BLASTX nr result
ID: Sinomenium22_contig00009994
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00009994
(1374 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana] 89 1e-22
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-... 89 5e-19
ref|XP_007207799.1| hypothetical protein PRUPE_ppa024472mg, part... 86 8e-19
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga... 67 2e-18
gb|AAT58873.1| hypothetical protein [Oryza sativa Japonica Group] 68 7e-18
gb|AAD24601.1| putative non-LTR retroelement reverse transcripta... 70 4e-17
gb|AAD24831.1| putative non-LTR retroelement reverse transcripta... 69 7e-17
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 69 9e-17
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga... 63 2e-16
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 68 2e-16
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677... 68 2e-16
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 71 4e-16
ref|XP_007210987.1| hypothetical protein PRUPE_ppa021345mg [Prun... 78 6e-16
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta... 76 7e-16
ref|XP_004296207.1| PREDICTED: uncharacterized protein LOC101297... 80 7e-16
ref|XP_004305827.1| PREDICTED: putative ribonuclease H protein A... 62 7e-16
ref|XP_007203344.1| hypothetical protein PRUPE_ppa020282mg [Prun... 67 2e-15
ref|XP_007203701.1| hypothetical protein PRUPE_ppa020995mg, part... 66 3e-15
gb|EEC66671.1| hypothetical protein OsI_32959 [Oryza sativa Indi... 64 5e-15
gb|AAD15377.1| putative non-LTR retroelement reverse transcripta... 72 6e-15
>gb|AAF69169.1|AC007915_21 F27F5.21 [Arabidopsis thaliana]
Length = 1023
Score = 88.6 bits (218), Expect(3) = 1e-22
Identities = 48/149 (32%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Frame = +1
Query: 184 LFPYYSFIFCRANRTQCRSLKTLLQEFCNGSG*LVYLSKSLL-FGSKVKKSRREELSSVL 360
LF S FC+AN+ QC + +L+++ SG ++ SKS + FG KV + E+ S L
Sbjct: 530 LFANDSLFFCKANKEQCGVILGILKQYEAVSGQMINFSKSSIQFGHKVGDDIKAEIKSAL 589
Query: 361 GIKEAAKLGNYLGSDIDFGSAKSKALSIVESKIKSSILGEN-------------DY*IHV 501
GI +G+YLG G +K++ S V ++++ I G + + V
Sbjct: 590 GIHSIGGMGSYLGLPESLGGSKTRIFSFVRDRLQTRINGWSAKFLSKGGKEVMIKSVVAV 649
Query: 502 IPNYLMSCFKFPKSVCKSIASPLSKFWWN 588
+P Y+MSCF+ PK++ + S ++KFWW+
Sbjct: 650 LPTYVMSCFRLPKTITSKLTSAVAKFWWS 678
Score = 35.0 bits (79), Expect(3) = 1e-22
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +3
Query: 3 SVSYRIILNGLVSSSISPSREFQQGEPLSP 92
+V YR++LNG I P R +QG+PLSP
Sbjct: 462 TVQYRVLLNGQPRGLIVPKRGLRQGDPLSP 491
Score = 31.2 bits (69), Expect(3) = 1e-22
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 89 PPLFILCNEVSPRLLNQAILYKHLYGFKISKDSSPITHLFF 211
P LFILC EV + +A K + G K++ S ++HL F
Sbjct: 491 PYLFILCTEVLIANIRKAEQEKLITGIKVATASPSVSHLLF 531
>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
Length = 1142
Score = 89.4 bits (220), Expect(2) = 5e-19
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 14/149 (9%)
Frame = +1
Query: 184 LFPYYSFIFCRANRTQCRSLKTLLQEFCNGSG*LVYLSKSLL-FGSKVKKSRREELSSVL 360
