BLASTX nr result
ID: Sinomenium22_contig00008593
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00008593
(686 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putativ... 137 3e-30
emb|CBI40063.3| unnamed protein product [Vitis vinifera] 127 3e-27
ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 prote... 127 3e-27
ref|XP_006373253.1| Sister chromatid cohesion 1 protein 2 [Popul... 116 6e-24
ref|XP_006470017.1| PREDICTED: sister chromatid cohesion 1 prote... 114 2e-23
ref|XP_006447122.1| hypothetical protein CICLE_v10014314mg [Citr... 114 2e-23
ref|XP_006447121.1| hypothetical protein CICLE_v10014314mg [Citr... 114 2e-23
ref|XP_004305921.1| PREDICTED: sister chromatid cohesion 1 prote... 101 2e-19
gb|EXC31357.1| Sister chromatid cohesion 1 protein 2 [Morus nota... 100 6e-19
ref|XP_007019637.1| Rad21/Rec8-like family protein isoform 3 [Th... 96 1e-17
ref|XP_007019636.1| Rad21/Rec8-like family protein isoform 2 [Th... 96 1e-17
ref|XP_007019635.1| Rad21/Rec8-like family protein isoform 1 [Th... 96 1e-17
ref|XP_006338678.1| PREDICTED: sister chromatid cohesion 1 prote... 95 2e-17
ref|XP_004305922.1| PREDICTED: sister chromatid cohesion 1 prote... 92 2e-16
ref|XP_006845133.1| hypothetical protein AMTR_s00005p00204930 [A... 87 4e-15
ref|XP_003581370.1| PREDICTED: uncharacterized protein LOC100843... 81 4e-13
ref|NP_568586.2| sister chromatid cohesion 1 protein 2 [Arabidop... 79 1e-12
gb|AAG44842.1|AF281154_1 cohesion family protein SYN2 [Arabidops... 79 1e-12
dbj|BAB11346.1| unnamed protein product [Arabidopsis thaliana] 79 1e-12
ref|NP_001119344.1| sister chromatid cohesion 1 protein 2 [Arabi... 79 1e-12
>ref|XP_002509552.1| Sister chromatid cohesion 1 protein, putative [Ricinus communis]
gi|223549451|gb|EEF50939.1| Sister chromatid cohesion 1
protein, putative [Ricinus communis]
Length = 781
Score = 137 bits (345), Expect = 3e-30
Identities = 94/245 (38%), Positives = 129/245 (52%), Gaps = 18/245 (7%)
Frame = +1
Query: 4 KRILSPHLIDA----DLVGSSSPNMIIKETSMEKPLDNQFPHEARRQLDLFCGDEAPFEI 171
K+I P L A D V N+ E S+EK +N E R +++FC E P E
Sbjct: 285 KQIKVPDLTQAENENDEVIKEDCNISNLEVSIEKLRENMVAQEECRDIEMFCMVEEPPEE 344
Query: 172 GA--------------LYNQTLVEEPLDLDTQCKNTPQQAKRINFLEITPLDLEILHAPL 309
LY + E P D + A+ L++T A L
Sbjct: 345 NRSIPDKHKSNTEHKMLYR--VDELPEDTRPFGEEHQSSAEHETLLQMTSPRNSTYEA-L 401
Query: 310 SEGHLLANTMEKTPDEPKIPSDSGAVTPEFLVIRTPAKKEQLRISRKRKHPFDDTVVLSN 489
+E H L+ T++ TP P+ P+ SGA+TPE VI TPA KE R+ RKRK FDDT+V N
