BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00008743
         (1182 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vi...   275   2e-71
emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera]   253   1e-64
ref|XP_002516534.1| Poly(A) polymerase beta, putative [Ricinus c...   233   2e-58
ref|XP_007012184.1| Poly(A) polymerase 1 isoform 3 [Theobroma ca...   231   6e-58
ref|XP_007012183.1| Poly(A) polymerase 1 isoform 2 [Theobroma ca...   226   1e-56
ref|XP_007012189.1| Poly(A) polymerase 1 isoform 8 [Theobroma ca...   225   3e-56
ref|XP_007012188.1| Poly(A) polymerase 1 isoform 7 [Theobroma ca...   225   3e-56
ref|XP_007012185.1| Poly(A) polymerase 1 isoform 4 [Theobroma ca...   225   3e-56
ref|XP_007012182.1| Poly(A) polymerase 1 isoform 1 [Theobroma ca...   225   3e-56
ref|XP_002515957.1| nucleic acid binding protein, putative [Rici...   220   1e-54
ref|XP_002324162.2| hypothetical protein POPTR_0018s04870g [Popu...   214   4e-53
ref|XP_007012186.1| Poly(A) polymerase 1 isoform 5 [Theobroma ca...   211   5e-52
ref|XP_002308592.2| hypothetical protein POPTR_0006s25200g [Popu...   209   2e-51
ref|XP_004155993.1| PREDICTED: poly(A) polymerase-like [Cucumis ...   204   6e-50
ref|XP_004141785.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) poly...   204   6e-50
ref|XP_004245142.1| PREDICTED: poly(A) polymerase-like [Solanum ...   203   1e-49
ref|XP_007012187.1| Poly(A) polymerase 1 isoform 6 [Theobroma ca...   202   3e-49
ref|XP_006366691.1| PREDICTED: poly(A) polymerase-like isoform X...   200   1e-48
gb|EXB60284.1| Poly(A) polymerase [Morus notabilis]                   198   4e-48
gb|EXB74588.1| Poly(A) polymerase [Morus notabilis]                   197   1e-47

>ref|XP_002277939.1| PREDICTED: poly(A) polymerase-like [Vitis vinifera]
          Length = 770

 Score =  275 bits (704), Expect = 2e-71
 Identities = 169/379 (44%), Positives = 226/379 (59%), Gaps = 7/379 (1%)
 Frame = +2

Query: 2    IERDTCGVLQCHPYPTEYVDSSKQSSHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFRHS 181
            IERDT G LQCHPYP EYVD+SKQ SHCAFFMGLQRKQG  +QEGQQFDIRGTVDEFRHS
Sbjct: 405  IERDTFGKLQCHPYPHEYVDTSKQCSHCAFFMGLQRKQGEIIQEGQQFDIRGTVDEFRHS 464

Query: 182  VNLYMFWKPGMKIYVSCVRRKQLPQFVFPDGYRQHRPSRVTCQQRQSEKTYHVSEECRVG 361
            +N+YMFWKPGM+IYVS VRRKQ+P +VFP+GY++ RP R   QQ+         E CR G
Sbjct: 465  INMYMFWKPGMEIYVSHVRRKQIPSYVFPEGYKRSRPQRPVNQQQG-------DEACRTG 517

Query: 362  SEERRLKRKKNGEVVDLTPNKPEKRASI-PHRLESIYPESSSRPRRAYQVGSSESKLDFT 538
            S E+ +KRKK+ E VD+  +K  KR +I P R +S+ PE  S     ++  SS  +   +
Sbjct: 518  SSEKHMKRKKDPEEVDVEQDKAAKRLTISPQRQDSVSPEIIS-----HRFSSSSQECSAS 572

Query: 539  GANSTENDVMSEKPEHAYLSPLKVLLVSHSSSDEVCQVGFDKKEVKNLASMDMESADEGS 718
            G+   +  V                       D  CQVG  K E  +L S ++E+ + G+
Sbjct: 573  GSAKAKEIV---------------------EGDRKCQVGMGKLE--DLVSTNVENIEMGA 609

Query: 719  SGR--QFECANDIGKLKPEQH---ILNGKNDGMESAANSYGNVNVSCGDGSNENGRLESV 883
             GR  ++  A++ G ++P++    I    N    S +NS    +++    S+ +   ESV
Sbjct: 610  IGRGMRWMKADEKGNIEPDKSDKPIPCTGNAEAGSVSNSSVVTSITSEVSSSGDVGFESV 669

Query: 884  AGCC-RITGSNELTDSQTSSLGNACEVDSGLLTENRSLNECEAFQDGVVEDLEPNVTLEV 1060
             G     TGS E ++    S G++CE DS LL EN  +N  E FQDG+ E+LEPN  L +
Sbjct: 670  GGSSDGNTGSVEGSNILGISQGDSCEADSELLLENGCVNAKEGFQDGLHEELEPNAALGI 729

Query: 1061 FIKAREVVDSESLQKPVIR 1117
             +K+R  VDSE + K V+R
Sbjct: 730  VLKSRGGVDSEPVPKSVLR 748


>emb|CAN69980.1| hypothetical protein VITISV_011285 [Vitis vinifera]
          Length = 778

 Score =  253 bits (646), Expect = 1e-64
 Identities = 157/353 (44%), Positives = 209/353 (59%), Gaps = 7/353 (1%)
 Frame = +2

Query: 2    IERDTCGVLQCHPYPTEYVDSSKQSSHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFRHS 181
            IERDT G LQCHPYP EYVD+SKQ SHCAFFMGLQRKQG  +QEGQQFDIRGTVDEFRHS
Sbjct: 396  IERDTFGKLQCHPYPHEYVDTSKQCSHCAFFMGLQRKQGEIIQEGQQFDIRGTVDEFRHS 455

Query: 182  VNLYMFWKPGMKIYVSCVRRKQLPQFVFPDGYRQHRPSRVTCQQRQSEKTYHVSEECRVG 361
            +N+YMFWKPGM+IYVS VRRKQ+P +VFP+GY++ RP R   QQ+         E CR G
Sbjct: 456  INMYMFWKPGMEIYVSHVRRKQIPSYVFPEGYKRSRPQRPVNQQQG-------DEACRTG 508

Query: 362  SEERRLKRKKNGEVVDLTPNKPEKRASI-PHRLESIYPESSSRPRRAYQVGSSESKLDFT 538
            S E+ +KRKK+ E VD+  +K  KR +I P R +S+ PE  S     ++  SS  +   +
Sbjct: 509  SSEKHMKRKKDPEEVDVEQDKAAKRLTISPQRQDSVSPEIIS-----HRFSSSSQECSAS 563

Query: 539  GANSTENDVMSEKPEHAYLSPLKVLLVSHSSSDEVCQVGFDKKEVKNLASMDMESADEGS 718
            G+   +  V                       D  CQVG  K E  +L S ++E+ + G+
Sbjct: 564  GSAKAKEIV---------------------EGDRKCQVGMGKLE--DLVSTNVENIEMGA 600

Query: 719  SGR--QFECANDIGKLKPEQH---ILNGKNDGMESAANSYGNVNVSCGDGSNENGRLESV 883
             GR  ++  A++ G ++P++    I    N    S +NS    +++    S+ +   ESV
Sbjct: 601  IGRGMRWMKADEKGNIEPDKSDKPIPCTGNAEAGSVSNSSVVTSITSEVSSSGDVGFESV 660