LF S FC+AN+ QC + +L+++ + SG + SKS + FG KV+ S + ++ +L
Sbjct: 464 LFADDSLFFCKANKEQCGIILEILKQYESVSGQQINFSKSSIQFGHKVEDSIKADIKLIL 523
Query: 361 GIKEAAKLGNYLGSDIDFGSAKSKALSIVESKIKSSILGENDY*IH-------------V 501
GI +G+YLG G +K+K S V +++S I G + +
Sbjct: 524 GIHNLGGMGSYLGLPESLGGSKTKVFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVAAT 583
Query: 502 IPNYLMSCFKFPKSVCKSIASPLSKFWWN 588
+P Y+MSCF+ PK++ + S ++KFWW+
Sbjct: 584 LPRYVMSCFRLPKAITSKLTSAVAKFWWS 612
Score = 33.5 bits (75), Expect(2) = 5e-19
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 3 SVSYRIILNGLVSSSISPSREFQQGEPLSP 92
+V Y++++NG I P R +QG+PLSP
Sbjct: 396 TVQYKVLINGQPKGLIIPERGLRQGDPLSP 425
>ref|XP_007207799.1| hypothetical protein PRUPE_ppa024472mg, partial [Prunus persica]
gi|462403441|gb|EMJ08998.1| hypothetical protein
PRUPE_ppa024472mg, partial [Prunus persica]
Length = 920
Score = 85.9 bits (211), Expect(2) = 8e-19
Identities = 51/148 (34%), Positives = 71/148 (47%), Gaps = 14/148 (9%)
Frame = +1
Query: 184 LFPYYSFIFCRANRTQCRSLKTLLQEFCNGSG*LVYLSKSLL-FGSKVKKSRREELSSVL 360
LF S F RA+ T CR LL +C SG LV KS L F S + + S+L
Sbjct: 261 LFADDSLFFLRADVTNCRRFMHLLNRYCAASGQLVNHEKSCLYFSSNTPAELKTTIGSIL 320
Query: 361 GIKEAAKLGNYLGSDIDFGSAKSKALSIVESKIKSSILGENDY*IHV------------- 501
++ GNYLG +G +K A++ V+ ++K ILG + +
Sbjct: 321 AVEGTDNPGNYLGMPTMWGRSKKAAMNYVKERVKDKILGWKQSSLSLAGKEVLIKAIATA 380
Query: 502 IPNYLMSCFKFPKSVCKSIASPLSKFWW 585
IP + M CFKF K +C I S ++KFWW
Sbjct: 381 IPTFPMQCFKFTKGLCDEINSEMAKFWW 408
Score = 36.2 bits (82), Expect(2) = 8e-19
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 3 SVSYRIILNGLVSSSISPSREFQQGEPLSP 92
SVSY +++NG + PSR +QG+PLSP
Sbjct: 193 SVSYSVLINGKPGPTFRPSRGLRQGDPLSP 222
>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1362
Score = 67.4 bits (163), Expect(3) = 2e-18
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 14/146 (9%)
Frame = +1
Query: 199 SFIFCRANRTQCRSLKTLLQEFCNGSG*LVYLSKS-LLFGSKVKKSRREELSSVLGIKEA 375
S +F +A+ +C + ++ ++ SG V LSK+ ++F V + RR + +VLG+KE
Sbjct: 688 SILFTKASVQECSMVADIISKYERASGQQVNLSKTEVVFSRSVDRERRSAIVNVLGVKEV 747
Query: 376 AKLGNYLGSDIDFGSAKSKALSIVESKIKSSILGENDY*I-------------HVIPNYL 516
+ YLG G +K + ++ +I + G + + IP Y+
Sbjct: 748 DRQEKYLGLPTIIGRSKKVTFACIKERIWKKLQGWKEKLLSRPGKEVLIKSVAQAIPTYM 807
Query: 517 MSCFKFPKSVCKSIASPLSKFWWNPS 594
MS F P + I S L++FWW S
Sbjct: 808 MSVFSLPSGLIDEIHSLLARFWWGSS 833
Score = 38.1 bits (87), Expect(3) = 2e-18
Identities = 16/30 (53%), Positives = 23/30 (76%)
Frame = +3
Query: 3 SVSYRIILNGLVSSSISPSREFQQGEPLSP 92
SVS+ +NG+V S+SPSR +QG+P+SP
Sbjct: 615 SVSFTFNVNGVVEGSLSPSRGLRQGDPISP 644
Score = 35.0 bits (79), Expect(3) = 2e-18
Identities = 15/43 (34%), Positives = 27/43 (62%)
Frame = +2
Query: 89 PPLFILCNEVSPRLLNQAILYKHLYGFKISKDSSPITHLFFVE 217
P LF+LC + LL++A K ++G +I + + ++HLFF +
Sbjct: 644 PYLFLLCADAFSTLLSKAASEKKIHGAQICRGAPVVSHLFFAD 686
>gb|AAT58873.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1264
Score = 68.2 bits (165), Expect(3) = 7e-18
