BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00009810
         (1019 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containi...   284   4e-74
emb|CBI36294.3| unnamed protein product [Vitis vinifera]              284   4e-74
ref|XP_007023868.1| Pentatricopeptide repeat (PPR) superfamily p...   264   5e-68
ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containi...   263   1e-67
ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containi...   263   1e-67
ref|XP_007215907.1| hypothetical protein PRUPE_ppa004160mg [Prun...   261   2e-67
ref|XP_006465352.1| PREDICTED: pentatricopeptide repeat-containi...   261   3e-67
gb|EXB67320.1| hypothetical protein L484_025802 [Morus notabilis]     258   2e-66
ref|XP_006427239.1| hypothetical protein CICLE_v100269871mg, par...   258   4e-66
ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containi...   255   2e-65
ref|XP_002305285.2| pentatricopeptide repeat-containing family p...   254   4e-65
ref|XP_007144700.1| hypothetical protein PHAVU_007G177800g [Phas...   253   1e-64
ref|XP_002530894.1| pentatricopeptide repeat-containing protein,...   253   1e-64
ref|XP_004305328.1| PREDICTED: pentatricopeptide repeat-containi...   251   3e-64
ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containi...   251   3e-64
ref|XP_006392896.1| hypothetical protein EUTSA_v10011389mg [Eutr...   248   3e-63
ref|XP_003630734.1| Pentatricopeptide repeat-containing protein ...   247   6e-63
ref|XP_002894392.1| pentatricopeptide repeat-containing protein ...   244   4e-62
ref|XP_004503476.1| PREDICTED: pentatricopeptide repeat-containi...   244   5e-62
ref|XP_006364201.1| PREDICTED: pentatricopeptide repeat-containi...   243   1e-61

>ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Vitis vinifera]
          Length = 624

 Score =  284 bits (727), Expect = 4e-74
 Identities = 150/301 (49%), Positives = 196/301 (65%), Gaps = 16/301 (5%)
 Frame = +3

Query: 3    KPGIDDLDQLLYLLCKKKFVRFVQVLFDKIKFEFSPSAKTYRILMRGWCNVGILFMPGTY 182
            K G+ D+DQLLY+LCK+K V+  Q  FDK+  E  P+AKTY ILMRGW +VG        
Sbjct: 182  KAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKL 241

Query: 183  LMK-----CSNEVVLWMW*RTIPVRIFVPTG*CRVG--------L*AISRDGFSWSQAEC 323
              +     C+ +VV +           +    C+ G           +  +G +      
Sbjct: 242  FEEMRERGCAVDVVAYN---------SLLEALCKGGNVDEAYKLFREMGSNGLAPDACSY 292

Query: 324  LYLIRFSFEASDVHSAMRVLDRTRRFNLEPNVFTYNCILKLLIKSQRVEDAYQILDEMVE 503
               IR   E +D+HSA +VLDR RR+NL PNVFTYNCI+K L KS++V++AYQ+LDEM+E
Sbjct: 293  SIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIE 352

Query: 504  RGVNPDIWSYNVIQAFHCDHCEVNKA---DDWSDGERWVLAGSAYLQLVLKMLIKVGRFD 674
            RGV+PD+WSYN IQAFHCDHCEVNKA       + E  +     Y  +VLKML++VGRFD
Sbjct: 353  RGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTY-NMVLKMLLRVGRFD 411

Query: 675  RTTALWKGMADRGFYASVSTYAVMIHGQCKKKGRVEDACKYFEMMIDEGIPPYPCSYKLL 854
            R T +W GM +RGFY + STYAVM+HG CKKKG++E+ACKYFEMMID+GIPPY C+ +LL
Sbjct: 412  RVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELL 471

Query: 855  K 857
            +
Sbjct: 472  R 472



 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 71/264 (26%), Positives = 118/264 (44%), Gaps = 16/264 (6%)
 Frame = +1

Query: 235  LLESLCRLGNAE*AYKLFQEMGSHGLKQNACT*FDFHSKPVMSIQP*EFLIEREGSIWSL 414
            LLE+LC+ GN + AYKLF+EMGS+GL  +AC+ +    +    +       +    +   
Sbjct: 260  LLEALCKGGNVDEAYKLFREMGSNGLAPDACS-YSIFIRAYCEVNDIHSAFQVLDRMRRY 318

Query: 415  MCLLIIAFSSC*LRAKGWKMRTKYLMKWLREVLIRIYGVTM*SKRSIVI-------IAKL 573
              +  +   +C ++      +     + L E++ R     + S  +I         + K 
Sbjct: 319  NLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKA 378

Query: 574  IRLMIGRMEKDGCLPDRHTYNWCLKC*SK*EDLIEQRHCGKVWRIGDFTLQSQ-----PM 738
            +RL I RMEK+ C+PDRHTYN  LK   +          G+  R+ D     +     P 
Sbjct: 379  LRL-ISRMEKENCMPDRHTYNMVLKMLLR---------VGRFDRVTDVWGGMEERGFYPA 428

Query: 739  LS*YMVSA----RRRAGLRMLVNTLR**LMKGFLHILAAINC*KEYLLQLGFWEKIQILA 906
             S Y V      +++  L          +  G       +   +  ++ LGF E+I +LA
Sbjct: 429  ASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRVIGLGFSEQIDVLA 488

Query: 907  DKMLQSSSCSIQDLSQMMNDDGSS 978
             KM +S+SC IQ+LS +M  + +S
Sbjct: 489  GKMERSTSCVIQELSSVMRGEKAS 512


>emb|CBI36294.3| unnamed protein product [Vitis vinifera]
          Length = 517

 Score =  284 bits (727), Expect = 4e-74
 Identities = 150/301 (49%), Positives = 196/301 (65%), Gaps = 16/301 (5%)
 Frame = +3

Query: 3    KPGIDDLDQLLYLLCKKKFVRFVQVLFDKIKFEFSPSAKTYRILMRGWCNVGILFMPGTY 182
            K G+ D+DQLLY+LCK+K V+  Q  FDK+  E  P+AKTY ILMRGW +VG        
Sbjct: 155  KAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKL 214

Query: 183  LMK-----CSNEVVLWMW*RTIPVRIFVPTG*CRVG--------L*AISRDGFSWSQAEC 323
              +     C+ +VV +           +    C+ G           +  +G +      
Sbjct: 215  FEEMRERGCAVDVVAYN---------SLLEALCKGGNVDEAYKLFREMGSNGLAPDACSY 265

Query: 324  LYLIRFSFEASDVHSAMRVLDRTRRFNLEPNVFTYNCILKLLIKSQRVEDAYQILDEMVE 503
               IR   E +D+HSA +VLDR RR+NL PNVFTYNCI+K L KS++V++AYQ+LDEM+E
Sbjct: 266  SIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIE 325

Query: 504  RGVNPDIWSYNVIQAFHCDHCEVNKA---DDWSDGERWVLAGSAYLQLVLKMLIKVGRFD 674
            RGV+PD+WSYN IQAFHCDHCEVNKA       + E  +     Y  +VLKML++VGRFD
Sbjct: 326  RGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTY-NMVLKMLLRVGRFD 384

Query: 675  RTTALWKGMADRGFYASVSTYAVMIHGQCKKKGRVEDACKYFEMMIDEGIPPYPCSYKLL 854
            R T +W GM +RGFY + STYAVM+HG CKKKG++E+ACKYFEMMID+GIPPY C+ +LL
Sbjct: 385  RVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELL 444

Query: 855  K 857
            +
Sbjct: 445  R 445



 Score = 73.9 bits (180), Expect = 1e-10
 Identities = 71/264 (26%), Positives = 118/264 (44%), Gaps = 16/264 (6%)
 Frame = +1

Query: 235 LLESLCRLGNAE*AYKLFQEMGSHGLKQNACT*FDFHSKPVMSIQP*EFLIEREGSIWSL 414
           LLE+LC+ GN + AYKLF+EMGS+GL  +AC+ +    +    +       +    +   
Sbjct: 233 LLEALCKGGNVDEAYKLFREMGSNGLAPDACS-YSIFIRAYCEVNDIHSAFQVLDRMRRY 291

Query: 415 MCLLIIAFSSC*LRAKGWKMRTKYLMKWLREVLIRIYGVTM*SKRSIVI-------IAKL 573
             +  +   +C ++      +     + L E++ R     + S  +I         + K 
Sbjct: 292 NLVPNVFTYNCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKA 351

