BLASTX nr result
ID: Sinomenium22_contig00009521
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00009521
(826 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 167 6e-39
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 167 6e-39
ref|XP_007204275.1| hypothetical protein PRUPE_ppa001584mg [Prun... 157 3e-36
ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polyme... 151 2e-34
emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera] 149 9e-34
gb|EXB59780.1| putative RNA-dependent RNA polymerase 3 [Morus no... 144 3e-32
ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citr... 144 3e-32
ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citr... 144 3e-32
ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polyme... 140 4e-31
ref|XP_007018505.1| RNA-dependent RNA polymerase family protein,... 139 1e-30
ref|XP_007152981.1| hypothetical protein PHAVU_004G1764000g, par... 136 1e-29
ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polyme... 135 2e-29
ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Popu... 134 3e-29
ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Popu... 134 3e-29
gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Mimulus... 131 3e-28
ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [A... 130 8e-28
ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polyme... 130 8e-28
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme... 129 1e-27
ref|XP_002883963.1| RNA-dependent RNA polymerase family protein ... 127 4e-27
ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabid... 127 7e-27
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 167 bits (422), Expect = 6e-39
Identities = 92/182 (50%), Positives = 115/182 (63%), Gaps = 3/182 (1%)
Frame = -1
Query: 826 EVAVPDELKVEKFPHFMERPNSYCSKSILGLIYDEVNSFSTREQQTVEVWELPSFNKD-V 650
+V V ELK EKFPHFM R +SY S SILG IYD V SF Q T E+W LP FN D V
Sbjct: 749 KVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQSTKEIWRLPLFNIDAV 808
Query: 649 PKSCMKFWVEHYEKYTEEMTAALKLSDESKDESANQVIQKYKQILYGSAXXXXXXXXXXX 470
P++C++ W + Y++Y EM AAL+ E+KDE A +VI KYKQILYG+A
Sbjct: 809 PQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESPRNLED 868
Query: 469 XXXEALAIYKIAYKNAKTNG--VGRCSFAWNVAGRALCKQHAKEQDKDSIVCSKSVLREL 296
EALAIY + Y+ NG V C+F W VAGRALCK + + + S+VC SVLR++
Sbjct: 869 IFDEALAIYHVTYEFV-INGARVSYCNFPWRVAGRALCKLYTVKLGEKSMVCVPSVLRQV 927
Query: 295 FN 290
FN
Sbjct: 928 FN 929
