BLASTX nr result
ID: Sinomenium22_contig00010692
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00010692
(867 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prun... 159 1e-36
ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron sp... 159 2e-36
emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera] 157 5e-36
ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron sp... 154 3e-35
ref|XP_006420115.1| hypothetical protein CICLE_v10004262mg [Citr... 153 9e-35
ref|XP_006420114.1| hypothetical protein CICLE_v10004262mg [Citr... 153 9e-35
ref|XP_007034977.1| CRM family member 3A isoform 4 [Theobroma ca... 152 2e-34
ref|XP_007034976.1| CRM family member 3A isoform 3 [Theobroma ca... 152 2e-34
ref|XP_007034975.1| CRM family member 3A isoform 2 [Theobroma ca... 152 2e-34
ref|XP_007034974.1| CRM family member 3A isoform 1 [Theobroma ca... 152 2e-34
ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron sp... 150 6e-34
ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron sp... 150 8e-34
ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Popu... 149 1e-33
gb|EXB29861.1| Chloroplastic group IIA intron splicing facilitat... 142 2e-31
ref|XP_004495335.1| PREDICTED: chloroplastic group IIA intron sp... 140 8e-31
ref|XP_007144072.1| hypothetical protein PHAVU_007G126200g [Phas... 138 2e-30
ref|XP_002517017.1| conserved hypothetical protein [Ricinus comm... 136 1e-29
ref|XP_003590782.1| Chloroplastic group IIA intron splicing faci... 134 4e-29
ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron sp... 132 2e-28
ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron sp... 132 2e-28
>ref|XP_007227020.1| hypothetical protein PRUPE_ppa001134mg [Prunus persica]
gi|462423956|gb|EMJ28219.1| hypothetical protein
PRUPE_ppa001134mg [Prunus persica]
Length = 899
Score = 159 bits (403), Expect = 1e-36
Identities = 113/312 (36%), Positives = 149/312 (47%), Gaps = 68/312 (21%)
Frame = +2
Query: 134 MSLALSWQSPSTTSLDSFPSCFPRFHGVHLQISRHGLSISFRKYDFCVAH---------- 283
M+L S Q T+ DSF S F +FHG H+ + R G SI F+K+ F H
Sbjct: 1 MTLVPSRQLYPTSLFDSFQSSFSKFHGPHIHLFRCGSSIPFKKHTFYATHYTISSTLNPE 60
Query: 284 -------NAISSGSAPEKYPP----GNSSFVFKTTRT----------------------- 361
N + +Y P +SS++ K +
Sbjct: 61 QNPLRKSNFVRKNQPISQYKPKKNFSSSSWIDKWNESHKHNRPKPPRAVLDYQSSESGNL 120
Query: 362 ----------------DSTKMEKIVEKLKRFGYAEEASETK----ERVPGRKSLEHIFYA 481
+ MEKIVEKLK+FGY ++++E K + V + S+E IFY
Sbjct: 121 SGSGYAEGDGGGGRNSSGSTMEKIVEKLKKFGYVDDSNENKGEVRDSVIEKGSVEDIFYI 180
Query: 482 EEEGNSRNSQGRFSIESPLEVGNDLVTDGEVRVPLEK----EEEGRNLARWRNRTSLAXX 649
EE G NS+G FS ESPL + N DG+VR P EK E++ R ++RTSLA
Sbjct: 181 EE-GMLPNSRGGFSEESPLGIENVFGGDGKVRFPWEKPKEEEKQEEGSVRRKSRTSLAEL 239
Query: 650 XXXXXXXXXXXXXXXXXDESLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKR 829
+IG GVTQA+V+MIHE+WKT E+VRLK +G ALNMKR
Sbjct: 240 TLPESELRRLTNLTFQKKHKTRIGGGGVTQAVVEMIHERWKTSEIVRLKIEGPPALNMKR 299