Query: 884  AGCC-RITGSNELTDSQTSSLGNACEVDSGLLTENRSLNECEAFQDGVVEDLE 1039
             G     TGS E ++    S G++CE DS LL EN  +N  E FQDG+ E+LE
Sbjct: 661  GGSSDGNTGSVEGSNILGISQGDSCEADSELLLENGCVNAKEGFQDGLHEELE 713


>ref|XP_002516534.1| Poly(A) polymerase beta, putative [Ricinus communis]
            gi|223544354|gb|EEF45875.1| Poly(A) polymerase beta,
            putative [Ricinus communis]
          Length = 754

 Score =  233 bits (593), Expect = 2e-58
 Identities = 151/375 (40%), Positives = 201/375 (53%), Gaps = 3/375 (0%)
 Frame = +2

Query: 2    IERDTCGVLQCHPYPTEYVDSSKQSSHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFRHS 181
            IERDT G+LQCHPYP EY+D+SKQ  HCAFFMGLQR++GV  QEGQQFDIRGTV+EFR  
Sbjct: 413  IERDTIGMLQCHPYPNEYIDTSKQCPHCAFFMGLQRRKGVSGQEGQQFDIRGTVEEFRQE 472

Query: 182  VNLYMFWKPGMKIYVSCVRRKQLPQFVFPDGYRQHRPSRVTCQQRQSEKTYHVSEECRVG 361
            +N+YMFWKPGM +YVS  RR+QLP FVFPDGY++ R SR   Q  Q+ K   VS   R G
Sbjct: 473  INMYMFWKPGMDVYVSHARRRQLPAFVFPDGYKRSRTSRHPNQ--QAGKPSDVSATSRAG 530

Query: 362  SEERRLKRKKNGEVVDLTPNKPEKRASI-PHRLESIYPESSSRPRRAYQVGSSESKLDFT 538
            S E  LKRK + EVVD+ P+KPEKRAS+ P RL+S+ PES++       + S    +   
Sbjct: 531  SVEGHLKRKNDHEVVDVRPDKPEKRASVSPQRLQSVSPESNTISSGRTSLVSFCEGVPLE 590

Query: 539  GANSTENDVMSE-KPEHAYLSPLKVLLVSHSSSDEVCQVGFDKKEVKNLASMDMESAD-E 712
             +   + D  SE K +  +    K   V+     +V +       +    SMD++     
Sbjct: 591  SSTVADVDSNSEGKLDRGHSDNGK---VTFRGVVQVTETINHDPRISAQTSMDLDDIPIY 647

Query: 713  GSSGRQFECANDIGKLKPEQHILNGKNDGMESAANSYGNVNVSCGDGSNENGRLESVAGC 892
             S   + EC   I    P+Q +L           + Y   N   G+     G        
Sbjct: 648  LSKVEEAEC--KIMNPDPKQELL-----------DPYATSNSINGEAPKTMG-------- 686

Query: 893  CRITGSNELTDSQTSSLGNACEVDSGLLTENRSLNECEAFQDGVVEDLEPNVTLEVFIKA 1072
                      + +   LG+    DS  L E   L+     Q G++E+LEPN  +   + +
Sbjct: 687  ----------EDRIGDLGDILAADSDSLLETDCLDVSRLSQSGLLENLEPNTEMVKVVNS 736

Query: 1073 REVVDSESLQKPVIR 1117
            ++   SESLQKPVIR
Sbjct: 737  QDGARSESLQKPVIR 751


>ref|XP_007012184.1| Poly(A) polymerase 1 isoform 3 [Theobroma cacao]
            gi|508782547|gb|EOY29803.1| Poly(A) polymerase 1 isoform
            3 [Theobroma cacao]
          Length = 811

 Score =  231 bits (588), Expect = 6e-58
 Identities = 165/420 (39%), Positives = 212/420 (50%), Gaps = 41/420 (9%)
 Frame = +2

Query: 2    IERDTCGVLQCHPYPTEYVDSSKQSSHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFRHS 181
            IERDT G+LQCHPYP EYVD+SKQ  HCAFFMGLQRK+GV  QEGQQFDIRGTVDEFR  
Sbjct: 406  IERDTNGMLQCHPYPNEYVDTSKQFPHCAFFMGLQRKEGVSGQEGQQFDIRGTVDEFRQE 465

Query: 182  VNLYMFWKPGMKIYVSCVRRKQLPQFVFPDGYRQHRPSRVTCQQRQSEKTYHVSEECRVG 361
            +++YM+WKPGM IYVS VRR+QLP FVFPDGY++ R SR   Q  Q+ K        + G
Sbjct: 466  ISMYMYWKPGMDIYVSHVRRRQLPAFVFPDGYKRPRSSRHPGQ--QTGKICEDITRSQSG 523

Query: 362  SEERRLKRKKNGEVVDLTPNKPEKRASI-PHRLESIYPESSSRPRRAYQVGSSESKLDFT 538
            S ER++KRK   E  D   +KP+KR+SI P RLES+ PESS+            S+   T
Sbjct: 524  SVERQIKRKHEDEAFDEKMDKPDKRSSISPQRLESVSPESSA------------SRSGGT 571

Query: 539  GANSTENDVMSEKPEHAYLSPLKVLLVSHSSSD-EVCQVGFDKKEVKNL--------ASM 691
               S    V  E+P    +    VL  S    D E   VG   ++ + +           
Sbjct: 572  SHISDGQMVTLERPTTWDVDSNSVLRQSSGLLDSEKRNVGISIQQARTVDQGSLTLSGQT 631

Query: 692  DMESADEGSSGRQFECANDIGK--LKPEQHILNGKNDGMESAANSYGNVNVSCGD----- 850
             ++     S  R  E A  +G+  L+ E H      D         G      GD     
Sbjct: 632  SLDVVHNLSVVRNVESAEQMGEPFLRQESHSPCEVPDSELRETCKTGVNQEKTGDYSSAY 691

Query: 851  ------GSNEN---------GRLESVAGCCRITGSNELTDSQTSSLGNA---------CE 958
                  GS+           G  + V   C  T   E+ +S   S  NA         C 
Sbjct: 692  MNDAETGSSRRILNWKGGGVGVDQEVVKPCNQTAVVEIAESVFGSSSNAQNLNCEGVVCS 751

Query: 959  VDSGLLTENRSLNECEAFQDGVVEDLEPNVTLEVFIKAREVVDSESLQKPVIRLSLTTTA 1138
             D   L EN  LN    FQ+ + E+L+PN+ L   + +++   SE+LQKPV+RLSL + A
Sbjct: 752  ADLDSLLENGHLNANGVFQNSLSEELKPNIALGKVVNSQDGARSETLQKPVMRLSLKSMA 811


>ref|XP_007012183.1| Poly(A) polymerase 1 isoform 2 [Theobroma cacao]
            gi|508782546|gb|EOY29802.1| Poly(A) polymerase 1 isoform
            2 [Theobroma cacao]
          Length = 812

 Score =  226 bits (576), Expect = 1e-56
 Identities = 165/421 (39%), Positives = 212/421 (50%), Gaps = 42/421 (9%)
 Frame = +2

Query: 2    IERDTCGVLQCHPYPTEYVDSSKQSSHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFRHS 181
            IERDT G+LQCHPYP EYVD+SKQ  HCAFFMGLQRK+GV  QEGQQFDIRGTVDEFR  
Sbjct: 406  IERDTNGMLQCHPYPNEYVDTSKQFPHCAFFMGLQRKEGVSGQEGQQFDIRGTVDEFRQE 465