Query: 574 IRLMIGRMEKDGCLPDRHTYNWCLKC*SK*EDLIEQRHCGKVWRIGDFTLQSQ-----PM 738
           +RL I RMEK+ C+PDRHTYN  LK   +          G+  R+ D     +     P 
Sbjct: 352 LRL-ISRMEKENCMPDRHTYNMVLKMLLR---------VGRFDRVTDVWGGMEERGFYPA 401

Query: 739 LS*YMVSA----RRRAGLRMLVNTLR**LMKGFLHILAAINC*KEYLLQLGFWEKIQILA 906
            S Y V      +++  L          +  G       +   +  ++ LGF E+I +LA
Sbjct: 402 ASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTVELLRNRVIGLGFSEQIDVLA 461

Query: 907 DKMLQSSSCSIQDLSQMMNDDGSS 978
            KM +S+SC IQ+LS +M  + +S
Sbjct: 462 GKMERSTSCVIQELSSVMRGEKAS 485


>ref|XP_007023868.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao]
            gi|508779234|gb|EOY26490.1| Pentatricopeptide repeat
            (PPR) superfamily protein [Theobroma cacao]
          Length = 520

 Score =  264 bits (674), Expect = 5e-68
 Identities = 142/311 (45%), Positives = 197/311 (63%), Gaps = 16/311 (5%)
 Frame = +3

Query: 3    KPGIDDLDQLLYLLCKKKFVRFVQVLFDKIKFEFSPSAKTYRILMRGWCNVGILFMPGTY 182
            +P I D+DQLL++LCK+K V+  Q  FD++K EF PSAK+Y IL+RGW ++G        
Sbjct: 177  RPSIHDVDQLLFVLCKRKHVKQAQGFFDRVKHEFEPSAKSYSILVRGWGDIGEACQARKV 236

Query: 183  LMK-----CSNEVVLWMW*RTI---------PVRIFVPTG*CRVGL*AISRDGFSWSQAE 320
              +     CS +V+ +                 ++F   G  R+ L A S   F      
Sbjct: 237  FDEMVQRGCSIDVLAYNCLLEALCKSGNVDEAYKMFGAMGSSRIELDACSYSVF------ 290

Query: 321  CLYLIRFSFEASDVHSAMRVLDRTRRFNLEPNVFTYNCILKLLIKSQRVEDAYQILDEMV 500
                IR   EA+D+H+A RVLDR RR+NL PN+FTYNCI++ L  + +V++AYQ+L EM+
Sbjct: 291  ----IRAYCEANDIHAAFRVLDRMRRYNLVPNLFTYNCIIRKLCNNDKVDEAYQLLTEMI 346

Query: 501  ERGVNPDIWSYNVIQAFHCDHCEVNKADDWSD--GERWVLAGSAYLQLVLKMLIKVGRFD 674
            ERG++PD WSYN I A+HC+H EVN+A +      +           + LK+LI++GRFD
Sbjct: 347  ERGISPDEWSYNAILAYHCEHSEVNRALNLISRMEKNECFPDRHTYNMALKLLIRIGRFD 406

Query: 675  RTTALWKGMADRGFYASVSTYAVMIHGQCKKKGRVEDACKYFEMMIDEGIPPYPCSYKLL 854
            R T LW+ MA+RGFY SVSTYAVMIHG CKK+G++E+AC+YFE+MIDEGIPPY  + +LL
Sbjct: 407  RATELWESMANRGFYPSVSTYAVMIHGLCKKRGKLEEACRYFEIMIDEGIPPYSSTVELL 466

Query: 855  KRISFAARILG 887
            +      R+LG
Sbjct: 467  RN-----RLLG 472



 Score = 65.9 bits (159), Expect = 3e-08
 Identities = 78/284 (27%), Positives = 119/284 (41%), Gaps = 32/284 (11%)
 Frame = +1

Query: 205  LFYGCGSVQYLLESLCRLGNAE*AYKLFQEMGSHGLKQNA----------CT*FDFHSKP 354
            L Y C     LLE+LC+ GN + AYK+F  MGS  ++ +A          C   D H+  
Sbjct: 250  LAYNC-----LLEALCKSGNVDEAYKMFGAMGSSRIELDACSYSVFIRAYCEANDIHAA- 303

Query: 355  VMSIQP*EFLIEREGSIWSLMCLLIIAFSSC*LRAKGWKMRTKYLMKWLREVLIRIYGVT 534
                    F +      ++L+  L     +C +R      +     + L E++ R     
Sbjct: 304  --------FRVLDRMRRYNLVPNLFTY--NCIIRKLCNNDKVDEAYQLLTEMIERGISPD 353

Query: 535  M*SKRSIVI-------IAKLIRLMIGRMEKDGCLPDRHTYNWCLKC*SK*EDLIEQRHCG 693
              S  +I+        + + + L I RMEK+ C PDRHTYN  LK               
Sbjct: 354  EWSYNAILAYHCEHSEVNRALNL-ISRMEKNECFPDRHTYNMALKL-------------- 398

Query: 694  KVWRIGDFTLQSQ-----------PMLS*YMVS----ARRRAGLRMLVNTLR**LMKGFL 828
             + RIG F   ++           P +S Y V      ++R  L          + +G  
Sbjct: 399  -LIRIGRFDRATELWESMANRGFYPSVSTYAVMIHGLCKKRGKLEEACRYFEIMIDEGIP 457

Query: 829  HILAAINC*KEYLLQLGFWEKIQILADKMLQSSSCSIQDLSQMM 960
               + +   +  LL LGF + I+ILA+KM +SSSCSIQ+L+  M
Sbjct: 458  PYSSTVELLRNRLLGLGFLDNIEILANKMARSSSCSIQELANAM 501


>ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Cucumis sativus]
          Length = 529

 Score =  263 bits (671), Expect = 1e-67
 Identities = 145/296 (48%), Positives = 184/296 (62%), Gaps = 11/296 (3%)
 Frame = +3

Query: 3    KPGIDDLDQLLYLLCKKKFVRFVQVLFDKIKFEFSPSAKTYRILMRGWCNVGILFMPGTY 182
            + G+DDLD+LLY LCK+K V   Q  FDK+K  F+PS KTY IL RGW  VG        
Sbjct: 183  RAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKTYSILTRGWGVVG----DSNN 238

Query: 183  LMKCSNEVVLWMW*RTIPVRIFVPTG*CRVG--------L*AISRDGFSWSQAECLYLIR 338
              K  +E+        +     +    C+ G           +  +G           IR
Sbjct: 239  AQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIR 298

Query: 339  FSFEASDVHSAMRVLDRTRRFNLEPNVFTYNCILKLLIKSQRVEDAYQILDEMVERGVNP 518
             S + +D+H+  RVL+RT+R NL PNVFTYNC++K L K Q VE+AYQILDEM+ERGV P
Sbjct: 299  SSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTP 358

Query: 519  DIWSYNVIQAFHCDHCEVNKADDW---SDGERWVLAGSAYLQLVLKMLIKVGRFDRTTAL 689
            D WSYN IQA+HCDH EVN A +     D ++ V     Y  +VLK+L++VGRFDR   +
Sbjct: 359  DTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTY-NMVLKLLVRVGRFDRANEV 417

Query: 690  WKGMADRGFYASVSTYAVMIHGQCKKKGRVEDACKYFEMMIDEGIPPYPCSYKLLK 857
            W+ M  RGFY SVSTYAVMIHG CKKK ++E+ACKYFEMMIDEGIPPY  + +LL+
Sbjct: 418  WESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLR 473


>ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Cucumis sativus]
          Length = 529

 Score =  263 bits (671), Expect = 1e-67
 Identities = 145/296 (48%), Positives = 184/296 (62%), Gaps = 11/296 (3%)
 Frame = +3

Query: 3    KPGIDDLDQLLYLLCKKKFVRFVQVLFDKIKFEFSPSAKTYRILMRGWCNVGILFMPGTY 182
            + G+DDLD+LLY LCK+K V   Q  FDK+K  F+PS KTY IL RGW  VG        
Sbjct: 183  RAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKTYSILTRGWGVVG----DSNN 238

Query: 183  LMKCSNEVVLWMW*RTIPVRIFVPTG*CRVG--------L*AISRDGFSWSQAECLYLIR 338
              K  +E+        +     +    C+ G           +  +G           IR
Sbjct: 239  AQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDADTYSIFIR 298

Query: 339  FSFEASDVHSAMRVLDRTRRFNLEPNVFTYNCILKLLIKSQRVEDAYQILDEMVERGVNP 518
             S + +D+H+  RVL+RT+R NL PNVFTYNC++K L K Q VE+AYQILDEM+ERGV P
Sbjct: 299  SSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDEMIERGVTP 358

Query: 519  DIWSYNVIQAFHCDHCEVNKADDW---SDGERWVLAGSAYLQLVLKMLIKVGRFDRTTAL 689
            D WSYN IQA+HCDH EVN A +     D ++ V     Y  +VLK+L++VGRFDR   +
Sbjct: 359  DTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTY-NMVLKLLVRVGRFDRANEV 417

Query: 690  WKGMADRGFYASVSTYAVMIHGQCKKKGRVEDACKYFEMMIDEGIPPYPCSYKLLK 857
            W+ M  RGFY SVSTYAVMIHG CKKK ++E+ACKYFEMMIDEGIPPY  + +LL+
Sbjct: 418  WESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVELLR 473


>ref|XP_007215907.1| hypothetical protein PRUPE_ppa004160mg [Prunus persica]
            gi|462412057|gb|EMJ17106.1| hypothetical protein
            PRUPE_ppa004160mg [Prunus persica]
          Length = 526

 Score =  261 bits (668), Expect = 2e-67
 Identities = 140/301 (46%), Positives = 185/301 (61%), Gaps = 16/301 (5%)
 Frame = +3

Query: 3    KPGIDDLDQLLYLLCKKKFVRFVQVLFDKIKFEFSPSAKTYRILMRGWCNVGILFMPGTY 182
            KP + DLDQL+Y LCK+K V++    FDK+K  F  +AK Y ILMRGW ++G        
Sbjct: 182  KPSVLDLDQLMYTLCKRKHVKYAHEFFDKVKSGFELNAKIYSILMRGWGDIG----DSDE 237

Query: 183  LMKCSNEVVLWMW*RTIPVRIFVPTG*CRVG--------L*AISRDGFSWSQAECLYLIR 338
              K  +E+        +P         C+ G           +  +G           IR
Sbjct: 238  ARKLFDEMTERGCLVDVPAYNSYLEALCKGGKVDEAYKIFRGMGSNGTDPDACTYSIFIR 297

Query: 339  FSFEASDVHSAMRVLDRTRRFNLEPNVFTYNCILKLLIKSQRVEDAYQILDEMVERGVNP 518
               EA+D+HS  RVLDR +R+NL PNV++YNCI+K L K+ +VE+AY++LDEM+ERGV P
Sbjct: 298  AYCEANDIHSVFRVLDRMKRYNLLPNVYSYNCIIKKLCKNDKVEEAYELLDEMIERGVMP 357

Query: 519  DIWSYNVIQAFHCDHCEVNKA--------DDWSDGERWVLAGSAYLQLVLKMLIKVGRFD 674
            D WSYN IQA HCDHCEVN+A         D    +R          +VLK+LI++GRFD
Sbjct: 358  DAWSYNAIQAHHCDHCEVNRALRLLSRMKKDNCKPDRHT------YNMVLKLLIRIGRFD 411

Query: 675  RTTALWKGMADRGFYASVSTYAVMIHGQCKKKGRVEDACKYFEMMIDEGIPPYPCSYKLL 854
            R T +W+ M +RGFY SVSTY+VMIHG CKKK ++E+ACKYFE+MIDEGIPPY  + ++L
Sbjct: 412  RATEVWESMGERGFYPSVSTYSVMIHGLCKKKHKLEEACKYFEIMIDEGIPPYFSTVEML 471

Query: 855  K 857
            K
Sbjct: 472  K 472



 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 72/268 (26%), Positives = 114/268 (42%), Gaps = 27/268 (10%)
 Frame = +1

Query: 238 LESLCRLGNAE*AYKLFQEMGSHGLKQNACT*FDF-----HSKPVMSIQP*EFLIEREGS 402
           LE+LC+ G  + AYK+F+ MGS+G   +ACT   F      +  + S+      ++R   
Sbjct: 261 LEALCKGGKVDEAYKIFRGMGSNGTDPDACTYSIFIRAYCEANDIHSVFRVLDRMKRYNL 320

Query: 403 IWSLMCLLIIAFSSC*LRAKGWKMRTKYLMKWLREVLIRIYGVTM*SKRSIVI------- 561
           + ++     I    C    K  K+   Y +  L E++ R       S  +I         
Sbjct: 321 LPNVYSYNCIIKKLC----KNDKVEEAYEL--LDEMIERGVMPDAWSYNAIQAHHCDHCE 374

Query: 562 IAKLIRLMIGRMEKDGCLPDRHTYNWCLKC*SK*EDLIEQRHCGKVWRIGDFTLQSQ--- 732
           + + +RL+  RM+KD C PDRHTYN  LK                + RIG F   ++   
Sbjct: 375 VNRALRLL-SRMKKDNCKPDRHTYNMVLKL---------------LIRIGRFDRATEVWE 418

Query: 733 --------PMLS*YMVS----ARRRAGLRMLVNTLR**LMKGFLHILAAINC*KEYLLQL 876
                   P +S Y V      +++  L          + +G     + +   K  L  L
Sbjct: 419 SMGERGFYPSVSTYSVMIHGLCKKKHKLEEACKYFEIMIDEGIPPYFSTVEMLKNRLRGL 478

Query: 877 GFWEKIQILADKMLQSSSCSIQDLSQMM 960
           G  E  +ILA KM QS+ CSIQ+++ +M
Sbjct: 479 GLLEHTEILASKMEQSTCCSIQEMANLM 506


>ref|XP_006465352.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Citrus sinensis]
          Length = 531

 Score =  261 bits (667), Expect = 3e-67
 Identities = 144/304 (47%), Positives = 188/304 (61%), Gaps = 19/304 (6%)
 Frame = +3

Query: 3    KPGIDDLDQLLYLLCKKKFVRFVQVLFDKIKFEFSPSAKTYRILMRGWCNVGILFMPGTY 182
            KP I DLDQLL+ LCK+K V+     FD +K E +P+ KTY IL+RG  +VG L    + 
Sbjct: 188  KPSIYDLDQLLHALCKRKHVKVAHQFFDNVKHEITPTVKTYSILVRGLGDVGEL----SE 243

Query: 183  LMKCSNEVVLWMW*RTIPVRIFVPTG*----CRVG-------------L*AISRDGFSWS 311
              K  +E++     R  PV I          C+ G                   D FS+S
Sbjct: 244  ARKLFDEMLE----RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 299

Query: 312  QAECLYLIRFSFEASDVHSAMRVLDRTRRFNLEPNVFTYNCILKLLIKSQRVEDAYQILD 491
                   I    EA+D+HS  RVLD  +R+NL PNVFTYNCI+K L K+++VE+AYQ+LD
Sbjct: 300  -----IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIKKLCKNEKVEEAYQLLD 354

Query: 492  EMVERGVNPDIWSYNVIQAFHCDHCEVNKADDWSD--GERWVLAGSAYLQLVLKMLIKVG 665
            EM+ERG NPD WSYN I A+HCDH EVN A        +  V+       +VLK+L++VG
Sbjct: 355  EMIERGANPDEWSYNAILAYHCDHAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 414

Query: 666  RFDRTTALWKGMADRGFYASVSTYAVMIHGQCKKKGRVEDACKYFEMMIDEGIPPYPCSY 845
            RFDR T +W+ M  RGFY SVSTY+VM+HG CKKKG++E+ACKYFEMM+DEGIPPY  + 
Sbjct: 415  RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 474

Query: 846  KLLK 857
            ++L+
Sbjct: 475  EMLR 478


>gb|EXB67320.1| hypothetical protein L484_025802 [Morus notabilis]
          Length = 529

 Score =  258 bits (660), Expect = 2e-66
 Identities = 142/304 (46%), Positives = 189/304 (62%), Gaps = 9/304 (2%)
 Frame = +3

