDVTXXXXXXXXXXXXLQDEEEHARLRASSFVVPSAYTTEESGTAGTLNETL 362
            YRGK FLS +VT            LQD+EE ARL+AS+FVVP    TE+SGTAG+L ETL
Sbjct: 528  YRGKSFLSPEVTEALLERERLAKSLQDKEEQARLKASAFVVP-IEKTEQSGTAGSLEETL 586

Query: 361  EADSRWGKRLDDNHKDEVMRAAEVARHGILVRKLERKLTVAERKLMKAERALAKVETFLK 182
            +AD+RWGK LDD HK+ VMR AE  RH  LVRKLERKL  AERKL+KAER LAKVE F+ 
Sbjct: 587  DADARWGKALDDKHKENVMREAEQLRHTDLVRKLERKLAFAERKLVKAERTLAKVEAFMT 646

Query: 181  PLEQPKDSGSITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIVK 2
            P ++  +  SIT+EERFMFRKLGLRMKAFLLLGRR VFDGTVENMHLHWKYRELVK+++K
Sbjct: 647  PAKRQAEPDSITEEERFMFRKLGLRMKAFLLLGRREVFDGTVENMHLHWKYRELVKIMIK 706


>ref|XP_007144072.1| hypothetical protein PHAVU_007G126200g [Phaseolus vulgaris]
            gi|561017262|gb|ESW16066.1| hypothetical protein
            PHAVU_007G126200g [Phaseolus vulgaris]
          Length = 827

 Score =  657 bits (1694), Expect = 0.0
 Identities = 337/538 (62%), Positives = 412/538 (76%), Gaps = 1/538 (0%)
 Frame = -1

Query: 1612 VEDIFYVEEGILPNSRGGFSRESPLGIGGSGAFGYNGEVRFPWEKPLVKEDEGRRSIRPQ 1433
            VEDIFYV EG+LPN+RGGFS ESPLG G  G+   +GE RFPWEKP  +E E  ++IR +
Sbjct: 136  VEDIFYVGEGMLPNARGGFSPESPLGFGRFGSD--DGEARFPWEKPEAEELEESKAIRKR 193

Query: 1432 SRTSLAELTLPESELRRLRHLAVSTKHKTKIGGGGVTKAIVDLIHEKWKTAEIVRLKCEG 1253
            S+TS+AELTLPESEL+RL  L    KHKT+IG  GVT+A+VD IHE+WKT EIVRLK EG
Sbjct: 194  SKTSVAELTLPESELKRLLRLTFEKKHKTRIGRSGVTQAVVDKIHERWKTVEIVRLKFEG 253

Query: 1252 PPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYELPSMKQEKKRAQKTNDTTYTIS 1073
              ALNM+RMHEILERKTGGLVIWRSG SVSLYRGVSYE+PS++Q  +  +K+ +++  + 
Sbjct: 254  EAALNMRRMHEILERKTGGLVIWRSGNSVSLYRGVSYEVPSIQQNNQMYRKSENSSKLLP 313

Query: 1072 TDDNNKDRMEQNCVYDTKLAEG-HSLATVKGTEEADQLPEVAYEREIDELLDGLGPRYTD 896
            T   N  R       ++  +E   +L +    +E D LP+V+YE E+D+LLD LGPRYTD
Sbjct: 314  TPSYNSVRNSPTIASNSGASEPLANLESTNDQKEGDYLPKVSYELEVDKLLDDLGPRYTD 373

Query: 895  WXXXXXXXXXXXXXXXXXPGYRPPFRVLPYGVRGSLGIKEATALRRLARVLPPHFAIGRS 716
            W                 PGY+PPFRVLP+GVR +LG++EAT+LRR+AR LPPHFA+GR+
Sbjct: 374  WSGCDPLPVDADMLPATVPGYQPPFRVLPFGVRSTLGLREATSLRRIARTLPPHFALGRN 433

Query: 715  RQHQGLAMAMVKLWERSSIAKIAMKRGVQLTTSERMAEDIKKMTGGTLLSRNKDFIVFYR 536
            RQ QGLA A+VKLWE SSIAK+A+KR VQLTTSERMAE+IKK+TGG LLSRNKDF+VF+R
Sbjct: 434  RQLQGLAEAIVKLWEVSSIAKVALKRSVQLTTSERMAEEIKKLTGGILLSRNKDFLVFFR 493

