BLASTX nr result
ID: Sinomenium22_contig00009942
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Sinomenium22_contig00009942 (1072 letters) Database: ./nr 38,876,450 sequences; 13,856,398,315 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EMT33750.1| Putative chromatin-remodeling complex ATPase chai... 73 2e-10 gb|EMS59266.1| Threonyl-tRNA synthetase, mitochondrial [Triticum... 52 2e-08 gb|EMT26300.1| Nuclear pore complex protein [Aegilops tauschii] 52 8e-06 >gb|EMT33750.1| Putative chromatin-remodeling complex ATPase chain [Aegilops tauschii] Length = 950 Score = 72.8 bits (177), Expect = 2e-10 Identities = 38/60 (63%), Positives = 43/60 (71%), Gaps = 1/60 (1%) Frame = -3 Query: 908 GALGQR*ELLPCDLEVTSSSCGNSLLL-CKVRLCTIDPNWPDPSLGPRIRGSFVHRAVLF 732 G+LG +LLPCD EVT SS GNSLLL C+ RL TIDP W DPS P GS++HRA LF Sbjct: 4 GSLGAAVKLLPCDHEVTGSSPGNSLLLKCRERLRTIDPKWSDPSPDPCASGSYMHRAALF 63 >gb|EMS59266.1| Threonyl-tRNA synthetase, mitochondrial [Triticum urartu] Length = 1047 Score = 51.6 bits (122), Expect(2) = 2e-08 Identities = 32/65 (49%), Positives = 36/65 (55%), Gaps = 1/65 (1%) Frame = -3 Query: 947 NYCVVTSHMPGRGGALGQR*ELLPCDLEVTSSSCGNSLL-LCKVRLCTIDPNWPDPSLGP 771 NY +V G + ELLPCD EVT SS GNSLL C+ RL TID W DPS P Sbjct: 617 NYILVVGAKEAESGKIL---ELLPCDHEVTGSSPGNSLLQKCRDRLRTIDAKWSDPSPDP 673 Query: 770 RIRGS 756 G+ Sbjct: 674 GQAGA 678 Score = 34.7 bits (78), Expect(2) = 2e-08 Identities = 17/42 (40%), Positives = 25/42 (59%) Frame = -1 Query: 775 DPAYAGASCTGLSFLYQIVGMLLESLIIFCFYLFSNNFVKSL 650 DP AGA+CTGL FLY +L+ +FC L+ + + +L Sbjct: 672 DPGQAGATCTGLPFLY-----ILKYTCVFCECLYEGDKIGNL 708 >gb|EMT26300.1| Nuclear pore complex protein [Aegilops tauschii] Length = 1176 Score = 51.6 bits (122), Expect(2) = 8e-06 Identities = 29/52 (55%), Positives = 33/52 (63%), Gaps = 1/52 (1%) Frame = -3 Query: 908 GALGQR*ELLPCDLEVTSSSCGNSLL-LCKVRLCTIDPNWPDPSLGPRIRGS 756 G+LG +LLPCD EVT SS GNSLL C+ L TIDP W DP P G+ Sbjct: 527 GSLGAVVKLLPCDHEVTGSSPGNSLLQKCREGLRTIDPKWSDPFPDPAQAGA 578 Score = 25.8 bits (55), Expect(2) = 8e-06 Identities = 10/12 (83%), Positives = 11/12 (91%) Frame = -1 Query: 775 DPAYAGASCTGL 740 DPA AGA+CTGL Sbjct: 572 DPAQAGATCTGL 583