Query: 3    KPGIDDLDQLLYLLCKKKFVRFVQVLFDKIKFEFSPSAKTYRILMRGWCNVGILFMPGTY 182
            KP + DLDQLLY LCK+K V+     FDK+K  F PS KT+ IL+RGW ++G      ++
Sbjct: 187  KPCVHDLDQLLYALCKRKHVKHAHEFFDKVKGGFEPSVKTFSILIRGWGDLG----DASH 242

Query: 183  LMKCSNEVVLWMW*RTIPVRIFVPTG*CRVG--------L*AISRDGFSWSQAECLYLIR 338
              +  +E++       +          C+ G           +   G S         IR
Sbjct: 243  ARELFDEMLQRGCFLDVLAYNSYLEALCKGGSADEAYEIFRGMKEKGVSPDACTYSVFIR 302

Query: 339  FSFEASDVHSAMRVLDRTRRFNLEPNVFTYNCILKLLIKSQRVEDAYQILDEMVERGVNP 518
               EA+D+HS  RVLDR RR++L PNVFTYN I+K L K+++V++AYQ+L+EM+E GV P
Sbjct: 303  TYCEANDIHSVFRVLDRMRRYDLLPNVFTYNLIIKKLCKNEKVDEAYQLLEEMIENGVRP 362

Query: 519  DIWSYNVIQAFHCDHCEVNKA-DDWSDGERWVLAGSAYLQLVLKMLIKVGRFDRTTALWK 695
            D WSYN I AFHCDHCEV++A    S  E+          +VLK+LI +GRFDR T +W+
Sbjct: 363  DSWSYNAILAFHCDHCEVHRALRLLSRMEKDCKPDRHTYNMVLKLLIGIGRFDRMTEVWE 422

Query: 696  GMADRGFYASVSTYAVMIHGQCKKKGRVEDACKYFEMMIDEGIPPYPCSYKLLKRISFAA 875
             MA +GFY SVSTYAVMIHG CKKKG++E+ACKYFE MIDEGIPPY  + ++L+      
Sbjct: 423  NMAVKGFYPSVSTYAVMIHGLCKKKGKLEEACKYFETMIDEGIPPYSTTVEMLRN----- 477

Query: 876  RILG 887
            R+LG
Sbjct: 478  RLLG 481


>ref|XP_006427239.1| hypothetical protein CICLE_v100269871mg, partial [Citrus
           clementina] gi|557529229|gb|ESR40479.1| hypothetical
           protein CICLE_v100269871mg, partial [Citrus clementina]
          Length = 436

 Score =  258 bits (658), Expect = 4e-66
 Identities = 143/304 (47%), Positives = 187/304 (61%), Gaps = 19/304 (6%)
 Frame = +3

Query: 3   KPGIDDLDQLLYLLCKKKFVRFVQVLFDKIKFEFSPSAKTYRILMRGWCNVGILFMPGTY 182
           KP I DLDQLL+ LCK+K V+     FD  K EF+P+ KTY IL+RG  +VG L    + 
Sbjct: 93  KPSIYDLDQLLHALCKRKHVKVAHQFFDNAKHEFTPTVKTYSILVRGLGDVGEL----SE 148

Query: 183 LMKCSNEVVLWMW*RTIPVRIFVPTG*----CRVG-------------L*AISRDGFSWS 311
             K  +E++     R  PV I          C+ G                   D FS+S
Sbjct: 149 ARKLFDEMLE----RKCPVDILAHNSLLEAMCKAGNIDEAHGMLREMRSIGAEPDAFSYS 204

Query: 312 QAECLYLIRFSFEASDVHSAMRVLDRTRRFNLEPNVFTYNCILKLLIKSQRVEDAYQILD 491
                  I    EA+D+HS  RVLD  +R+NL PNVFTYNCI++ L K+++VE+AYQ+LD
Sbjct: 205 -----IFIHAFCEANDIHSVFRVLDSMKRYNLVPNVFTYNCIIRKLCKNEKVEEAYQLLD 259

Query: 492 EMVERGVNPDIWSYNVIQAFHCDHCEVNKADDWSD--GERWVLAGSAYLQLVLKMLIKVG 665
           EM+ERG NPD WSYN I A+HCD  EVN A        +  V+       +VLK+L++VG
Sbjct: 260 EMIERGANPDEWSYNAILAYHCDRAEVNMALRLITRMTKENVMPDRHTYNMVLKLLVRVG 319

Query: 666 RFDRTTALWKGMADRGFYASVSTYAVMIHGQCKKKGRVEDACKYFEMMIDEGIPPYPCSY 845
           RFDR T +W+ M  RGFY SVSTY+VM+HG CKKKG++E+ACKYFEMM+DEGIPPY  + 
Sbjct: 320 RFDRATEVWESMEKRGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMVDEGIPPYSSTV 379

Query: 846 KLLK 857
           ++L+
Sbjct: 380 EMLR 383


>ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Glycine max]
          Length = 523

 Score =  255 bits (651), Expect = 2e-65
 Identities = 144/314 (45%), Positives = 193/314 (61%), Gaps = 19/314 (6%)
 Frame = +3

Query: 3    KPGIDDLDQLLYLLCKKKFVRFVQVLFDKIKFEFSPSAKTYRILMRGWCNVGILFMPGTY 182
            KP I DLD+LL++LCK+K V+  Q LF + K  FS +AKTY IL+ GW  +G        
Sbjct: 179  KPTIHDLDKLLFILCKRKHVKQAQQLFHQAKNRFSLTAKTYSILISGWGEIGD------- 231

Query: 183  LMKCSNEVVLWMW*RTIPVRIFVPTG*----CRVGL*-------------AISRDGFSWS 311
              + + ++   M  +  PV +          C+ G                +  D F++S
Sbjct: 232  -SEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDAFTYS 290

Query: 312  QAECLYLIRFSFEASDVHSAMRVLDRTRRFNLEPNVFTYNCILKLLIKSQRVEDAYQILD 491
                   I    +A DV SA RVLD+ RR+NL PNVFTYNCI+K L K++ VE+AYQ+LD
Sbjct: 291  -----IFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLLD 345

Query: 492  EMVERGVNPDIWSYNVIQAFHCDHCEVNKADD--WSDGERWVLAGSAYLQLVLKMLIKVG 665
            EM+ RGV PD WSYN IQA+HCDHCEVN+A    +   +   L       +VLK+LI++G
Sbjct: 346  EMISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICLPDRHTYNMVLKLLIRIG 405

Query: 666  RFDRTTALWKGMADRGFYASVSTYAVMIHGQCKKKGRVEDACKYFEMMIDEGIPPYPCSY 845
            RFD+ T +W+ M D+ FY SVSTY+VMIHG CKKKG++E+ACKYFEMMIDEGIPPY  + 
Sbjct: 406  RFDKVTEVWENMVDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTV 465

Query: 846  KLLKRISFAARILG 887
            ++L+      R+LG
Sbjct: 466  EMLRN-----RLLG 474



 Score = 59.3 bits (142), Expect = 2e-06
 Identities = 47/139 (33%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
 Frame = +1

Query: 562 IAKLIRLMIGRMEKDGCLPDRHTYNWCLKC*SK*EDLIEQRHCGKVWRIGDFTLQSQ--P 735
           + + +RLM  RMEKD CLPDRHTYN  LK       LI      KV  + +  +  +  P
Sbjct: 372 VNRALRLMF-RMEKDICLPDRHTYNMVLKL------LIRIGRFDKVTEVWENMVDKKFYP 424

Query: 736 MLS*YMVS----ARRRAGLRMLVNTLR**LMKGFLHILAAINC*KEYLLQLGFWEKIQIL 903
            +S Y V      +++  L          + +G    +  +   +  LL LGF + I+IL
Sbjct: 425 SVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEMLRNRLLGLGFIDHIEIL 484

Query: 904 ADKMLQSSSCSIQDLSQMM 960
           A KM QS+S +IQ+L+ +M
Sbjct: 485 AAKMRQSTSYAIQELANIM 503


>ref|XP_002305285.2| pentatricopeptide repeat-containing family protein [Populus
            trichocarpa] gi|550340729|gb|EEE85796.2|
            pentatricopeptide repeat-containing family protein
            [Populus trichocarpa]
          Length = 523

 Score =  254 bits (649), Expect = 4e-65
 Identities = 134/295 (45%), Positives = 184/295 (62%), Gaps = 10/295 (3%)
 Frame = +3