Sbjct: 402 TEDHPLSVTLDTTP-RPRFPNASGAMTPEISVIPTPAAKEGARVPRKRKCVFDDTIVFPN 460
Query: 490 DVVRQSLHDSSSLTVRRRKAPSTALDVWKACKISRLSEDFLEPLIPCTSSKLKGLSHNRN 669
+V++Q + DSS L +R+KAP TAL W+A ++SRL FLE LIPCT+S L+ L +
Sbjct: 461 NVIKQCIEDSSDLVSKRKKAPHTALTAWRASRVSRLPRCFLESLIPCTASDLRSLLSGKK 520
Query: 670 IKISD 684
+KIS+
Sbjct: 521 LKISE 525
>emb|CBI40063.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 127 bits (319), Expect = 3e-27
Identities = 84/229 (36%), Positives = 124/229 (54%), Gaps = 9/229 (3%)
Frame = +1
Query: 13 LSPHLIDADLVGSSSPNMIIKETSMEKPLDNQFPHEARRQLDLFCGDEAPFEIGALYN-- 186
L P L+D + SS ++ E SMEK D F L LF +IG ++
Sbjct: 213 LLPCLMDTAQLVSSLHDLSSIEASMEKFRDCSFSQGECLDLQLF--HRVEIDIGGPFDGE 270
Query: 187 ------QTLVEEPLDLDTQCKNTPQQAKRINFLEITPLD-LEILHAPLSEGHLLANTMEK 345
QT +E + + + T + N + TP L++ +EGH + NT++
Sbjct: 271 HHSNGEQTSLEMTSSENRRHQVTIECHSVPNTFDATPQSKLQVT----AEGHRVTNTLDA 326
Query: 346 TPDEPKIPSDSGAVTPEFLVIRTPAKKEQLRISRKRKHPFDDTVVLSNDVVRQSLHDSSS 525
TP E +P SG+ TPEF+++ TP KKE RI RKRK FD+ +VLS++ +++S+ SS
Sbjct: 327 TP-ESNLPDASGSTTPEFIIVHTPTKKEHARIPRKRKCLFDEKIVLSSEFLKKSIQSSSD 385
Query: 526 LTVRRRKAPSTALDVWKACKISRLSEDFLEPLIPCTSSKLKGLSHNRNI 672
L +RRK P TA D WK +I+ LS+ FLE LIPC S +L+ L H + +
Sbjct: 386 LIRKRRKVPHTAYDAWKVYQIANLSQGFLEALIPCISLELRSLFHAKKL 434
>ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Vitis
vinifera]
Length = 756
Score = 127 bits (319), Expect = 3e-27
Identities = 84/229 (36%), Positives = 124/229 (54%), Gaps = 9/229 (3%)
Frame = +1
Query: 13 LSPHLIDADLVGSSSPNMIIKETSMEKPLDNQFPHEARRQLDLFCGDEAPFEIGALYN-- 186
L P L+D + SS ++ E SMEK D F L LF +IG ++
Sbjct: 348 LLPCLMDTAQLVSSLHDLSSIEASMEKFRDCSFSQGECLDLQLF--HRVEIDIGGPFDGE 405
Query: 187 ------QTLVEEPLDLDTQCKNTPQQAKRINFLEITPLD-LEILHAPLSEGHLLANTMEK 345
QT +E + + + T + N + TP L++ +EGH + NT++
Sbjct: 406 HHSNGEQTSLEMTSSENRRHQVTIECHSVPNTFDATPQSKLQVT----AEGHRVTNTLDA 461
Query: 346 TPDEPKIPSDSGAVTPEFLVIRTPAKKEQLRISRKRKHPFDDTVVLSNDVVRQSLHDSSS 525
TP E +P SG+ TPEF+++ TP KKE RI RKRK FD+ +VLS++ +++S+ SS
Sbjct: 462 TP-ESNLPDASGSTTPEFIIVHTPTKKEHARIPRKRKCLFDEKIVLSSEFLKKSIQSSSD 520
Query: 526 LTVRRRKAPSTALDVWKACKISRLSEDFLEPLIPCTSSKLKGLSHNRNI 672
L +RRK P TA D WK +I+ LS+ FLE LIPC S +L+ L H + +
Sbjct: 521 LIRKRRKVPHTAYDAWKVYQIANLSQGFLEALIPCISLELRSLFHAKKL 569
>ref|XP_006373253.1| Sister chromatid cohesion 1 protein 2 [Populus trichocarpa]
gi|550319959|gb|ERP51050.1| Sister chromatid cohesion 1
protein 2 [Populus trichocarpa]
Length = 770
Score = 116 bits (291), Expect = 6e-24
Identities = 76/203 (37%), Positives = 105/203 (51%)