Identities = 43/144 (29%), Positives = 67/144 (46%), Gaps = 14/144 (9%)
Frame = +1
Query: 199 SFIFCRANRTQCRSLKTLLQEFCNGSG*LVYLSKS-LLFGSKVKKSRREELSSVLGIKEA 375
S + RA + + L+ +L + SG ++ KS +LF +S R E+ S L I +
Sbjct: 1033 SLVLMRAGQNDAQELRRVLNIYEVASGQVINKDKSSVLFSPNTLQSDRMEVRSALCINQE 1092
Query: 376 AKLGNYLGSDIDFGSAKSKALSIVESKIKSSILGENDY*I-------------HVIPNYL 516
AK YLG + G ++ KA ++ K+ I G + + IP Y
Sbjct: 1093 AKNERYLGLPVSIGKSRRKAFEYIKRKVWLRIQGWQEKLLSKAGKEILVKAVAQAIPTYA 1152
Query: 517 MSCFKFPKSVCKSIASPLSKFWWN 588
MSCF K +C I S +SK+WW+
Sbjct: 1153 MSCFDLTKGLCDEINSMISKWWWS 1176
Score = 36.2 bits (82), Expect(3) = 7e-18
Identities = 17/30 (56%), Positives = 21/30 (70%)
Frame = +3
Query: 3 SVSYRIILNGLVSSSISPSREFQQGEPLSP 92
SV+YRI +NG S I P R +QG+PLSP
Sbjct: 960 SVTYRIKINGEHSDQIYPQRGLRQGDPLSP 989
Score = 34.3 bits (77), Expect(3) = 7e-18
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2
Query: 89 PPLFILCNEVSPRLLNQAILYKHLYGFKISKDSSPITHLFFVE 217
P LFI+C E LL +A + G K+ +D+ I HLFF +
Sbjct: 989 PYLFIICAEGLSALLQKAQADGKIEGIKVCRDTPRINHLFFAD 1031
>gb|AAD24601.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1319
Score = 70.5 bits (171), Expect(3) = 4e-17
Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 14/142 (9%)
Frame = +1
Query: 205 IFCRANRTQCRSLKTLLQEFCNGSG*LVYLSKS-LLFGSKVKKSRREELSSVLGIKEAAK 381
+ CRA ++ C + L ++ + SG L+ + KS + FG KV + + + + GI
Sbjct: 639 LVCRATKSDCEQMMLCLSQYGHISGQLINVEKSSITFGVKVDEDTKRWIKNRSGIHLEGG 698
Query: 382 LGNYLGSDIDFGSAKSKALSIVESKIKSSILGENDY*IH-------------VIPNYLMS 522
G YLG + +K ++ K++S + G D + +P Y+M+
Sbjct: 699 TGKYLGLPENLSGSKQDLFGYIKEKLQSHLSGWYDKTLSQGGKEILLKSIALALPVYIMT 758
Query: 523 CFKFPKSVCKSIASPLSKFWWN 588
CF+ PK +C + S + FWWN
Sbjct: 759 CFRLPKGLCTKLTSVMMDFWWN 780
Score = 33.5 bits (75), Expect(3) = 4e-17
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +3
Query: 3 SVSYRIILNGLVSSSISPSREFQQGEPLSP 92
SV+Y +++NG I+P R +QG+P+SP
Sbjct: 564 SVTYSVLINGQHFGHITPERGIRQGDPISP 593
Score = 32.0 bits (71), Expect(3) = 4e-17
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +2
Query: 89 PPLFILCNEVSPRLLNQAILYKHLYGFKISKDSSPITHLFFVELT 223
P LF+LC E +L QA K + G + + + HL FV+ T
Sbjct: 593 PFLFVLCTEALIHILQQAENSKKVSGIQFNGSGPSVNHLLFVDDT 637
>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1524
Score = 68.9 bits (167), Expect(3) = 7e-17
Identities = 46/143 (32%), Positives = 66/143 (46%), Gaps = 14/143 (9%)
Frame = +1
Query: 199 SFIFCRANRTQCRSLKTLLQEFCNGSG*LVYLSKSLL-FGSKVKKSRREELSSVLGIKEA 375
S FC+AN C++LK + + SG + + KS++ FGS+V S + +L +L I
Sbjct: 841 SLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSMITFGSRVYGSTQSKLKQILEIPNQ 900
Query: 376 AKLGNYLGSDIDFGSAKSKALSIVESKIKS----------SILGENDY*IHV---IPNYL 516
G YLG FG K + + ++K S G+ V +P Y
Sbjct: 901 GGGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVYA 960
Query: 517 MSCFKFPKSVCKSIASPLSKFWW 585
MSCFK PK + I S L FWW
Sbjct: 961 MSCFKLPKGIVSEIESLLMNFWW 983
Score = 34.3 bits (77), Expect(3) = 7e-17
