BLASTX nr result
ID: Sinomenium22_contig00008243
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00008243
(535 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006353735.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 82 7e-39
ref|XP_004243660.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 79 8e-38
ref|XP_007217399.1| hypothetical protein PRUPE_ppa025403mg [Prun... 81 4e-36
ref|XP_004492220.1| PREDICTED: probable E3 ubiquitin-protein lig... 73 2e-35
gb|EPS64187.1| hypothetical protein M569_10592, partial [Genlise... 69 2e-33
ref|XP_004146002.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 72 8e-33
ref|XP_004166250.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 72 1e-32
emb|CAN82093.1| hypothetical protein VITISV_031209 [Vitis vinifera] 84 2e-30
ref|XP_006394558.1| hypothetical protein EUTSA_v10004213mg [Eutr... 78 7e-30
ref|XP_006280458.1| hypothetical protein CARUB_v10026399mg [Caps... 73 7e-30
ref|XP_006853512.1| hypothetical protein AMTR_s00032p00220610 [A... 69 1e-29
gb|AGV54727.1| E3 ubiquitin-protein ligase HERC1-like protein [P... 71 3e-29
ref|NP_200895.2| protein RCC1/UVR8/GEF-LIKE 3 [Arabidopsis thali... 70 4e-28
ref|XP_006492906.1| PREDICTED: E3 ubiquitin-protein ligase HERC2... 61 2e-27
ref|XP_002866399.1| regulator of chromosome condensation family ... 68 2e-27
ref|XP_006429797.1| hypothetical protein CICLE_v10011722mg [Citr... 59 1e-26
ref|XP_006660975.1| PREDICTED: probable E3 ubiquitin-protein lig... 62 7e-26
ref|XP_003530841.1| PREDICTED: probable E3 ubiquitin-protein lig... 79 2e-25
ref|XP_006586205.1| PREDICTED: probable E3 ubiquitin-protein lig... 79 2e-25
ref|XP_007140745.1| hypothetical protein PHAVU_008G138200g [Phas... 70 4e-22
>ref|XP_006353735.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Solanum
tuberosum]
Length = 457
Score = 82.0 bits (201), Expect(3) = 7e-39
Identities = 45/80 (56%), Positives = 56/80 (70%), Gaps = 2/80 (2%)
Frame = +2
Query: 35 LPLMAYRLRSAPLARYFSSSSAKVPLLWHPETLGA--TTTVQILSWGRGASGQLGGGIEE 208
LP+ +R L+ SSSS+KVPLLW ++ + + TVQ+ SWGRGASGQLGGGIEE
Sbjct: 11 LPIFRWRRH---LSSSSSSSSSKVPLLWESKSTDSQQSVTVQLYSWGRGASGQLGGGIEE 67
Query: 209 IRLYPTTVASLLLPSNFRLS 268
IR+YP+ VAS L FRLS
Sbjct: 68 IRIYPSPVASFSLSPTFRLS 87
Score = 65.1 bits (157), Expect(3) = 7e-39
Identities = 35/56 (62%), Positives = 37/56 (66%), Gaps = 6/56 (10%)
Frame = +1
Query: 271 IPGRLP------PSPSDVLE*IVEANISRGLFHSPLLVDGKFWIWGKGDGGRLGSG 420
IPGRLP PS + + VE IS GLFHS LLVDG WIWGKGDGGRLG G
Sbjct: 90 IPGRLPSAPVLLPSSFNEGKVDVEIGISCGLFHSALLVDGNLWIWGKGDGGRLGFG 145
Score = 60.1 bits (144), Expect(3) = 7e-39
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +3