Frame = +1
Query: 76 ETSMEKPLDNQFPHEARRQLDLFCGDEAPFEIGALYNQTLVEEPLDLDTQCKNTPQQAKR 255
E S+EK L+++F E + F E P E +N+ + +T T KR
Sbjct: 282 EVSIEKLLESRFFQEECMDANTFLAVEEPPEHARPFNEE--HQSNAGNTSLPETTTLGKR 339
Query: 256 INFLEITPLDLEILHAPLSEGHLLANTMEKTPDEPKIPSDSGAVTPEFLVIRTPAKKEQL 435
L +SE H L ++ TP + K SGA TPEF+VI TPA KE
Sbjct: 340 KQQL-------------VSEDHPLYIKLDATP-QSKFKDVSGANTPEFMVISTPAAKEHA 385
Query: 436 RISRKRKHPFDDTVVLSNDVVRQSLHDSSSLTVRRRKAPSTALDVWKACKISRLSEDFLE 615
R RKRK FDD VV N+V+++ + ++ L +RRK P TA VWKAC+ S L + FLE
Sbjct: 386 RALRKRKCFFDDVVVFPNNVIKECIENTGDLVSKRRKLPHTAFAVWKACRFSNLDKCFLE 445
Query: 616 PLIPCTSSKLKGLSHNRNIKISD 684
PLIPC S +L L + ++I +
Sbjct: 446 PLIPCASLELGSLFRTKKLQIPE 468
>ref|XP_006470017.1| PREDICTED: sister chromatid cohesion 1 protein 2-like isoform X2
[Citrus sinensis]
Length = 775
Score = 114 bits (286), Expect = 2e-23
Identities = 60/120 (50%), Positives = 78/120 (65%)
Frame = +1
Query: 325 LANTMEKTPDEPKIPSDSGAVTPEFLVIRTPAKKEQLRISRKRKHPFDDTVVLSNDVVRQ 504
L+ T++ TP + K SGA TPEF+V++TPA KE RISRKRK FDD V NDV+RQ
Sbjct: 372 LSVTVDATP-QSKFLDASGATTPEFMVVQTPATKECARISRKRKCCFDDVTVFPNDVMRQ 430
Query: 505 SLHDSSSLTVRRRKAPSTALDVWKACKISRLSEDFLEPLIPCTSSKLKGLSHNRNIKISD 684
+ D+S L +RRK P T L WKA +IS LS+ FL PL+PC S +L+ +KI +
Sbjct: 431 CIQDASDLVSKRRKVPRTVLAAWKASRISNLSQGFLLPLLPCISLELRAFLCQERLKIPE 490
>ref|XP_006447122.1| hypothetical protein CICLE_v10014314mg [Citrus clementina]
gi|568831532|ref|XP_006470016.1| PREDICTED: sister
chromatid cohesion 1 protein 2-like isoform X1 [Citrus
sinensis] gi|557549733|gb|ESR60362.1| hypothetical
protein CICLE_v10014314mg [Citrus clementina]
Length = 802
Score = 114 bits (286), Expect = 2e-23
Identities = 60/120 (50%), Positives = 78/120 (65%)
Frame = +1
Query: 325 LANTMEKTPDEPKIPSDSGAVTPEFLVIRTPAKKEQLRISRKRKHPFDDTVVLSNDVVRQ 504
L+ T++ TP + K SGA TPEF+V++TPA KE RISRKRK FDD V NDV+RQ
Sbjct: 372 LSVTVDATP-QSKFLDASGATTPEFMVVQTPATKECARISRKRKCCFDDVTVFPNDVMRQ 430
Query: 505 SLHDSSSLTVRRRKAPSTALDVWKACKISRLSEDFLEPLIPCTSSKLKGLSHNRNIKISD 684
+ D+S L +RRK P T L WKA +IS LS+ FL PL+PC S +L+ +KI +
Sbjct: 431 CIQDASDLVSKRRKVPRTVLAAWKASRISNLSQGFLLPLLPCISLELRAFLCQERLKIPE 490
>ref|XP_006447121.1| hypothetical protein CICLE_v10014314mg [Citrus clementina]
gi|557549732|gb|ESR60361.1| hypothetical protein
CICLE_v10014314mg [Citrus clementina]
Length = 724
Score = 114 bits (286), Expect = 2e-23
Identities = 60/120 (50%), Positives = 78/120 (65%)
Frame = +1
Query: 325 LANTMEKTPDEPKIPSDSGAVTPEFLVIRTPAKKEQLRISRKRKHPFDDTVVLSNDVVRQ 504
