BLASTX nr result
ID: Sinomenium22_contig00010273
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00010273
(641 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN66875.1| hypothetical protein VITISV_009275 [Vitis vinifera] 118 4e-36
dbj|BAD66815.1| orf174 [Beta vulgaris subsp. vulgaris] 124 2e-35
ref|NP_063976.1| orf114a gene product (mitochondrion) [Beta vulg... 119 1e-28
gb|AFK46433.1| unknown [Lotus japonicus] 84 3e-14
tpg|DAA43628.1| TPA: hypothetical protein ZEAMMB73_498562 [Zea m... 52 1e-09
gb|EPS74526.1| hypothetical protein M569_00243, partial [Genlise... 52 1e-08
ref|YP_008992308.1| hypothetical protein Salmi_Mp043 (mitochondr... 59 2e-06
gb|AGV55569.1| hypothetical protein (chloroplast) [Arbutus unedo... 59 2e-06
gb|ABV02394.1| hypothetical chloroplast RF15 [Ipomoea purpurea] ... 59 2e-06
ref|YP_007624842.1| Ycf15 protein (chloroplast) [Artemisia frigi... 58 3e-06
ref|YP_004564419.1| hypothetical chloroplast RF15 (chloroplast) ... 58 3e-06
tpg|DAA54955.1| TPA: hypothetical protein ZEAMMB73_762850 [Zea m... 55 4e-06
ref|NP_063977.1| orf146 gene product (mitochondrion) [Beta vulga... 56 8e-06
ref|YP_004842111.1| hypothetical protein BemaM_p066 [Beta macroc... 56 8e-06
>emb|CAN66875.1| hypothetical protein VITISV_009275 [Vitis vinifera]
Length = 142
Score = 118 bits (295), Expect(2) = 4e-36
Identities = 60/71 (84%), Positives = 62/71 (87%)
Frame = +2
Query: 38 TDANSSSRKK*LTEPGSLTNTNIIAKNCLFYIFSPVPLLPRALRNRSDHIDIPSTQHRSS 217
T ANSSSRKK LTEPGSLTNTNII KNCLF I SPVPLLPRALRNRSDHIDIPSTQHRSS
Sbjct: 29 TGANSSSRKKGLTEPGSLTNTNIIEKNCLFCILSPVPLLPRALRNRSDHIDIPSTQHRSS 88
Query: 218 KGSRTTHQSTK 250
KGSR ++ K
Sbjct: 89 KGSRRPTKARK 99
Score = 60.1 bits (144), Expect(2) = 4e-36
Identities = 29/41 (70%), Positives = 29/41 (70%)
Frame = +1
Query: 253 SFRKWIPIRRVHNRMDKLTLTRXXXXXXXXXXXXYREGIGM 375
SFRKWIPIRRVHNRMDKLTLTR YREGIGM
Sbjct: 102 SFRKWIPIRRVHNRMDKLTLTRQFGIHFGIFLGRYREGIGM 142
>dbj|BAD66815.1| orf174 [Beta vulgaris subsp. vulgaris]
Length = 174
Score = 124 bits (311), Expect(2) = 2e-35
Identities = 67/89 (75%), Positives = 70/89 (78%), Gaps = 6/89 (6%)
Frame = +2
Query: 2 PLSPRSTEKKCRTDANSSSRKK*LTEPGSLTNTN------IIAKNCLFYIFSPVPLLPRA 163
P SPRSTE KCR ANSSSRKK LTEPGSLTNTN II KNCLF I SPV LLPRA
Sbjct: 42 PPSPRSTETKCRAGANSSSRKKGLTEPGSLTNTNLIENTNIIEKNCLFCILSPVLLLPRA 101
Query: 164 LRNRSDHIDIPSTQHRSSKGSRTTHQSTK 250
LRNRS+HIDIPSTQHRSSKGSR ++ K
Sbjct: 102 LRNRSEHIDIPSTQHRSSKGSRRPTKARK 130
Score = 51.2 bits (121), Expect(2) = 2e-35
Identities = 27/42 (64%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Frame = +1
Query: 253 SFRKWIPIRRVHNRMDKLTLTR-XXXXXXXXXXXXYREGIGM 375
S RKWIPIRRVHNRMDKLTLTR YR+GIGM
Sbjct: 133 SVRKWIPIRRVHNRMDKLTLTRQFGMIQFGIFLGRYRKGIGM 174
>ref|NP_063976.1| orf114a gene product (mitochondrion) [Beta vulgaris subsp.