Query: 417 GHENPVFVPSLNPNLDRVSSIALGSTHSVALTSAGNVFT 533
GHENPVFVP+LN +LD V S+ALG HSVAL S G VFT
Sbjct: 145 GHENPVFVPTLNTHLDSVRSVALGGLHSVALNSLGQVFT 183
>ref|XP_004243660.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Solanum
lycopersicum]
Length = 479
Score = 79.0 bits (193), Expect(3) = 8e-38
Identities = 46/80 (57%), Positives = 55/80 (68%), Gaps = 7/80 (8%)
Frame = +2
Query: 50 YRLRSA-PLARY----FSSSSAKVPLLWHPETLGA--TTTVQILSWGRGASGQLGGGIEE 208
YR R A P+ R+ SSSS+KV LLW ++ + TVQ+ SWGRGASGQLGGGIEE
Sbjct: 5 YRTRRALPIFRWRRHLSSSSSSKVALLWESKSTDSQKAVTVQLYSWGRGASGQLGGGIEE 64
Query: 209 IRLYPTTVASLLLPSNFRLS 268
IR+YP+ VAS L FRLS
Sbjct: 65 IRIYPSPVASFSLSPTFRLS 84
Score = 64.7 bits (156), Expect(3) = 8e-38
Identities = 34/56 (60%), Positives = 36/56 (64%), Gaps = 6/56 (10%)
Frame = +1
Query: 271 IPGRLPPSPSDVLE*I------VEANISRGLFHSPLLVDGKFWIWGKGDGGRLGSG 420
IPGRLP +P + VE IS GLFHS LLVDG WIWGKGDGGRLG G
Sbjct: 87 IPGRLPSAPVLLSSSFNEGKVDVEIGISCGLFHSALLVDGNLWIWGKGDGGRLGFG 142
Score = 60.1 bits (144), Expect(3) = 8e-38
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +3
Query: 417 GHENPVFVPSLNPNLDRVSSIALGSTHSVALTSAGNVFT 533
GHENPVFVP+LN +LD V S+ALG HSVAL S G VFT
Sbjct: 142 GHENPVFVPTLNTHLDSVRSVALGGLHSVALNSLGQVFT 180
>ref|XP_007217399.1| hypothetical protein PRUPE_ppa025403mg [Prunus persica]
gi|462413549|gb|EMJ18598.1| hypothetical protein
PRUPE_ppa025403mg [Prunus persica]
Length = 494
Score = 81.3 bits (199), Expect(3) = 4e-36
Identities = 41/71 (57%), Positives = 55/71 (77%), Gaps = 7/71 (9%)
Frame = +2
Query: 83 FSSSSAKVPLLWHPETLGA------TTTVQILSWGRGASGQLGGGIEEIRLYPTTVASLL 244
FS++++K+P L+ P TTT+Q+LSWGRGASGQLGGGIEE+RLYPT VA+L+
Sbjct: 24 FSTTTSKLPTLYEPAAAATQNDDVPTTTLQLLSWGRGASGQLGGGIEELRLYPTPVANLV 83
Query: 245 LP-SNFRLSPS 274
+P S+F LSP+
Sbjct: 84 VPASSFTLSPT 94
Score = 60.5 bits (145), Expect(3) = 4e-36
Identities = 27/35 (77%), Positives = 28/35 (80%)
Frame = +1
Query: 316 IVEANISRGLFHSPLLVDGKFWIWGKGDGGRLGSG 420
+VE IS GLFHS LLVD K WIWGKGDGGRLG G
Sbjct: 114 VVEVGISCGLFHSSLLVDEKLWIWGKGDGGRLGFG 148
Score = 56.2 bits (134), Expect(3) = 4e-36
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +3
Query: 417 GHENPVFVPSLNPNLDRVSSIALGSTHSVALTSAGNVFT 533
GHEN +F+P+LNP+LD V +ALG HSVALTS G V+T
Sbjct: 148 GHENSLFLPTLNPHLDSVRFVALGGLHSVALTSLGQVYT 186
>ref|XP_004492220.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Cicer
arietinum]
Length = 435
Score = 73.2 bits (178), Expect(3) = 2e-35
Identities = 43/82 (52%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Frame = +2
Query: 35 LPLMAYRLRSAPLARYFSSSSAKVPLLWHPETLGATTTVQILSWGRGASGQLGGGIEEIR 214
L + +RLRS Y+SS+ P L+ +T +TT +Q+LSWG+GASGQLGGG+EEIR
Sbjct: 8 LASLTHRLRSY----YYSST----PPLYTTDTPDSTT-IQLLSWGKGASGQLGGGVEEIR 58