Query: 182  VNLYMFWKPGMKIYVSCVRRKQLPQFVFPDGYRQHRPSRVTCQQRQSEKTYHVSEECRVG 361
            +++YM+WKPGM IYVS VRR+QLP FVFPDGY++ R SR   Q  Q+ K        + G
Sbjct: 466  ISMYMYWKPGMDIYVSHVRRRQLPAFVFPDGYKRPRSSRHPGQ--QTGKICEDITRSQSG 523

Query: 362  SEERRLKRKKNGEVVDLTPNKPEKRASI-PHRLESIYPESSSRPRRAYQVGSSESKLDFT 538
            S ER++KRK   E  D   +KP+KR+SI P RLES+ PESS+            S+   T
Sbjct: 524  SVERQIKRKHEDEAFDEKMDKPDKRSSISPQRLESVSPESSA------------SRSGGT 571

Query: 539  GANSTENDVMSEKPEHAYLSPLKVLLVSHSSSD-EVCQVGFDKKEVKNL--------ASM 691
               S    V  E+P    +    VL  S    D E   VG   ++ + +           
Sbjct: 572  SHISDGQMVTLERPTTWDVDSNSVLRQSSGLLDSEKRNVGISIQQARTVDQGSLTLSGQT 631

Query: 692  DMESADEGSSGRQFECANDIGK--LKPEQHILNGKNDGMESAANSYGNVNVSCGD----- 850
             ++     S  R  E A  +G+  L+ E H      D         G      GD     
Sbjct: 632  SLDVVHNLSVVRNVESAEQMGEPFLRQESHSPCEVPDSELRETCKTGVNQEKTGDYSSAY 691

Query: 851  ------GSNEN---------GRLESVAGCCRITGSNELTDSQTSSLGNA---------CE 958
                  GS+           G  + V   C  T   E+ +S   S  NA         C 
Sbjct: 692  MNDAETGSSRRILNWKGGGVGVDQEVVKPCNQTAVVEIAESVFGSSSNAQNLNCEGVVCS 751

Query: 959  VDSGLLTENRSLNECEAFQDGVVEDLEPNVTLEVFIKAREVVDSESLQKPVI-RLSLTTT 1135
             D   L EN  LN    FQ+ + E+L+PN+ L   + +++   SE+LQKPV+ RLSL + 
Sbjct: 752  ADLDSLLENGHLNANGVFQNSLSEELKPNIALGKVVNSQDGARSETLQKPVMSRLSLKSM 811

Query: 1136 A 1138
            A
Sbjct: 812  A 812


>ref|XP_007012189.1| Poly(A) polymerase 1 isoform 8 [Theobroma cacao]
            gi|508782552|gb|EOY29808.1| Poly(A) polymerase 1 isoform
            8 [Theobroma cacao]
          Length = 603

 Score =  225 bits (573), Expect = 3e-56
 Identities = 161/413 (38%), Positives = 207/413 (50%), Gaps = 41/413 (9%)
 Frame = +2

Query: 2    IERDTCGVLQCHPYPTEYVDSSKQSSHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFRHS 181
            IERDT G+LQCHPYP EYVD+SKQ  HCAFFMGLQRK+GV  QEGQQFDIRGTVDEFR  
Sbjct: 184  IERDTNGMLQCHPYPNEYVDTSKQFPHCAFFMGLQRKEGVSGQEGQQFDIRGTVDEFRQE 243

Query: 182  VNLYMFWKPGMKIYVSCVRRKQLPQFVFPDGYRQHRPSRVTCQQRQSEKTYHVSEECRVG 361
            +++YM+WKPGM IYVS VRR+QLP FVFPDGY++ R SR   Q  Q+ K        + G
Sbjct: 244  ISMYMYWKPGMDIYVSHVRRRQLPAFVFPDGYKRPRSSRHPGQ--QTGKICEDITRSQSG 301

Query: 362  SEERRLKRKKNGEVVDLTPNKPEKRASI-PHRLESIYPESSSRPRRAYQVGSSESKLDFT 538
            S ER++KRK   E  D   +KP+KR+SI P RLES+ PESS+            S+   T
Sbjct: 302  SVERQIKRKHEDEAFDEKMDKPDKRSSISPQRLESVSPESSA------------SRSGGT 349

Query: 539  GANSTENDVMSEKPEHAYLSPLKVLLVSHSSSD-EVCQVGFDKKEVKNL--------ASM 691
               S    V  E+P    +    VL  S    D E   VG   ++ + +           
Sbjct: 350  SHISDGQMVTLERPTTWDVDSNSVLRQSSGLLDSEKRNVGISIQQARTVDQGSLTLSGQT 409

Query: 692  DMESADEGSSGRQFECANDIGK--LKPEQHILNGKNDGMESAANSYGNVNVSCGD----- 850
             ++     S  R  E A  +G+  L+ E H      D         G      GD     
Sbjct: 410  SLDVVHNLSVVRNVESAEQMGEPFLRQESHSPCEVPDSELRETCKTGVNQEKTGDYSSAY 469

Query: 851  ------GSNEN---------GRLESVAGCCRITGSNELTDSQTSSLGNA---------CE 958
                  GS+           G  + V   C  T   E+ +S   S  NA         C 
Sbjct: 470  MNDAETGSSRRILNWKGGGVGVDQEVVKPCNQTAVVEIAESVFGSSSNAQNLNCEGVVCS 529

Query: 959  VDSGLLTENRSLNECEAFQDGVVEDLEPNVTLEVFIKAREVVDSESLQKPVIR 1117
             D   L EN  LN    FQ+ + E+L+PN+ L   + +++   SE+LQKPV+R
Sbjct: 530  ADLDSLLENGHLNANGVFQNSLSEELKPNIALGKVVNSQDGARSETLQKPVMR 582


>ref|XP_007012188.1| Poly(A) polymerase 1 isoform 7 [Theobroma cacao]
            gi|508782551|gb|EOY29807.1| Poly(A) polymerase 1 isoform
            7 [Theobroma cacao]
          Length = 595

 Score =  225 bits (573), Expect = 3e-56
 Identities = 161/413 (38%), Positives = 207/413 (50%), Gaps = 41/413 (9%)
 Frame = +2

Query: 2    IERDTCGVLQCHPYPTEYVDSSKQSSHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFRHS 181
            IERDT G+LQCHPYP EYVD+SKQ  HCAFFMGLQRK+GV  QEGQQFDIRGTVDEFR  
Sbjct: 184  IERDTNGMLQCHPYPNEYVDTSKQFPHCAFFMGLQRKEGVSGQEGQQFDIRGTVDEFRQE 243

Query: 182  VNLYMFWKPGMKIYVSCVRRKQLPQFVFPDGYRQHRPSRVTCQQRQSEKTYHVSEECRVG 361
            +++YM+WKPGM IYVS VRR+QLP FVFPDGY++ R SR   Q  Q+ K        + G
Sbjct: 244  ISMYMYWKPGMDIYVSHVRRRQLPAFVFPDGYKRPRSSRHPGQ--QTGKICEDITRSQSG 301

Query: 362  SEERRLKRKKNGEVVDLTPNKPEKRASI-PHRLESIYPESSSRPRRAYQVGSSESKLDFT 538
            S ER++KRK   E  D   +KP+KR+SI P RLES+ PESS+            S+   T
Sbjct: 302  SVERQIKRKHEDEAFDEKMDKPDKRSSISPQRLESVSPESSA------------SRSGGT 349

Query: 539  GANSTENDVMSEKPEHAYLSPLKVLLVSHSSSD-EVCQVGFDKKEVKNL--------ASM 691
               S    V  E+P    +    VL  S    D E   VG   ++ + +           
Sbjct: 350  SHISDGQMVTLERPTTWDVDSNSVLRQSSGLLDSEKRNVGISIQQARTVDQGSLTLSGQT 409