Query: 3    KPGIDDLDQLLYLLCKKKFVRFVQVLFDKIKFEFSPSAKTYRILMRGWCNVGILFMPGTY 182
            +P +DDLD+LLY+LCK K V+  Q  FD++K +F   AKTY IL+RGW ++G        
Sbjct: 180  RPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHKFEAKAKTYSILVRGWGDIG----EAVE 235

Query: 183  LMKCSNEVVLWMW*RTIPVRIFVPTG*CRVG--------L*AISRDGFSWSQAECLYLIR 338
              K  +E++       +     +    C+ G           I   G           IR
Sbjct: 236  ARKVFDEMLGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIFIR 295

Query: 339  FSFEASDVHSAMRVLDRTRRFNLEPNVFTYNCILKLLIKSQRVEDAYQILDEMVERGVNP 518
               EA+++HS   VLDR +R++L PNVFTYNCI+K L K+ +VEDAYQ+L EM+ERGV+P
Sbjct: 296  AYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHEMMERGVSP 355

Query: 519  DIWSYNVIQAFHCDHCEVNKADDWSD--GERWVLAGSAYLQLVLKMLIKVGRFDRTTALW 692
            D WSYN I A+HC+H EVN+A        +   L       ++LK+L++VGRFDR T +W
Sbjct: 356  DAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGRFDRATEIW 415

Query: 693  KGMADRGFYASVSTYAVMIHGQCKKKGRVEDACKYFEMMIDEGIPPYPCSYKLLK 857
            + M +RGFY SVSTY+VMIHG CKKKG++E+AC+YFE MIDEGIPPY  + ++L+
Sbjct: 416  ESMGERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPPYASTIEMLR 470



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 72/272 (26%), Positives = 119/272 (43%), Gaps = 30/272 (11%)
 Frame = +1

Query: 235 LLESLCRLGNAE*AYKLFQEMGSHGLKQNACT*FDF-----HSKPVMSIQP*EFLIEREG 399
           LLE+LC+ GN + AYK+F+E+GSHG++ +AC+   F      +  + S+      ++R  
Sbjct: 258 LLEALCKGGNVDEAYKMFREIGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYD 317

Query: 400 SIWSLMCLLIIAFSSC*LRAKGWKMRTKYLMKWLREVLIRIYGVTM*SKRSIVII----- 564
            + ++     I    C    K  K+   Y +  L E++ R       S  +I+       
Sbjct: 318 LVPNVFTYNCIIKKLC----KNGKVEDAYQL--LHEMMERGVSPDAWSYNTILAYHCEHS 371

Query: 565 -----AKLIRLMIGRMEKDGCLPDRHTYNWCLKC*SK*EDLIEQRHCGKVWRIGDFTLQS 729
                 KLI +M+    KD CLPDRH+YN  LK                + R+G F   +
Sbjct: 372 EVNRATKLISIMV----KDNCLPDRHSYNMLLKL---------------LVRVGRFDRAT 412

Query: 730 Q-----------PMLS*YMVS----ARRRAGLRMLVNTLR**LMKGFLHILAAINC*KEY 864
           +           P +S Y V      +++  L          + +G     + I   +  
Sbjct: 413 EIWESMGERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPPYASTIEMLRNR 472

Query: 865 LLQLGFWEKIQILADKMLQSSSCSIQDLSQMM 960
           L+  G  + I+ILA KM + +SCSIQ+L++ M
Sbjct: 473 LIGFGLLDHIEILACKMERGTSCSIQELAKEM 504


>ref|XP_007144700.1| hypothetical protein PHAVU_007G177800g [Phaseolus vulgaris]
            gi|561017890|gb|ESW16694.1| hypothetical protein
            PHAVU_007G177800g [Phaseolus vulgaris]
          Length = 524

 Score =  253 bits (645), Expect = 1e-64
 Identities = 142/313 (45%), Positives = 192/313 (61%), Gaps = 19/313 (6%)
 Frame = +3

Query: 6    PGIDDLDQLLYLLCKKKFVRFVQVLFDKIKFEFSPSAKTYRILMRGWCNVGILFMPGTYL 185
            P + DLD+LLY LCK+K ++  Q  FDK K  FS SAKTY IL+ GW  +G         
Sbjct: 180  PTVHDLDKLLYFLCKRKHLKQAQQFFDKAKNRFSLSAKTYSILISGWGEIGD-------- 231

Query: 186  MKCSNEVVLWMW*RTIPVRIFVPTG*----CRVG-------------L*AISRDGFSWSQ 314
                +E+   M  +  P+ +          C+ G             L  +  D F++S 
Sbjct: 232  SDKVHELFEAMLGQGCPLDLLAYNNLLGALCKSGCVDEAKKFFHDMLLKGVEPDAFTYS- 290

Query: 315  AECLYLIRFSFEASDVHSAMRVLDRTRRFNLEPNVFTYNCILKLLIKSQRVEDAYQILDE 494
                  I F   A++V SA RVLD+ +R+NL PNVFTYNCI+K L K++ VE+AYQ+LDE
Sbjct: 291  ----IFIHFYCNANNVQSAFRVLDKMKRYNLLPNVFTYNCIIKRLCKNELVEEAYQLLDE 346

Query: 495  MVERGVNPDIWSYNVIQAFHCDHCEVNKADD--WSDGERWVLAGSAYLQLVLKMLIKVGR 668
            M+  GV PDIWSYN IQA+HCDHCEVN+A    +   +   L       +VLK+LI++GR
Sbjct: 347  MISIGVKPDIWSYNAIQAYHCDHCEVNRALRLMFRMEKDNCLPDRHTYNMVLKLLIRIGR 406

Query: 669  FDRTTALWKGMADRGFYASVSTYAVMIHGQCKKKGRVEDACKYFEMMIDEGIPPYPCSYK 848
            FD+ T +W+ M ++ F+ SVSTY+V+IHG CKKKG++E+ACKYFEMMIDEGIPPY  + +
Sbjct: 407  FDKVTEVWENMVNKSFFPSVSTYSVLIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVE 466

Query: 849  LLKRISFAARILG 887
            LL+      R+LG
Sbjct: 467  LLRN-----RLLG 474



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 47/139 (33%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
 Frame = +1

Query: 562 IAKLIRLMIGRMEKDGCLPDRHTYNWCLKC*SK*EDLIEQRHCGKVWRIGDFTLQSQ--P 735
           + + +RLM  RMEKD CLPDRHTYN  LK       LI      KV  + +  +     P
Sbjct: 372 VNRALRLMF-RMEKDNCLPDRHTYNMVLKL------LIRIGRFDKVTEVWENMVNKSFFP 424

Query: 736 MLS*YMVS----ARRRAGLRMLVNTLR**LMKGFLHILAAINC*KEYLLQLGFWEKIQIL 903
            +S Y V      +++  L          + +G    +  +   +  LL LG  + I+IL
Sbjct: 425 SVSTYSVLIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVELLRNRLLGLGLLDHIEIL 484

Query: 904 ADKMLQSSSCSIQDLSQMM 960
            DKM QSSS +IQ+L+ +M
Sbjct: 485 IDKMRQSSSHAIQELANIM 503


>ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223529547|gb|EEF31500.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 519

 Score =  253 bits (645), Expect = 1e-64
 Identities = 136/302 (45%), Positives = 188/302 (62%), Gaps = 17/302 (5%)
 Frame = +3

Query: 3    KPGIDDLDQLLYLLCKKKFVRFVQVLFDKIKFEFSPSAKTYRILMRGWCNVGILFMPGTY 182
            KP IDDLDQLLY+LCK+K  +  Q +FD++K +F   AKTY IL+RGW ++G        
Sbjct: 176  KPTIDDLDQLLYVLCKRKHAKHAQQIFDRVKHQFQTRAKTYSILVRGWGDIGESVSACKV 235

Query: 183  L-----MKCSNEVVLWMW*RTIPVRIFVPTG*C--------RVGL*AISRDGFSWSQAEC 323
                   +C+ +V+ +       +  F   G           +G   I  D  ++S    
Sbjct: 236  FDEMREQQCAVDVLAY----NSLLEAFCKGGKVSEAYKMFREMGSNGIKPDACTFS---- 287

Query: 324  LYLIRFSFEASDVHSAMRVLDRTRRFNLEPNVFTYNCILKLLIKSQRVEDAYQILDEMVE 503
               IR   EA+D+H A RVLD  +R++L PNVFTYNC++K L K ++VE+AYQ+L+E++E
Sbjct: 288  -IFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIE 346