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +3
Query: 3 SVSYRIILNGLVSSSISPSREFQQGEPLSP 92
SV Y +++NG I+P+R +QG+PLSP
Sbjct: 768 SVHYSVLINGSPHGYITPTRGIRQGDPLSP 797
Score = 32.0 bits (71), Expect(3) = 7e-17
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 89 PPLFILCNEVSPRLLNQAILYKHLYGFKISKDSSPITHLFFVE 217
P LFILC ++ L+N L G +I + ITHL F +
Sbjct: 797 PYLFILCGDILSHLINGRASSGDLRGVRIGNGAPAITHLQFAD 839
>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 68.6 bits (166), Expect(3) = 9e-17
Identities = 46/143 (32%), Positives = 65/143 (45%), Gaps = 14/143 (9%)
Frame = +1
Query: 199 SFIFCRANRTQCRSLKTLLQEFCNGSG*LVYLSKSLL-FGSKVKKSRREELSSVLGIKEA 375
S FC+AN C++LK + + SG + + KS++ FGS+V S + L +L I
Sbjct: 1067 SLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSMITFGSRVYGSTQSRLKQILEIPNQ 1126
Query: 376 AKLGNYLGSDIDFGSAKSKALSIVESKIKS----------SILGENDY*IHV---IPNYL 516
G YLG FG K + + ++K S G+ V +P Y
Sbjct: 1127 GGGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVYA 1186
Query: 517 MSCFKFPKSVCKSIASPLSKFWW 585
MSCFK PK + I S L FWW
Sbjct: 1187 MSCFKLPKGIVSEIESLLMNFWW 1209
Score = 34.3 bits (77), Expect(3) = 9e-17
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +3
Query: 3 SVSYRIILNGLVSSSISPSREFQQGEPLSP 92
SV Y +++NG I+P+R +QG+PLSP
Sbjct: 994 SVHYSVLINGSPHGYITPTRGIRQGDPLSP 1023
Score = 32.0 bits (71), Expect(3) = 9e-17
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +2
Query: 89 PPLFILCNEVSPRLLNQAILYKHLYGFKISKDSSPITHLFFVE 217
P LFILC ++ L+N L G +I + ITHL F +
Sbjct: 1023 PYLFILCGDILSHLINGRASSGDLRGVRIGNGAPAITHLQFAD 1065
>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 63.2 bits (152), Expect(3) = 2e-16
Identities = 40/146 (27%), Positives = 70/146 (47%), Gaps = 14/146 (9%)
Frame = +1
Query: 199 SFIFCRANRTQCRSLKTLLQEFCNGSG*LVYLSKSLLFGSK-VKKSRREELSSVLGIKEA 375
S +F RANR +C + +L ++ SG + KS + S+ V S+++EL+++L +++
Sbjct: 689 SLLFTRANRQECTIIVDILNQYELASGQKINYEKSEVSYSRGVSVSQKDELTNILNMRQV 748
Query: 376 AKLGNYLGSDIDFGSAKSKALSIVESKIKSSILGENDY*-------------IHVIPNYL 516
+ YLG G +K + +I + G + I IP YL
Sbjct: 749 DRHEKYLGIPSISGRSKKAIFDSLIDRIWKKLQGWKEKLLSRAGKEVLLKSVIQAIPTYL 808
Query: 517 MSCFKFPKSVCKSIASPLSKFWWNPS 594
M +KFP + + I S +++FWW S
Sbjct: 809 MGVYKFPVFIIQKIQSAMARFWWGSS 834
Score = 37.7 bits (86), Expect(3) = 2e-16
Identities = 16/30 (53%), Positives = 22/30 (73%)
Frame = +3
Query: 3 SVSYRIILNGLVSSSISPSREFQQGEPLSP 92
SV+Y I+NG V S+ P+R +QG+PLSP
Sbjct: 616 SVTYSFIINGSVCGSVVPARGLRQGDPLSP 645
Score = 33.1 bits (74), Expect(3) = 2e-16
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +2
Query: 89 PPLFILCNEVSPRLLNQAILYKHLYGFKISKDSSPITHLFFVE 217
P LFI+ + +++ + + K L+G K S+ I+HLFF +
Sbjct: 645 PYLFIMVADAFSKMIQRKVQDKQLHGAKASRSGPEISHLFFAD 687
>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
42.57) [Arabidopsis thaliana]
Length = 1662
Score = 68.2 bits (165), Expect(3) = 2e-16
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 14/143 (9%)
Frame = +1
Query: 199 SFIFCRANRTQCRSLKTLLQEFCNGSG*LVYLSKSLL-FGSKVKKSRREELSSVLGIKEA 375