Query: 692  DMESADEGSSGRQFECANDIGK--LKPEQHILNGKNDGMESAANSYGNVNVSCGD----- 850
             ++     S  R  E A  +G+  L+ E H      D         G      GD     
Sbjct: 410  SLDVVHNLSVVRNVESAEQMGEPFLRQESHSPCEVPDSELRETCKTGVNQEKTGDYSSAY 469

Query: 851  ------GSNEN---------GRLESVAGCCRITGSNELTDSQTSSLGNA---------CE 958
                  GS+           G  + V   C  T   E+ +S   S  NA         C 
Sbjct: 470  MNDAETGSSRRILNWKGGGVGVDQEVVKPCNQTAVVEIAESVFGSSSNAQNLNCEGVVCS 529

Query: 959  VDSGLLTENRSLNECEAFQDGVVEDLEPNVTLEVFIKAREVVDSESLQKPVIR 1117
             D   L EN  LN    FQ+ + E+L+PN+ L   + +++   SE+LQKPV+R
Sbjct: 530  ADLDSLLENGHLNANGVFQNSLSEELKPNIALGKVVNSQDGARSETLQKPVMR 582


>ref|XP_007012185.1| Poly(A) polymerase 1 isoform 4 [Theobroma cacao]
            gi|508782548|gb|EOY29804.1| Poly(A) polymerase 1 isoform
            4 [Theobroma cacao]
          Length = 804

 Score =  225 bits (573), Expect = 3e-56
 Identities = 161/413 (38%), Positives = 207/413 (50%), Gaps = 41/413 (9%)
 Frame = +2

Query: 2    IERDTCGVLQCHPYPTEYVDSSKQSSHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFRHS 181
            IERDT G+LQCHPYP EYVD+SKQ  HCAFFMGLQRK+GV  QEGQQFDIRGTVDEFR  
Sbjct: 406  IERDTNGMLQCHPYPNEYVDTSKQFPHCAFFMGLQRKEGVSGQEGQQFDIRGTVDEFRQE 465

Query: 182  VNLYMFWKPGMKIYVSCVRRKQLPQFVFPDGYRQHRPSRVTCQQRQSEKTYHVSEECRVG 361
            +++YM+WKPGM IYVS VRR+QLP FVFPDGY++ R SR   Q  Q+ K        + G
Sbjct: 466  ISMYMYWKPGMDIYVSHVRRRQLPAFVFPDGYKRPRSSRHPGQ--QTGKICEDITRSQSG 523

Query: 362  SEERRLKRKKNGEVVDLTPNKPEKRASI-PHRLESIYPESSSRPRRAYQVGSSESKLDFT 538
            S ER++KRK   E  D   +KP+KR+SI P RLES+ PESS+            S+   T
Sbjct: 524  SVERQIKRKHEDEAFDEKMDKPDKRSSISPQRLESVSPESSA------------SRSGGT 571

Query: 539  GANSTENDVMSEKPEHAYLSPLKVLLVSHSSSD-EVCQVGFDKKEVKNL--------ASM 691
               S    V  E+P    +    VL  S    D E   VG   ++ + +           
Sbjct: 572  SHISDGQMVTLERPTTWDVDSNSVLRQSSGLLDSEKRNVGISIQQARTVDQGSLTLSGQT 631

Query: 692  DMESADEGSSGRQFECANDIGK--LKPEQHILNGKNDGMESAANSYGNVNVSCGD----- 850
             ++     S  R  E A  +G+  L+ E H      D         G      GD     
Sbjct: 632  SLDVVHNLSVVRNVESAEQMGEPFLRQESHSPCEVPDSELRETCKTGVNQEKTGDYSSAY 691

Query: 851  ------GSNEN---------GRLESVAGCCRITGSNELTDSQTSSLGNA---------CE 958
                  GS+           G  + V   C  T   E+ +S   S  NA         C 
Sbjct: 692  MNDAETGSSRRILNWKGGGVGVDQEVVKPCNQTAVVEIAESVFGSSSNAQNLNCEGVVCS 751

Query: 959  VDSGLLTENRSLNECEAFQDGVVEDLEPNVTLEVFIKAREVVDSESLQKPVIR 1117
             D   L EN  LN    FQ+ + E+L+PN+ L   + +++   SE+LQKPV+R
Sbjct: 752  ADLDSLLENGHLNANGVFQNSLSEELKPNIALGKVVNSQDGARSETLQKPVMR 804


>ref|XP_007012182.1| Poly(A) polymerase 1 isoform 1 [Theobroma cacao]
            gi|508782545|gb|EOY29801.1| Poly(A) polymerase 1 isoform
            1 [Theobroma cacao]
          Length = 817

 Score =  225 bits (573), Expect = 3e-56
 Identities = 161/413 (38%), Positives = 207/413 (50%), Gaps = 41/413 (9%)
 Frame = +2

Query: 2    IERDTCGVLQCHPYPTEYVDSSKQSSHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFRHS 181
            IERDT G+LQCHPYP EYVD+SKQ  HCAFFMGLQRK+GV  QEGQQFDIRGTVDEFR  
Sbjct: 406  IERDTNGMLQCHPYPNEYVDTSKQFPHCAFFMGLQRKEGVSGQEGQQFDIRGTVDEFRQE 465

Query: 182  VNLYMFWKPGMKIYVSCVRRKQLPQFVFPDGYRQHRPSRVTCQQRQSEKTYHVSEECRVG 361
            +++YM+WKPGM IYVS VRR+QLP FVFPDGY++ R SR   Q  Q+ K        + G
Sbjct: 466  ISMYMYWKPGMDIYVSHVRRRQLPAFVFPDGYKRPRSSRHPGQ--QTGKICEDITRSQSG 523

Query: 362  SEERRLKRKKNGEVVDLTPNKPEKRASI-PHRLESIYPESSSRPRRAYQVGSSESKLDFT 538
            S ER++KRK   E  D   +KP+KR+SI P RLES+ PESS+            S+   T
Sbjct: 524  SVERQIKRKHEDEAFDEKMDKPDKRSSISPQRLESVSPESSA------------SRSGGT 571

Query: 539  GANSTENDVMSEKPEHAYLSPLKVLLVSHSSSD-EVCQVGFDKKEVKNL--------ASM 691
               S    V  E+P    +    VL  S    D E   VG   ++ + +           
Sbjct: 572  SHISDGQMVTLERPTTWDVDSNSVLRQSSGLLDSEKRNVGISIQQARTVDQGSLTLSGQT 631

Query: 692  DMESADEGSSGRQFECANDIGK--LKPEQHILNGKNDGMESAANSYGNVNVSCGD----- 850
             ++     S  R  E A  +G+  L+ E H      D         G      GD     
Sbjct: 632  SLDVVHNLSVVRNVESAEQMGEPFLRQESHSPCEVPDSELRETCKTGVNQEKTGDYSSAY 691

Query: 851  ------GSNEN---------GRLESVAGCCRITGSNELTDSQTSSLGNA---------CE 958
                  GS+           G  + V   C  T   E+ +S   S  NA         C 
Sbjct: 692  MNDAETGSSRRILNWKGGGVGVDQEVVKPCNQTAVVEIAESVFGSSSNAQNLNCEGVVCS 751

Query: 959  VDSGLLTENRSLNECEAFQDGVVEDLEPNVTLEVFIKAREVVDSESLQKPVIR 1117
             D   L EN  LN    FQ+ + E+L+PN+ L   + +++   SE+LQKPV+R
Sbjct: 752  ADLDSLLENGHLNANGVFQNSLSEELKPNIALGKVVNSQDGARSETLQKPVMR 804