Query: 830 MHEILEKKTGGL 865
MHEILE+KTGGL
Sbjct: 300 MHEILERKTGGL 311
>ref|XP_002280226.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic [Vitis vinifera]
gi|297737163|emb|CBI26364.3| unnamed protein product
[Vitis vinifera]
Length = 902
Score = 159 bits (401), Expect = 2e-36
Identities = 116/291 (39%), Positives = 141/291 (48%), Gaps = 56/291 (19%)
Frame = +2
Query: 161 PSTTS-LDSFPSCFPRFHGVHLQISRHGLSISFRKYDFCVAHNAISSGSAPEKYPPGNSS 337
P+TTS LDSF H LQ R+G S FR + VA N I+S S P S+
Sbjct: 11 PTTTSFLDSF-------HSTRLQFFRYGSSNRFRTHSSYVARNTIASNSTN---PQRKSN 60
Query: 338 FVFKTT----------------------------------------------RTDS---- 367
VF T R+D
Sbjct: 61 IVFTNTPVSQYDSGGVSSSGGNWIDKWNGPHQKSHPKESRPVMNYRNSETVSRSDGGSGG 120
Query: 368 -TKMEKIVEKLKRFGYAEEASETKERVPGR----KSLEHIFYAEEEGNSRNSQGRFSIES 532
+ MEKIVEKLK+FGY ++ ETKE V R S+E IFY EE G N QG FS++S
Sbjct: 121 GSTMEKIVEKLKKFGYMDDVKETKENVQERIIEKGSIEDIFYIEE-GILPNPQGGFSLDS 179
Query: 533 PLEVGNDLVTDGEVRVPLEKEEEGRNLARWRNRTSLAXXXXXXXXXXXXXXXXXXXDESL 712
PL V N +GEVR P E+ + R ++RTSLA
Sbjct: 180 PLGVENKGDGNGEVRFPWERPKVEEGSVRIKSRTSLAELTLPESELRRLRNLTMRTKNKT 239
Query: 713 KIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGL 865
KIG GVTQA+VDMI EKWKT E+V+LKC+GA ALNM+R+HEILE+KTGGL
Sbjct: 240 KIGGGGVTQAVVDMIREKWKTSEIVKLKCEGAAALNMRRIHEILERKTGGL 290
>emb|CAN79523.1| hypothetical protein VITISV_010525 [Vitis vinifera]
Length = 902
Score = 157 bits (397), Expect = 5e-36
Identities = 115/291 (39%), Positives = 140/291 (48%), Gaps = 56/291 (19%)
Frame = +2
Query: 161 PSTTS-LDSFPSCFPRFHGVHLQISRHGLSISFRKYDFCVAHNAISSGSAPEKYPPGNSS 337
P+TTS LDSF H LQ R+G S FR + V N I+S S P S+
Sbjct: 11 PTTTSFLDSF-------HSTRLQFFRYGSSNRFRTHSSYVTRNTIASNSTN---PQRKSN 60
Query: 338 FVFKTT----------------------------------------------RTDS---- 367
VF T R+D
Sbjct: 61 IVFTNTPVSQYDSGGVSSSGGNWIDKWNGPHQKSHPKEXRPVMNYRNSETVSRSDGGSGG 120
Query: 368 -TKMEKIVEKLKRFGYAEEASETKERVPGR----KSLEHIFYAEEEGNSRNSQGRFSIES 532
+ MEKIVEKLK+FGY ++ ETKE V R S+E IFY EE G N QG FS++S
Sbjct: 121 GSTMEKIVEKLKKFGYMDDVKETKENVQERIIEKGSIEDIFYIEE-GILPNPQGGFSLDS 179
Query: 533 PLEVGNDLVTDGEVRVPLEKEEEGRNLARWRNRTSLAXXXXXXXXXXXXXXXXXXXDESL 712
PL V N +GEVR P E+ + R ++RTSLA
Sbjct: 180 PLGVENKGDGNGEVRFPWERPKVEEGSVRIKSRTSLAELTLPESELRRLRNLTMRTKNKT 239
Query: 713 KIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGL 865
KIG GVTQA+VDMI EKWKT E+V+LKC+GA ALNM+R+HEILE+KTGGL
Sbjct: 240 KIGGGGVTQAVVDMIREKWKTSEIVKLKCEGAAALNMRRIHEILERKTGGL 290
>ref|XP_006489518.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Citrus sinensis]
Length = 933
Score = 154 bits (390), Expect = 3e-35
Identities = 121/312 (38%), Positives = 146/312 (46%), Gaps = 77/312 (24%)
Frame = +2
Query: 161 PSTTSLDSFPSCFPRFHGVHLQISRHGLSI--------------------------SFRK 262
P+T DSF S F +FHG H R G SI SF