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 167 bits (422), Expect = 6e-39
Identities = 92/182 (50%), Positives = 115/182 (63%), Gaps = 3/182 (1%)
Frame = -1
Query: 826 EVAVPDELKVEKFPHFMERPNSYCSKSILGLIYDEVNSFSTREQQTVEVWELPSFNKD-V 650
+V V ELK EKFPHFM R +SY S SILG IYD V SF Q T E+W LP FN D V
Sbjct: 763 KVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQSTKEIWRLPLFNIDAV 822
Query: 649 PKSCMKFWVEHYEKYTEEMTAALKLSDESKDESANQVIQKYKQILYGSAXXXXXXXXXXX 470
P++C++ W + Y++Y EM AAL+ E+KDE A +VI KYKQILYG+A
Sbjct: 823 PQACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESPRNLED 882
Query: 469 XXXEALAIYKIAYKNAKTNG--VGRCSFAWNVAGRALCKQHAKEQDKDSIVCSKSVLREL 296
EALAIY + Y+ NG V C+F W VAGRALCK + + + S+VC SVLR++
Sbjct: 883 IFDEALAIYHVTYEFV-INGARVSYCNFPWRVAGRALCKLYTVKLGEKSMVCVPSVLRQV 941
Query: 295 FN 290
FN
Sbjct: 942 FN 943
>ref|XP_007204275.1| hypothetical protein PRUPE_ppa001584mg [Prunus persica]
gi|462399806|gb|EMJ05474.1| hypothetical protein
PRUPE_ppa001584mg [Prunus persica]
Length = 798
Score = 157 bits (398), Expect = 3e-36
Identities = 85/180 (47%), Positives = 118/180 (65%), Gaps = 3/180 (1%)
Frame = -1
Query: 826 EVAVPDELKVEKFPHFMERPNSYCSKSILGLIYDEVNSFSTREQQTVEVWELPSFNKDVP 647
+V VP ELK FPH+MER NSY S SILGLIYD VN++ + EV +LP F+ +VP
Sbjct: 618 KVVVPGELKSNLFPHYMERVNSYKSTSILGLIYDTVNAYQAEDASIKEVKKLPMFDVEVP 677
Query: 646 KSCMKFWVEHYEKYTEEMTAALKLSD-ESKDESANQVIQKYKQILYGSA-XXXXXXXXXX 473
+ C+K W EHY+ Y EM++A++ D +SK+ +A++V++KYK+ILYG A
Sbjct: 678 EECLKKWREHYQHYRSEMSSAMQDDDRDSKNNAADKVLRKYKEILYGGAEDLENSTRPLH 737
Query: 472 XXXXEALAIYKIAYKNAKTNG-VGRCSFAWNVAGRALCKQHAKEQDKDSIVCSKSVLREL 296
EALAIY++ Y +A + G VG+C FAW VAG ALCK + +Q +I S SVL++L
Sbjct: 738 EIFDEALAIYRVTYDHAISQGAVGKCCFAWKVAGSALCKYYMNKQGARTIEASFSVLKDL 797
>ref|XP_006353487.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
tuberosum]
Length = 1110
Score = 151 bits (382), Expect = 2e-34
Identities = 82/191 (42%), Positives = 112/191 (58%), Gaps = 5/191 (2%)
Frame = -1
Query: 826 EVAVPDELKVEKFPHFMERPNSYCSKSILGLIYDEVNSFSTREQQTVEVWELPSFNKDVP 647
+V +P LKV+KFPHF+++ SY S S+LG IYD V F E VE+ +L +F +P
Sbjct: 919 KVYIPKRLKVDKFPHFLQKKESYHSTSVLGEIYDRVEKFKAEEPAAVEIKKLSAFEVGIP 978
Query: 646 KSCMKFWVEHYEKYTEEMTAALKLSDESKDESANQVIQKYKQILYGSAXXXXXXXXXXXX 467
+C++ W E Y Y EM AL S ESK++ A+QVI+KYKQ+LY +
Sbjct: 979 DTCLRLWEERYRNYRFEMKEALNTSSESKNDLADQVIKKYKQLLYEAPDMEESIRSTTDM 1038
Query: 466 XXEALAIYKIAYKNAKTNG-VGRCSFAWNVAGRALCK----QHAKEQDKDSIVCSKSVLR 302
+ALAIY + Y AK G V +C FAW VAG ALCK HAKE ++ + S S+L