S FC++N C++LK + + SG + +SKS++ FGS+V + + L ++LGI+
Sbjct: 1067 SLFFCQSNVRNCQALKDVFDVYEYYSGQKINMSKSMITFGSRVHGTTQNRLKNILGIQSH 1126
Query: 376 AKLGNYLGSDIDFGSAKSKALSIVESKIKS----------SILGENDY*IHV---IPNYL 516
G YLG FG K + + ++K S G+ V +P Y
Sbjct: 1127 GGGGKYLGLPEQFGRKKRDMFNYIIERVKKRTSSWSAKYLSPAGKEIMLKSVAMSMPVYA 1186
Query: 517 MSCFKFPKSVCKSIASPLSKFWW 585
MSCFK P ++ I + L FWW
Sbjct: 1187 MSCFKLPLNIVSEIEALLMNFWW 1209
Score = 36.6 bits (83), Expect(3) = 2e-16
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +3
Query: 3 SVSYRIILNGLVSSSISPSREFQQGEPLSP 92
SV+Y +++NG+ +I P R +QG+PLSP
Sbjct: 994 SVNYSVLVNGIPHGTIQPQRGIRQGDPLSP 1023
Score = 28.9 bits (63), Expect(3) = 2e-16
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 89 PPLFILCNEVSPRLLNQAILYKHLYGFKISKDSSPITHLFFVE 217
P LFILC ++ L+ + + G +I +THL F +
Sbjct: 1023 PYLFILCADILNHLIKNRVAEGDIRGIRIGNGVPGVTHLQFAD 1065
>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
putative protein [Arabidopsis thaliana]
Length = 1294
Score = 68.2 bits (165), Expect(3) = 2e-16
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 14/143 (9%)
Frame = +1
Query: 199 SFIFCRANRTQCRSLKTLLQEFCNGSG*LVYLSKSLL-FGSKVKKSRREELSSVLGIKEA 375
S FC++N C++LK + + SG + +SKS++ FGS+V + + L ++LGI+
Sbjct: 1047 SLFFCQSNVRNCQALKDVFDVYEYYSGQKINMSKSMITFGSRVHGTTQNRLKNILGIQSH 1106
Query: 376 AKLGNYLGSDIDFGSAKSKALSIVESKIKS----------SILGENDY*IHV---IPNYL 516
G YLG FG K + + ++K S G+ V +P Y
Sbjct: 1107 GGGGKYLGLPEQFGRKKRDMFNYIIERVKKRTSSWSAKYLSPAGKEIMLKSVAMSMPVYA 1166
Query: 517 MSCFKFPKSVCKSIASPLSKFWW 585
MSCFK P ++ I + L FWW
Sbjct: 1167 MSCFKLPLNIVSEIEALLMNFWW 1189
Score = 36.6 bits (83), Expect(3) = 2e-16
Identities = 14/30 (46%), Positives = 22/30 (73%)
Frame = +3
Query: 3 SVSYRIILNGLVSSSISPSREFQQGEPLSP 92
SV+Y +++NG+ +I P R +QG+PLSP
Sbjct: 974 SVNYSVLVNGIPHGTIQPQRGIRQGDPLSP 1003
Score = 28.9 bits (63), Expect(3) = 2e-16
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 89 PPLFILCNEVSPRLLNQAILYKHLYGFKISKDSSPITHLFFVE 217
P LFILC ++ L+ + + G +I +THL F +
Sbjct: 1003 PYLFILCADILNHLIKNRVAEGDIRGIRIGNGVPGVTHLQFAD 1045
>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 71.2 bits (173), Expect(3) = 4e-16
Identities = 45/143 (31%), Positives = 63/143 (44%), Gaps = 14/143 (9%)
Frame = +1
Query: 199 SFIFCRANRTQCRSLKTLLQEFCNGSG*LVYLSKSLLFGS-KVKKSRREELSSVLGIKEA 375
S F RA C +L LL +C SG L+ + KS +F S LSS++ I
Sbjct: 1294 SLFFLRATLQNCETLSDLLHTYCIASGQLINVEKSSIFFSPNTPPEIAHLLSSIMQIPVV 1353
Query: 376 AKLGNYLGSDIDFGSAKSKALSIVESKIKSSILGENDY*IH-------------VIPNYL 516
+ G YLG + +K KAL ++ I + G + IP Y
Sbjct: 1354 SDPGTYLGLPTFWHRSKKKALGFIKDSILRKVKGWKQATLSQAGKEVLIKAVATAIPAYP 1413
Query: 517 MSCFKFPKSVCKSIASPLSKFWW 585
M CFKFP ++CK + L+ FWW
Sbjct: 1414 MGCFKFPSTLCKELNGILADFWW 1436
Score = 30.8 bits (68), Expect(3) = 4e-16
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 9 SYRIILNGLVSSSISPSREFQQGEPLSP 92
S +++NG S PSR +QG+PLSP
Sbjct: 1223 SLSVLINGKPGPSFLPSRGLRQGDPLSP 1250
Score = 30.4 bits (67), Expect(3) = 4e-16