Query: 215 LYPTTVASLLLP-SNFRLSPSP 277
LYP+ V +L+LP S+F LS +P
Sbjct: 59 LYPSPVTNLILPKSSFTLSKTP 80
Score = 63.5 bits (153), Expect(3) = 2e-35
Identities = 29/40 (72%), Positives = 34/40 (85%)
Frame = +3
Query: 414 VGHENPVFVPSLNPNLDRVSSIALGSTHSVALTSAGNVFT 533
+GHEN +FVP+LNP+LD V S+ALG HSVALTSAG VFT
Sbjct: 125 LGHENSLFVPTLNPHLDNVRSVALGGLHSVALTSAGEVFT 164
Score = 58.5 bits (140), Expect(3) = 2e-35
Identities = 25/35 (71%), Positives = 28/35 (80%)
Frame = +1
Query: 316 IVEANISRGLFHSPLLVDGKFWIWGKGDGGRLGSG 420
+VE IS GLFHS L+VDG W+WGKGDGGRLG G
Sbjct: 92 VVELGISCGLFHSCLVVDGALWVWGKGDGGRLGLG 126
>gb|EPS64187.1| hypothetical protein M569_10592, partial [Genlisea aurea]
Length = 441
Score = 68.9 bits (167), Expect(3) = 2e-33
Identities = 36/72 (50%), Positives = 47/72 (65%), Gaps = 6/72 (8%)
Frame = +2
Query: 104 VPLLWHPETLGA------TTTVQILSWGRGASGQLGGGIEEIRLYPTTVASLLLPSNFRL 265
VPLL+ T A ++ +Q+ SWG GASGQLGGGIEE+R+YP +A+LL+PS F L
Sbjct: 12 VPLLYDCTTESAVPAAEDSSMLQLYSWGHGASGQLGGGIEEVRIYPAPIANLLVPSGFSL 71
Query: 266 SPSPAGCRRHPP 301
S + G PP
Sbjct: 72 SHATPGRLPPPP 83
Score = 66.2 bits (160), Expect(3) = 2e-33
Identities = 33/51 (64%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Frame = +1
Query: 274 PGRLPPSPSDVL--E*IVEANISRGLFHSPLLVDGKFWIWGKGDGGRLGSG 420
PGRLPP P D + E IS GLFHS LLVDG W+WGKGDGGRLG G
Sbjct: 76 PGRLPPPPPDPTPGDRRFEVGISCGLFHSGLLVDGGLWMWGKGDGGRLGLG 126
Score = 53.9 bits (128), Expect(3) = 2e-33
Identities = 27/41 (65%), Positives = 32/41 (78%), Gaps = 1/41 (2%)
Frame = +3
Query: 414 VGHENPVFVPSLNPNLD-RVSSIALGSTHSVALTSAGNVFT 533
+GHENPVFVP+LN NLD + SIALG HSVAL + G VF+
Sbjct: 125 LGHENPVFVPTLNSNLDTNLRSIALGGLHSVALDAFGRVFS 165
>ref|XP_004146002.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
Length = 463
Score = 72.4 bits (176), Expect(3) = 8e-33
Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 17/87 (19%)
Frame = +2
Query: 68 PLARYFSS---------SSAKVPLLW--------HPETLGATTTVQILSWGRGASGQLGG 196
P +R+FSS +S+K P L+ H G T +Q+LSWGRG+SGQLGG
Sbjct: 15 PRSRHFSSLIESPPSPSASSKFPFLYNHDSPEETHSNNAGTTAILQLLSWGRGSSGQLGG 74
Query: 197 GIEEIRLYPTTVASLLLPSNFRLSPSP 277
GIEEIRLYP+ VA+L +P+ L+ +P
Sbjct: 75 GIEEIRLYPSPVANLSVPNIHNLALAP 101
Score = 58.9 bits (141), Expect(3) = 8e-33
Identities = 31/53 (58%), Positives = 34/53 (64%), Gaps = 4/53 (7%)
Frame = +1
Query: 274 PGRLPPSPSDVLE*----IVEANISRGLFHSPLLVDGKFWIWGKGDGGRLGSG 420
PG+LP D + E IS GLFHS LLV+GK WIWGKGDGGRLG G
Sbjct: 101 PGQLPSFSGDNQDSGDDGSFELGISCGLFHSSLLVNGKVWIWGKGDGGRLGFG 153
Score = 55.5 bits (132), Expect(3) = 8e-33
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = +3
Query: 417 GHENPVFVPSLNPNLDRVSSIALGSTHSVALTSAGNVFT 533