Sbjct: 1039 YNDALAIYCVTYDYAKAIGDVRKCGFAWKVAGAALCKLHAELHAKEHNQKVMAMSPSILH 1098
Query: 301 ELFN*QISLHV 269
+L N +I+ V
Sbjct: 1099 KLLNLRINQKV 1109
>emb|CAN71520.1| hypothetical protein VITISV_042316 [Vitis vinifera]
Length = 1202
Score = 149 bits (377), Expect = 9e-34
Identities = 86/181 (47%), Positives = 109/181 (60%), Gaps = 2/181 (1%)
Frame = -1
Query: 826 EVAVPDELKVEKFPHFMERPNSYCSKSILGLIYDEVNSFSTREQQTVEVWELPSFNKDVP 647
+V V ELK EKFPHFM R +SY S SILG IYD V SF Q T + VP
Sbjct: 1032 KVNVSKELKAEKFPHFMGRESSYHSTSILGQIYDAVESFQPENQSTKDA---------VP 1082
Query: 646 KSCMKFWVEHYEKYTEEMTAALKLSDESKDESANQVIQKYKQILYGSAXXXXXXXXXXXX 467
++C++ W + Y++Y EM AAL+ E+KDE A +VI KYKQILYG+A
Sbjct: 1083 QACLRSWKDRYDQYRSEMAAALQHGGETKDEYAAEVINKYKQILYGAAEFEESPRKLEDI 1142
Query: 466 XXEALAIYKIAYKNAKTNG--VGRCSFAWNVAGRALCKQHAKEQDKDSIVCSKSVLRELF 293
EALAIY + Y+ A NG V C+F W VAGRALCK + + + S+VC SVLR++F
Sbjct: 1143 FDEALAIYHVTYEFA-INGARVSYCNFPWRVAGRALCKLYTVKLGEKSMVCVPSVLRQVF 1201
Query: 292 N 290
N
Sbjct: 1202 N 1202
>gb|EXB59780.1| putative RNA-dependent RNA polymerase 3 [Morus notabilis]
Length = 521
Score = 144 bits (364), Expect = 3e-32
Identities = 76/179 (42%), Positives = 109/179 (60%), Gaps = 2/179 (1%)
Frame = -1
Query: 826 EVAVPDELKVEKFPHFMERPNSYCSKSILGLIYDEVNSFSTREQQTVEVWELPSFNKDVP 647
+V VP ELK +FPH+ME+ NS+ S+SILG IYDEV+++ + E+++LP F +VP
Sbjct: 342 QVEVPRELKPNRFPHYMEKQNSFHSRSILGWIYDEVDAYQLEDHSNKEIFKLPHFEVEVP 401
Query: 646 KSCMKFWVEHYEKYTEEMTAALKLSDESKDESANQVIQKYKQILYGSAXXXXXXXXXXXX 467
++C+ W HY+ Y ++M AL D K E+A +V +KYK++LYG+
Sbjct: 402 EACLTKWKAHYKDYRDDMCDALLAKDVGKTEAAEEVKRKYKRLLYGAEELEESTKKMEEI 461
Query: 466 XXEALAIYKIAYKNA-KTNGVGRCSFAWNVAGRALCKQHA-KEQDKDSIVCSKSVLREL 296
EALAIY + Y A V CSFAWN+AG AL K HA K+ + + C SVL+E+
Sbjct: 462 YNEALAIYHVCYDYAISQRKVSYCSFAWNIAGSALLKLHAFKKIGERAFFCLPSVLKEV 520
>ref|XP_006451272.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843311|ref|XP_006475557.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X2 [Citrus
sinensis] gi|557554498|gb|ESR64512.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1013
Score = 144 bits (364), Expect = 3e-32
Identities = 80/180 (44%), Positives = 109/180 (60%), Gaps = 3/180 (1%)
Frame = -1
Query: 826 EVAVPDELKVEKFPHFMERPNS--YCSKSILGLIYDEVNSFSTREQQTVEVWELPSFNKD 653
+V VP++LKVEKFP +M R S + S S+LG IY+ V S+ ++ E+W+LP F+
Sbjct: 832 KVEVPEDLKVEKFPCYMRRDESVSFESTSVLGTIYNTVKSYEAVDRSVTEIWKLPCFDDG 891
Query: 652 VPKSCMKFWVEHYEKYTEEMTAALKLSDESKDESANQVIQKYKQILYGSAXXXXXXXXXX 473
