BLASTX nr result
ID: Sinomenium22_contig00010230
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00010230
(352 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prun... 219 3e-55
ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-lik... 219 3e-55
emb|CBI26421.3| unnamed protein product [Vitis vinifera] 219 3e-55
ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutr... 218 7e-55
ref|XP_006302143.1| hypothetical protein CARUB_v10020145mg [Caps... 218 7e-55
ref|XP_002886771.1| RNA polymerase sigma subunit 1 [Arabidopsis ... 218 7e-55
emb|CAA75859.1| Sig1 [Sinapis alba] 218 7e-55
ref|XP_006371210.1| hypothetical protein POPTR_0019s06020g [Popu... 217 1e-54
ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-... 217 1e-54
ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protei... 217 1e-54
ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Popu... 216 2e-54
gb|EYU44877.1| hypothetical protein MIMGU_mgv1a004509mg [Mimulus... 216 3e-54
ref|NP_176666.1| RNA polymerase sigma subunit 1 [Arabidopsis tha... 216 3e-54
ref|XP_007029767.1| Sigma factor A isoform 2 [Theobroma cacao] g... 216 3e-54
ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao] g... 216 3e-54
gb|AAB81958.1| RNA polymerase sigma subunit 1 [Arabidopsis thali... 216 3e-54
dbj|BAA22214.1| plastid RNA polymerase sigma-subunit [Arabidopsi... 216 3e-54
ref|NP_001185314.1| RNA polymerase sigma subunit 1 [Arabidopsis ... 216 3e-54
emb|CAA74896.1| sigma factorB [Arabidopsis thaliana] 216 3e-54
gb|AAG40388.1|AF325036_1 At1g64860 [Arabidopsis thaliana] 216 3e-54
>ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prunus persica]
gi|462415485|gb|EMJ20222.1| hypothetical protein
PRUPE_ppa004393mg [Prunus persica]
Length = 512
Score = 219 bits (558), Expect = 3e-55
Identities = 110/117 (94%), Positives = 113/117 (96%)
Frame = -1
Query: 352 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLQEK 173
RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERL LIRNAKIRL+EK
Sbjct: 308 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIRLEEK 367
Query: 172 GITPSIARIAESLNMSQKKVTNATEAISKVFSLDREAFPSLNGLPGETLHSYIADNR 2
GITPSI RIAESLNMS+KKV NATEAISKVFSLDR+AFPSLNGLPGET HSYIADNR
Sbjct: 368 GITPSIDRIAESLNMSKKKVRNATEAISKVFSLDRDAFPSLNGLPGETHHSYIADNR 424
>ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-like isoform 2 [Vitis
vinifera]
Length = 497
Score = 219 bits (558), Expect = 3e-55
Identities = 111/117 (94%), Positives = 113/117 (96%)
Frame = -1
Query: 352 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLQEK 173
RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP+HLHERLSLIRNAKIRL+EK
Sbjct: 293 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRNAKIRLEEK 352
Query: 172 GITPSIARIAESLNMSQKKVTNATEAISKVFSLDREAFPSLNGLPGETLHSYIADNR 2
GITPSI RIAE LNMSQKKV NATEAISKVFSLDREAFPSLNGLPGETLHSYIAD R
Sbjct: 353 GITPSIDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIADVR 409
>emb|CBI26421.3| unnamed protein product [Vitis vinifera]
Length = 555
Score = 219 bits (558), Expect = 3e-55
Identities = 111/117 (94%), Positives = 113/117 (96%)
Frame = -1
Query: 352 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLQEK 173
RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLP+HLHERLSLIRNAKIRL+EK
Sbjct: 351 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRNAKIRLEEK 410
Query: 172 GITPSIARIAESLNMSQKKVTNATEAISKVFSLDREAFPSLNGLPGETLHSYIADNR 2
GITPSI RIAE LNMSQKKV NATEAISKVFSLDREAFPSLNGLPGETLHSYIAD R
Sbjct: 411 GITPSIDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIADVR 467
>ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutrema salsugineum]
gi|557097090|gb|ESQ37598.1| hypothetical protein
EUTSA_v10002486mg [Eutrema salsugineum]
Length = 519
Score = 218 bits (555), Expect = 7e-55
Identities = 107/117 (91%), Positives = 113/117 (96%)
Frame = -1
Query: 352 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLQEK 173
RGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERL LIRNAK+RLQEK
Sbjct: 315 RGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEK 374
Query: 172 GITPSIARIAESLNMSQKKVTNATEAISKVFSLDREAFPSLNGLPGETLHSYIADNR 2
GITPSI RIAESLNMSQKKV NATEA+SK+FSLDR+AFPSLNGLPGET HSYIADNR
Sbjct: 375 GITPSIDRIAESLNMSQKKVRNATEAVSKIFSLDRDAFPSLNGLPGETHHSYIADNR 431
>ref|XP_006302143.1| hypothetical protein CARUB_v10020145mg [Capsella rubella]
gi|482570853|gb|EOA35041.1| hypothetical protein
CARUB_v10020145mg [Capsella rubella]
Length = 521
Score = 218 bits (555), Expect = 7e-55
Identities = 107/117 (91%), Positives = 113/117 (96%)
Frame = -1
Query: 352 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLQEK 173
RGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERL LIRNAK+RLQEK
Sbjct: 317 RGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEK 376
Query: 172 GITPSIARIAESLNMSQKKVTNATEAISKVFSLDREAFPSLNGLPGETLHSYIADNR 2
GITPSI RIAESLNMSQKKV NATEA+SK+FSLDR+AFPSLNGLPGET HSYIADNR
Sbjct: 377 GITPSIDRIAESLNMSQKKVRNATEAVSKIFSLDRDAFPSLNGLPGETHHSYIADNR 433
>ref|XP_002886771.1| RNA polymerase sigma subunit 1 [Arabidopsis lyrata subsp. lyrata]
gi|297332612|gb|EFH63030.1| RNA polymerase sigma subunit
1 [Arabidopsis lyrata subsp. lyrata]
Length = 503
Score = 218 bits (555), Expect = 7e-55
Identities = 107/117 (91%), Positives = 113/117 (96%)
Frame = -1
Query: 352 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLQEK 173
RGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERL LIRNAK+RLQEK
Sbjct: 299 RGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEK 358
Query: 172 GITPSIARIAESLNMSQKKVTNATEAISKVFSLDREAFPSLNGLPGETLHSYIADNR 2
GITPSI RIAESLNMSQKKV NATEA+SK+FSLDR+AFPSLNGLPGET HSYIADNR
Sbjct: 359 GITPSIDRIAESLNMSQKKVRNATEAVSKIFSLDRDAFPSLNGLPGETHHSYIADNR 415
>emb|CAA75859.1| Sig1 [Sinapis alba]
Length = 481
Score = 218 bits (555), Expect = 7e-55
Identities = 107/117 (91%), Positives = 113/117 (96%)
Frame = -1
Query: 352 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLQEK 173
RGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERL LIRNAK+RLQEK
Sbjct: 277 RGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEK 336
Query: 172 GITPSIARIAESLNMSQKKVTNATEAISKVFSLDREAFPSLNGLPGETLHSYIADNR 2
GITPSI RIAESLNMSQKKV NATEA+SK+FSLDR+AFPSLNGLPGET HSYIADNR
Sbjct: 337 GITPSIDRIAESLNMSQKKVRNATEAVSKIFSLDRDAFPSLNGLPGETHHSYIADNR 393
>ref|XP_006371210.1| hypothetical protein POPTR_0019s06020g [Populus trichocarpa]
gi|550316904|gb|ERP49007.1| hypothetical protein
POPTR_0019s06020g [Populus trichocarpa]