GHENPVFVP+LN L+ V IALG HSVAL + G VFT
Sbjct: 153 GHENPVFVPTLNSRLESVRCIALGGLHSVALNALGQVFT 191
>ref|XP_004166250.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
Length = 463
Score = 71.6 bits (174), Expect(3) = 1e-32
Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 17/87 (19%)
Frame = +2
Query: 68 PLARYFSS---------SSAKVPLLW--------HPETLGATTTVQILSWGRGASGQLGG 196
P +R+FSS +S+KVP L+ H G +Q+LSWGRG+SGQLGG
Sbjct: 15 PRSRHFSSLIESPPSPSASSKVPFLYNHDSPEETHSNNAGTIAILQLLSWGRGSSGQLGG 74
Query: 197 GIEEIRLYPTTVASLLLPSNFRLSPSP 277
GIEEIRLYP+ VA+L +P+ L+ +P
Sbjct: 75 GIEEIRLYPSPVANLSVPNIHTLALAP 101
Score = 58.9 bits (141), Expect(3) = 1e-32
Identities = 31/53 (58%), Positives = 34/53 (64%), Gaps = 4/53 (7%)
Frame = +1
Query: 274 PGRLPPSPSDVLE*----IVEANISRGLFHSPLLVDGKFWIWGKGDGGRLGSG 420
PG+LP D + E IS GLFHS LLV+GK WIWGKGDGGRLG G
Sbjct: 101 PGQLPSFSGDNQDSGDDGSFELGISCGLFHSSLLVNGKVWIWGKGDGGRLGFG 153
Score = 55.5 bits (132), Expect(3) = 1e-32
Identities = 26/39 (66%), Positives = 29/39 (74%)
Frame = +3
Query: 417 GHENPVFVPSLNPNLDRVSSIALGSTHSVALTSAGNVFT 533
GHENPVFVP+LN L+ V IALG HSVAL + G VFT
Sbjct: 153 GHENPVFVPTLNSRLESVRCIALGGLHSVALNALGQVFT 191
>emb|CAN82093.1| hypothetical protein VITISV_031209 [Vitis vinifera]
Length = 363
Score = 84.3 bits (207), Expect(3) = 2e-30
Identities = 42/63 (66%), Positives = 48/63 (76%)
Frame = +2
Query: 89 SSSAKVPLLWHPETLGATTTVQILSWGRGASGQLGGGIEEIRLYPTTVASLLLPSNFRLS 268
S+S PLLW E A TTVQ+LSWGRGASGQLGGGIEE+RLYP+ VA+L LP +F L
Sbjct: 16 STSVSAPLLWKAEN-DAVTTVQLLSWGRGASGQLGGGIEEMRLYPSPVATLHLPPSFNLC 74
Query: 269 PSP 277
P P
Sbjct: 75 PIP 77
Score = 58.2 bits (139), Expect(3) = 2e-30
Identities = 26/39 (66%), Positives = 30/39 (76%)
Frame = +3
Query: 417 GHENPVFVPSLNPNLDRVSSIALGSTHSVALTSAGNVFT 533
GHE P F+P+LNPNLD + S ALG HSVAL+S G VFT
Sbjct: 108 GHEYPAFLPTLNPNLDSIRSTALGGVHSVALSSLGQVFT 146
Score = 35.8 bits (81), Expect(3) = 2e-30
Identities = 13/16 (81%), Positives = 14/16 (87%)
Frame = +1
Query: 373 KFWIWGKGDGGRLGSG 420
+ WIWGKGDGGRLG G
Sbjct: 93 ELWIWGKGDGGRLGFG 108
>ref|XP_006394558.1| hypothetical protein EUTSA_v10004213mg [Eutrema salsugineum]
gi|557091197|gb|ESQ31844.1| hypothetical protein
EUTSA_v10004213mg [Eutrema salsugineum]
Length = 448
Score = 78.2 bits (191), Expect(3) = 7e-30
Identities = 47/97 (48%), Positives = 64/97 (65%), Gaps = 11/97 (11%)
Frame = +2
Query: 44 MAYRLRSAPLARYFSSS--------SAKVPLLW-HPETLGATTTVQILSWGRGASGQLGG 196
+++R+RS R FSS+ + K+P L+ PE +TT+Q+LSWGRGASGQLGG
Sbjct: 4 LSHRIRS--FTRRFSSTRNTQRSGGATKIPTLYGSPEIESNSTTLQLLSWGRGASGQLGG 61
Query: 197 GIEEIRLYPTTVASLLLPS--NFRLSPSPAGCRRHPP 301
GIEEIR+YP+ VA+LLL S +F L+ +P PP
Sbjct: 62 GIEEIRMYPSPVANLLLRSDQSFSLAQTPGRIDADPP 98