VP++CM W +Y++Y EM A+ ++E+A VI+KYKQILYG+A
Sbjct: 892 VPEACMTKWKGYYDQYRWEMKEAIDKCTVEREEAAELVIEKYKQILYGAAEFEQSTRTLE 951
Query: 472 XXXXEALAIYKIAYK-NAKTNGVGRCSFAWNVAGRALCKQHAKEQDKDSIVCSKSVLREL 296
EALAIY I Y A V CSFAW VAG AL K +A+ Q S++CS SVLRE+
Sbjct: 952 EIYNEALAIYNITYDLAASRRQVSYCSFAWRVAGSALRKFYARRQGDRSMLCSASVLREI 1011
>ref|XP_006451271.1| hypothetical protein CICLE_v10007331mg [Citrus clementina]
gi|568843309|ref|XP_006475556.1| PREDICTED: probable
RNA-dependent RNA polymerase 3-like isoform X1 [Citrus
sinensis] gi|557554497|gb|ESR64511.1| hypothetical
protein CICLE_v10007331mg [Citrus clementina]
Length = 1015
Score = 144 bits (364), Expect = 3e-32
Identities = 80/180 (44%), Positives = 109/180 (60%), Gaps = 3/180 (1%)
Frame = -1
Query: 826 EVAVPDELKVEKFPHFMERPNS--YCSKSILGLIYDEVNSFSTREQQTVEVWELPSFNKD 653
+V VP++LKVEKFP +M R S + S S+LG IY+ V S+ ++ E+W+LP F+
Sbjct: 834 KVEVPEDLKVEKFPCYMRRDESVSFESTSVLGTIYNTVKSYEAVDRSVTEIWKLPCFDDG 893
Query: 652 VPKSCMKFWVEHYEKYTEEMTAALKLSDESKDESANQVIQKYKQILYGSAXXXXXXXXXX 473
VP++CM W +Y++Y EM A+ ++E+A VI+KYKQILYG+A
Sbjct: 894 VPEACMTKWKGYYDQYRWEMKEAIDKCTVEREEAAELVIEKYKQILYGAAEFEQSTRTLE 953
Query: 472 XXXXEALAIYKIAYK-NAKTNGVGRCSFAWNVAGRALCKQHAKEQDKDSIVCSKSVLREL 296
EALAIY I Y A V CSFAW VAG AL K +A+ Q S++CS SVLRE+
Sbjct: 954 EIYNEALAIYNITYDLAASRRQVSYCSFAWRVAGSALRKFYARRQGDRSMLCSASVLREI 1013
>ref|XP_004241116.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Solanum
lycopersicum]
Length = 1011
Score = 140 bits (354), Expect = 4e-31
Identities = 74/180 (41%), Positives = 106/180 (58%), Gaps = 3/180 (1%)
Frame = -1
Query: 826 EVAVPDELKVEKFPHFMERPNS--YCSKSILGLIYDEVNSFSTREQQTVEVWELPSFNKD 653
+V++P LK KFPH+ME+ NS Y S SILG IYD V+S+ + E+ +LP F +
Sbjct: 831 KVSIPHYLKANKFPHYMEKGNSCSYHSTSILGQIYDHVDSYPDEDLCITEISKLPCFEVE 890
Query: 652 VPKSCMKFWVEHYEKYTEEMTAALKLSDESKDESANQVIQKYKQILYGSAXXXXXXXXXX 473
+P+ CM W YE+Y ++MT A+ E + S N+VI+KYK +LYG+
Sbjct: 891 IPQRCMTLWRGRYEEYKKDMTRAMNFDCELRITSCNEVIKKYKMLLYGAVEFEQTVRKTE 950
Query: 472 XXXXEALAIYKIAYKNAK-TNGVGRCSFAWNVAGRALCKQHAKEQDKDSIVCSKSVLREL 296
EALAIY + Y NA+ T + +C FAW VAG ALC+ HA + + + SVL+E+
Sbjct: 951 DIFDEALAIYHVTYDNARITYSIEKCGFAWKVAGSALCRIHAMYRKEKDLPILPSVLQEI 1010
>ref|XP_007018505.1| RNA-dependent RNA polymerase family protein, putative isoform 1
[Theobroma cacao] gi|508723833|gb|EOY15730.1|
RNA-dependent RNA polymerase family protein, putative
isoform 1 [Theobroma cacao]
Length = 328