vulgaris] gi|323435087|ref|YP_004222305.1| hypothetical
protein BevumaM_p070 [Beta vulgaris subsp. maritima]
gi|346683178|ref|YP_004842110.1| hypothetical protein
BemaM_p065 [Beta macrocarpa] gi|9049278|dbj|BAA99288.1|
orf114a [Beta vulgaris subsp. vulgaris]
gi|317905640|emb|CBJ14041.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|319439820|emb|CBJ17532.1|
hypothetical protein [Beta vulgaris subsp. maritima]
gi|345500096|emb|CBX24914.1| hypothetical protein [Beta
macrocarpa] gi|384977899|emb|CBL54123.1| hypothetical
protein (mitochondrion) [Beta vulgaris subsp. maritima]
Length = 114
Score = 119 bits (299), Expect(2) = 1e-28
Identities = 64/83 (77%), Positives = 67/83 (80%), Gaps = 6/83 (7%)
Frame = -3
Query: 231 VRDPFDDLCCVEGISI*SDRLRKARGSNGTGENI*KRQFFAIILVF------VSDPGSVS 70
+RDPFDDLCCVEGISI SDRLRKARGS TGE+I KRQFF+IILVF VSDPGSVS
Sbjct: 24 LRDPFDDLCCVEGISICSDRLRKARGSKRTGESIQKRQFFSIILVFSIRLVLVSDPGSVS 83
Query: 69 HFFRDELLASVLHFFSVDRGERG 1
FFRDELLA HF SVDRGE G
Sbjct: 84 PFFRDELLAPARHFVSVDRGEGG 106
Score = 33.1 bits (74), Expect(2) = 1e-28
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -1
Query: 296 MRLCTLRIGIHFLKD 252
MRLCTLRIGIHFL D
Sbjct: 1 MRLCTLRIGIHFLTD 15
>gb|AFK46433.1| unknown [Lotus japonicus]
Length = 66
Score = 84.3 bits (207), Expect = 3e-14
Identities = 45/66 (68%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Frame = -3
Query: 288 MHSSNRNPFSERSFVLWWVVRD-PFDDLCCVEGISI*SDRLRKARGSNGTGENI*KRQFF 112
MH SNRNPFSERS + + FDDLCCVEGISI SDRLRKARGSNGTGE+I KRQF+
Sbjct: 1 MHPSNRNPFSERSRLSCFGGSSRSFDDLCCVEGISIRSDRLRKARGSNGTGESIQKRQFY 60
Query: 111 AIILVF 94
I + +
Sbjct: 61 FISICY 66
>tpg|DAA43628.1| TPA: hypothetical protein ZEAMMB73_498562 [Zea mays]
Length = 120
Score = 51.6 bits (122), Expect(2) = 1e-09
Identities = 24/40 (60%), Positives = 27/40 (67%)
Frame = -1
Query: 506 SDFFFDQKYYVKSSVFFLFLYPYPIGTAFESIENLFFCMN 387
S +FF Y+ F LFLYPYP+GTAF SIEN F CMN
Sbjct: 58 STYFFGFILYLFHFDFSLFLYPYPLGTAFASIENFFLCMN 97
Score = 37.4 bits (85), Expect(2) = 1e-09
Identities = 16/21 (76%), Positives = 18/21 (85%)
Frame = -3
Query: 375 HSNSFPIPPKENPELDPKLTG 313
+SN FP PK+NPELDPKLTG
Sbjct: 100 YSNFFPKLPKKNPELDPKLTG 120
>gb|EPS74526.1| hypothetical protein M569_00243, partial [Genlisea aurea]
Length = 66
Score = 51.6 bits (122), Expect(2) = 1e-08
Identities = 27/41 (65%), Positives = 27/41 (65%)
Frame = +1
Query: 253 SFRKWIPIRRVHNRMDKLTLTRXXXXXXXXXXXXYREGIGM 375
SFRK IPIRRVHN MDKLTLTR YREGIGM
Sbjct: 25 SFRKRIPIRRVHNCMDKLTLTRQFGIKFDIFLGRYREGIGM 65
Score = 33.9 bits (76), Expect(2) = 1e-08
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +2
Query: 185 IDIPSTQHRSSKGSR 229
IDIPSTQHRSSKGSR
Sbjct: 1 IDIPSTQHRSSKGSR 15
>ref|YP_008992308.1| hypothetical protein Salmi_Mp043 (mitochondrion) [Salvia
miltiorrhiza] gi|534292282|gb|AGU16574.1| hypothetical
protein Salmi_Mp043 (mitochondrion) [Salvia
miltiorrhiza]
Length = 116
Score = 58.5 bits (140), Expect = 2e-06
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +2
Query: 2 PLSPRSTEKKCRTDANSSSRKK*LTEPGSLTNTNII 109
P SPR TE KCRT ANSSSRKK LT+PGSLTN N+I
Sbjct: 81 PFSPRPTETKCRTGANSSSRKKGLTKPGSLTNLNLI 116
>gb|AGV55569.1| hypothetical protein (chloroplast) [Arbutus unedo]
gi|543383047|gb|AGV55582.1| hypothetical protein
(chloroplast) [Arbutus unedo]
Length = 63