Score = 53.9 bits (128), Expect(3) = 7e-30
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +1
Query: 331 ISRGLFHSPLLVDGKFWIWGKGDGGRLGSG 420
IS GLFHS L +DG WIWGKGDGGRLG G
Sbjct: 108 ISCGLFHSGLTIDGDLWIWGKGDGGRLGFG 137
Score = 44.7 bits (104), Expect(3) = 7e-30
Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Frame = +3
Query: 417 GHENPVFVPSLNPNLDR--VSSIALGSTHSVALTSAGNVFT 533
G EN VFVP+LNP + + +ALG HS+ALT G+VFT
Sbjct: 137 GQENSVFVPNLNPLFEEHSIRCVALGGLHSLALTHKGDVFT 177
>ref|XP_006280458.1| hypothetical protein CARUB_v10026399mg [Capsella rubella]
gi|482549162|gb|EOA13356.1| hypothetical protein
CARUB_v10026399mg [Capsella rubella]
Length = 446
Score = 73.2 bits (178), Expect(3) = 7e-30
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 13/91 (14%)
Frame = +2
Query: 44 MAYRLRSAPLARYFSSS----------SAKVPLLW-HPETLGATTTVQILSWGRGASGQL 190
+++RLRS R FSS+ ++KVP L+ PE + T+Q+LSWGRGASGQL
Sbjct: 4 LSHRLRS--FTRRFSSTRTTQRSGGGTTSKVPTLYTSPEIDSSPVTLQLLSWGRGASGQL 61
Query: 191 GGGIEEIRLYPTTVASLLLPS--NFRLSPSP 277
GGGIEEIR+YP+ VA+L+L S +F L+ +P
Sbjct: 62 GGGIEEIRMYPSPVANLVLRSDQSFSLAQAP 92
Score = 55.5 bits (132), Expect(3) = 7e-30
Identities = 27/49 (55%), Positives = 29/49 (59%)
Frame = +1
Query: 274 PGRLPPSPSDVLE*IVEANISRGLFHSPLLVDGKFWIWGKGDGGRLGSG 420
PGR+ S IS GLFHS L +DG WIWGKGDGGRLG G
Sbjct: 92 PGRIDADSSSSFR----VGISCGLFHSGLTIDGDLWIWGKGDGGRLGFG 136
Score = 48.1 bits (113), Expect(3) = 7e-30
Identities = 25/41 (60%), Positives = 29/41 (70%), Gaps = 2/41 (4%)
Frame = +3
Query: 417 GHENPVFVPSLNPNLDR--VSSIALGSTHSVALTSAGNVFT 533
G EN VFVP+LNP + + SIALG HSVALT G+VFT
Sbjct: 136 GQENSVFVPNLNPLFEERSIRSIALGGLHSVALTHQGDVFT 176
>ref|XP_006853512.1| hypothetical protein AMTR_s00032p00220610 [Amborella trichopoda]
gi|548857165|gb|ERN14979.1| hypothetical protein
AMTR_s00032p00220610 [Amborella trichopoda]
Length = 444
Score = 69.3 bits (168), Expect(3) = 1e-29
Identities = 38/75 (50%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Frame = +2
Query: 53 RLRSAPLAR-YFSSSSAKVPL-LWHPETLGATTTVQILSWGRGASGQLGGGIEEIRLYPT 226
RL PL R YFSS+++ + L + P + ++ SWGRG++GQLGGGIEEIR YPT
Sbjct: 11 RLAFQPLGRAYFSSTASPLRLTIGDPAVTTSGVRAELHSWGRGSAGQLGGGIEEIRYYPT 70
Query: 227 TVASLLLPSNFRLSP 271
VA L LP++F L+P
Sbjct: 71 PVAFLNLPTDFSLAP 85
Score = 62.4 bits (150), Expect(3) = 1e-29
Identities = 26/36 (72%), Positives = 31/36 (86%)
Frame = +1
Query: 316 IVEANISRGLFHSPLLVDGKFWIWGKGDGGRLGSGT 423
+VEA +S GLFHS LLV+GK W+WGKGDGGRLG G+
Sbjct: 98 LVEAGVSCGLFHSGLLVEGKLWVWGKGDGGRLGLGS 133
Score = 44.3 bits (103), Expect(3) = 1e-29
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +3
Query: 414 VGHENPVFVPSLNPNLDRVSSIALGSTHSVALTSAGNVFT 533
+G E +VP LNP+L+ + +ALG HS ALT G VFT