Score = 139 bits (351), Expect = 1e-30
Identities = 80/183 (43%), Positives = 108/183 (59%), Gaps = 5/183 (2%)
Frame = -1
Query: 826 EVAVPDELKVEKFPHFMERPNSYCSKSILGLIYDEVNSFSTREQQTVEVWELPSFNKDVP 647
++ VP EL+ + FPH++ER S+ S SILG IYD V S+ E EV +LP F+ P
Sbjct: 146 KIEVPRELRADAFPHYLERQKSFKSASILGKIYDFVKSYG-EELPRKEVRKLPCFDVGFP 204
Query: 646 KSCMKFWVEHYEKYTEEMTAALKLSD----ESKDESANQVIQKYKQILYGSAXXXXXXXX 479
+ C + W E Y++Y E+MT L+ D E +D +AN V KYKQ LYG A
Sbjct: 205 QDCREKWTELYKQYREDMTQTLQTLDGKSKELRDVAANAVYNKYKQELYGGAVLEQRQRP 264
Query: 478 XXXXXXEALAIYKIAYKNA-KTNGVGRCSFAWNVAGRALCKQHAKEQDKDSIVCSKSVLR 302
EALAIY I+Y A + + VG+C FAW VAG AL +A EQ + ++ C+ SVL+
Sbjct: 265 LDQIYKEALAIYNISYDYAIRIDDVGKCGFAWKVAGSALLSLYASEQGEKTLSCAPSVLK 324
Query: 301 ELF 293
ELF
Sbjct: 325 ELF 327
>ref|XP_007152981.1| hypothetical protein PHAVU_004G1764000g, partial [Phaseolus
vulgaris] gi|561026290|gb|ESW24975.1| hypothetical
protein PHAVU_004G1764000g, partial [Phaseolus vulgaris]
Length = 180
Score = 136 bits (342), Expect = 1e-29
Identities = 79/179 (44%), Positives = 112/179 (62%), Gaps = 3/179 (1%)
Frame = -1
Query: 823 VAVPDELKVEKFPHFMERPNSYCSKSILGLIYDEVNSFSTREQQT-VEVWELPSFNKDVP 647
V VPDEL+ E+FPH+ME+ + S SILGLIYD V ++ T++ + E+ LP F+ +VP
Sbjct: 1 VQVPDELRAERFPHYMEKDKLFTSTSILGLIYDWVGAWQTKDLLSGEEIRLLPCFDVEVP 60
Query: 646 KSCMKFWVEHYEKYTEEMTAALKLSDESKDESANQVIQKYKQILYG-SAXXXXXXXXXXX 470
SCM+ W YE+Y MT ALK D SK + A +VI+KYK+ LYG +A
Sbjct: 61 PSCMEKWETKYEEYRMNMTDALK--DISKSDEAAKVIRKYKEELYGATARMEDSEKNVCD 118
Query: 469 XXXEALAIYKIAYKNAK-TNGVGRCSFAWNVAGRALCKQHAKEQDKDSIVCSKSVLREL 296
EALAIY++ Y+ A+ V +C+FAW VAG AL + + ++S+ C+ SVLRE+
Sbjct: 119 IYNEALAIYRVCYEYARLRKSVSKCTFAWKVAGSALTSLYIIKHKQNSLNCAPSVLREI 177
>ref|XP_006572940.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Glycine max]
Length = 988
Score = 135 bits (339), Expect = 2e-29
Identities = 75/181 (41%), Positives = 111/181 (61%), Gaps = 3/181 (1%)
Frame = -1
Query: 826 EVAVPDELKVEKFPHFMERPNSYCSKSILGLIYDEVNSFSTREQQTVEVWELPSFNKDVP 647
+V VP++L E FPH+ME+ S+ S SILGLIYDEV + + E+W+LP F+ +VP
Sbjct: 807 KVQVPNDLIAELFPHYMEKDKSFTSTSILGLIYDEVEIWLENDM-VGEIWKLPCFDVEVP 865
Query: 646 KSCMKFWVEHYEKYTEEMTAALKLSDESKD-ESANQVIQKYKQILYG-SAXXXXXXXXXX 473
SC++ W YE+Y ++MT AL L D+SK E A +V +KYK+ YG +
Sbjct: 866 PSCLEKWKTKYEEYRKDMTDALNLKDKSKSHEEAAEVNRKYKEEFYGPTLEMEGCLKSIG 925
Query: 472 XXXXEALAIYKIAYKNAK-TNGVGRCSFAWNVAGRALCKQHAKEQDKDSIVCSKSVLREL 296
EALA+Y ++Y+ A V RC FAW +AG AL + + +Q++ ++ C SV+RE+