L+ T++ TP + K SGA TPEF+V++TPA KE RISRKRK FDD V NDV+RQ
Sbjct: 372 LSVTVDATP-QSKFLDASGATTPEFMVVQTPATKECARISRKRKCCFDDVTVFPNDVMRQ 430
Query: 505 SLHDSSSLTVRRRKAPSTALDVWKACKISRLSEDFLEPLIPCTSSKLKGLSHNRNIKISD 684
+ D+S L +RRK P T L WKA +IS LS+ FL PL+PC S +L+ +KI +
Sbjct: 431 CIQDASDLVSKRRKVPRTVLAAWKASRISNLSQGFLLPLLPCISLELRAFLCQERLKIPE 490
>ref|XP_004305921.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Fragaria
vesca subsp. vesca]
Length = 772
Score = 101 bits (252), Expect = 2e-19
Identities = 76/229 (33%), Positives = 112/229 (48%), Gaps = 33/229 (14%)
Frame = +1
Query: 88 EKPLDNQFPHEARRQLDLFCGDEAPFEIGALYNQ-TLVEEP---LDL---DTQCKNTPQQ 246
E L N E LD+ CG + P + Y + L EP LD+ DT KN P++
Sbjct: 307 EHSLRNLKAQEKSMDLDVLCGAKKPQDRVCSYGEENLNAEPAKVLDMMSPDTM-KNIPEE 365
Query: 247 -----------AKRINFLEITPLDLEILHAPLSEGHLLA-NTMEKTPDEP---------- 360
AK+ L + + + P ++A +TM+ P+E
Sbjct: 366 DPESFSVEYDGAKKPQELVCSYGEENLNAEPAKVLDMMAPDTMKNIPEEDPESVSVEYDG 425
Query: 361 ----KIPSDSGAVTPEFLVIRTPAKKEQLRISRKRKHPFDDTVVLSNDVVRQSLHDSSSL 528
K P G TP+ + + PA K +ISRKRK FDD V+L ++V+RQS+HD+S L
Sbjct: 426 SPDAKQPDALGVTTPKLVAVPRPASKRSAQISRKRKCVFDDIVMLPSEVIRQSIHDASDL 485
Query: 529 TVRRRKAPSTALDVWKACKISRLSEDFLEPLIPCTSSKLKGLSHNRNIK 675
+RRK P A VW+ C+I L+++FLEPLI S +L+ L R ++
Sbjct: 486 VAKRRKVPKNAHAVWQTCQIRNLAQNFLEPLISNVSQELRSLLCKRKLR 534
>gb|EXC31357.1| Sister chromatid cohesion 1 protein 2 [Morus notabilis]
Length = 900
Score = 100 bits (248), Expect = 6e-19
Identities = 61/147 (41%), Positives = 83/147 (56%), Gaps = 23/147 (15%)
Frame = +1
Query: 307 LSEGHLLANTMEKTPDEPKIPSDSGA-----------------------VTPEFLVIRTP 417
L EG L +++TP E K+P SGA TP+F+ I TP
Sbjct: 475 LGEGEPLFIELDRTP-EIKVPDASGASTLQYMGISTPATKERSLVNARAATPKFISIPTP 533
Query: 418 AKKEQLRISRKRKHPFDDTVVLSNDVVRQSLHDSSSLTVRRRKAPSTALDVWKACKISRL 597
A KE+ +ISRKRK FDD +VL N V++ S++D+S L +RRK TAL VW+A + L
Sbjct: 534 ATKERAQISRKRKCIFDDVIVLPNKVLKTSIYDASDLVSKRRKVAQTALAVWRASR--SL 591
Query: 598 SEDFLEPLIPCTSSKLKGLSHNRNIKI 678
+F EPLIPC SS+L+ L + +KI
Sbjct: 592 HNEFFEPLIPCASSELRSLFSVKKLKI 618
>ref|XP_007019637.1| Rad21/Rec8-like family protein isoform 3 [Theobroma cacao]
gi|508724965|gb|EOY16862.1| Rad21/Rec8-like family
protein isoform 3 [Theobroma cacao]
Length = 797
Score = 95.9 bits (237), Expect = 1e-17
Identities = 54/123 (43%), Positives = 77/123 (62%)
Frame = +1
Query: 310 SEGHLLANTMEKTPDEPKIPSDSGAVTPEFLVIRTPAKKEQLRISRKRKHPFDDTVVLSN 489
++ H L T TP + K+ SGA TP F+ IRTP KE+ R+SRKRK FDD +V N
Sbjct: 522 AKDHSLLVTSYATP-QSKLRGASGATTPHFMPIRTPVTKERARLSRKRKCVFDDMIVFPN 580