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 89 PPLFILCNEVSPRLLNQAILYKHLYGFKISKDSSPITHLFFVE 217
P LF+ N+V R++N+ L I ++ P++HLFF +
Sbjct: 1250 PFLFLFVNDVLSRMINKMCQDSLLTPVTIGPNNLPVSHLFFAD 1292
>ref|XP_007210987.1| hypothetical protein PRUPE_ppa021345mg [Prunus persica]
gi|462406722|gb|EMJ12186.1| hypothetical protein
PRUPE_ppa021345mg [Prunus persica]
Length = 759
Score = 78.2 bits (191), Expect(2) = 6e-16
Identities = 47/147 (31%), Positives = 73/147 (49%), Gaps = 14/147 (9%)
Frame = +1
Query: 184 LFPYYSFIFCRANRTQCRSLKTLLQEFCNGSG*LVYLSKS-LLFGSKVKKSRREELSSVL 360
LF + IF +A C+++ LLQ +C SG V L+KS ++F S R + ++L
Sbjct: 74 LFADDTLIFLKATTQNCQNISRLLQAYCAASGQQVSLTKSNVVFSSNTPSYVRASMCAIL 133
Query: 361 GIKEAAKLGNYLGSDIDFGSAKSKALSIVESKIKSSILGENDY*IH-------------V 501
G+ + G YLG +G AK + L V+ +I + G N + +
Sbjct: 134 GMPDVTDAGKYLGLPTSWGRAKKEELVYVKDRILRKVHGWNQHCLSQAGREILIKSVALA 193
Query: 502 IPNYLMSCFKFPKSVCKSIASPLSKFW 582
+P Y M+ FKFP ++CK I S L+ FW
Sbjct: 194 VPAYPMNIFKFPTTLCKEIDSVLAGFW 220
Score = 34.3 bits (77), Expect(2) = 6e-16
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +3
Query: 3 SVSYRIILNGLVSSSISPSREFQQGEPLSP 92
+V++ +++NG + SPSR +QG+P+SP
Sbjct: 6 TVNFTVVINGQQGGAFSPSRGIRQGDPISP 35
>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1374
Score = 75.9 bits (185), Expect(2) = 7e-16
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 14/148 (9%)
Frame = +1
Query: 184 LFPYYSFIFCRANRTQCRSLKTLLQEFCNGSG*LV-YLSKSLLFGSKVKKSRREELSSVL 360
LF S +C+ N + +++E+ SG V YL S+ FG + + RR + L
Sbjct: 680 LFADDSMFYCKVNDEALGQIIRIIEEYSLASGQRVNYLKSSIYFGKHISEERRCLVKRKL 739
Query: 361 GIKEAAKLGNYLGSDIDFGSAKSKALSIVESKIKSSILGENDY*IH-------------V 501
GI+ G YLG F +K LS ++ ++ +LG +
Sbjct: 740 GIEREGGEGVYLGLPESFQGSKVATLSYLKDRLGKKVLGWQSNFLSPGGKEILLKAVAMA 799
Query: 502 IPNYLMSCFKFPKSVCKSIASPLSKFWW 585
+P Y MSCFK PK++C+ I S +++FWW
Sbjct: 800 LPTYTMSCFKIPKTICQQIESVMAEFWW 827
Score = 36.2 bits (82), Expect(2) = 7e-16
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 3 SVSYRIILNGLVSSSISPSREFQQGEPLSP 92
SV Y++++NG I PSR +QG+PLSP
Sbjct: 612 SVRYQVLINGTPHGEIIPSRGLRQGDPLSP 641
>ref|XP_004296207.1| PREDICTED: uncharacterized protein LOC101297422 [Fragaria vesca
subsp. vesca]
Length = 1096
Score = 80.1 bits (196), Expect(2) = 7e-16
Identities = 47/148 (31%), Positives = 76/148 (51%), Gaps = 14/148 (9%)
Frame = +1
Query: 184 LFPYYSFIFCRANRTQCRSLKTLLQEFCNGSG*LVYLSKS-LLFGSKVKKSRREELSSVL 360
LF SFIF +A CR + ++L + S V L+KS + F V + +++EL++VL
Sbjct: 445 LFADDSFIFFKAEERGCRKVGSILSRYETLSRQQVSLAKSKIAFSQNVPRWKQDELAAVL 504
Query: 361 GIKEAAKLGNYLGSDIDFGSAKSKALSIVESKIKSSILGENDY*IHV------------- 501
G+K K YLG + +K KA S + +I+ G D + +
Sbjct: 505 GVKRVEKHKKYLGLPTELSYSKEKAFSFLCERIRKRTQGWRDKTLTIAGKEVLIKAVVQS 564
Query: 502 IPNYLMSCFKFPKSVCKSIASPLSKFWW 585
IP Y+MSCF+ PK +C ++ +++FWW
Sbjct: 565 IPTYIMSCFELPKHMCSAMQRLMARFWW 592
Score = 32.0 bits (71), Expect(2) = 7e-16
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +3
Query: 3 SVSYRIILNGLVSSSISPSREFQQGEPLSP-LFSSYA 110
