BLASTX nr result

ID: Sinomenium22_contig00010476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00010476
         (325 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                                57   2e-06
gb|EXB94379.1| E3 ubiquitin-protein ligase UPL6 [Morus notabilis]      56   6e-06

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 30/62 (48%), Positives = 38/62 (61%)
 Frame = +2

Query: 38   IKKQHVN*LSVAEM*MLRWKCG*VLKIKVELCIFEKMVGVPLIGDKIRENQLRWSKQLQQ 217
            +K QHV+ + VAEM MLRW CG   K K+        VGV  I  K+RENQLRW   +Q+
Sbjct: 863  VKHQHVHKMGVAEMRMLRWMCGHTRKDKIRNEDIRGKVGVAEIQGKMRENQLRWFGHVQR 922

Query: 218  KP 223
            +P
Sbjct: 923  RP 924


>gb|EXB94379.1| E3 ubiquitin-protein ligase UPL6 [Morus notabilis]
          Length = 1413

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/62 (43%), Positives = 40/62 (64%)
 Frame = +2

Query: 38   IKKQHVN*LSVAEM*MLRWKCG*VLKIKVELCIFEKMVGVPLIGDKIRENQLRWSKQLQQ 217
            IK+QH++ +SVAEM MLRW  G     +++  +    VGV  I DK+RE +LRW   +Q+
Sbjct: 976  IKRQHISKMSVAEMRMLRWMSGQTRMDRIKNEVIRSKVGVAPIEDKVREGRLRWFGHVQR 1035

Query: 218  KP 223
            +P
Sbjct: 1036 RP 1037


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