Sbjct: 11 PATAIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNRFFYQNFSSNSAHEKNPPRKTCSFST 70
Query: 263 YDFCVAH------NAISSGS------APEKY----PPGNSSFVFKTT---------RTDS 367
+F H N SS S P KY PP S K RTDS
Sbjct: 71 NNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVDLSALGFARTDS 130
Query: 368 ------------TKMEKIVEKLKRFGYA----------EEASETKERVPGRKSLEHIFYA 481
M KIVEKLK+FGY E + KERV + S+E IFY
Sbjct: 131 DGNGVGGVDDGGNTMGKIVEKLKKFGYVGDGDGDGDNDERRGQGKERVIEKGSIEDIFYV 190
Query: 482 EEEGNSRNSQGRFSIESPLEVGNDLVTDGEVRVPLEKEEE----GRNLARWRNRTSLAXX 649
EE G N++G FS ESPL +G ++ +DGEV+ P EK +E GR L + +RTSLA
Sbjct: 191 EE-GLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLVKRSSRTSLAEL 249
Query: 650 XXXXXXXXXXXXXXXXXDESLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKR 829
+I +G+TQA+VD+IHEKWKT E+VRLK +GA ALNMKR
Sbjct: 250 TLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMKR 309
Query: 830 MHEILEKKTGGL 865
MHEILE+KTGGL
Sbjct: 310 MHEILERKTGGL 321
>ref|XP_006420115.1| hypothetical protein CICLE_v10004262mg [Citrus clementina]
gi|557521988|gb|ESR33355.1| hypothetical protein
CICLE_v10004262mg [Citrus clementina]
Length = 934
Score = 153 bits (386), Expect = 9e-35
Identities = 114/313 (36%), Positives = 144/313 (46%), Gaps = 78/313 (24%)
Frame = +2
Query: 161 PSTTSLDSFPSCFPRFHGVHLQISRHGLSISFRKYDF----------------------- 271
P+T DSF S F +FHG H R G SI + + F
Sbjct: 11 PATAIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNHFFYQNFSSNSAHEKNTPRKICSFST 70
Query: 272 ---------------CVAHNAISSGSAPEKY----PPGNSSFVFKTT---------RTDS 367
C + + + + P KY PP S K RTDS
Sbjct: 71 NNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVDLSALGFARTDS 130
Query: 368 ------------TKMEKIVEKLKRFGYA----------EEASETKERVPGRKSLEHIFYA 481
+ M KIVEKLK+FGY E + KERV + S+E IFY
Sbjct: 131 DGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDNDERRGQGKERVIEKGSIEDIFYV 190
Query: 482 EEEGNSRNSQGRFSIESPLEVGNDLVTDGEVRVPLEKEEEGRNLARW-----RNRTSLAX 646
EE G N++G FS ESPL +G ++ +DGEV+ P EK +E RW +RTSLA
Sbjct: 191 EE-GLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAE 249
Query: 647 XXXXXXXXXXXXXXXXXXDESLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMK 826
+I +G+TQA+VD+IHEKWKT E+VRLK +GA ALNMK
Sbjct: 250 LTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMK 309
Query: 827 RMHEILEKKTGGL 865
RMHEILE+KTGGL
Sbjct: 310 RMHEILERKTGGL 322
>ref|XP_006420114.1| hypothetical protein CICLE_v10004262mg [Citrus clementina]
gi|557521987|gb|ESR33354.1| hypothetical protein
CICLE_v10004262mg [Citrus clementina]
Length = 860
Score = 153 bits (386), Expect = 9e-35
Identities = 114/313 (36%), Positives = 144/313 (46%), Gaps = 78/313 (24%)
Frame = +2
Query: 161 PSTTSLDSFPSCFPRFHGVHLQISRHGLSISFRKYDF----------------------- 271
P+T DSF S F +FHG H R G SI + + F
Sbjct: 11 PATAIFDSFQSSFSKFHGTHFHFFRCGHSIPLKNHFFYQNFSSNSAHEKNTPRKICSFST 70
Query: 272 ---------------CVAHNAISSGSAPEKY----PPGNSSFVFKTT---------RTDS 367