+VSY I+NG + PSR +QG+ +SP LF YA
Sbjct: 377 TVSYSFIINGDPVGQVVPSRGLRQGDAISPYLFVIYA 413
>ref|XP_004305827.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 888
Score = 61.6 bits (148), Expect(3) = 7e-16
Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 18/147 (12%)
Frame = +1
Query: 199 SFIFCRANRTQCRSLKTLLQEFCNGSG*LV-YLSKSLLFGSKVKKSRREELSSVLGIKEA 375
SFIF A +C+ +TLL + + SG + Y S++F V + EL+++L ++ +
Sbjct: 253 SFIFGAAEADECQRFRTLLNMYESASGQKINYQKSSVVFRRNVSPENQSELAAILQVQLS 312
Query: 376 AKLGNYLGSDIDFGSAKSKALSIVESKIKSSILGENDY*IHV-------------IPNYL 516
+ YLG + G +K++ + ++ K+ + +LG + V +P Y
Sbjct: 313 TEHDRYLGLPLRVGKSKTQIFAYIKEKLSNKLLGWKAKLLSVAGKEVLIKAVAQTMPLYA 372
Query: 517 MSCFKFPKSVCKSI----ASPLSKFWW 585
M+C+ PK++C+ I A+ L+K W
Sbjct: 373 MNCYLLPKTLCEDIHQLCAAMLAKQAW 399
Score = 38.9 bits (89), Expect(3) = 7e-16
Identities = 18/30 (60%), Positives = 22/30 (73%)
Frame = +3
Query: 3 SVSYRIILNGLVSSSISPSREFQQGEPLSP 92
SV Y I+LNG + ISPSR +QG+PLSP
Sbjct: 180 SVQYSILLNGKPTEVISPSRGIRQGDPLSP 209
Score = 31.2 bits (69), Expect(3) = 7e-16
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 89 PPLFILCNEVSPRLLNQAILYKHLYGFKISKDSSPITHLFFVE 217
P LFILC E L+++ + + G K+S + + HLFF +
Sbjct: 209 PYLFILCAEGLSSLISKVVADYTIKGLKLSPQAPILHHLFFAD 251
>ref|XP_007203344.1| hypothetical protein PRUPE_ppa020282mg [Prunus persica]
gi|462398875|gb|EMJ04543.1| hypothetical protein
PRUPE_ppa020282mg [Prunus persica]
Length = 1496
Score = 66.6 bits (161), Expect(3) = 2e-15
Identities = 36/143 (25%), Positives = 71/143 (49%), Gaps = 14/143 (9%)
Frame = +1
Query: 199 SFIFCRANRTQCRSLKTLLQEFCNGSG*LVYLSKSLL-FGSKVKKSRREELSSVLGIKEA 375
SF+F RA++ C L + Q++ SG ++L KS + F + ++ ++ L++VLG++
Sbjct: 1048 SFLFLRADQQDCEQLSIIFQKYEMVSGQKIHLEKSCVSFSINMDRTDQDNLAAVLGVRRV 1107
Query: 376 AKLGNYLGSDIDFGSAKSKALSIVESKIKSSILGENDY*I-------------HVIPNYL 516
+ YLG G ++ + + ++ +I I G + +P Y+
Sbjct: 1108 DQHDVYLGLPTHVGRSRRQCFNSLKERIWKKIQGWKAKLLSFAGKEILLKVVAQAVPIYM 1167
Query: 517 MSCFKFPKSVCKSIASPLSKFWW 585
M+CF PK +C I ++++WW
Sbjct: 1168 MNCFLIPKCLCNEIQQVMARYWW 1190
Score = 32.3 bits (72), Expect(3) = 2e-15
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 89 PPLFILCNEVSPRLLNQAILYKHLYGFKISKDSSPITHLFFVE 217
P LF+LC E L+ QA L+G + + + ++HLFF +
Sbjct: 1004 PYLFLLCAEALSSLILQAERRNLLHGVNLCRGAPSVSHLFFAD 1046
Score = 31.6 bits (70), Expect(3) = 2e-15
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +3
Query: 3 SVSYRIILNGLVSSSISPSREFQQGEPLSP 92
+VSY +LNG + P R +QG+PLSP
Sbjct: 975 TVSYSFMLNGNPVGYVIPQRGLRQGDPLSP 1004
>ref|XP_007203701.1| hypothetical protein PRUPE_ppa020995mg, partial [Prunus persica]
gi|462399232|gb|EMJ04900.1| hypothetical protein
PRUPE_ppa020995mg, partial [Prunus persica]
Length = 1367
Score = 65.9 bits (159), Expect(3) = 3e-15
Identities = 37/148 (25%), Positives = 72/148 (48%), Gaps = 14/148 (9%)
Frame = +1
Query: 202 FIFCRANRTQCRSLKTLLQEFCNGSG*LVYLSKSLL-FGSKVKKSRREELSSVLGIKEAA 378
F+F RAN+ C L + Q++ G ++L KS + F + + ++ ++ L++VL +K