Sbjct: 131 LGSEMSAYVPMLNPHLESLRMVALGGLHSTALTMEGRVFT 170
>gb|AGV54727.1| E3 ubiquitin-protein ligase HERC1-like protein [Phaseolus vulgaris]
Length = 447
Score = 71.2 bits (173), Expect(3) = 3e-29
Identities = 44/85 (51%), Positives = 58/85 (68%), Gaps = 7/85 (8%)
Frame = +2
Query: 65 APLARYFSSSSA-----KVPLLWHPETLGATT-TVQILSWGRGASGQLGGGIEEIRLYPT 226
A L R SSA ++PLL+ +T T T+Q+LSWGRGASGQLGGG+EE RLYP+
Sbjct: 14 ATLTRRLRHSSAAAATPRLPLLYTADTTADNTVTLQVLSWGRGASGQLGGGVEETRLYPS 73
Query: 227 TVASLLLP-SNFRLSPSPAGCRRHP 298
VA+L +P S+F L+ + +G RR P
Sbjct: 74 PVANLAVPKSSFSLAQT-SGRRRLP 97
Score = 53.9 bits (128), Expect(3) = 3e-29
Identities = 22/33 (66%), Positives = 25/33 (75%)
Frame = +1
Query: 322 EANISRGLFHSPLLVDGKFWIWGKGDGGRLGSG 420
+ +S GLFHS L+ DG WIWGKGDGGRLG G
Sbjct: 106 DVGLSCGLFHSSLVADGALWIWGKGDGGRLGFG 138
Score = 49.7 bits (117), Expect(3) = 3e-29
Identities = 22/35 (62%), Positives = 28/35 (80%)
Frame = +3
Query: 417 GHENPVFVPSLNPNLDRVSSIALGSTHSVALTSAG 521
GHEN +FVP+LNP+LD + ++ALG SVALTS G
Sbjct: 138 GHENSLFVPTLNPHLDNLRTLALGGVDSVALTSLG 172
>ref|NP_200895.2| protein RCC1/UVR8/GEF-LIKE 3 [Arabidopsis thaliana]
gi|10176914|dbj|BAB10107.1| unnamed protein product
[Arabidopsis thaliana] gi|332010005|gb|AED97388.1|
regulator of chromosome condensation repeat protein-like
protein RUG3 [Arabidopsis thaliana]
Length = 445
Score = 69.7 bits (169), Expect(3) = 4e-28
Identities = 43/91 (47%), Positives = 59/91 (64%), Gaps = 13/91 (14%)
Frame = +2
Query: 44 MAYRLRSAPLARYFSSS----------SAKVPLLW-HPETLGATTTVQILSWGRGASGQL 190
+++RLRS R FSS+ + KVP+L+ P+ T+Q+ SWGRGASGQL
Sbjct: 4 LSHRLRS--FTRRFSSTRTTQRSGGGANTKVPILYTSPDIDSDPVTLQLFSWGRGASGQL 61
Query: 191 GGGIEEIRLYPTTVASLLLPS--NFRLSPSP 277
GGGIEEIR+YP+ VA+LL S +F L+ +P
Sbjct: 62 GGGIEEIRMYPSPVANLLFRSDQSFSLAQTP 92
Score = 55.1 bits (131), Expect(3) = 4e-28
Identities = 27/49 (55%), Positives = 29/49 (59%)
Frame = +1
Query: 274 PGRLPPSPSDVLE*IVEANISRGLFHSPLLVDGKFWIWGKGDGGRLGSG 420
PGR+ S IS GLFHS L +DG WIWGKGDGGRLG G
Sbjct: 92 PGRIDADSSSF-----RIGISCGLFHSGLTIDGDLWIWGKGDGGRLGFG 135
Score = 46.2 bits (108), Expect(3) = 4e-28
Identities = 24/41 (58%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Frame = +3
Query: 417 GHENPVFVPSLNPNLDR--VSSIALGSTHSVALTSAGNVFT 533
G EN VFVP+LNP + + IALG HSVALT G+VFT
Sbjct: 135 GQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFT 175
>ref|XP_006492906.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform X1
[Citrus sinensis]
Length = 446
Score = 60.8 bits (146), Expect(3) = 2e-27
Identities = 43/102 (42%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Frame = +2
Query: 44 MAYRLRSAPLARYFSSSSA---KVPLLW-HPETLGAT------TTVQILSWGRGASGQLG 193