C + + + + P KY PP S K RTDS
Sbjct: 71 NNFFSQHDKDDNANLCSSSSWLVKWNKPNKYNRLKPPQASVNYRKNNVDLSALGFARTDS 130
Query: 368 ------------TKMEKIVEKLKRFGYA----------EEASETKERVPGRKSLEHIFYA 481
+ M KIVEKLK+FGY E + KERV + S+E IFY
Sbjct: 131 DGNGVGGVDDGGSTMGKIVEKLKKFGYVGDGDGDGDNDERRGQGKERVIEKGSIEDIFYV 190
Query: 482 EEEGNSRNSQGRFSIESPLEVGNDLVTDGEVRVPLEKEEEGRNLARW-----RNRTSLAX 646
EE G N++G FS ESPL +G ++ +DGEV+ P EK +E RW +RTSLA
Sbjct: 191 EE-GLLPNARGGFSKESPLGLGEEVGSDGEVKFPWEKRKEEVAEGRWLVKRRSSRTSLAE 249
Query: 647 XXXXXXXXXXXXXXXXXXDESLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMK 826
+I +G+TQA+VD+IHEKWKT E+VRLK +GA ALNMK
Sbjct: 250 LTLPESELRRLRNLTFQTKSKTRIKGAGLTQAVVDIIHEKWKTSEIVRLKIEGAPALNMK 309
Query: 827 RMHEILEKKTGGL 865
RMHEILE+KTGGL
Sbjct: 310 RMHEILERKTGGL 322
>ref|XP_007034977.1| CRM family member 3A isoform 4 [Theobroma cacao]
gi|508714006|gb|EOY05903.1| CRM family member 3A isoform
4 [Theobroma cacao]
Length = 645
Score = 152 bits (383), Expect = 2e-34
Identities = 94/181 (51%), Positives = 112/181 (61%), Gaps = 11/181 (6%)
Frame = +2
Query: 356 RTDSTKMEKIVEKLKRFGYAEEASETKE-------RVPGRKSLEHIFYAEEEGNSRNSQG 514
R+ S+ MEKIVEKLK+FGY E +E KE RV R S+E IFY EE G N++G
Sbjct: 128 RSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEPKRVIERGSIEDIFYVEE-GMLPNNRG 186
Query: 515 RFSIESPLEVGNDLVTDGEVRVPLEK----EEEGRNLARWRNRTSLAXXXXXXXXXXXXX 682
FS ESPL + N +DGEVR P EK EEEG AR ++TSLA
Sbjct: 187 GFSKESPLGMENVFGSDGEVRFPWEKRKEDEEEGGWTARRDSKTSLAELTLPESELRRLR 246
Query: 683 XXXXXXDESLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGG 862
++I +GVTQ +VD IHEKWKT E+VRLK +GA ALNMKRMHEILE+KTGG
Sbjct: 247 NLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEEIVRLKIEGAPALNMKRMHEILERKTGG 306
Query: 863 L 865
L
Sbjct: 307 L 307
>ref|XP_007034976.1| CRM family member 3A isoform 3 [Theobroma cacao]
gi|508714005|gb|EOY05902.1| CRM family member 3A isoform
3 [Theobroma cacao]
Length = 856
Score = 152 bits (383), Expect = 2e-34
Identities = 94/181 (51%), Positives = 112/181 (61%), Gaps = 11/181 (6%)
Frame = +2
Query: 356 RTDSTKMEKIVEKLKRFGYAEEASETKE-------RVPGRKSLEHIFYAEEEGNSRNSQG 514
R+ S+ MEKIVEKLK+FGY E +E KE RV R S+E IFY EE G N++G
Sbjct: 128 RSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEPKRVIERGSIEDIFYVEE-GMLPNNRG 186
Query: 515 RFSIESPLEVGNDLVTDGEVRVPLEK----EEEGRNLARWRNRTSLAXXXXXXXXXXXXX 682
FS ESPL + N +DGEVR P EK EEEG AR ++TSLA
Sbjct: 187 GFSKESPLGMENVFGSDGEVRFPWEKRKEDEEEGGWTARRDSKTSLAELTLPESELRRLR 246
Query: 683 XXXXXXDESLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGG 862
++I +GVTQ +VD IHEKWKT E+VRLK +GA ALNMKRMHEILE+KTGG
Sbjct: 247 NLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEEIVRLKIEGAPALNMKRMHEILERKTGG 306
Query: 863 L 865
L
Sbjct: 307 L 307
>ref|XP_007034975.1| CRM family member 3A isoform 2 [Theobroma cacao]
gi|508714004|gb|EOY05901.1| CRM family member 3A isoform