Query: 490 DVVRQSLHDSSSLTVRRRKAPSTALDVWKACKISRLSEDFLEPLIPCTSSKLKGLSHNRN 669
D++RQ + D+S L +RRK TALD K ++ LS+ F E +PCT S+LK L + +
Sbjct: 581 DLMRQWIKDASDLVSKRRKC--TALDARKTHRVFNLSQSFSEASVPCT-SELKSLYYGKR 637
Query: 670 IKI 678
+++
Sbjct: 638 LRL 640
>ref|XP_007019636.1| Rad21/Rec8-like family protein isoform 2 [Theobroma cacao]
gi|508724964|gb|EOY16861.1| Rad21/Rec8-like family
protein isoform 2 [Theobroma cacao]
Length = 856
Score = 95.9 bits (237), Expect = 1e-17
Identities = 54/123 (43%), Positives = 77/123 (62%)
Frame = +1
Query: 310 SEGHLLANTMEKTPDEPKIPSDSGAVTPEFLVIRTPAKKEQLRISRKRKHPFDDTVVLSN 489
++ H L T TP + K+ SGA TP F+ IRTP KE+ R+SRKRK FDD +V N
Sbjct: 522 AKDHSLLVTSYATP-QSKLRGASGATTPHFMPIRTPVTKERARLSRKRKCVFDDMIVFPN 580
Query: 490 DVVRQSLHDSSSLTVRRRKAPSTALDVWKACKISRLSEDFLEPLIPCTSSKLKGLSHNRN 669
D++RQ + D+S L +RRK TALD K ++ LS+ F E +PCT S+LK L + +
Sbjct: 581 DLMRQWIKDASDLVSKRRKC--TALDARKTHRVFNLSQSFSEASVPCT-SELKSLYYGKR 637
Query: 670 IKI 678
+++
Sbjct: 638 LRL 640
>ref|XP_007019635.1| Rad21/Rec8-like family protein isoform 1 [Theobroma cacao]
gi|508724963|gb|EOY16860.1| Rad21/Rec8-like family
protein isoform 1 [Theobroma cacao]
Length = 887
Score = 95.9 bits (237), Expect = 1e-17
Identities = 54/123 (43%), Positives = 77/123 (62%)
Frame = +1
Query: 310 SEGHLLANTMEKTPDEPKIPSDSGAVTPEFLVIRTPAKKEQLRISRKRKHPFDDTVVLSN 489
++ H L T TP + K+ SGA TP F+ IRTP KE+ R+SRKRK FDD +V N
Sbjct: 522 AKDHSLLVTSYATP-QSKLRGASGATTPHFMPIRTPVTKERARLSRKRKCVFDDMIVFPN 580
Query: 490 DVVRQSLHDSSSLTVRRRKAPSTALDVWKACKISRLSEDFLEPLIPCTSSKLKGLSHNRN 669
D++RQ + D+S L +RRK TALD K ++ LS+ F E +PCT S+LK L + +
Sbjct: 581 DLMRQWIKDASDLVSKRRKC--TALDARKTHRVFNLSQSFSEASVPCT-SELKSLYYGKR 637
Query: 670 IKI 678
+++
Sbjct: 638 LRL 640
>ref|XP_006338678.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Solanum
tuberosum]
Length = 627
Score = 94.7 bits (234), Expect = 2e-17
Identities = 44/88 (50%), Positives = 64/88 (72%)
Frame = +1
Query: 376 SGAVTPEFLVIRTPAKKEQLRISRKRKHPFDDTVVLSNDVVRQSLHDSSSLTVRRRKAPS 555
SG+ +P+F+ +RTPAKKE+ RISRKRK FD+++V+ N+V + + D++ L +RRKAP
Sbjct: 369 SGSTSPDFISVRTPAKKERTRISRKRKCIFDESIVIPNEVFKHWIGDANDLVCKRRKAPH 428
Query: 556 TALDVWKACKISRLSEDFLEPLIPCTSS 639
++ WK KIS L + F EPLIPC+ S
Sbjct: 429 SSYFAWKVHKISSLPQSFEEPLIPCSLS 456
>ref|XP_004305922.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Fragaria
vesca subsp. vesca]
Length = 560
Score = 92.0 bits (227), Expect = 2e-16
Identities = 48/97 (49%), Positives = 63/97 (64%), Gaps = 3/97 (3%)