Query: 504  RGVNPDIWSYNVIQAFHCDHCEVNKADDWSDGERWV----LAGSAYLQLVLKMLIKVGRF 671
            R   PD WSYN I A+HC+H EVN A       R V    L       ++LK+LI+VGRF
Sbjct: 347  RSGQPDAWSYNAILAYHCEHSEVNSATRLIS--RMVKDNCLPDKHSYNMLLKLLIRVGRF 404

Query: 672  DRTTALWKGMADRGFYASVSTYAVMIHGQCKKKGRVEDACKYFEMMIDEGIPPYPCSYKL 851
            DR   +W+ M ++GFY SVSTY+VM+HG CKKKG++E+ACKYFEMMIDEGIPPY  + ++
Sbjct: 405  DRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMIDEGIPPYSSTVEI 464

Query: 852  LK 857
            L+
Sbjct: 465  LR 466



 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 64/254 (25%), Positives = 108/254 (42%), Gaps = 12/254 (4%)
 Frame = +1

Query: 235 LLESLCRLGNAE*AYKLFQEMGSHGLKQNACT*FDFHSKPVMSIQP*EFLIEREGSIWSL 414
           LLE+ C+ G    AYK+F+EMGS+G+K +ACT F    +                 +   
Sbjct: 254 LLEAFCKGGKVSEAYKMFREMGSNGIKPDACT-FSIFIRAYCEANDIHLAYRVLDEMKRY 312

Query: 415 MCLLIIAFSSC*LRAKGWKMRTKYLMKWLREVLIRIYGVTM*SKRSIVII------AKLI 576
             +  +   +C ++    K + +   + L E++ R       S  +I+            
Sbjct: 313 DLVPNVFTYNCMIKKLCKKEKVEEAYQLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSA 372

Query: 577 RLMIGRMEKDGCLPDRHTYNWCLKC*SK*EDLIEQRHCGKVWRIGDFTLQS--QPMLS*Y 750
             +I RM KD CLPD+H+YN  LK       LI      +   + +   +    P +S Y
Sbjct: 373 TRLISRMVKDNCLPDKHSYNMLLKL------LIRVGRFDRAIEVWESMGEKGFYPSVSTY 426

Query: 751 MVSA----RRRAGLRMLVNTLR**LMKGFLHILAAINC*KEYLLQLGFWEKIQILADKML 918
            V      +++  L          + +G     + +   +  L+ LG  + I+ILA KM 
Sbjct: 427 SVMVHGLCKKKGKLEEACKYFEMMIDEGIPPYSSTVEILRNRLIGLGLLDYIEILAGKME 486

Query: 919 QSSSCSIQDLSQMM 960
            S++CSIQ+L+  M
Sbjct: 487 HSTACSIQELAIAM 500


>ref|XP_004305328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 734

 Score =  251 bits (642), Expect = 3e-64
 Identities = 141/306 (46%), Positives = 184/306 (60%), Gaps = 11/306 (3%)
 Frame = +3

Query: 3    KPGIDDLDQLLYLLCKKKFVRFVQVLFDKIKFEFSPSAKTYRILMRGWCNVGILFMPGTY 182
            KP I DLD LLY LCK+K V+  Q  FDK+K  F   AKTY ILMRGW ++         
Sbjct: 320  KPSIHDLDHLLYTLCKRKHVKHAQEFFDKVKSGFELGAKTYSILMRGWGDI----CDSDN 375

Query: 183  LMKCSNEVVLWMW*RTIPVRIFVPTG*CRVG--------L*AISRDGFSWSQAECLYLIR 338
              K  +E+        +P         C+ G           +   G           IR
Sbjct: 376  ARKLFDEMTEKGCLVDVPAYNSYLEALCKGGNVDEAYKIFREMGSKGVEPDAGTYSIFIR 435

Query: 339  FSFEASDVHSAMRVLDRTRRFNLEPNVFTYNCILKLLIKSQRVEDAYQILDEMVERGVNP 518
               EA+D+HS   VLDR +R+NL  NVFTYNC++K L K++RVE+AYQ+LDEM+E GV P
Sbjct: 436  AYCEANDIHSVFSVLDRMKRYNLLANVFTYNCVIKKLCKNERVEEAYQLLDEMIEMGVKP 495

Query: 519  DIWSYNVIQAFHCDHCEVNKA---DDWSDGERWVLAGSAYLQLVLKMLIKVGRFDRTTAL 689
            D WSYN IQA+HC+H EVN+A       + +  +     Y  +VLK+LI++GRFDR T +
Sbjct: 496  DEWSYNAIQAYHCEHGEVNQALRLLSRMEKDSCMPDHHTY-NMVLKLLIRIGRFDRATDV 554

Query: 690  WKGMADRGFYASVSTYAVMIHGQCKKKGRVEDACKYFEMMIDEGIPPYPCSYKLLKRISF 869
            W+ M  RGFY SVSTY+VMIHG CKKK ++E+ACKYFE+MIDEGIPPY  + ++L+    
Sbjct: 555  WERMGKRGFYPSVSTYSVMIHGLCKKKHKLEEACKYFEIMIDEGIPPYSSTVEMLRN--- 611

Query: 870  AARILG 887
              R+LG
Sbjct: 612  --RLLG 615



 Score = 60.8 bits (146), Expect = 8e-07
 Identities = 71/259 (27%), Positives = 115/259 (44%), Gaps = 20/259 (7%)
 Frame = +1

Query: 238  LESLCRLGNAE*AYKLFQEMGSHGLKQNA----------CT*FDFHSKPVMSIQP*EFLI 387
            LE+LC+ GN + AYK+F+EMGS G++ +A          C   D HS  V S+       
Sbjct: 399  LEALCKGGNVDEAYKIFREMGSKGVEPDAGTYSIFIRAYCEANDIHS--VFSVLDRMKRY 456

Query: 388  EREGSIWSLMCLLIIAFSSC*LRAKGWKMRTKY-LMKWLREVLIR----IYGVTM*SKRS 552
                ++++  C++           K  ++   Y L+  + E+ ++     Y         
Sbjct: 457  NLLANVFTYNCVIKKL-------CKNERVEEAYQLLDEMIEMGVKPDEWSYNAIQAYHCE 509

Query: 553  IVIIAKLIRLMIGRMEKDGCLPDRHTYNWCLKC*SK*EDLIEQRHCGKVW-RIGDFTLQS 729
               + + +RL+  RMEKD C+PD HTYN  LK   +   +        VW R+G      
Sbjct: 510  HGEVNQALRLL-SRMEKDSCMPDHHTYNMVLKLLIR---IGRFDRATDVWERMGKRGFY- 564

Query: 730  QPMLS*YMVS----ARRRAGLRMLVNTLR**LMKGFLHILAAINC*KEYLLQLGFWEKIQ 897
             P +S Y V      +++  L          + +G     + +   +  LL LG  + I+
Sbjct: 565  -PSVSTYSVMIHGLCKKKHKLEEACKYFEIMIDEGIPPYSSTVEMLRNRLLGLGLLDDIE 623

Query: 898  ILADKMLQSSSCSIQDLSQ 954
            ILA KM QSSSCS Q+ ++
Sbjct: 624  ILARKMEQSSSCSTQEFAK 642


>ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Glycine max]
          Length = 523

 Score =  251 bits (641), Expect = 3e-64
 Identities = 138/304 (45%), Positives = 188/304 (61%), Gaps = 19/304 (6%)
 Frame = +3

Query: 3    KPGIDDLDQLLYLLCKKKFVRFVQVLFDKIKFEFSPSAKTYRILMRGWCNVGILFMPGTY 182
            KP I+D D+LL++LCK K V+  Q  FD+ K  F  +AKTY IL+ GW ++G        
Sbjct: 179  KPTINDFDKLLFILCKTKHVKQAQQFFDQAKNRFLLTAKTYSILISGWGDIGD------- 231

Query: 183  LMKCSNEVVLWMW*RTIPVRIFVPTG*----CRVGL*-------------AISRDGFSWS 311
              + ++E+   M  +  PV +          C+ G                +  D F++S
Sbjct: 232  -SEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEAKTIFHDMLSKRVEPDAFTYS 290