>ref|XP_002515957.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223544862|gb|EEF46377.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 712

 Score =  220 bits (560), Expect = 1e-54
 Identities = 151/373 (40%), Positives = 195/373 (52%), Gaps = 1/373 (0%)
 Frame = +2

Query: 2    IERDTCGVLQCHPYPTEYVDSSKQSSHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFRHS 181
            I+RDT G LQCHPYP EYVD+SK  +HCAFFMGLQRKQG  +QEGQQFDIRGTVDEFR+S
Sbjct: 367  IDRDTYGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKQGEMIQEGQQFDIRGTVDEFRNS 426

Query: 182  VNLYMFWKPGMKIYVSCVRRKQLPQFVFPDGYRQHRPSRVTCQQRQSEKTYHVSEECRVG 361
            +N+YMFWKPGM+IYVS VRRKQ+P +VFPDGYR+ R  RVT QQ+  +     S+    G
Sbjct: 427  INMYMFWKPGMEIYVSHVRRKQIPSYVFPDGYRRARHPRVTAQQQSDKTCCGDSDAYGNG 486

Query: 362  SEERRLKRKKNGEVVDLTPNKPEKRASI-PHRLESIYPESSSRPRRAYQVGSSESKLDFT 538
            S ER  KRKK+ + +D+  + PEKR SI P R +S+ P+  +     +   SSE      
Sbjct: 487  SSERGHKRKKDSDEIDVKNDMPEKRNSISPQRRDSVSPDIFT---HKFGGPSSECSAIAE 543

Query: 539  GANSTENDVMSEKPEHAYLSPLKVLLVSHSSSDEVCQVGFDKKEVKNLASMDMESADEGS 718
            G  + + D  +  P+                 D VC                        
Sbjct: 544  GKGTLQLDKRTFCPDDV---------------DGVC------------------------ 564

Query: 719  SGRQFECANDIGKLKPEQHILNGKNDGMESAANSYGNVNVSCGDGSNENGRLESVAGCCR 898
                   +N  G       I++ ++ G ES A          G     NG  E       
Sbjct: 565  ------TSNSSGITSLSSEIVSCEDIGTESVA----------GSSEGNNGSAE------- 601

Query: 899  ITGSNELTDSQTSSLGNACEVDSGLLTENRSLNECEAFQDGVVEDLEPNVTLEVFIKARE 1078
              GSN L  SQ+ S G+A   +S  L EN +  +    QDG+ E+LEPN  +E+      
Sbjct: 602  --GSNNLVSSQSDS-GDA---ESESLLEN-AYADGGVLQDGLQEELEPNAAVEMAPDTLG 654

Query: 1079 VVDSESLQKPVIR 1117
             V +E+LQKPVIR
Sbjct: 655  -VSAEALQKPVIR 666


>ref|XP_002324162.2| hypothetical protein POPTR_0018s04870g [Populus trichocarpa]
            gi|550318063|gb|EEF02727.2| hypothetical protein
            POPTR_0018s04870g [Populus trichocarpa]
          Length = 835

 Score =  214 bits (546), Expect = 4e-53
 Identities = 166/443 (37%), Positives = 219/443 (49%), Gaps = 64/443 (14%)
 Frame = +2

Query: 2    IERDTCGVLQCHPYPTEYVDSSKQSSHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFRHS 181
            IERDT G+LQCHPYP EY+D+SKQ  HCAFFMGLQRK+GV  QEGQQFDIRGTVDEFR  
Sbjct: 401  IERDTNGMLQCHPYPNEYIDASKQCPHCAFFMGLQRKEGVTGQEGQQFDIRGTVDEFRQE 460

Query: 182  VNLYMFWKPGMKIYVSCVRRKQLPQFVFPDGYRQHRPSRVTCQ--QRQSEKTYHVSEEC- 352
            +N+YMFWKPGM+IYVS VRR+QLP FVFPDGY++ R SR   Q   +      +VS  C 
Sbjct: 461  INMYMFWKPGMEIYVSHVRRRQLPGFVFPDGYKRSRSSRHINQHTSKTGGMEIYVSHACY 520

Query: 353  --------RVGSEERR-----LKRKKNGEVVDLTPNKPEKRASI-PHRLESIYPESSSRP 490
                       S   R     +KRK + E+ DL   KPEK+A   P R +S+ P SS   
Sbjct: 521  SPVRPQSVSPSSSVSRSGVAPVKRKNDCEMEDL---KPEKQACYSPVRPQSVSPSSSVSR 577

Query: 491  RRAYQVGSSE-------SKLDFTGANSTENDVMSEKPEHAYLSPLKVLLVSHSSSDEVCQ 649
                 + SS        S +   G+N    DV S     +    L+        S ++ +
Sbjct: 578  SGVTSLASSWEGVKLGCSTIRDIGSNC--KDVASNSEVRSSSGQLESEKDGLGDSMQLGE 635

Query: 650  VGFDKKEVKNLASMDMESADEGSSGRQFECANDIGKLKPEQHILN----------GKNDG 799
              +    +    SMD+   D      + E AN +  ++P + ++N           +   
Sbjct: 636  TVYQDSPLNRQISMDVH--DSPIVRNELEPANHMNGIEPMESMVNTITKQEMLSPQEIPN 693

Query: 800  MESAANSYGNVNVS-CGDGSN--ENGR----LESVAG--------------CCRITGSNE 916
             E+       VN    G GSN  ENG     L  VAG              CC+ T   E
Sbjct: 694  FETGEKHETGVNDKIAGLGSNLMENGSSRKLLNWVAGTSQAMEVDQELVKPCCQ-TAVVE 752

Query: 917  LTDSQTSS---------LGNACEVDSGLLTENRSLNECEAFQDGVVEDLEPNVTLEVFIK 1069
              +S   S          GN C VD+ ++ E+  LN       G+ E+LEP   +   + 
Sbjct: 753  YAESVIRSHSGTQNLNCEGNVCAVDADVVLESGCLNMSRVLPKGLPEELEPKTAIGKVVN 812

Query: 1070 AREVVDSESLQKPVIRLSLTTTA 1138
            +++   SESLQKP+IRLSL +TA
Sbjct: 813  SQDGARSESLQKPMIRLSLKSTA 835


>ref|XP_007012186.1| Poly(A) polymerase 1 isoform 5 [Theobroma cacao]
            gi|508782549|gb|EOY29805.1| Poly(A) polymerase 1 isoform
            5 [Theobroma cacao]
          Length = 801

 Score =  211 bits (537), Expect = 5e-52
 Identities = 153/400 (38%), Positives = 197/400 (49%), Gaps = 41/400 (10%)
 Frame = +2

Query: 2    IERDTCGVLQCHPYPTEYVDSSKQSSHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFRHS 181
            IERDT G+LQCHPYP EYVD+SKQ  HCAFFMGLQRK+GV  QEGQQFDIRGTVDEFR  
Sbjct: 406  IERDTNGMLQCHPYPNEYVDTSKQFPHCAFFMGLQRKEGVSGQEGQQFDIRGTVDEFRQE 465

Query: 182  VNLYMFWKPGMKIYVSCVRRKQLPQFVFPDGYRQHRPSRVTCQQRQSEKTYHVSEECRVG 361
            +++YM+WKPGM IYVS VRR+QLP FVFPDGY++ R SR   Q  Q+ K        + G
Sbjct: 466  ISMYMYWKPGMDIYVSHVRRRQLPAFVFPDGYKRPRSSRHPGQ--QTGKICEDITRSQSG 523