Sbjct: 935 FLFLRANQQDCEQLSIIFQKYEMVLGQKIHLEKSCVSFSNNMDRTDQDNLAAVLEVKRVD 994
Query: 379 KLGNYLGSDIDFGSAKSKALSIVESKIKSSILGENDY*I-------------HVIPNYLM 519
+ YLG G ++ + + ++ +I I G + V+P Y+M
Sbjct: 995 QHDVYLGLPTHVGRSRRQCFNSLKERIWKKIQGWKAKLLSFAGKEILLKVVAQVVPIYMM 1054
Query: 520 SCFKFPKSVCKSIASPLSKFWWNPSWGK 603
+CF PK +C I ++++WW G+
Sbjct: 1055 NCFLIPKCLCDEIQQVMARYWWGEQDGQ 1082
Score = 32.3 bits (72), Expect(3) = 3e-15
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 89 PPLFILCNEVSPRLLNQAILYKHLYGFKISKDSSPITHLFFVE 217
P LF+LC E L+ QA L+G + + + ++HLFF +
Sbjct: 890 PYLFLLCAEALSSLILQAERRNLLHGVNLCRGAPSVSHLFFTD 932
Score = 31.2 bits (69), Expect(3) = 3e-15
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 6 VSYRIILNGLVSSSISPSREFQQGEPLSP 92
VSY +LNG + P R +QG+PLSP
Sbjct: 862 VSYSFMLNGNPVGYVIPQRGLRQGDPLSP 890
>gb|EEC66671.1| hypothetical protein OsI_32959 [Oryza sativa Indica Group]
Length = 697
Score = 64.3 bits (155), Expect(3) = 5e-15
Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 14/143 (9%)
Frame = +1
Query: 199 SFIFCRANRTQCRSLKTLLQEFCNGSG*LVYLSKSL-LFGSKVKKSRREELSSVLGIKEA 375
S + +A + +K ++ ++ SG +V KS+ +F S + + ++ S LGI
Sbjct: 206 SLLLLKATESVANEMKQIILDYERSSGQIVNRDKSVVMFSSNMDEEEKKVFSHTLGINCI 265
Query: 376 AKLGNYLGSDIDFGSAKSKALSIVESKIKSSILGENDY*I-------------HVIPNYL 516
A YLG + G +K+K ++ KI I G + + IP Y
Sbjct: 266 AHNDRYLGLPVFIGRSKAKTFEYLKEKIWRCIQGWKEKFLSKAGKEILIKAVAQAIPTYA 325
Query: 517 MSCFKFPKSVCKSIASPLSKFWW 585
MSCF KS+C + S + +FWW
Sbjct: 326 MSCFYLTKSLCDELTSMILRFWW 348
Score = 32.7 bits (73), Expect(3) = 5e-15
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +3
Query: 3 SVSYRIILNGLVSSSISPSREFQQGEPLSP 92
+V+Y+I +NG + I P R +QG+PLSP
Sbjct: 133 TVNYKIKVNGDYTEVIKPDRGLRQGDPLSP 162
Score = 32.0 bits (71), Expect(3) = 5e-15
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 89 PPLFILCNEVSPRLLNQAILYKHLYGFKISKDSSPITHLFFVE 217
P LF++C E + A K L G +I + + +THLFF +
Sbjct: 162 PYLFVICAEAFSAAIQAAEGSKRLCGLRICRGAPILTHLFFAD 204
>gb|AAD15377.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1044
Score = 72.4 bits (176), Expect(2) = 6e-15
Identities = 46/154 (29%), Positives = 71/154 (46%), Gaps = 14/154 (9%)
Frame = +1
Query: 184 LFPYYSFIFCRANRTQCRSLKTLLQEFCNGSG*LVYLSKSLL-FGSKVKKSRREELSSVL 360
LF + FCR++ C++ +L+++ SG ++ SKS + F K + E +L
Sbjct: 506 LFADDTIFFCRSDLKSCKTFLCILKKYEEASGQMINKSKSAITFSRKTPDHIKTEAQQIL 565
Query: 361 GIKEAAKLGNYLGSDIDFGSAKSKALSIVESKIKSSILGENDY*IHV------------- 501
GI+ LG YLG FG K + + +I+ L + +
Sbjct: 566 GIQLVGGLGKYLGLPKMFGRKKRDLFNQIVDRIRQRSLSWSSRFLSTAGKTTMLKSVLAS 625
Query: 502 IPNYLMSCFKFPKSVCKSIASPLSKFWWNPSWGK 603
+P Y MSCFK S+CK I S L+ FWW+ S K
Sbjct: 626 MPTYTMSCFKLLVSLCKRIQSALTHFWWDSSADK 659
Score = 36.6 bits (83), Expect(2) = 6e-15
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 8/50 (16%)
Frame = +3
Query: 3 SVSYRIILNGLVSSSISPSREFQQGEPLSP--------LFSSYAMKSRLD 128
+VSY +LNG +++P R +QG+PLSP + S K++LD
Sbjct: 438 TVSYSFLLNGSAQGAVTPERGLRQGDPLSPFLFIICSEVLSGLCRKAQLD 487