BLASTX nr result

ID: Sinomenium22_contig00009676 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00009676
         (921 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007201191.1| hypothetical protein PRUPE_ppa002757mg [Prun...    72   4e-10
ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinu...    69   2e-09

>ref|XP_007201191.1| hypothetical protein PRUPE_ppa002757mg [Prunus persica]
           gi|462396591|gb|EMJ02390.1| hypothetical protein
           PRUPE_ppa002757mg [Prunus persica]
          Length = 636

 Score = 71.6 bits (174), Expect = 4e-10
 Identities = 54/174 (31%), Positives = 61/174 (35%), Gaps = 4/174 (2%)
 Frame = -3

Query: 907 NPSMQQGYRPPTNWGPPGPQSTPQXXXXXXXXXXXXXXXXXXXXXXXXXXA-GWEQSN-- 737
           N  MQQ Y PP NW PPG     Q                            GW+QSN  
Sbjct: 265 NSYMQQSYAPPGNWAPPGQAPIQQQQPHYGYTQPGSYAPPASYYGNYPTQGAGWDQSNQV 324

Query: 736 PSGQPXXXXXXXXXXXXXXXXXXQA-GVNYGYGQTPSASSTNXXXXXXXXXXXXXXDASP 560
           PS QP                       +Y Y QTP  +S                + S 
Sbjct: 325 PSSQPPQESSAYNYYGQQPPMGSAPPNPSYNYNQTPPVASHGYDQGYAQQPPSYGQNISS 384

Query: 559 QVEQHDPQKLYQTPGYGQPAASSQLDGTIHSQPYGAQSSAQPPPAYQASYSQPP 398
           Q    D Q+ Y T GYG PA  S +DG+  SQ      S QP  AY   YSQPP
Sbjct: 385 QAPGSDQQQQYATSGYGPPAVPSSVDGSASSQ------STQPSAAYPVPYSQPP 432


>ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinus communis]
           gi|223538874|gb|EEF40472.1| RNA-binding protein Nova-1,
           putative [Ricinus communis]
          Length = 544

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 55/203 (27%), Positives = 70/203 (34%), Gaps = 5/203 (2%)
 Frame = -3

Query: 916 RVRNPSMQQGYRPPT-----NWGPPGPQSTPQXXXXXXXXXXXXXXXXXXXXXXXXXXAG 752
           R+ +P+    Y  PT     NW  PG   TP                             
Sbjct: 255 RIIDPTGSSSYGQPTYPATGNWAQPG--QTPMQQPQYGYAQPGNQPTPPAYYGNYTQQPA 312

Query: 751 WEQSNPSGQPXXXXXXXXXXXXXXXXXXQAGVNYGYGQTPSASSTNXXXXXXXXXXXXXX 572
           W+QSNP+                      A +N  Y QTP  +S+               
Sbjct: 313 WDQSNPTTMSQTQQMAGYGYYGQQPQMGSAPLNSSYNQTPPVASSGYGNSYSQQTSNYGQ 372

Query: 571 DASPQVEQHDPQKLYQTPGYGQPAASSQLDGTIHSQPYGAQSSAQPPPAYQASYSQPPPV 392
           + S Q    + Q+ Y T  YG  A SSQ DG I SQ   A + A PPPAY    + P   
Sbjct: 373 NISSQTPTLEQQRPYATSNYGSAAVSSQSDGAISSQSTQA-APAYPPPAYNQQVADP--- 428

Query: 391 HPAAAYGSSQGYPGALPSQPAYD 323
                Y ++ GY G  P Q  YD
Sbjct: 429 ---QTYWTAAGYAGQPPPQTGYD 448


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