Frame = +1
Query: 379 GAVTPEFL-VIRTPAKKEQLRISRKRKHP--FDDTVVLSNDVVRQSLHDSSSLTVRRRKA 549
G TP+ VI TPA ++ RISRKRK D+ VL N V++QS++D+S L +RRK
Sbjct: 414 GVTTPKLRRVIPTPAIRKAARISRKRKRRCRIDEITVLPNAVIKQSINDASDLVSKRRKV 473
Query: 550 PSTALDVWKACKISRLSEDFLEPLIPCTSSKLKGLSH 660
P TALD WK C+I LS+ FLEP IP S +++ L H
Sbjct: 474 PETALDAWKTCQIRNLSQTFLEPFIPSVSEEIRSLFH 510
>ref|XP_006845133.1| hypothetical protein AMTR_s00005p00204930 [Amborella trichopoda]
gi|548847646|gb|ERN06808.1| hypothetical protein
AMTR_s00005p00204930 [Amborella trichopoda]
Length = 606
Score = 87.4 bits (215), Expect = 4e-15
Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 9/201 (4%)
Frame = +1
Query: 52 SSPNMIIKETSMEKPLDNQFP-HEARR-QLDLFCGDEAPFEIGALYNQTLVEEPLDLDTQ 225
S NM E LD+ P H+ R +L+ + E P + L N + + +
Sbjct: 183 SHHNMGTYEVDSGSDLDSFIPKHDGNRLRLEEYPDSEMPRNVDELLNSGI--HAMQSNEL 240
Query: 226 CKNTPQQAK--RINFLEITPL---DLEILHAPLSEGHLLANTMEKTPDEPK--IPSDSGA 384
CK+ +Q R L T L + + + S L + PK +P G
Sbjct: 241 CKDANEQVDHGRNVILPETLLPSPERTCVSSGFSPSSLQMPVVGTPAGTPKSVVPPAFGE 300
Query: 385 VTPEFLVIRTPAKKEQLRISRKRKHPFDDTVVLSNDVVRQSLHDSSSLTVRRRKAPSTAL 564
TPE++V+ TP +E+ SRKRKH FD+++VLSN+ +RQ L D+S+L +RRK P TA
Sbjct: 301 FTPEYMVLPTPKAQERTPKSRKRKHFFDESIVLSNEHMRQRLQDASNLLRKRRKPPLTAF 360
Query: 565 DVWKACKISRLSEDFLEPLIP 627
D+W+A ++S + + +E +P
Sbjct: 361 DIWQAYRVSHMHQLLMESWVP 381
>ref|XP_003581370.1| PREDICTED: uncharacterized protein LOC100843631 [Brachypodium
distachyon]
Length = 741
Score = 80.9 bits (198), Expect = 4e-13
Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 26/124 (20%)
Frame = +1
Query: 340 EKTPDEPKIPSDSGAVTPEFLVIRTPAKKEQLRISRKR----------------KHP--- 462
E +P P+ ++ PE ++ TPAK E+ +++RKR KH
Sbjct: 382 ELSPSTPEPMTEKTTGLPEKFIVTTPAKNEKRQVTRKRRRGLYKKDNIDTPTNRKHKRQV 441
Query: 463 -------FDDTVVLSNDVVRQSLHDSSSLTVRRRKAPSTALDVWKACKISRLSEDFLEPL 621
+D+ +VL ND++RQ++ D+S L +RRKAP T LD WK KIS L + ++PL
Sbjct: 442 KKGAEVLYDEDIVLPNDMMRQAIEDASDLVCKRRKAPHTYLDAWKVAKISSLPDTLMDPL 501
Query: 622 IPCT 633
PC+
Sbjct: 502 FPCS 505
>ref|NP_568586.2| sister chromatid cohesion 1 protein 2 [Arabidopsis thaliana]
gi|30913286|sp|Q9FQ20.2|SCC12_ARATH RecName: Full=Sister
chromatid cohesion 1 protein 2; AltName: Full=SCC1
homolog 2; Short=AtRAD21-1
gi|18157643|gb|AAL62057.1|AF400126_1 RAD21-1 variant 1
[Arabidopsis thaliana] gi|332007220|gb|AED94603.1|
cohesion family protein SYN2 (SYN2) [Arabidopsis
thaliana]
Length = 810
Score = 79.0 bits (193), Expect = 1e-12
Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