Length = 451
Score = 217 bits (553), Expect = 1e-54
Identities = 108/117 (92%), Positives = 112/117 (95%)
Frame = -1
Query: 352 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLQEK 173
RGIEKFDSSKGFKISTYVYWWIRQGVSRALV+NSRTLRLP HLHERL LIRNAKIRL+EK
Sbjct: 305 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNAKIRLEEK 364
Query: 172 GITPSIARIAESLNMSQKKVTNATEAISKVFSLDREAFPSLNGLPGETLHSYIADNR 2
G+TPSI RIAESLNMSQ+KV NATEAISKVFSLDREAFPSLNGLPGET HSYIADNR
Sbjct: 365 GVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNR 421
>ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-like [Cucumis sativus]
gi|449514942|ref|XP_004164521.1| PREDICTED: RNA
polymerase sigma factor sigA-like [Cucumis sativus]
Length = 508
Score = 217 bits (553), Expect = 1e-54
Identities = 108/116 (93%), Positives = 112/116 (96%)
Frame = -1
Query: 352 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLQEK 173
RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERL LIRNAK++LQEK
Sbjct: 304 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVKLQEK 363
Query: 172 GITPSIARIAESLNMSQKKVTNATEAISKVFSLDREAFPSLNGLPGETLHSYIADN 5
GITPS+ RIAESLNMS+KKV NATEAISKVFSLDREAFPSLNGLPGET HSYIADN
Sbjct: 364 GITPSLDRIAESLNMSKKKVQNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 419
>ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
gi|222862757|gb|EEF00264.1| RNA POLYMERASE SIGMA SUBUNIT
1 family protein [Populus trichocarpa]
Length = 509
Score = 217 bits (553), Expect = 1e-54
Identities = 108/117 (92%), Positives = 112/117 (95%)
Frame = -1
Query: 352 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLQEK 173
RGIEKFDSSKGFKISTYVYWWIRQGVSRALV+NSRTLRLP HLHERL LIRNAKIRL+EK
Sbjct: 305 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNAKIRLEEK 364
Query: 172 GITPSIARIAESLNMSQKKVTNATEAISKVFSLDREAFPSLNGLPGETLHSYIADNR 2
G+TPSI RIAESLNMSQ+KV NATEAISKVFSLDREAFPSLNGLPGET HSYIADNR
Sbjct: 365 GVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNR 421
>ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Populus trichocarpa]
gi|550325184|gb|EEE95160.2| hypothetical protein
POPTR_0013s07290g [Populus trichocarpa]
Length = 499
Score = 216 bits (551), Expect = 2e-54
Identities = 108/117 (92%), Positives = 111/117 (94%)
Frame = -1
Query: 352 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLQEK 173
RGIEKFDSSKGFKISTYVYWWIRQGVSRALVEN RTLRLP HLHERL LIRNAKIRL+EK
Sbjct: 295 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENPRTLRLPNHLHERLGLIRNAKIRLEEK 354
Query: 172 GITPSIARIAESLNMSQKKVTNATEAISKVFSLDREAFPSLNGLPGETLHSYIADNR 2
G+TPSI RIAESLNMSQ+KV NATEAISKVFSLDREAFPSLNGLPGET HSYIADNR
Sbjct: 355 GVTPSIDRIAESLNMSQRKVRNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNR 411
>gb|EYU44877.1| hypothetical protein MIMGU_mgv1a004509mg [Mimulus guttatus]
gi|604346415|gb|EYU44878.1| hypothetical protein
MIMGU_mgv1a004509mg [Mimulus guttatus]
Length = 520
Score = 216 bits (550), Expect = 3e-54
Identities = 107/116 (92%), Positives = 113/116 (97%)
Frame = -1
Query: 352 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLQEK 173
RGIEK+DSSKGFKISTYVYWWIRQGVS+ALVENSRTLRLPTHLHERLSLIRNAK RL+EK
Sbjct: 316 RGIEKYDSSKGFKISTYVYWWIRQGVSKALVENSRTLRLPTHLHERLSLIRNAKARLEEK 375