Sbjct: 926 DIFNEALAVYNVSYEYAMLKKEVKRCGFAWKIAGSALTRLYIIKQNEKALNCDPSVVREI 985
Query: 295 F 293
F
Sbjct: 986 F 986
>ref|XP_006380470.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334280|gb|ERP58267.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 877
Score = 134 bits (338), Expect = 3e-29
Identities = 75/178 (42%), Positives = 110/178 (61%), Gaps = 4/178 (2%)
Frame = -1
Query: 823 VAVPDELKVEKFPHFMER--PNSYCSKSILGLIYDEVNSFSTREQQTVEVWELPSFNKDV 650
+ VP+ LK E FPHFM + +Y S SILG IYD+V ++ + + +VW+LP F+ +V
Sbjct: 698 IEVPEGLKAELFPHFMGKNEKKTYRSTSILGKIYDKVKAYEDMDLSSNDVWKLPCFDDEV 757
Query: 649 PKSCMKFWVEHYEKYTEEMTAALKLSDESKDESANQVIQKYKQILYGSAXXXXXXXXXXX 470
+ + W E Y +Y +EM ALK +ES D+ AN+VI+KYK+ LY +A
Sbjct: 758 HELYLVKWKELYGQYRKEMRNALKAGEESNDK-ANEVIRKYKEFLYEAAEFNLSKRRDEE 816
Query: 469 XXXEALAIYKIAYKNAKTNG-VGRCSFAWNVAGRALCKQHA-KEQDKDSIVCSKSVLR 302
EA+A+Y+++Y +AK+ G VG CSFAW VAG ALC + K Q + ++CS S L+
Sbjct: 817 IFEEAMALYQVSYNHAKSQGVVGNCSFAWRVAGLALCTLYVLKNQGERPMICSPSALK 874
>ref|XP_006380469.1| hypothetical protein POPTR_0007s06560g [Populus trichocarpa]
gi|550334279|gb|ERP58266.1| hypothetical protein
POPTR_0007s06560g [Populus trichocarpa]
Length = 899
Score = 134 bits (338), Expect = 3e-29
Identities = 75/178 (42%), Positives = 110/178 (61%), Gaps = 4/178 (2%)
Frame = -1
Query: 823 VAVPDELKVEKFPHFMER--PNSYCSKSILGLIYDEVNSFSTREQQTVEVWELPSFNKDV 650
+ VP+ LK E FPHFM + +Y S SILG IYD+V ++ + + +VW+LP F+ +V
Sbjct: 720 IEVPEGLKAELFPHFMGKNEKKTYRSTSILGKIYDKVKAYEDMDLSSNDVWKLPCFDDEV 779
Query: 649 PKSCMKFWVEHYEKYTEEMTAALKLSDESKDESANQVIQKYKQILYGSAXXXXXXXXXXX 470
+ + W E Y +Y +EM ALK +ES D+ AN+VI+KYK+ LY +A
Sbjct: 780 HELYLVKWKELYGQYRKEMRNALKAGEESNDK-ANEVIRKYKEFLYEAAEFNLSKRRDEE 838
Query: 469 XXXEALAIYKIAYKNAKTNG-VGRCSFAWNVAGRALCKQHA-KEQDKDSIVCSKSVLR 302
EA+A+Y+++Y +AK+ G VG CSFAW VAG ALC + K Q + ++CS S L+
Sbjct: 839 IFEEAMALYQVSYNHAKSQGVVGNCSFAWRVAGLALCTLYVLKNQGERPMICSPSALK 896
>gb|EYU30717.1| hypothetical protein MIMGU_mgv1a001145mg [Mimulus guttatus]
Length = 878
Score = 131 bits (330), Expect = 3e-28
Identities = 65/157 (41%), Positives = 96/157 (61%), Gaps = 2/157 (1%)
Frame = -1
Query: 826 EVAVPDELKVEKFPHFMERPN--SYCSKSILGLIYDEVNSFSTREQQTVEVWELPSFNKD 653
+V VP+EL+ E +PH ME+ + SY S S+LG IYD V++ E+W+LP F+
Sbjct: 690 KVKVPEELRAEMYPHHMEKGSELSYHSSSVLGQIYDRVDALKNDFVPRKEIWKLPCFDVP 749
Query: 652 VPKSCMKFWVEHYEKYTEEMTAALKLSDESKDESANQVIQKYKQILYGSAXXXXXXXXXX 473
+P+ +K W YE Y EMT ALK +ES++++A++VI+KYKQ+LY +