2 [Theobroma cacao]
Length = 685
Score = 152 bits (383), Expect = 2e-34
Identities = 94/181 (51%), Positives = 112/181 (61%), Gaps = 11/181 (6%)
Frame = +2
Query: 356 RTDSTKMEKIVEKLKRFGYAEEASETKE-------RVPGRKSLEHIFYAEEEGNSRNSQG 514
R+ S+ MEKIVEKLK+FGY E +E KE RV R S+E IFY EE G N++G
Sbjct: 128 RSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEPKRVIERGSIEDIFYVEE-GMLPNNRG 186
Query: 515 RFSIESPLEVGNDLVTDGEVRVPLEK----EEEGRNLARWRNRTSLAXXXXXXXXXXXXX 682
FS ESPL + N +DGEVR P EK EEEG AR ++TSLA
Sbjct: 187 GFSKESPLGMENVFGSDGEVRFPWEKRKEDEEEGGWTARRDSKTSLAELTLPESELRRLR 246
Query: 683 XXXXXXDESLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGG 862
++I +GVTQ +VD IHEKWKT E+VRLK +GA ALNMKRMHEILE+KTGG
Sbjct: 247 NLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEEIVRLKIEGAPALNMKRMHEILERKTGG 306
Query: 863 L 865
L
Sbjct: 307 L 307
>ref|XP_007034974.1| CRM family member 3A isoform 1 [Theobroma cacao]
gi|508714003|gb|EOY05900.1| CRM family member 3A isoform
1 [Theobroma cacao]
Length = 876
Score = 152 bits (383), Expect = 2e-34
Identities = 94/181 (51%), Positives = 112/181 (61%), Gaps = 11/181 (6%)
Frame = +2
Query: 356 RTDSTKMEKIVEKLKRFGYAEEASETKE-------RVPGRKSLEHIFYAEEEGNSRNSQG 514
R+ S+ MEKIVEKLK+FGY E +E KE RV R S+E IFY EE G N++G
Sbjct: 128 RSSSSTMEKIVEKLKKFGYIGEENEQKEKGEEEPKRVIERGSIEDIFYVEE-GMLPNNRG 186
Query: 515 RFSIESPLEVGNDLVTDGEVRVPLEK----EEEGRNLARWRNRTSLAXXXXXXXXXXXXX 682
FS ESPL + N +DGEVR P EK EEEG AR ++TSLA
Sbjct: 187 GFSKESPLGMENVFGSDGEVRFPWEKRKEDEEEGGWTARRDSKTSLAELTLPESELRRLR 246
Query: 683 XXXXXXDESLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGG 862
++I +GVTQ +VD IHEKWKT E+VRLK +GA ALNMKRMHEILE+KTGG
Sbjct: 247 NLTFRTKSKVRIKGAGVTQEVVDTIHEKWKTEEIVRLKIEGAPALNMKRMHEILERKTGG 306
Query: 863 L 865
L
Sbjct: 307 L 307
>ref|XP_003556362.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Glycine max]
Length = 835
Score = 150 bits (379), Expect = 6e-34
Identities = 89/173 (51%), Positives = 107/173 (61%), Gaps = 4/173 (2%)
Frame = +2
Query: 359 TDSTKMEKIVEKLKRFGYAEEASETKERVPGRKSLEHIFYAEEEGNSRNSQGRFSIESPL 538
T + M++IVEKLK+FGY E+ + KERV + S+E IFY EE G NS+G FS ESPL
Sbjct: 110 TGGSTMDRIVEKLKKFGYVEDGIQNKERVIEKGSVEDIFYVEE-GMLPNSRGGFSSESPL 168
Query: 539 EVGNDLVTDGEVRVPLEK----EEEGRNLARWRNRTSLAXXXXXXXXXXXXXXXXXXXDE 706
G+ D EVR P EK E E R R R++TSLA
Sbjct: 169 GFGSFGSDDREVRFPWEKPVVEELEERKSMRSRSKTSLAELTLPESELKRLLKLTFEKKH 228
Query: 707 SLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGL 865
+IG SGVTQA+VD IHE+WKT E+VRLK +G ALNMKRMHEILE+KTGGL
Sbjct: 229 KTRIGRSGVTQAVVDKIHERWKTSEIVRLKFEGEAALNMKRMHEILERKTGGL 281
>ref|XP_004291748.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 852
Score = 150 bits (378), Expect = 8e-34
Identities = 119/301 (39%), Positives = 150/301 (49%), Gaps = 57/301 (18%)
Frame = +2
Query: 134 MSLALSWQSPSTTSLDSFPSCFPRFHGVHLQISRHGLSISFRKYDFCVAHNAISSGSAPE 313