Query: 172 GITPSIARIAESLNMSQKKVTNATEAISKVFSLDREAFPSLNGLPGETLHSYIADN 5
GITPSI+RIAESLNMSQKKV NATEA SKVFSLDREAFPSLNG+PG+TLHSYIADN
Sbjct: 376 GITPSISRIAESLNMSQKKVRNATEANSKVFSLDREAFPSLNGIPGKTLHSYIADN 431
>ref|NP_176666.1| RNA polymerase sigma subunit 1 [Arabidopsis thaliana]
gi|75098242|sp|O24629.1|SIGA_ARATH RecName: Full=RNA
polymerase sigma factor sigA; Short=Sigma factor A;
Short=Sigma-A; AltName: Full=RNA polymerase sigma factor
sig1; Short=Atsig1; Short=Sigma factor 1; AltName:
Full=RNA polymerase sigma factor sig2; Short=Atsig2;
Short=Sigma factor 2; AltName: Full=RNA polymerase sigma
factor sigB; Short=Sigma factor B; Short=Sigma-B; Flags:
Precursor gi|5042421|gb|AAD38260.1|AC006193_16 RNA
polymerase sigma subunit 1 [Arabidopsis thaliana]
gi|2353171|gb|AAB69384.1| sigma factor 1 [Arabidopsis
thaliana] gi|2443408|dbj|BAA22421.1| SigA [Arabidopsis
thaliana] gi|2558514|emb|CAA74640.1| plastid RNA
polymerase sigma factor [Arabidopsis thaliana]
gi|5478439|dbj|BAA82448.1| sigma factor SigA
[Arabidopsis thaliana] gi|17064900|gb|AAL32604.1| RNA
polymerase sigma subunit 1 [Arabidopsis thaliana]
gi|20259916|gb|AAM13305.1| RNA polymerase sigma subunit
1 [Arabidopsis thaliana] gi|222423019|dbj|BAH19492.1|
AT1G64860 [Arabidopsis thaliana]
gi|332196177|gb|AEE34298.1| RNA polymerase sigma subunit
1 [Arabidopsis thaliana]
Length = 502
Score = 216 bits (550), Expect = 3e-54
Identities = 107/117 (91%), Positives = 112/117 (95%)
Frame = -1
Query: 352 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLQEK 173
RGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERL LIRNAK+RLQEK
Sbjct: 298 RGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEK 357
Query: 172 GITPSIARIAESLNMSQKKVTNATEAISKVFSLDREAFPSLNGLPGETLHSYIADNR 2
GITPSI RIAESLNMSQKKV NATEA+SKVFSLDR+AFPSLNGLPGET HSYIAD R
Sbjct: 358 GITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADTR 414
>ref|XP_007029767.1| Sigma factor A isoform 2 [Theobroma cacao]
gi|508718372|gb|EOY10269.1| Sigma factor A isoform 2
[Theobroma cacao]
Length = 450
Score = 216 bits (550), Expect = 3e-54
Identities = 107/116 (92%), Positives = 112/116 (96%)
Frame = -1
Query: 352 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLQEK 173
RGIEKFDSSKG+KISTYVYWWIRQGVSRALVENSRTLRLPTHLHERL LIRNAKIRL+EK
Sbjct: 304 RGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIRLEEK 363
Query: 172 GITPSIARIAESLNMSQKKVTNATEAISKVFSLDREAFPSLNGLPGETLHSYIADN 5
GITP+I RIAESLNMSQKKV NATEA+SKVFSLDR+AFPSLNGLPGET HSYIADN
Sbjct: 364 GITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADN 419
>ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao]
gi|508718371|gb|EOY10268.1| Sigma factor A isoform 1
[Theobroma cacao]
Length = 508
Score = 216 bits (550), Expect = 3e-54
Identities = 107/116 (92%), Positives = 112/116 (96%)
Frame = -1
Query: 352 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLQEK 173
RGIEKFDSSKG+KISTYVYWWIRQGVSRALVENSRTLRLPTHLHERL LIRNAKIRL+EK
Sbjct: 304 RGIEKFDSSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIRLEEK 363
Query: 172 GITPSIARIAESLNMSQKKVTNATEAISKVFSLDREAFPSLNGLPGETLHSYIADN 5
GITP+I RIAESLNMSQKKV NATEA+SKVFSLDR+AFPSLNGLPGET HSYIADN