Sbjct: 750 IPEIYVKMWKSRYESYRREMTKALKSGNESRNDAADEVIKKYKQLLYEAGDMEESAKSSE 809
Query: 472 XXXXEALAIYKIAYKNAKTNGVGRCSFAWNVAGRALC 362
EA+AIY + Y A +GV +C+FAW +A ALC
Sbjct: 810 VIYDEAIAIYHVTYDYAMEHGVEKCNFAWRIAASALC 846
>ref|XP_006853665.1| hypothetical protein AMTR_s00056p00110240 [Amborella trichopoda]
gi|548857326|gb|ERN15132.1| hypothetical protein
AMTR_s00056p00110240 [Amborella trichopoda]
Length = 988
Score = 130 bits (326), Expect = 8e-28
Identities = 78/178 (43%), Positives = 105/178 (58%), Gaps = 1/178 (0%)
Frame = -1
Query: 826 EVAVPDELKVEKFPHFMERPNSYCSKSILGLIYDEVNSFSTREQQTVEVWELPSFNKDVP 647
+V VP +LK E++PHFMER Y S SILG IYD V S + + ++ LP F ++V
Sbjct: 811 KVEVPKDLKPERYPHFMERTYQYTSTSILGQIYDLVAS-AQMDVPCEDIELLPCFLEEVE 869
Query: 646 KSCMKFWVEHYEKYTEEMTAALKLSDESKDESANQVIQKYKQILYGSAXXXXXXXXXXXX 467
S M+ W Y +Y +EM AL +D+ K +A++VIQ YK+ILYG+
Sbjct: 870 PSGMEKWKGLYAQYRDEMNKALSSTDQKKS-NADEVIQNYKKILYGAQEYEERTRPREEI 928
Query: 466 XXEALAIYKIAYKNAKTNG-VGRCSFAWNVAGRALCKQHAKEQDKDSIVCSKSVLREL 296
EA IY I+Y AK + +C FAW VAG ALC+ HA +Q K+SI C SVL+EL
Sbjct: 929 FREACEIYAISYFYAKEKSDIAKCGFAWKVAGCALCELHALKQKKNSITCLSSVLQEL 986
>ref|XP_004288887.1| PREDICTED: probable RNA-dependent RNA polymerase 3-like [Fragaria
vesca subsp. vesca]
Length = 1405
Score = 130 bits (326), Expect = 8e-28
Identities = 76/180 (42%), Positives = 110/180 (61%), Gaps = 3/180 (1%)
Frame = -1
Query: 826 EVAVPDELKVEKFPHFMERPNSYCSKSILGLIYDEVNSFSTREQQTVEVWELPSFNK-DV 650
+V VP ELKV FPH+M + SY S SILG IY+ V+ T ++ EV +LP+F++ +V
Sbjct: 1225 KVDVPKELKVSCFPHYMGKNRSYPSTSILGSIYNRVDEHQTEDRSLKEVEKLPAFDENEV 1284
Query: 649 PKSCMKFWVEHYEKYTEEMTAALKLSD-ESKDESANQVIQKYKQILYGSAXXXXXXXXXX 473
P +C+ W E + +Y +EM +AL D +SK++SA+ VI+KY++ILY +
Sbjct: 1285 PDACLDKWAELHRQYRKEMASALDDDDKQSKNQSADVVIRKYRKILYEANDFEESRRPIE 1344
Query: 472 XXXXEALAIYKIAYKNAKTNG-VGRCSFAWNVAGRALCKQHAKEQDKDSIVCSKSVLREL 296
EA AIY + Y +AK G V CSFAW VAG+ALC+ HA+ ++ SVL E+
Sbjct: 1345 EIYNEAHAIYHVCYDHAKRVGNVKVCSFAWRVAGKALCQLHARNNNERFCTIVSSVLMEI 1404
>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
sativus]
Length = 1056
Score = 129 bits (324), Expect = 1e-27
Identities = 72/179 (40%), Positives = 102/179 (56%), Gaps = 1/179 (0%)
Frame = -1
Query: 826 EVAVPDELKVEKFPHFMER-PNSYCSKSILGLIYDEVNSFSTREQQTVEVWELPSFNKDV 650
++ VP LK PHFMER NSY S SILG I+D N + E +EV +LP F +++
Sbjct: 878 KIEVPKHLKAGTLPHFMERGKNSYVSTSILGQIFDTANMYQ-EEVPNIEVQKLPCFEEEL 936
Query: 649 PKSCMKFWVEHYEKYTEEMTAALKLSDESKDESANQVIQKYKQILYGSAXXXXXXXXXXX 470