Query: 535  GKDFLSRDVTXXXXXXXXXXXXLQDEEEHARLRASSFVVPSAYTTEESGTAGTLNETLEA 356
            GK+FLS DVT            +QDEEE ARLRA+S ++PS  T+E S  AGTL ETL+A
Sbjct: 494  GKNFLSADVTQTLLERERTAKVMQDEEEQARLRAASLLIPSNNTSELSAEAGTLGETLDA 553

Query: 355  DSRWGKRLDDNHKDEVMRAAEVARHGILVRKLERKLTVAERKLMKAERALAKVETFLKPL 176
            D++WGK LD+ HK ++MR  E  RH  LV+KLE+KL++AERKLM+AE+AL KVE  LKP 
Sbjct: 554  DAKWGKTLDERHKQKIMREVEQLRHANLVKKLEQKLSLAERKLMRAEKALMKVELSLKPS 613

Query: 175  EQPKDSGSITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIVK 2
            E   D  SITDEERFMFRKLGL+MKAFLLLGRRGVFDGT+ENMHLHWKYR+LVK+I+K
Sbjct: 614  EHKADPDSITDEERFMFRKLGLKMKAFLLLGRRGVFDGTIENMHLHWKYRDLVKIILK 671


>ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum tuberosum]
          Length = 883

 Score =  653 bits (1685), Expect = 0.0
 Identities = 346/537 (64%), Positives = 402/537 (74%)
 Frame = -1

Query: 1612 VEDIFYVEEGILPNSRGGFSRESPLGIGGSGAFGYNGEVRFPWEKPLVKEDEGRRSIRPQ 1433
            +EDIF+VEEGILPN RGGFS ESP G         +G VRFPWE+PLVK++E   S+  +
Sbjct: 186  IEDIFFVEEGILPNVRGGFSEESPFG--DENVIAKDGVVRFPWERPLVKKEESN-SMASR 242

Query: 1432 SRTSLAELTLPESELRRLRHLAVSTKHKTKIGGGGVTKAIVDLIHEKWKTAEIVRLKCEG 1253
            SRT LAELTLP SELRRL +LA+  K+K++I G GVT+ +V+ I EKWKT+E+VRLK EG
Sbjct: 243  SRTHLAELTLPASELRRLTNLALRIKNKSRITGAGVTQQVVETIREKWKTSEVVRLKVEG 302

Query: 1252 PPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYELPSMKQEKKRAQKTNDTTYTIS 1073
             PALNMKRMHEILERKTGGLVIWRSGTSV+LYRGVSYE PS +  KKR  + ++  +  S
Sbjct: 303  APALNMKRMHEILERKTGGLVIWRSGTSVALYRGVSYETPSERM-KKRIMRRDEIRHKNS 361

Query: 1072 TDDNNKDRMEQNCVYDTKLAEGHSLATVKGTEEADQLPEVAYEREIDELLDGLGPRYTDW 893
               + +    QN   D       S+ T +  +  D+  EV YE E+D+LLDGLGPRYTDW
Sbjct: 362  PIVDGESN--QNPRNDVDSLREDSVDTSEENKNIDRQSEVNYEDEVDKLLDGLGPRYTDW 419

Query: 892  XXXXXXXXXXXXXXXXXPGYRPPFRVLPYGVRGSLGIKEATALRRLARVLPPHFAIGRSR 713
                             PGY+PPFR+LPYGVR +L  +EATALRRLARVLPPHFA+GRSR
Sbjct: 420  PGSGPLPVDADLLPGIVPGYQPPFRILPYGVRSTLAAREATALRRLARVLPPHFALGRSR 479

Query: 712  QHQGLAMAMVKLWERSSIAKIAMKRGVQLTTSERMAEDIKKMTGGTLLSRNKDFIVFYRG 533
            QHQGLA  MVKLW+RSSIAKIA+KRGVQLTTSERMAEDIKK+TGG LLSRNKDF+VFYRG
Sbjct: 480  QHQGLASVMVKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYRG 539

Query: 532  KDFLSRDVTXXXXXXXXXXXXLQDEEEHARLRASSFVVPSAYTTEESGTAGTLNETLEAD 353
            KDFLS +V             LQDEEE ARLRAS  +     T   S TAGTL ETL+AD
Sbjct: 540  KDFLSPEVAEALLEKERLAKTLQDEEEKARLRASLLLTAGVTTINSSRTAGTLGETLDAD 599