Sbjct: 364 GITPTIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADN 419
>gb|AAB81958.1| RNA polymerase sigma subunit 1 [Arabidopsis thaliana]
Length = 502
Score = 216 bits (550), Expect = 3e-54
Identities = 107/117 (91%), Positives = 112/117 (95%)
Frame = -1
Query: 352 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLQEK 173
RGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERL LIRNAK+RLQEK
Sbjct: 298 RGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEK 357
Query: 172 GITPSIARIAESLNMSQKKVTNATEAISKVFSLDREAFPSLNGLPGETLHSYIADNR 2
GITPSI RIAESLNMSQKKV NATEA+SKVFSLDR+AFPSLNGLPGET HSYIAD R
Sbjct: 358 GITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADTR 414
>dbj|BAA22214.1| plastid RNA polymerase sigma-subunit [Arabidopsis thaliana]
Length = 502
Score = 216 bits (550), Expect = 3e-54
Identities = 107/117 (91%), Positives = 112/117 (95%)
Frame = -1
Query: 352 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLQEK 173
RGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERL LIRNAK+RLQEK
Sbjct: 298 RGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEK 357
Query: 172 GITPSIARIAESLNMSQKKVTNATEAISKVFSLDREAFPSLNGLPGETLHSYIADNR 2
GITPSI RIAESLNMSQKKV NATEA+SKVFSLDR+AFPSLNGLPGET HSYIAD R
Sbjct: 358 GITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADTR 414
>ref|NP_001185314.1| RNA polymerase sigma subunit 1 [Arabidopsis thaliana]
gi|332196178|gb|AEE34299.1| RNA polymerase sigma subunit
1 [Arabidopsis thaliana]
Length = 498
Score = 216 bits (550), Expect = 3e-54
Identities = 107/117 (91%), Positives = 112/117 (95%)
Frame = -1
Query: 352 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLQEK 173
RGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERL LIRNAK+RLQEK
Sbjct: 298 RGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEK 357
Query: 172 GITPSIARIAESLNMSQKKVTNATEAISKVFSLDREAFPSLNGLPGETLHSYIADNR 2
GITPSI RIAESLNMSQKKV NATEA+SKVFSLDR+AFPSLNGLPGET HSYIAD R
Sbjct: 358 GITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADTR 414
>emb|CAA74896.1| sigma factorB [Arabidopsis thaliana]
Length = 500
Score = 216 bits (550), Expect = 3e-54
Identities = 107/117 (91%), Positives = 112/117 (95%)
Frame = -1
Query: 352 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLQEK 173
RGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERL LIRNAK+RLQEK
Sbjct: 296 RGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEK 355
Query: 172 GITPSIARIAESLNMSQKKVTNATEAISKVFSLDREAFPSLNGLPGETLHSYIADNR 2
GITPSI RIAESLNMSQKKV NATEA+SKVFSLDR+AFPSLNGLPGET HSYIAD R
Sbjct: 356 GITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADTR 412
>gb|AAG40388.1|AF325036_1 At1g64860 [Arabidopsis thaliana]
Length = 502
Score = 216 bits (550), Expect = 3e-54
Identities = 107/117 (91%), Positives = 112/117 (95%)
Frame = -1
Query: 352 RGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLSLIRNAKIRLQEK 173
RGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERL LIRNAK+RLQEK
Sbjct: 298 RGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEK 357
Query: 172 GITPSIARIAESLNMSQKKVTNATEAISKVFSLDREAFPSLNGLPGETLHSYIADNR 2
GITPSI RIAESLNMSQKKV NATEA+SKVFSLDR+AFPSLNGLPGET HSYIAD R
Sbjct: 358 GITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETHHSYIADTR 414