Query: 312  QAECLYLIRFSFEASDVHSAMRVLDRTRRFNLEPNVFTYNCILKLLIKSQRVEDAYQILD 491
                   I    +A DV SA+RVLD+ RR+N+ PNVFTYNCI+K L K++ VE+AY +LD
Sbjct: 291  -----IFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIKRLCKNEHVEEAYLLLD 345

Query: 492  EMVERGVNPDIWSYNVIQAFHCDHCEVNKADD--WSDGERWVLAGSAYLQLVLKMLIKVG 665
            EM+ RGV PD WSYN IQA+HCDHCEVN+A    +   +   L       +VLK+LI++G
Sbjct: 346  EMISRGVRPDTWSYNAIQAYHCDHCEVNRAIRLMFRMEKDNCLPDRHTYNMVLKLLIRIG 405

Query: 666  RFDRTTALWKGMADRGFYASVSTYAVMIHGQCKKKGRVEDACKYFEMMIDEGIPPYPCSY 845
            RFD+ T +W  M D+ FY SVSTY+VMIHG CKKKG++E+ACKYFEMMIDEGIPPY  + 
Sbjct: 406  RFDKVTKVWGNMGDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTV 465

Query: 846  KLLK 857
            ++L+
Sbjct: 466  EMLR 469



 Score = 61.2 bits (147), Expect = 6e-07
 Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 5/138 (3%)
 Frame = +1

Query: 562 IAKLIRLMIGRMEKDGCLPDRHTYNWCLKC*SK*EDLIEQRHCGKVW-RIGDFTLQSQPM 738
           + + IRLM  RMEKD CLPDRHTYN  LK   +   +       KVW  +GD   +  P 
Sbjct: 372 VNRAIRLMF-RMEKDNCLPDRHTYNMVLKLLIR---IGRFDKVTKVWGNMGD--KKFYPS 425

Query: 739 LS*YMVS----ARRRAGLRMLVNTLR**LMKGFLHILAAINC*KEYLLQLGFWEKIQILA 906
           +S Y V      +++  L          + +G    +  +   +  LL LGF + I+ILA
Sbjct: 426 VSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVEMLRNQLLGLGFLDHIEILA 485

Query: 907 DKMLQSSSCSIQDLSQMM 960
            KM QS+S +IQ+L+ +M
Sbjct: 486 AKMRQSTSYAIQELANIM 503


>ref|XP_006392896.1| hypothetical protein EUTSA_v10011389mg [Eutrema salsugineum]
            gi|557089474|gb|ESQ30182.1| hypothetical protein
            EUTSA_v10011389mg [Eutrema salsugineum]
          Length = 523

 Score =  248 bits (633), Expect = 3e-63
 Identities = 136/308 (44%), Positives = 188/308 (61%), Gaps = 23/308 (7%)
 Frame = +3

Query: 3    KPGIDDLDQLLYLLCKKKFVRFVQVLFDKIKFEFSPSAKTYRILMRGW------------ 146
            KP +DDLDQLL+ LC +K V   Q  FD+ K   +PSAKTY IL+RGW            
Sbjct: 170  KPCVDDLDQLLHSLCDRKHVNHAQDFFDRAKAGIAPSAKTYSILVRGWARIRDASGARKV 229

Query: 147  --------CNVGILFMPGTYLMKCSNEVVLWMW*RTIPVRIFVPTG*CRVGL*AISRDGF 302
                    C V +L    +    C +  V   +      ++F   G   +GL     D +
Sbjct: 230  FDEMLETNCPVDLLAYNASLDALCKSGDVDGAY------KMFQEMG--NLGL---EPDAY 278

Query: 303  SWSQAECLYLIRFSFEASDVHSAMRVLDRTRRFNLEPNVFTYNCILKLLIKSQRVEDAYQ 482
            S++       I    +A DVHSA +VLDR +R+ L PNV+TYN I+K L K +RV+DAY 
Sbjct: 279  SYA-----IFIHAYCDADDVHSAYKVLDRMQRYELVPNVYTYNHIIKTLCKKERVDDAYL 333

Query: 483  ILDEMVERGVNPDIWSYNVIQAFHCDHCEVNKAD---DWSDGERWVLAGSAYLQLVLKML 653
            +LDEM++RG NPD W+YN I A+HCDHCEVN+A       D  + +     Y  +VLK+L
Sbjct: 334  LLDEMIQRGANPDTWTYNSIMAYHCDHCEVNRATKLISRMDRTKCLPDRHTY-NMVLKLL 392

Query: 654  IKVGRFDRTTALWKGMADRGFYASVSTYAVMIHGQCKKKGRVEDACKYFEMMIDEGIPPY 833
            I++GRFDR T +W+GM++R FY +V+TY VMIHG  +KKG++E+AC+YFEMMID+GIPPY
Sbjct: 393  IRIGRFDRVTEMWEGMSEREFYPTVATYTVMIHGLVRKKGKIEEACRYFEMMIDDGIPPY 452

Query: 834  PCSYKLLK 857
              + ++L+
Sbjct: 453  STTVEMLR 460


>ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355524756|gb|AET05210.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 520

 Score =  247 bits (630), Expect = 6e-63
 Identities = 143/310 (46%), Positives = 191/310 (61%), Gaps = 15/310 (4%)
 Frame = +3

Query: 3    KPGIDDLDQLLYLLCKKKFVRFVQVLFDKIKFEFSPSAKTYRILMRGWCNVG-------- 158
            KP I D+D LLY LCKKK VR  Q  FD++K  F  + KTY IL+ GW  +G        
Sbjct: 176  KPSIIDVDLLLYTLCKKKHVRQAQQFFDQVKSHFLLTTKTYSILINGWGKIGDSGKAREL 235

Query: 159  --ILFMPGTY--LMKCSNEV-VLWMW*RTIPVRIFVPTG*CRVGL*AISRDGFSWSQAEC 323
               +   G +  L+  +N +  L           F+     +     +  D F++S    
Sbjct: 236  FDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSK----KVEPDAFTYS---- 287

Query: 324  LYLIRFSFEASDVHSAMRVLDRTRRFNLEPNVFTYNCILKLLIKSQRVEDAYQILDEMVE 503
               IR   +A++VHSA  VLD+ RR NL PNVFTYNCI+K L K ++VE+AYQ+LDEM+ 
Sbjct: 288  -IFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLDEMIS 346

Query: 504  RGVNPDIWSYNVIQAFHCDHCEVNKADDW-SDGERWVLAGSAY-LQLVLKMLIKVGRFDR 677
             G+ PD WSYN IQA+HCDHCEVN+A    S  E+ V     +   +VLK+LI++GRFD+
Sbjct: 347  SGLKPDTWSYNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVLKLLIRIGRFDK 406

Query: 678  TTALWKGMADRGFYASVSTYAVMIHGQCKKKGRVEDACKYFEMMIDEGIPPYPCSYKLLK 857
             T +W+ M D+ FY SVSTY+VMIHG CKKKG++E+ACKYF MMIDEGIPPY  + ++L+
Sbjct: 407  ATEVWECMGDKKFYPSVSTYSVMIHGLCKKKGKLEEACKYFAMMIDEGIPPYDTTIEMLR 466

Query: 858  RISFAARILG 887
                  R+LG
Sbjct: 467  N-----RLLG 471



 Score = 58.2 bits (139), Expect = 5e-06
 Identities = 49/134 (36%), Positives = 65/134 (48%), Gaps = 8/134 (5%)
 Frame = +1

Query: 583 MIGRMEKDGCLPDRHTYNWCLKC*SK*EDLIEQRHCGK---VWR-IGDFTLQSQPMLS*Y 750
           +I RMEKD C PDRHTYN  LK       LI      K   VW  +GD   +  P +S Y
Sbjct: 375 LISRMEKDVCFPDRHTYNMVLKL------LIRIGRFDKATEVWECMGD--KKFYPSVSTY 426

Query: 751 MVS----ARRRAGLRMLVNTLR**LMKGFLHILAAINC*KEYLLQLGFWEKIQILADKML 918
            V      +++  L          + +G       I   +  LL LG  + I+ILA KM 
Sbjct: 427 SVMIHGLCKKKGKLEEACKYFAMMIDEGIPPYDTTIEMLRNRLLGLGLLDNIEILAAKMR 486