Score = 58.5 bits (140), Expect = 2e-06
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +3
Query: 3 PFLLGPQRKNVGLMPTVHHGRNDLLSRDH 89
PF LGPQR+NVGLMPTVHHGR D LSRDH
Sbjct: 35 PFFLGPQRQNVGLMPTVHHGRKDSLSRDH 63
>gb|ABV02394.1| hypothetical chloroplast RF15 [Ipomoea purpurea]
gi|157056820|gb|ABV02410.1| hypothetical chloroplast
RF15 [Ipomoea purpurea]
Length = 56
Score = 58.5 bits (140), Expect = 2e-06
Identities = 25/29 (86%), Positives = 27/29 (93%)
Frame = +3
Query: 3 PFLLGPQRKNVGLMPTVHHGRNDLLSRDH 89
PFLLGPQR+NVGL+PTVHHGR D LSRDH
Sbjct: 28 PFLLGPQRQNVGLVPTVHHGRKDSLSRDH 56
>ref|YP_007624842.1| Ycf15 protein (chloroplast) [Artemisia frigida]
gi|470227769|ref|YP_007624855.1| Ycf15 protein
(chloroplast) [Artemisia frigida]
gi|401712244|gb|AFP98869.1| Ycf15 protein (chloroplast)
[Artemisia frigida] gi|401712257|gb|AFP98882.1| Ycf15
protein (chloroplast) [Artemisia frigida]
Length = 63
Score = 57.8 bits (138), Expect = 3e-06
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +3
Query: 3 PFLLGPQRKNVGLMPTVHHGRNDLLSRDH 89
PFLLGPQR+NVGL PTVHHGR D LSRDH
Sbjct: 35 PFLLGPQRQNVGLAPTVHHGRKDSLSRDH 63
>ref|YP_004564419.1| hypothetical chloroplast RF15 (chloroplast) [Ageratina adenophora]
gi|334701863|ref|YP_004564431.1| hypothetical
chloroplast RF15 (chloroplast) [Ageratina adenophora]
gi|334089722|gb|AEG64605.1| hypothetical chloroplast
RF15 (chloroplast) [Ageratina adenophora]
gi|334089734|gb|AEG64617.1| hypothetical chloroplast
RF15 (chloroplast) [Ageratina adenophora]
Length = 63
Score = 57.8 bits (138), Expect = 3e-06
Identities = 25/29 (86%), Positives = 26/29 (89%)
Frame = +3
Query: 3 PFLLGPQRKNVGLMPTVHHGRNDLLSRDH 89
PFLLGPQR+NVGL PTVHHGR D LSRDH
Sbjct: 35 PFLLGPQRQNVGLTPTVHHGRKDSLSRDH 63
>tpg|DAA54955.1| TPA: hypothetical protein ZEAMMB73_762850 [Zea mays]
Length = 92
Score = 55.5 bits (132), Expect(2) = 4e-06
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = -1
Query: 215 MTYVVLKGYLYDPIDCVRPAVATEPGKIYRK 123
MTYVVLKGYLYDPIDC+RPAVA E GK K
Sbjct: 1 MTYVVLKGYLYDPIDCIRPAVAIERGKYTEK 31
Score = 21.9 bits (45), Expect(2) = 4e-06
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = -2
Query: 142 RGKYIEKTVL 113
RGKY EKTVL
Sbjct: 25 RGKYTEKTVL 34
>ref|NP_063977.1| orf146 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
gi|323435088|ref|YP_004222306.1| hypothetical protein
BevumaM_p071 [Beta vulgaris subsp. maritima]
gi|9049279|dbj|BAA99289.1| orf146 [Beta vulgaris subsp.
vulgaris] gi|317905641|emb|CBJ14042.1| hypothetical
protein [Beta vulgaris subsp. maritima]
gi|319439821|emb|CBJ17533.1| hypothetical protein [Beta
vulgaris subsp. maritima] gi|384977900|emb|CBL54124.1|
hypothetical protein (mitochondrion) [Beta vulgaris
subsp. maritima]
Length = 146
Score = 56.2 bits (134), Expect = 8e-06
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = +3
Query: 3 PFLLGPQRKNVGLMPTVHHGRNDLLSRDH 89
P LLGPQR+NVGL+PTVHHGR D LSRDH
Sbjct: 118 PLLLGPQRQNVGLVPTVHHGRRDSLSRDH 146
>ref|YP_004842111.1| hypothetical protein BemaM_p066 [Beta macrocarpa]
gi|345500097|emb|CBX24915.1| hypothetical protein [Beta
macrocarpa]
Length = 146
Score = 56.2 bits (134), Expect = 8e-06
Identities = 24/29 (82%), Positives = 26/29 (89%)
Frame = +3
Query: 3 PFLLGPQRKNVGLMPTVHHGRNDLLSRDH 89
P LLGPQR+NVGL+PTVHHGR D LSRDH
Sbjct: 118 PLLLGPQRQNVGLVPTVHHGRRDSLSRDH 146