M+L S Q T+ L+S S +FHG H + R+ SI F+K F I+S PE
Sbjct: 1 MTLVPSRQLYPTSLLESSLS---KFHGTHFHLFRYS-SIPFKKQSFHATQYFITSSLTPE 56
Query: 314 KYPPGNSSFV---FKTTRT-----------DSTK-------------------------- 373
+ PP + + +K T+ DS K
Sbjct: 57 QNPPRKLNLLICQYKPTKNLSSCSWIDRWNDSRKQHGPRRPRAVLDYQSNESGNLSSDGN 116
Query: 374 -----MEKIVEKLKRFGYAEE-----ASETKERVPGRKSLEHIFYAEEEGNSRNSQGRFS 523
M+KIVEKLK+FGY E E +ERV + S+E IFY EE G NS+G FS
Sbjct: 117 DGGSTMDKIVEKLKKFGYIAEDKNEGRGEVRERVIEKGSVEDIFYVEE-GMLPNSRGGFS 175
Query: 524 IESPLEVGNDLVTDG--EVRVPLEK-----EEEGRNLARWRNRTSLAXXXXXXXXXXXXX 682
SPL D+ DG EVR P EK +EEG ++ R R+RTSLA
Sbjct: 176 GVSPLGT-EDVFGDGGGEVRFPWEKPREREKEEGGSIRR-RSRTSLAELTLPESELRRLR 233
Query: 683 XXXXXXDESLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGG 862
KIG +GVTQA+V+MIHE+WKT E+VRLK +G ALNMKRMHEILE+KTGG
Sbjct: 234 NLTFQKKHKTKIGGAGVTQAVVEMIHERWKTAEIVRLKIEGPPALNMKRMHEILERKTGG 293
Query: 863 L 865
L
Sbjct: 294 L 294
>ref|XP_002315729.1| hypothetical protein POPTR_0010s08770g [Populus trichocarpa]
gi|222864769|gb|EEF01900.1| hypothetical protein
POPTR_0010s08770g [Populus trichocarpa]
Length = 894
Score = 149 bits (376), Expect = 1e-33
Identities = 103/273 (37%), Positives = 139/273 (50%), Gaps = 43/273 (15%)
Frame = +2
Query: 176 LDSFPSCFPRFHGVHLQISRHGLSISFRKYD-FCVAHNAISSGSAPEKYPPGNSS----- 337
+DSF S F +FHG LQ R+ S R + + + + + +P S
Sbjct: 11 IDSFQSSFSKFHGTPLQFFRYSSSFPLRSHSGYACSITDKNPSTKSTSFPTDKSKTLNLS 70
Query: 338 ------------------------FVFKTTRTDST----KMEKIVEKLKRFGYAE-EASE 430
F +++ ++S+ MEKIVEKLK+ GY + + +E
Sbjct: 71 TGSSWFFNWNKPNKQNLPRTPQAVFDYRSNNSNSSGSGSTMEKIVEKLKKHGYMDGDVNE 130
Query: 431 TKERVPGRK----SLEHIFYAEEEGNSRNSQGRFSIESPLEVGNDLVTDGEVRVPLEK-- 592
KER+ R S+E IFY EE G N++G FS ESPL V + +DGEVR P EK
Sbjct: 131 NKERMQERVIEKGSVEDIFYVEE-GMLPNARGGFSKESPLGVEDVFRSDGEVRFPWEKPK 189
Query: 593 --EEEGRNLARWRNRTSLAXXXXXXXXXXXXXXXXXXXDESLKIGSSGVTQAIVDMIHEK 766
E+EG+ AR ++RTSLA ++G GVTQ +VD IH+K
Sbjct: 190 KEEDEGKWTARSKSRTSLAELTLPESELRRLRNLTYGTKSKTRVGGRGVTQEVVDAIHDK 249
Query: 767 WKTLEVVRLKCDGAHALNMKRMHEILEKKTGGL 865
WKT E+ R+K +GA ALNMKRMHEILE KTGGL
Sbjct: 250 WKTSEIARVKVEGAPALNMKRMHEILENKTGGL 282
>gb|EXB29861.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
notabilis]
Length = 878
Score = 142 bits (358), Expect = 2e-31
Identities = 113/302 (37%), Positives = 149/302 (49%), Gaps = 77/302 (25%)
Frame = +2
Query: 191 SCFPRFHGVHLQISRHGLSISFRKYD-FCVAHNAISSGSAPE------------------ 313
S F HG H++ R+G SI+FRK+ + +++++S S+ E
Sbjct: 13 SFFDSLHGTHIKFFRYGSSITFRKHRLYSTKYSSVNSSSSSEQNPGGKYNKFFRTTQNNN 72
Query: 314 ---KY-----------------------PPG--------------NSSFVFKT---TRTD 364
KY PPG SS+ + +
Sbjct: 73 WHNKYDDNLSSTSWIEKWNETHQQIRPKPPGAVLDYRNSESGNQPRSSYANRNGGDNNSG 132
Query: 365 STKMEKIVEKLKRFGYAEEA-SETKE----RVPGRKSLEHIFYAEEEGNSRNSQGRFSIE 529
+ ME+IVEKLK+FGY ++ SE KE RV + S+E IFY EE G N +G FS +