Query: 362  SEERRLKRKKNGEVVDLTPNKPEKRASI-PHRLESIYPESSSRPRRAYQVGSSESKLDFT 538
            S ER++KRK   E  D   +KP+KR+SI P RLES+ PESS+            S+   T
Sbjct: 524  SVERQIKRKHEDEAFDEKMDKPDKRSSISPQRLESVSPESSA------------SRSGGT 571

Query: 539  GANSTENDVMSEKPEHAYLSPLKVLLVSHSSSD-EVCQVGFDKKEVKNL--------ASM 691
               S    V  E+P    +    VL  S    D E   VG   ++ + +           
Sbjct: 572  SHISDGQMVTLERPTTWDVDSNSVLRQSSGLLDSEKRNVGISIQQARTVDQGSLTLSGQT 631

Query: 692  DMESADEGSSGRQFECANDIGK--LKPEQHILNGKNDGMESAANSYGNVNVSCGD----- 850
             ++     S  R  E A  +G+  L+ E H      D         G      GD     
Sbjct: 632  SLDVVHNLSVVRNVESAEQMGEPFLRQESHSPCEVPDSELRETCKTGVNQEKTGDYSSAY 691

Query: 851  ------GSNEN---------GRLESVAGCCRITGSNELTDSQTSSLGNA---------CE 958
                  GS+           G  + V   C  T   E+ +S   S  NA         C 
Sbjct: 692  MNDAETGSSRRILNWKGGGVGVDQEVVKPCNQTAVVEIAESVFGSSSNAQNLNCEGVVCS 751

Query: 959  VDSGLLTENRSLNECEAFQDGVVEDLEPNVTLEVFIKARE 1078
             D   L EN  LN    FQ+ + E+L+PN+ L   + +++
Sbjct: 752  ADLDSLLENGHLNANGVFQNSLSEELKPNIALGKVVNSQD 791


>ref|XP_002308592.2| hypothetical protein POPTR_0006s25200g [Populus trichocarpa]
            gi|550337050|gb|EEE92115.2| hypothetical protein
            POPTR_0006s25200g [Populus trichocarpa]
          Length = 652

 Score =  209 bits (532), Expect = 2e-51
 Identities = 150/381 (39%), Positives = 193/381 (50%), Gaps = 49/381 (12%)
 Frame = +2

Query: 2    IERDTCGVLQCHPYPTEYVDSSKQSSHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFRHS 181
            IERDT G+LQCHPYP EY+D SKQ +HCAFFMGLQRK+GV  QEGQQFDIRGTVDEFR  
Sbjct: 265  IERDTDGMLQCHPYPNEYIDPSKQCAHCAFFMGLQRKEGVTGQEGQQFDIRGTVDEFRQD 324

Query: 182  VNLYMFWKPGMKIYVSCVRRKQLPQFVFPDGYRQHRPSRVTCQQRQSEKTYHVSEECRVG 361
            +N+Y+ WKPGM IYVS VRR+QLP FVFPDGY++ RPSR   QQ  + +T       + G
Sbjct: 325  INMYLPWKPGMDIYVSHVRRRQLPGFVFPDGYKRSRPSRHVNQQ--TNRTSEDVARSQSG 382

Query: 362  SEERRLKRKKNGEVVDLTPNKPEKRASI-PHRLESIYPESSSRPRRAYQVGSS------- 517
            S ER +KRK + E+ DL P KPEKRAS  P RL+S+ P SS+       + SS       
Sbjct: 383  SAERHVKRKNDCEMADLKPVKPEKRASTSPQRLQSVSPSSSAGRSGMTSLASSCEGVILG 442

Query: 518  -----------ESKLDFTGANSTENDVMSEKPEHAYLSPLKVLLVSHSSSDEVCQVGF-D 661
                       E     +   ST   + SEK +      L V +   S S+    +   D
Sbjct: 443  CSTIGDIVSNCEDVASNSEVRSTSWQLESEKSDLGDARQLGVTVYQESPSNRQTSMDVHD 502

Query: 662  KKEVKNLASMDMESADEGSSGRQFECANDIGKLKPEQHILNGKNDGMESAANSYGNVNVS 841
               V+N    ++E AD  +         D  ++  ++ + + +    E+       VN +
Sbjct: 503  SPIVRN----ELEPADHMNGSEPMGLMFD--RITKQELVSSHEVPNFETGEKHEVGVNEN 556

Query: 842  CGD-GSN--ENGR----LESVAGC-------------CRITGSNELTDSQTSSL------ 943
              D GSN  ENG     +  V G              C  T   E  +S  SS       
Sbjct: 557  IEDLGSNFLENGSSRKLMNWVGGASRGMEVDQELVKPCSQTAVVEFAESVISSHSGSQNL 616

Query: 944  ---GNACEVDSGLLTENRSLN 997
               GN C VD+  L E+  LN
Sbjct: 617  NYEGNVCAVDADSLLESGCLN 637


>ref|XP_004155993.1| PREDICTED: poly(A) polymerase-like [Cucumis sativus]
          Length = 758

 Score =  204 bits (519), Expect = 6e-50
 Identities = 140/376 (37%), Positives = 197/376 (52%), Gaps = 4/376 (1%)
 Frame = +2

Query: 2    IERDTCGVLQCHPYPTEYVDSSKQSSHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFRHS 181
            IER T G LQCHPYP EYVD+SK  +HCAFFMGLQRKQG  +QEGQQFDIR +VDEF+H 
Sbjct: 412  IERKTEGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKQGEIIQEGQQFDIRSSVDEFKHY 471

Query: 182  VNLYMFWKPGMKIYVSCVRRKQLPQFVFPDGYRQHRPSRVTCQQRQSEKTYHVSEECRVG 361
             + YMFWKPGM+I+VS VRR+Q+P FVFP+G+++ R SR++  QR   +     +  R G
Sbjct: 472  TSSYMFWKPGMEIFVSHVRRRQIPPFVFPEGHKRFRASRLSALQRSPNQ--EDVQNGRSG 529

Query: 362  SEERRLKRKKNGEVVDLTPNKPEKRASIPHRLESIYPESSSRPRRAYQVGSSESKLDFTG 541
            S ER LKRK +   ++   N P+KR SI              PRR   V S+ S    T 
Sbjct: 530  SCERDLKRKNDPARIEGEHNSPQKRQSI-------------SPRRQDSVSSNISNFSNTA 576

Query: 542  ANSTENDVMSEKPEHAYLSPLKVLLVSHSSSDEVCQVGFDKKEVKNLASMDMESADEGSS 721
            ++      +  K      SP + +      + E  ++ F    + N +S    S+ E   
Sbjct: 577  SSERPEADIEAKTIVEKNSPCRTI------TRENEELAFGGSRIGNCSSRKDSSSVESDK 630

Query: 722  GRQFECAN-DIGKLKPEQHILNGKND---GMESAANSYGNVNVSCGDGSNENGRLESVAG 889
            G   E  + D        H     +     + S ++S  NV  +   GS+E       AG
Sbjct: 631  GSTVEIIDPDKVPFTEIDHRCASNSSVITSLTSESSSCENVGFALAAGSSEGN-----AG 685

Query: 890  CCRITGSNELTDSQTSSLGNACEVDSGLLTENRSLNECEAFQDGVVEDLEPNVTLEVFIK 1069
               I GS + +++  +S+ ++CE DS L  +NR +N      D +  + EPN  LE+ + 
Sbjct: 686  --SIEGSADESNNPGTSVVDSCEADSELQLDNRCVN-----GDSMHMETEPNAVLEMALN 738