P+ W YE Y ++M A++L ++K+ +A I+KYK+ILYG+
Sbjct: 937 PEYIFMKWKFLYELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILYGAEELEGSPRSNEE 996
Query: 469 XXXEALAIYKIAYKNAKTNGVGRCSFAWNVAGRALCKQHAKEQDKDSIVCSKSVLRELF 293
EALAIY++ Y +A + V C FAW VAG AL K +A + + S C SV+RE+F
Sbjct: 997 VYQEALAIYQVTYDHAMSRSVRNCGFAWKVAGSALFKLYAIKHSERSFHCLPSVMREIF 1055
>ref|XP_002883963.1| RNA-dependent RNA polymerase family protein [Arabidopsis lyrata
subsp. lyrata] gi|297329803|gb|EFH60222.1| RNA-dependent
RNA polymerase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 981
Score = 127 bits (320), Expect = 4e-27
Identities = 77/181 (42%), Positives = 107/181 (59%), Gaps = 3/181 (1%)
Frame = -1
Query: 826 EVAVPDELKVEKFPHFMERPNSYCSKSILGLIYDEVNSFSTREQQ-TVEVWELPSFNKD- 653
+V +P+EL+ + FPH+MER + S SILGLIYD V S +T E + E+ +LP F +
Sbjct: 803 KVYLPNELRPDIFPHYMEREKKFKSTSILGLIYDFVKSQTTEEPTPSSEISKLPCFEDEP 862
Query: 652 VPKSCMKFWVEHYEKYTEEMTAALKLSDESKDESANQVIQKYKQILYGSAXXXXXXXXXX 473
V + M+ Y+ Y EMT A+K KDESAN+VIQ+YKQ YG+A
Sbjct: 863 VSEFHMEKCRRWYDNYRSEMTQAMKTD---KDESANEVIQRYKQEFYGAAGFEDSKKSLE 919
Query: 472 XXXXEALAIYKIAYKNAKTNGVGRCSFAWNVAGRALCKQH-AKEQDKDSIVCSKSVLREL 296
+AL +YKI Y A GV +C F W VAG LC+ + K+ + S+VC+ SVL+EL
Sbjct: 920 ELYPQALTLYKIVYDYAIHAGVSKCGFVWKVAGPVLCRFYLMKKMQEKSLVCAPSVLKEL 979
Query: 295 F 293
+
Sbjct: 980 W 980
>ref|NP_179581.2| probable RNA-dependent RNA polymerase 3 [Arabidopsis thaliana]
gi|322967566|sp|O82190.2|RDR3_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 3;
Short=AtRDRP3; AltName: Full=RNA-directed RNA polymerase
3 gi|330251848|gb|AEC06942.1| probable RNA-dependent RNA
polymerase 3 [Arabidopsis thaliana]
Length = 992
Score = 127 bits (318), Expect = 7e-27
Identities = 73/181 (40%), Positives = 107/181 (59%), Gaps = 4/181 (2%)
Frame = -1
Query: 826 EVAVPDELKVEKFPHFMERP--NSYCSKSILGLIYDEVNSFSTREQQTVEVWELPSFNKD 653
+V +P +L+++ FPH+MER + S SILGLI+D V+S + E E+ +L F +
Sbjct: 810 KVDLPPDLEIKNFPHYMERDPKRDFRSTSILGLIFDTVDSHNAEEPPPSEISKLWYFEDE 869
Query: 652 -VPKSCMKFWVEHYEKYTEEMTAALKLSDESK-DESANQVIQKYKQILYGSAXXXXXXXX 479
VPKS M + YE Y EM+ A+ +D+ K ++ N+VIQ+YKQ YG+A
Sbjct: 870 PVPKSHMDKFTSWYENYRSEMSQAMMETDKVKRNQLTNEVIQRYKQDFYGAAGFEDSNKS 929
Query: 478 XXXXXXEALAIYKIAYKNAKTNGVGRCSFAWNVAGRALCKQHAKEQDKDSIVCSKSVLRE 299
+ALA+Y + Y A GV +C+FAWNVAG LCK + K+ S+V S SVL++
Sbjct: 930 LEELYPQALALYNVVYDYAIQEGVAKCTFAWNVAGPVLCKFYLKKTKDKSVVASTSVLKK 989
Query: 298 L 296
L
Sbjct: 990 L 990