Sbjct: 133 GSTMERIVEKLKKFGYMDDVGSEGKEDKGERVIEKGSVEDIFYVEE-GMLPNPRGGFSPD 191
Query: 530 SPLEV-----GNDLVTDGEVRVPLEK-----EEEGRNLARWRNRTSLAXXXXXXXXXXXX 679
SPL V GN GEVR P EK E+EG ++ R R++TSLA
Sbjct: 192 SPLGVEGVFGGNG----GEVRFPWEKPKEKVEKEGGSMRR-RSKTSLAELTLPESELRRL 246
Query: 680 XXXXXXXDESLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTG 859
+IG +GVTQ +VDMIHE+WKTLE+VRLK +GA ALNMKRMHEILE+KTG
Sbjct: 247 RNLTFQKKHKTRIGGAGVTQEVVDMIHERWKTLEIVRLKIEGAPALNMKRMHEILERKTG 306
Query: 860 GL 865
GL
Sbjct: 307 GL 308
>ref|XP_004495335.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cicer arietinum]
Length = 838
Score = 140 bits (352), Expect = 8e-31
Identities = 86/177 (48%), Positives = 105/177 (59%), Gaps = 13/177 (7%)
Frame = +2
Query: 374 MEKIVEKLKRFGYAEEASE------TKERVPGRKSLEHIFYAEEEGNSRNSQGRFSIESP 535
M++IVEKLK+FGY ++ + TKERV + S+E IFY EE G N++G FS ESP
Sbjct: 111 MDRIVEKLKKFGYDDDDDDEKKDHNTKERVIEKGSVEDIFYVEE-GILPNTKGGFSSESP 169
Query: 536 LEVGNDLVTDGEVRVPLEK-------EEEGRNLARWRNRTSLAXXXXXXXXXXXXXXXXX 694
VG GEVR P EK EEE R R +++TSLA
Sbjct: 170 FGVGRFGSDGGEVRFPWEKKTVVDDEEEEDRKGLRKKSKTSLAELTLPESELKRLLKLTF 229
Query: 695 XXDESLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGL 865
+IG GVTQA+VD IHE+WKT E+VRLK +G ALNMKRMHEILE+KTGGL
Sbjct: 230 EKKHKTRIGGGGVTQAVVDKIHERWKTSEIVRLKFEGDAALNMKRMHEILERKTGGL 286
>ref|XP_007144072.1| hypothetical protein PHAVU_007G126200g [Phaseolus vulgaris]
gi|561017262|gb|ESW16066.1| hypothetical protein
PHAVU_007G126200g [Phaseolus vulgaris]
Length = 827
Score = 138 bits (348), Expect = 2e-30
Identities = 81/170 (47%), Positives = 102/170 (60%), Gaps = 4/170 (2%)
Frame = +2
Query: 368 TKMEKIVEKLKRFGYAEEASETKERVPGRKSLEHIFYAEEEGNSRNSQGRFSIESPLEVG 547
+ M +IVEKLK+ GYA + E K++V + S+E IFY E G N++G FS ESPL G
Sbjct: 105 SNMNRIVEKLKKIGYAGDGIENKQKVIEKGSVEDIFYVGE-GMLPNARGGFSPESPLGFG 163
Query: 548 NDLVTDGEVRVPLEKEE----EGRNLARWRNRTSLAXXXXXXXXXXXXXXXXXXXDESLK 715
DGE R P EK E E R R++TS+A +
Sbjct: 164 RFGSDDGEARFPWEKPEAEELEESKAIRKRSKTSVAELTLPESELKRLLRLTFEKKHKTR 223
Query: 716 IGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGL 865
IG SGVTQA+VD IHE+WKT+E+VRLK +G ALNM+RMHEILE+KTGGL
Sbjct: 224 IGRSGVTQAVVDKIHERWKTVEIVRLKFEGEAALNMRRMHEILERKTGGL 273
>ref|XP_002517017.1| conserved hypothetical protein [Ricinus communis]
gi|223543652|gb|EEF45180.1| conserved hypothetical
protein [Ricinus communis]
Length = 773
Score = 136 bits (342), Expect = 1e-29
Identities = 82/176 (46%), Positives = 107/176 (60%), Gaps = 12/176 (6%)
Frame = +2
Query: 374 MEKIVEKLKRFGYAE------EASETKERVPGRKSLEHIFYAEEEGNSRNSQGRFSIESP 535
MEKIVEKLK+ GY + + +T ERV + S+E IFY EE GN NS+G FS ESP
Sbjct: 1 MEKIVEKLKKHGYIDGNVDEKKKEKTLERVIQKGSVEDIFYVEE-GNLPNSRGGFSKESP 59
Query: 536 LEVGNDLVTDGEVRVPLEK------EEEGRNLARWRNRTSLAXXXXXXXXXXXXXXXXXX 697
L V + ++GEVR P EK E E + AR ++RT LA
Sbjct: 60 LGVEDVFKSNGEVRFPWEKPKREELEHEKKWTARSKSRTQLAELTLPESELRRLRNLTYQ 119