Query: 1070 AREVVDSESLQKPVIR 1117
                V S ++Q PVIR
Sbjct: 739  PGGGVKSTTIQNPVIR 754


>ref|XP_004141785.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) polymerase-like [Cucumis
            sativus]
          Length = 772

 Score =  204 bits (519), Expect = 6e-50
 Identities = 140/376 (37%), Positives = 197/376 (52%), Gaps = 4/376 (1%)
 Frame = +2

Query: 2    IERDTCGVLQCHPYPTEYVDSSKQSSHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFRHS 181
            IER T G LQCHPYP EYVD+SK  +HCAFFMGLQRKQG  +QEGQQFDIR +VDEF+H 
Sbjct: 426  IERKTEGKLQCHPYPHEYVDTSKPCAHCAFFMGLQRKQGEIIQEGQQFDIRSSVDEFKHY 485

Query: 182  VNLYMFWKPGMKIYVSCVRRKQLPQFVFPDGYRQHRPSRVTCQQRQSEKTYHVSEECRVG 361
             + YMFWKPGM+I+VS VRR+Q+P FVFP+G+++ R SR++  QR   +     +  R G
Sbjct: 486  TSSYMFWKPGMEIFVSHVRRRQIPPFVFPEGHKRFRASRLSALQRSPNQ--EDVQNGRSG 543

Query: 362  SEERRLKRKKNGEVVDLTPNKPEKRASIPHRLESIYPESSSRPRRAYQVGSSESKLDFTG 541
            S ER LKRK +   ++   N P+KR SI              PRR   V S+ S    T 
Sbjct: 544  SCERDLKRKNDPARIEGEHNSPQKRQSI-------------SPRRQDSVSSNISNFSNTA 590

Query: 542  ANSTENDVMSEKPEHAYLSPLKVLLVSHSSSDEVCQVGFDKKEVKNLASMDMESADEGSS 721
            ++      +  K      SP + +      + E  ++ F    + N +S    S+ E   
Sbjct: 591  SSERPEADIEAKTIVEKNSPCRTI------TRENEELAFGGSRIGNCSSRKDSSSVESDK 644

Query: 722  GRQFECAN-DIGKLKPEQHILNGKND---GMESAANSYGNVNVSCGDGSNENGRLESVAG 889
            G   E  + D        H     +     + S ++S  NV  +   GS+E       AG
Sbjct: 645  GSTVEIIDPDKVPFTEIDHRCASNSSVITSLTSESSSCENVGFALAAGSSEGN-----AG 699

Query: 890  CCRITGSNELTDSQTSSLGNACEVDSGLLTENRSLNECEAFQDGVVEDLEPNVTLEVFIK 1069
               I GS + +++  +S+ ++CE DS L  +NR +N      D +  + EPN  LE+ + 
Sbjct: 700  --SIEGSADESNNPGTSVVDSCEADSELQLDNRCVN-----GDSMHMETEPNAVLEMALN 752

Query: 1070 AREVVDSESLQKPVIR 1117
                V S ++Q PVIR
Sbjct: 753  PGGGVKSTTIQNPVIR 768


>ref|XP_004245142.1| PREDICTED: poly(A) polymerase-like [Solanum lycopersicum]
          Length = 788

 Score =  203 bits (516), Expect = 1e-49
 Identities = 148/406 (36%), Positives = 208/406 (51%), Gaps = 27/406 (6%)
 Frame = +2

Query: 2    IERDTCGVLQCHPYPTEYVDSSKQSSHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFRHS 181
            IERDT G+LQCHPYP E+VD SK   HCAFF GLQRKQGVKVQEGQQFDIRGTVDEF+  
Sbjct: 412  IERDTNGMLQCHPYPNEFVDLSKPCPHCAFFTGLQRKQGVKVQEGQQFDIRGTVDEFKQD 471

Query: 182  VNLYMFWKPGMKIYVSCVRRKQLPQFVFPDGYRQHRPSRVTCQQRQSEKTYHVSEECRVG 361
            V++Y +W+PGM IYVS VRRKQ+P FVFPDGY++ R  R T      +    V+++C + 
Sbjct: 472  VSMYAYWRPGMDIYVSHVRRKQIPPFVFPDGYKRPRQPRNTSHSTPEK----VAKDC-MS 526

Query: 362  SEERRLKRKKNGEVVDLTPNKPEKRASI-PHRLESIYPESSSRPRRAYQVGSSESKLDFT 538
             EER+ KRK+  E V +   KP KRASI P R+ S+ P  SS        GSS+  +   
Sbjct: 527  PEERQPKRKQETETVHVNLGKPGKRASISPQRIGSVSPLGSS----CRSDGSSQIIISDE 582

Query: 539  GANSTEND-VMSEKPEHAYLSPLKVLLVSHSSSDEVC--------------------QVG 655
                 E+  +M    + +    L+    S  S   +C                    +V 
Sbjct: 583  SQRELESSCLMDSSDDRSLHRILRSRSDSSPSDSSICTPDSLNYTTLRGSTLLGVSREVE 642

Query: 656  FDKKEVKNLASMDMESADEGSSGRQFECANDIGKLKPEQHILNGKNDGMESAANSYGNVN 835
             D    K+L + ++ S  E        C+ D+   +  Q+   G+  G     +  G +N
Sbjct: 643  LDSSNTKSLPNKEVLSPCEDI------CSRDVQTFQVLQNDEKGEILG-SLHQDIVGQLN 695

Query: 836  VSCGDGSNENGRLESVAGCCRITGSNELTDSQT-----SSLGNACEVDSGLLTENRSLNE 1000
              C     +    ES+    R+T SN  T + T     S      ++  G L+ N  L  
Sbjct: 696  EPC----IQTRCAESLE---RVTVSNSNTQNLTCEGDISLADRISQLGDGCLSGNGELG- 747

Query: 1001 CEAFQDGVVEDLEPNVTLEVFIKAREVVDSESLQKPVIRLSLTTTA 1138
                 +G+ E  +PN++L   ++ ++   SE++Q+  IRLSL +TA
Sbjct: 748  -----NGLAEMSQPNLSLTRAMEPQDGTSSEAVQEAAIRLSLESTA 788


>ref|XP_007012187.1| Poly(A) polymerase 1 isoform 6 [Theobroma cacao]
           gi|508782550|gb|EOY29806.1| Poly(A) polymerase 1 isoform
           6 [Theobroma cacao]
          Length = 751

 Score =  202 bits (513), Expect = 3e-49
 Identities = 103/162 (63%), Positives = 122/162 (75%), Gaps = 1/162 (0%)
 Frame = +2

Query: 2   IERDTCGVLQCHPYPTEYVDSSKQSSHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFRHS 181
           IERDT G+LQCHPYP EYVD+SKQ  HCAFFMGLQRK+GV  QEGQQFDIRGTVDEFR  
Sbjct: 406 IERDTNGMLQCHPYPNEYVDTSKQFPHCAFFMGLQRKEGVSGQEGQQFDIRGTVDEFRQE 465

Query: 182 VNLYMFWKPGMKIYVSCVRRKQLPQFVFPDGYRQHRPSRVTCQQRQSEKTYHVSEECRVG 361
           +++YM+WKPGM IYVS VRR+QLP FVFPDGY++ R SR   Q  Q+ K        + G
Sbjct: 466 ISMYMYWKPGMDIYVSHVRRRQLPAFVFPDGYKRPRSSRHPGQ--QTGKICEDITRSQSG 523

