BLASTX nr result

ID: Sinomenium22_contig00009942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00009942
         (1072 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EMT33750.1| Putative chromatin-remodeling complex ATPase chai...    73   2e-10
gb|EMS59266.1| Threonyl-tRNA synthetase, mitochondrial [Triticum...    52   2e-08
gb|EMT26300.1| Nuclear pore complex protein [Aegilops tauschii]        52   8e-06

>gb|EMT33750.1| Putative chromatin-remodeling complex ATPase chain [Aegilops
           tauschii]
          Length = 950

 Score = 72.8 bits (177), Expect = 2e-10
 Identities = 38/60 (63%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
 Frame = -3

Query: 908 GALGQR*ELLPCDLEVTSSSCGNSLLL-CKVRLCTIDPNWPDPSLGPRIRGSFVHRAVLF 732
           G+LG   +LLPCD EVT SS GNSLLL C+ RL TIDP W DPS  P   GS++HRA LF
Sbjct: 4   GSLGAAVKLLPCDHEVTGSSPGNSLLLKCRERLRTIDPKWSDPSPDPCASGSYMHRAALF 63


>gb|EMS59266.1| Threonyl-tRNA synthetase, mitochondrial [Triticum urartu]
          Length = 1047

 Score = 51.6 bits (122), Expect(2) = 2e-08
 Identities = 32/65 (49%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
 Frame = -3

Query: 947 NYCVVTSHMPGRGGALGQR*ELLPCDLEVTSSSCGNSLL-LCKVRLCTIDPNWPDPSLGP 771
           NY +V        G +    ELLPCD EVT SS GNSLL  C+ RL TID  W DPS  P
Sbjct: 617 NYILVVGAKEAESGKIL---ELLPCDHEVTGSSPGNSLLQKCRDRLRTIDAKWSDPSPDP 673

Query: 770 RIRGS 756
              G+
Sbjct: 674 GQAGA 678



 Score = 34.7 bits (78), Expect(2) = 2e-08
 Identities = 17/42 (40%), Positives = 25/42 (59%)
 Frame = -1

Query: 775 DPAYAGASCTGLSFLYQIVGMLLESLIIFCFYLFSNNFVKSL 650
           DP  AGA+CTGL FLY     +L+   +FC  L+  + + +L
Sbjct: 672 DPGQAGATCTGLPFLY-----ILKYTCVFCECLYEGDKIGNL 708


>gb|EMT26300.1| Nuclear pore complex protein [Aegilops tauschii]
          Length = 1176

 Score = 51.6 bits (122), Expect(2) = 8e-06
 Identities = 29/52 (55%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
 Frame = -3

Query: 908 GALGQR*ELLPCDLEVTSSSCGNSLL-LCKVRLCTIDPNWPDPSLGPRIRGS 756
           G+LG   +LLPCD EVT SS GNSLL  C+  L TIDP W DP   P   G+
Sbjct: 527 GSLGAVVKLLPCDHEVTGSSPGNSLLQKCREGLRTIDPKWSDPFPDPAQAGA 578



 Score = 25.8 bits (55), Expect(2) = 8e-06
 Identities = 10/12 (83%), Positives = 11/12 (91%)
 Frame = -1

Query: 775 DPAYAGASCTGL 740
           DPA AGA+CTGL
Sbjct: 572 DPAQAGATCTGL 583


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