Query: 352  SRWGKRLDDNHKDEVMRAAEVARHGILVRKLERKLTVAERKLMKAERALAKVETFLKPLE 173
            +RWGKRLDD  K+ VMR AE+ RHG LVRKLE+KL  AERKLMKAER L+KVE  L PL+
Sbjct: 600  ARWGKRLDDKDKENVMREAELLRHGDLVRKLEKKLAFAERKLMKAERVLSKVEETLNPLD 659

Query: 172  QPKDSGSITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIVK 2
            +  +  S+TDEERFMFRKLGLRMKAFLLLGRRG+FDGTVENMHLHWKYRELVK++VK
Sbjct: 660  RRAEPDSLTDEERFMFRKLGLRMKAFLLLGRRGIFDGTVENMHLHWKYRELVKIMVK 716


>ref|XP_004247646.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 883

 Score =  652 bits (1682), Expect = 0.0
 Identities = 345/539 (64%), Positives = 401/539 (74%), Gaps = 2/539 (0%)
 Frame = -1

Query: 1612 VEDIFYVEEGILPNSRGGFSRESPLGIGGSGAFGYNGEVRFPWEKPLVKEDEGRRSIRPQ 1433
            +EDIF+VEEGILPN RGGFS E+P G         +G V FPWEKPLVK++E   S+  +
Sbjct: 186  IEDIFFVEEGILPNVRGGFSEETPFG--DENIIAKDGVVGFPWEKPLVKKEESN-SMASR 242

Query: 1432 SRTSLAELTLPESELRRLRHLAVSTKHKTKIGGGGVTKAIVDLIHEKWKTAEIVRLKCEG 1253
            SRT LAELTLP SELRRL +LA+  K+K++I G GVT+ +V+ I EKWKT+E+VRLK EG
Sbjct: 243  SRTHLAELTLPASELRRLTNLALRIKNKSRITGAGVTQQVVETIREKWKTSEVVRLKVEG 302

Query: 1252 PPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYELPSMKQEKK--RAQKTNDTTYT 1079
             PALNMKRMHEILERKTGGLVIWRSGTSV+LYRGVSYE PS + +K+  R  +       
Sbjct: 303  APALNMKRMHEILERKTGGLVIWRSGTSVALYRGVSYETPSERMKKRIMRRDEIRQKNSP 362

Query: 1078 ISTDDNNKDRMEQNCVYDTKLAEGHSLATVKGTEEADQLPEVAYEREIDELLDGLGPRYT 899
            I   ++N     QN   D       S+ T +  +  D+  EV YE E+D+LLDGLGPRYT
Sbjct: 363  IVDGESN-----QNSRNDVDSLREDSVDTSEENKSIDRQSEVNYEDEVDKLLDGLGPRYT 417

Query: 898  DWXXXXXXXXXXXXXXXXXPGYRPPFRVLPYGVRGSLGIKEATALRRLARVLPPHFAIGR 719
            DW                 PGY+PPFR+LPYGVR +L  +EATALRRLARVLPPHFA+GR
Sbjct: 418  DWPGSGPLPVDADLLPGIVPGYQPPFRILPYGVRSTLAAREATALRRLARVLPPHFALGR 477

Query: 718  SRQHQGLAMAMVKLWERSSIAKIAMKRGVQLTTSERMAEDIKKMTGGTLLSRNKDFIVFY 539
            SRQHQGLA  MVKLW+RSSIAKIA+KRGVQLTTSERMAEDIKK+TGG LLSRNKDF+VFY
Sbjct: 478  SRQHQGLASVMVKLWQRSSIAKIAIKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFY 537

Query: 538  RGKDFLSRDVTXXXXXXXXXXXXLQDEEEHARLRASSFVVPSAYTTEESGTAGTLNETLE 359
            RGKDFLS +V             LQDEEE ARLRAS  +     T   S TAGTL ETL+
Sbjct: 538  RGKDFLSPEVAEALLEKERLAKTLQDEEEKARLRASLNLTAGVTTINSSRTAGTLGETLD 597

Query: 358  ADSRWGKRLDDNHKDEVMRAAEVARHGILVRKLERKLTVAERKLMKAERALAKVETFLKP 179
            AD+RWGKRLDD HK+ VMR AE+ RHG LVRKLE+KL  AE+KLMKAER L+KVE  L P
Sbjct: 598  ADARWGKRLDDKHKENVMREAELLRHGDLVRKLEKKLAFAEKKLMKAERVLSKVEETLNP 657