Query: 362 SEERRLKRKKNGEVVDLTPNKPEKRASI-PHRLESIYPESSS 484
           S ER++KRK   E  D   +KP+KR+SI P RLES+ PESS+
Sbjct: 524 SVERQIKRKHEDEAFDEKMDKPDKRSSISPQRLESVSPESSA 565


>ref|XP_006366691.1| PREDICTED: poly(A) polymerase-like isoform X2 [Solanum tuberosum]
          Length = 781

 Score =  200 bits (508), Expect = 1e-48
 Identities = 150/393 (38%), Positives = 205/393 (52%), Gaps = 14/393 (3%)
 Frame = +2

Query: 2    IERDTCGVLQCHPYPTEYVDSSKQSSHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFRHS 181
            IERDT G+LQCHPYP E+VD SK   HCAFFMGL RKQGVKVQEGQQFDIRGTVDEF+  
Sbjct: 411  IERDTNGMLQCHPYPNEFVDLSKPCPHCAFFMGLHRKQGVKVQEGQQFDIRGTVDEFKQD 470

Query: 182  VNLYMFWKPGMKIYVSCVRRKQLPQFVFPDGYRQHRPSRVTCQQRQSEKTYHVSEECRVG 361
            V++Y +W+PGM IYVS VRRKQ+P FVFPDGY++ R  R T      +    V++ C + 
Sbjct: 471  VSMYAYWRPGMDIYVSHVRRKQIPPFVFPDGYKRPRQPRNTSHSTPEK----VAKGC-MS 525

Query: 362  SEERRLKRKKNGEVVDLTPNKPEKRASI-PHRLESIYP-ESSSRPRRAYQ-VGSSESKLD 532
             EER+ KRK+  E V++   KP KRASI P R+ S+ P  SS R   + Q + S ES+ +
Sbjct: 526  PEERQPKRKQETETVNVNLGKPGKRASISPQRIGSVSPLGSSCRSDGSSQIIISDESQRE 585

Query: 533  FTGANSTENDVMSEKPEHAYLSPLKVLLVSHSSSDEVCQVGFDKKEVKNLASMDMESADE 712
            F   +S   D   +   H  L        S SS      + +       L  +  E   +
Sbjct: 586  F--ESSCLMDSSDDGSLHRILRSRSDASPSDSSICTPDSLNYTTSRGSILLGVSREVDLD 643

Query: 713  GSSGRQFE-----------CANDIGKLKPEQHILNGKNDGMESAANSYGNVNVSCGDGSN 859
             S+   F            C  D+   +  Q+   G+  G     +  G +N  C     
Sbjct: 644  SSNTISFPSKEVPGPCEDICTRDVQTFQVLQNDEKGEILG-SLHQDIVGQLNEPC----I 698

Query: 860  ENGRLESVAGCCRITGSNELTDSQTSSLGNACEVDSGLLTENRSLNECEAFQDGVVEDLE 1039
            + G  ES+    R+  SN    + T      CE D  L      L + E   +G  E  +
Sbjct: 699  QTGCAESLE---RVPVSNSNIHNLT------CEGDISLADRISQLGDGE-LGNGFAEMSQ 748

Query: 1040 PNVTLEVFIKAREVVDSESLQKPVIRLSLTTTA 1138
            PN++L   ++ ++  +SE++Q+  IRLSL +TA
Sbjct: 749  PNLSLARAMEPQDGTNSEAVQEAAIRLSLESTA 781


>gb|EXB60284.1| Poly(A) polymerase [Morus notabilis]
          Length = 668

 Score =  198 bits (503), Expect = 4e-48
 Identities = 103/162 (63%), Positives = 123/162 (75%), Gaps = 1/162 (0%)
 Frame = +2

Query: 2   IERDTCGVLQCHPYPTEYVDSSKQSSHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFRHS 181
           IERDT G+LQCHPYP EY+D+S+  SHCAFFMGLQRK+GV+ QEGQQFDIRGTVDEFR  
Sbjct: 381 IERDTNGMLQCHPYPHEYIDTSRPCSHCAFFMGLQRKEGVRGQEGQQFDIRGTVDEFRQE 440

Query: 182 VNLYMFWKPGMKIYVSCVRRKQLPQFVFPDGYRQHRPSRVTCQQRQSEKTYHVSEECRVG 361
           VN+YMFWKPGM IYVS VRRKQLP FVFPDGY++ R SR      Q+ KT   +  C+  
Sbjct: 441 VNMYMFWKPGMDIYVSHVRRKQLPTFVFPDGYKRPRLSRHVIP--QAIKTCEDTVGCQPC 498

Query: 362 SEERRLKRKKNGEVVDLTPNKPEKRASI-PHRLESIYPESSS 484
           + E+  KRK + E VD+   KPEKRASI P R+ S+ PE+S+
Sbjct: 499 ATEK--KRKNDSEAVDVKSIKPEKRASISPQRVASLSPENST 538


>gb|EXB74588.1| Poly(A) polymerase [Morus notabilis]
          Length = 848

 Score =  197 bits (500), Expect = 1e-47
 Identities = 136/359 (37%), Positives = 192/359 (53%), Gaps = 27/359 (7%)
 Frame = +2

Query: 2    IERDTCGVLQCHPYPTEYVDSSKQSSHCAFFMGLQRKQGVKVQEGQQFDIRGTVDEFRHS 181
            IERDT G LQCHPYP EY+D++KQ +HCAFFMGLQRKQG  +QEGQQFDIRG+VDEFRHS
Sbjct: 407  IERDTIGKLQCHPYPHEYIDATKQCAHCAFFMGLQRKQGETIQEGQQFDIRGSVDEFRHS 466

Query: 182  VNLYMFWKPGMKIYVSCVRRKQLPQFVFPDGYRQHRPSRVTCQQRQSEKTYHVSEECRVG 361
            +N+YMFWKPGM+IYVS VR++Q+P +VFPDGYR+ RPSR+      + KT   SE+ R  
Sbjct: 467  INMYMFWKPGMEIYVSHVRKRQIPSYVFPDGYRRPRPSRLI-----TPKTDKPSEDKRSQ 521

Query: 362  SEERR--LKRKKNGEVVDLTPNKPEKRASI-PHRLESIYPESSSRPRRAYQVG-----SS 517
            ++  R  LK+KK  EV+D     PEK+ SI P +  SI PE           G      S
Sbjct: 522  NDSGRHYLKQKKGTEVLDNKVGSPEKQQSIGPQQHSSISPEIVDHRISGVSTGLKRKRDS 581

Query: 518  ESKLDFTG--------ANSTENDVMSEKPEHAY--LSP-----LKVLLVSHSSSDEVCQV 652
            ++  D  G        +   ++ + SE   H+   +SP     +    VS      + ++
Sbjct: 582  DALNDKLGTPEKQQCTSPQQDSSISSESSVHSLSCVSPQQHNSMSSNTVSTDHLPSIMEI 641

Query: 653  GFDKKEVKNLASMDMESADEGSSGRQFECA----NDIGKLKPEQHILNGKNDGMESAANS 820
              +K  V +      ++  E S+G  +        +  K    + +++    G  S  NS
Sbjct: 642  AVEKNMVHH-----ADTLREASTGTDYVKGVLRLIETDKSSNVELVVSETETGCTS--NS 694

Query: 821  YGNVNVSCGDGSNENGRLESVAGCCRITGSNELTDSQTSSLGNACEVDSGLLTENRSLN 997
                NV+    S E+   E+V       GS + ++   S  G++CE D   L +N  +N
Sbjct: 695  SVITNVTSEGTSCEDVGFETVTVTGSPEGSVQDSNDPESVQGDSCEADFEQLLQNGFVN 753