Query: 698 XDESLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGL 865
+++ +GVTQ +VD IH++WKT E+VR+K +GA ALNM+RMHEILE+KTGGL
Sbjct: 120 IKSKVRVKGAGVTQEVVDSIHDRWKTSEIVRVKVEGAPALNMRRMHEILERKTGGL 175
>ref|XP_003590782.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Medicago
truncatula] gi|355479830|gb|AES61033.1| Chloroplastic
group IIA intron splicing facilitator CRS1 [Medicago
truncatula]
Length = 838
Score = 134 bits (337), Expect = 4e-29
Identities = 83/174 (47%), Positives = 106/174 (60%), Gaps = 8/174 (4%)
Frame = +2
Query: 368 TKMEKIVEKLKRFGYAEEASET--KERVPGRKSLEHIFYAEEEGNSRNSQGRFSIESPLE 541
++M++IVEKLK+FGY + +E +E V + S+E IFY EE G N++G FS ESP
Sbjct: 109 SRMDRIVEKLKKFGYESDENENIKEEGVIEKGSMEDIFYVEE-GMLPNTRGGFSPESPFG 167
Query: 542 VGNDLVTDG-EVRVPLEK-----EEEGRNLARWRNRTSLAXXXXXXXXXXXXXXXXXXXD 703
+G+ DG EVR P EK E E R +R +++TS+A
Sbjct: 168 IGSYGSGDGGEVRFPWEKPVVDEEVEERTSSRKKSKTSMAELTLPESELRRLLKLTFMKK 227
Query: 704 ESLKIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGL 865
+IG GVTQA VD IHE+WKT E+VRLK +G ALNMKRMHEILEKKTGGL
Sbjct: 228 HKTRIGGGGVTQAAVDKIHERWKTSEIVRLKFEGDAALNMKRMHEILEKKTGGL 281
>ref|XP_006352117.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Solanum tuberosum]
Length = 883
Score = 132 bits (332), Expect = 2e-28
Identities = 83/171 (48%), Positives = 105/171 (61%), Gaps = 7/171 (4%)
Frame = +2
Query: 374 MEKIVEKLKRFGYAEEASETKE---RVPGRKSLEHIFYAEEEGNSRNSQGRFSIESPLEV 544
M++IVEKLK+FGYA+EA+E ++ RV + S+E IF+ EE G N +G FS ESP
Sbjct: 154 MDRIVEKLKKFGYADEATEKEKKEKRVVEKGSIEDIFFVEE-GILPNVRGGFSEESPFGD 212
Query: 545 GNDLVTDGEVRVPLE----KEEEGRNLARWRNRTSLAXXXXXXXXXXXXXXXXXXXDESL 712
N + DG VR P E K+EE ++A R+RT LA
Sbjct: 213 ENVIAKDGVVRFPWERPLVKKEESNSMAS-RSRTHLAELTLPASELRRLTNLALRIKNKS 271
Query: 713 KIGSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGL 865
+I +GVTQ +V+ I EKWKT EVVRLK +GA ALNMKRMHEILE+KTGGL
Sbjct: 272 RITGAGVTQQVVETIREKWKTSEVVRLKVEGAPALNMKRMHEILERKTGGL 322
>ref|XP_004134094.1| PREDICTED: chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
gi|449504099|ref|XP_004162252.1| PREDICTED:
chloroplastic group IIA intron splicing facilitator
CRS1, chloroplastic-like [Cucumis sativus]
Length = 874
Score = 132 bits (331), Expect = 2e-28
Identities = 81/169 (47%), Positives = 101/169 (59%), Gaps = 5/169 (2%)
Frame = +2
Query: 374 MEKIVEKLKRFGYAEEASETK--ERVPGRKSLEHIFYAEEEGNSRNSQGRFSIESPLEVG 547
MEKIV KLK+FGY ++ ++ K ER + S+E I Y EE G N++G FS ESP+
Sbjct: 140 MEKIVRKLKKFGYIDDENKEKGEERAIEKGSVEDILYIEE-GMLPNTRGGFSKESPMGDE 198
Query: 548 NDLVTDGEVRVPLEKEEEGRNL---ARWRNRTSLAXXXXXXXXXXXXXXXXXXXDESLKI 718
N +DGEVR P EK +E + + R SLA +KI
Sbjct: 199 NMFGSDGEVRFPWEKPKEKEDTHGDSTRRGSASLAQLTLPEPELRRLRNLTFQKRHKMKI 258
Query: 719 GSSGVTQAIVDMIHEKWKTLEVVRLKCDGAHALNMKRMHEILEKKTGGL 865
G GVTQA+VD+IHEKWK+ E+VRLK G ALNMKRMHEILE+KTGGL
Sbjct: 259 GGGGVTQAVVDVIHEKWKSSEIVRLKILGPPALNMKRMHEILERKTGGL 307