Query: 919 QSSSCSIQDLSQMM 960
           QS+SCSIQ+L+ +M
Sbjct: 487 QSTSCSIQELANIM 500


>ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297340234|gb|EFH70651.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 525

 Score =  244 bits (623), Expect = 4e-62
 Identities = 137/309 (44%), Positives = 190/309 (61%), Gaps = 24/309 (7%)
 Frame = +3

Query: 3    KPGIDDLDQLLYLLCKKKFVRFVQVLFDKIK-FEFSPSAKTYRILMRGW----------- 146
            KP +DDLDQLL+ LC +K V   Q  FDK K F   PSAKTY IL+RGW           
Sbjct: 170  KPCVDDLDQLLHSLCDRKHVNHAQEFFDKAKGFGIVPSAKTYSILVRGWARIRDASGARK 229

Query: 147  ---------CNVGILFMPGTYLMKCSNEVVLWMW*RTIPVRIFVPTG*CRVGL*AISRDG 299
                     C V +L         C +  V   +      ++F   G   +GL     D 
Sbjct: 230  VFDEMLENNCVVDLLAYNALLDALCKSGDVDGAY------KMFQEMG--NLGL---KPDA 278

Query: 300  FSWSQAECLYLIRFSFEASDVHSAMRVLDRTRRFNLEPNVFTYNCILKLLIKSQRVEDAY 479
            +S++       I    +ASDVHSA +VLDR +R++L PNV+T+N I+K L K+++V+DAY
Sbjct: 279  YSFA-----IFIHSYCDASDVHSAYQVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAY 333

Query: 480  QILDEMVERGVNPDIWSYNVIQAFHCDHCEVNKAD---DWSDGERWVLAGSAYLQLVLKM 650
             +LDEM+++G NPD W+YN I A+HCDHCEVN+A       D  + +     Y  +VLK+
Sbjct: 334  LLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTY-NMVLKL 392

Query: 651  LIKVGRFDRTTALWKGMADRGFYASVSTYAVMIHGQCKKKGRVEDACKYFEMMIDEGIPP 830
            LI++GRFDR T +W+GM++R FY +V+TY VMIHG  +KKG++E+AC+YFEMMIDEGIPP
Sbjct: 393  LIRIGRFDRVTEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPP 452

Query: 831  YPCSYKLLK 857
            Y  + ++L+
Sbjct: 453  YSTTVEMLR 461


>ref|XP_004503476.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like isoform X1 [Cicer arietinum]
          Length = 524

 Score =  244 bits (622), Expect = 5e-62
 Identities = 142/321 (44%), Positives = 191/321 (59%), Gaps = 26/321 (8%)
 Frame = +3

Query: 3    KPGIDDLDQLLYLLCKKKFVRFVQVLFDKIKFEFSPSAKTYRILMRGWCNVGILFMPGTY 182
            +P I+D D LLY+LCK+K V+  Q  FD+ K  F  +AKTY IL+ GW   G +   G  
Sbjct: 180  EPCINDFDMLLYILCKRKHVKQAQQFFDQAKNRFLLTAKTYSILICGW---GKIADSGK- 235

Query: 183  LMKCSNEVVLWMW*RTIPVRIFVPTG*----CRVG-------------L*AISRDGFSWS 311
                + EV   M  +  PV +          C+ G                +  D F++S
Sbjct: 236  ----AREVFEEMVEQGCPVDLLAYNNLLESLCKGGNVDEAMNLFHDMLSKRVEVDAFTYS 291

Query: 312  QAECLYLIRFSFEASDVHSAMRVLDRTRRFNLEPNVFTYNCILKLLIKSQRVEDAYQILD 491
                   IR    A+D+HSA RVLD+ +R NL PNVFTYNCI+K L K++ VE+AY++LD
Sbjct: 292  -----IFIRSHCVANDMHSAFRVLDQMKRCNLLPNVFTYNCIIKRLCKNKMVEEAYELLD 346

Query: 492  EMVERGVNPDIWSYNVIQAFHCDHCEVNKA---------DDWSDGERWVLAGSAYLQLVL 644
            EM+  G+ PD WSYN IQA+HCDHCEVN+A         DD        L       LVL
Sbjct: 347  EMISSGLKPDTWSYNAIQAYHCDHCEVNRALRLMSRMEKDD-------CLPDRHTYNLVL 399

Query: 645  KMLIKVGRFDRTTALWKGMADRGFYASVSTYAVMIHGQCKKKGRVEDACKYFEMMIDEGI 824
            K+LI++GRFD+ T +W+ M D+ FY SVSTY+VMIHG CKKKG++E+AC+YFE+M+DEGI
Sbjct: 400  KLLIRIGRFDKVTEVWENMGDKKFYPSVSTYSVMIHGFCKKKGKLEEACRYFEIMVDEGI 459

Query: 825  PPYPCSYKLLKRISFAARILG 887
            PPY  + ++L+      R+LG
Sbjct: 460  PPYVTTIEMLRN-----RLLG 475



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 49/139 (35%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
 Frame = +1

Query: 562 IAKLIRLMIGRMEKDGCLPDRHTYNWCLKC*SK*EDLIEQRHCGKVWRIGDFTLQSQ--P 735
           + + +RLM  RMEKD CLPDRHTYN  LK       LI      KV  + +     +  P
Sbjct: 373 VNRALRLM-SRMEKDDCLPDRHTYNLVLKL------LIRIGRFDKVTEVWENMGDKKFYP 425

Query: 736 MLS*YMVS----ARRRAGLRMLVNTLR**LMKGFLHILAAINC*KEYLLQLGFWEKIQIL 903
            +S Y V      +++  L          + +G    +  I   +  LL LG  + I+IL
Sbjct: 426 SVSTYSVMIHGFCKKKGKLEEACRYFEIMVDEGIPPYVTTIEMLRNRLLGLGLLDNIEIL 485

Query: 904 ADKMLQSSSCSIQDLSQMM 960
           A+KM QS+SCSIQ+L+ +M
Sbjct: 486 ANKMRQSTSCSIQELANIM 504


>ref|XP_006364201.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
            mitochondrial-like [Solanum tuberosum]
          Length = 550

 Score =  243 bits (619), Expect = 1e-61
 Identities = 132/287 (45%), Positives = 178/287 (62%), Gaps = 10/287 (3%)
 Frame = +3

Query: 3    KPGIDDLDQLLYLLCKKKFVRFVQVLFDKIKFEFSPSAKTYRILMRGWCNVGILFMPGTY 182
            KP + DLD+LL  LCK+K  +  Q  FDK+K +F PS KTY IL+RGW ++G +      
Sbjct: 205  KPCLADLDKLLLALCKRKHAKQAQEFFDKVKDDFMPSVKTYSILIRGWGDLGEV----AE 260

Query: 183  LMKCSNEVVLWMW*RTIPVRIFVPTG*CRVGL*AISRDGFSWSQAECLYLIRFSFE---- 350
              K  +E++       +     +    C+ G    + + F   ++  L    FS+     
Sbjct: 261  AQKLFDEMLERGCSVDLLAYNSILDSLCKAGKMDEAFNFFMKMRSIGLIPDAFSYSIFIH 320

Query: 351  ----ASDVHSAMRVLDRTRRFNLEPNVFTYNCILKLLIKSQRVEDAYQILDEMVERGVNP 518
                A+D+HS  RVLD+ RR+ L PNVFTYNCI+K L K+++V++AYQ++DEM+  GV P
Sbjct: 321  GYCTANDIHSVFRVLDQMRRYKLVPNVFTYNCIIKKLCKTKKVDEAYQLIDEMISEGVRP 380

Query: 519  DIWSYNVIQAFHCDHCEVNKADDWSD--GERWVLAGSAYLQLVLKMLIKVGRFDRTTALW 692
            D WSYN I A HCDH EVN A        +   L       ++LKMLI+VGRFDR   +W
Sbjct: 381  DCWSYNTILASHCDHNEVNLAHRLVSRMEQNNCLPDKHTYNMLLKMLIRVGRFDRVEKVW 440

Query: 693  KGMADRGFYASVSTYAVMIHGQCKKKGRVEDACKYFEMMIDEGIPPY 833
            + M DR FY SVSTY+VM+HG C+KKG++E+ACKYFEMMIDEGIPPY
Sbjct: 441  ESMEDRNFYPSVSTYSVMVHGFCQKKGKLEEACKYFEMMIDEGIPPY 487