Frame = +1
Query: 283 DLEILHAPLSEGHLLANTMEKTPDEP-KIPSDSGAVTPEFLVIRTPAKKEQLRISRKRKH 459
D+ + P SE + + TP P ++ G +P+F +I TPA KE R+SRKRK
Sbjct: 405 DMTVSKDPSSEFNATDTPVTVTPKTPSRLKISEGGTSPQFSIIPTPAAKESSRVSRKRKC 464
Query: 460 PFDDTVVLSNDVVRQSLHDSSSLTVRRRKAPSTALDVWKACKISRLSEDFLEPLIPCTSS 639
DD V++ N V+++ + DSS L +RR P T + + + FLEPLI SS
Sbjct: 465 LIDDEVIIPNKVMKEMIEDSSKLLAKRRNVPHTDCPERRTKRFANPFRSFLEPLIQYGSS 524
Query: 640 KLKGL 654
L+ L
Sbjct: 525 DLQSL 529
>gb|AAG44842.1|AF281154_1 cohesion family protein SYN2 [Arabidopsis thaliana]
Length = 809
Score = 79.0 bits (193), Expect = 1e-12
Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
Frame = +1
Query: 283 DLEILHAPLSEGHLLANTMEKTPDEP-KIPSDSGAVTPEFLVIRTPAKKEQLRISRKRKH 459
D+ + P SE + + TP P ++ G +P+F +I TPA KE R+SRKRK
Sbjct: 405 DMTVSKDPSSEFNATDTPVTVTPKTPSRLKISEGGTSPQFSIIPTPAAKESSRVSRKRKC 464
Query: 460 PFDDTVVLSNDVVRQSLHDSSSLTVRRRKAPSTALDVWKACKISRLSEDFLEPLIPCTSS 639
DD V++ N V+++ + DSS L +RR P T + + + FLEPLI SS
Sbjct: 465 LIDDEVIIPNKVMKEMIEDSSKLLAKRRNVPHTDCPERRTKRFANPFRSFLEPLIQYGSS 524
Query: 640 KLKGL 654
L+ L
Sbjct: 525 DLQSL 529
>dbj|BAB11346.1| unnamed protein product [Arabidopsis thaliana]
Length = 901
Score = 79.0 bits (193), Expect = 1e-12
Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
Frame = +1
Query: 283 DLEILHAPLSEGHLLANTMEKTPDEP-KIPSDSGAVTPEFLVIRTPAKKEQLRISRKRKH 459
D+ + P SE + + TP P ++ G +P+F +I TPA KE R+SRKRK
Sbjct: 431 DMTVSKDPSSEFNATDTPVTVTPKTPSRLKISEGGTSPQFSIIPTPAAKESSRVSRKRKC 490
Query: 460 PFDDTVVLSNDVVRQSLHDSSSLTVRRRKAPSTALDVWKACKISRLSEDFLEPLIPCTSS 639
DD V++ N V+++ + DSS L +RR P T + + + FLEPLI SS
Sbjct: 491 LIDDEVIIPNKVMKEMIEDSSKLLAKRRNVPHTDCPERRTKRFANPFRSFLEPLIQYGSS 550
Query: 640 KLKGL 654
L+ L
Sbjct: 551 DLQSL 555
>ref|NP_001119344.1| sister chromatid cohesion 1 protein 2 [Arabidopsis thaliana]
gi|332007221|gb|AED94604.1| cohesion family protein SYN2
(SYN2) [Arabidopsis thaliana]
Length = 678
Score = 79.0 bits (193), Expect = 1e-12
Identities = 45/125 (36%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
Frame = +1
Query: 283 DLEILHAPLSEGHLLANTMEKTPDEP-KIPSDSGAVTPEFLVIRTPAKKEQLRISRKRKH 459
D+ + P SE + + TP P ++ G +P+F +I TPA KE R+SRKRK
Sbjct: 273 DMTVSKDPSSEFNATDTPVTVTPKTPSRLKISEGGTSPQFSIIPTPAAKESSRVSRKRKC 332
Query: 460 PFDDTVVLSNDVVRQSLHDSSSLTVRRRKAPSTALDVWKACKISRLSEDFLEPLIPCTSS 639
DD V++ N V+++ + DSS L +RR P T + + + FLEPLI SS
Sbjct: 333 LIDDEVIIPNKVMKEMIEDSSKLLAKRRNVPHTDCPERRTKRFANPFRSFLEPLIQYGSS 392
Query: 640 KLKGL 654
L+ L
Sbjct: 393 DLQSL 397