Query: 178  LEQPKDSGSITDEERFMFRKLGLRMKAFLLLGRRGVFDGTVENMHLHWKYRELVKVIVK 2
            L++  +  S+TDEERFMFRKLGLRMKAFLLLGRRG+FDGTVENMHLHWKYRELVK++VK
Sbjct: 658  LDRHAEPDSLTDEERFMFRKLGLRMKAFLLLGRRGIFDGTVENMHLHWKYRELVKIMVK 716


>ref|XP_007034975.1| CRM family member 3A isoform 2 [Theobroma cacao]
            gi|508714004|gb|EOY05901.1| CRM family member 3A isoform
            2 [Theobroma cacao]
          Length = 685

 Score =  646 bits (1666), Expect = 0.0
 Identities = 333/510 (65%), Positives = 390/510 (76%), Gaps = 1/510 (0%)
 Frame = -1

Query: 1612 VEDIFYVEEGILPNSRGGFSRESPLGIGGSGAFGYNGEVRFPWEKPLVKEDEGRRSIRPQ 1433
            +EDIFYVEEG+LPN+RGGFS+ESPLG+     FG +GEVRFPWEK    E+EG  + R  
Sbjct: 170  IEDIFYVEEGMLPNNRGGFSKESPLGM--ENVFGSDGEVRFPWEKRKEDEEEGGWTARRD 227

Query: 1432 SRTSLAELTLPESELRRLRHLAVSTKHKTKIGGGGVTKAIVDLIHEKWKTAEIVRLKCEG 1253
            S+TSLAELTLPESELRRLR+L   TK K +I G GVT+ +VD IHEKWKT EIVRLK EG
Sbjct: 228  SKTSLAELTLPESELRRLRNLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEEIVRLKIEG 287

Query: 1252 PPALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYELPSMKQEKKRAQKTNDTTYTI- 1076
             PALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYE+PS+   K+  ++    TY + 
Sbjct: 288  APALNMKRMHEILERKTGGLVIWRSGTSVSLYRGVSYEVPSVHLSKRIYKRNETFTYALP 347

Query: 1075 STDDNNKDRMEQNCVYDTKLAEGHSLATVKGTEEADQLPEVAYEREIDELLDGLGPRYTD 896
            S  D  KD        D    + +S    +G ++ + LPE+ YE E+D+LL+GLGPRYTD
Sbjct: 348  SVSDKTKDLSSLGSHKDVVSPQANSETAAEGNKDTESLPEIRYEDEVDKLLEGLGPRYTD 407

Query: 895  WXXXXXXXXXXXXXXXXXPGYRPPFRVLPYGVRGSLGIKEATALRRLARVLPPHFAIGRS 716
            W                  GY+PPFRVLPYGVR SLG+KEAT+LRRLARVLPPHFAIGRS
Sbjct: 408  WPGCNPLPVDADLLPGIVAGYQPPFRVLPYGVRSSLGLKEATSLRRLARVLPPHFAIGRS 467

Query: 715  RQHQGLAMAMVKLWERSSIAKIAMKRGVQLTTSERMAEDIKKMTGGTLLSRNKDFIVFYR 536
            RQ QGLA+AM+KLWE+SSIAKIA+KRGVQLTTSERMAEDIKK+TGG LLSRNKDF+VFYR
Sbjct: 468  RQLQGLAVAMIKLWEKSSIAKIALKRGVQLTTSERMAEDIKKLTGGMLLSRNKDFLVFYR 527

Query: 535  GKDFLSRDVTXXXXXXXXXXXXLQDEEEHARLRASSFVVPSAYTTEESGTAGTLNETLEA 356
            GK+FLS DV             LQDEEE ARLRAS+F+VPS    E+SG AGTL ETL+A
Sbjct: 528  GKNFLSADVAEALVERERLAKSLQDEEEQARLRASAFLVPSTEVAEQSGAAGTLGETLDA 587

Query: 355  DSRWGKRLDDNHKDEVMRAAEVARHGILVRKLERKLTVAERKLMKAERALAKVETFLKPL 176
            D+RWGKRLD++HK++VM+ AE+ RH  LVRKL++ L  A+RKL+KAERAL KVE +LKP 
Sbjct: 588  DARWGKRLDNHHKEKVMKEAEILRHANLVRKLDKNLAFADRKLLKAERALTKVEDYLKPA 647

Query: 175  EQPKDSGSITDEERFMFRKLGLRMKAFLLL 86
            ++  D  SITDEERFMFRKLGLRMKAFLLL
Sbjct: 648  DRQADPESITDEERFMFRKLGLRMKAFLLL 677