M R R L R SSSS KVP L+ +PE T+Q+LSWGRGASGQLG
Sbjct: 1 MLLRQRLTTLTRSVSSSSPTRYKVPTLYKNPEIDNPNEDRKNAVTLQVLSWGRGASGQLG 60
Query: 194 GGIEEIRLYPTTVASLLLPSNFRLSPSPAGCRRHPPTYWNRS 319
G EE LYP VA+L+L + L+ +P WN++
Sbjct: 61 VGTEESGLYPGPVANLILSEPYFLAQTPGKLVSDCNHDWNKN 102
Score = 57.4 bits (137), Expect(3) = 2e-27
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +1
Query: 319 VEANISRGLFHSPLLVDGKFWIWGKGDGGRLGSG 420
V+ IS GLFHS L+V+GK WIWGKGDGGRLG G
Sbjct: 105 VDIGISCGLFHSGLVVNGKLWIWGKGDGGRLGFG 138
Score = 50.4 bits (119), Expect(3) = 2e-27
Identities = 26/40 (65%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +3
Query: 417 GHENPVFVPSLNPNLDR-VSSIALGSTHSVALTSAGNVFT 533
GHE+ FVP+LNP LD V IALG HSVALTS G +FT
Sbjct: 138 GHEDAAFVPTLNPYLDDPVRGIALGGVHSVALTSLGQLFT 177
>ref|XP_002866399.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata] gi|297312234|gb|EFH42658.1|
regulator of chromosome condensation family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 445
Score = 67.8 bits (164), Expect(3) = 2e-27
Identities = 37/70 (52%), Positives = 49/70 (70%), Gaps = 3/70 (4%)
Frame = +2
Query: 77 RYFSSSSAKVPLLW-HPETLGATTTVQILSWGRGASGQLGGGIEEIRLYPTTVASLLLPS 253
R ++ KVP L+ P+ T+Q+ SWGRGASGQLGGGIEEIR+YP+ VA+LLL S
Sbjct: 23 RSSGGATTKVPTLYTSPDIDSDPITLQLFSWGRGASGQLGGGIEEIRMYPSPVANLLLRS 82
Query: 254 --NFRLSPSP 277
+F L+ +P
Sbjct: 83 DQSFSLAQTP 92
Score = 54.7 bits (130), Expect(3) = 2e-27
Identities = 27/49 (55%), Positives = 29/49 (59%)
Frame = +1
Query: 274 PGRLPPSPSDVLE*IVEANISRGLFHSPLLVDGKFWIWGKGDGGRLGSG 420
PGR+ S IS GLFHS L +DG WIWGKGDGGRLG G
Sbjct: 92 PGRIDAESSSF-----PIGISCGLFHSGLTIDGDLWIWGKGDGGRLGFG 135
Score = 46.2 bits (108), Expect(3) = 2e-27
Identities = 24/41 (58%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Frame = +3
Query: 417 GHENPVFVPSLNPNLDR--VSSIALGSTHSVALTSAGNVFT 533
G EN VFVP+LNP + + IALG HSVALT G+VFT
Sbjct: 135 GQENSVFVPNLNPLFEEHSIRCIALGGLHSVALTHQGDVFT 175
>ref|XP_006429797.1| hypothetical protein CICLE_v10011722mg [Citrus clementina]
gi|557531854|gb|ESR43037.1| hypothetical protein
CICLE_v10011722mg [Citrus clementina]
Length = 446
Score = 58.5 bits (140), Expect(3) = 1e-26
Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 10/88 (11%)
Frame = +2
Query: 44 MAYRLRSAPLARYFSSSSA---KVPLLW-HPETLGAT------TTVQILSWGRGASGQLG 193
M R R L R SSSS K P L+ +PE T+Q+LSWGRGASGQLG
Sbjct: 1 MLLRQRLTTLTRSVSSSSPTRYKAPTLYKNPEIDNPNEDRKNAVTLQVLSWGRGASGQLG 60
Query: 194 GGIEEIRLYPTTVASLLLPSNFRLSPSP 277
G EE LYP VA+L+L + L+ +P
Sbjct: 61 VGTEESGLYPGPVANLILSEPYFLAQTP 88
Score = 57.4 bits (137), Expect(3) = 1e-26
Identities = 25/34 (73%), Positives = 28/34 (82%)
Frame = +1
Query: 319 VEANISRGLFHSPLLVDGKFWIWGKGDGGRLGSG 420
V+ IS GLFHS L+V+GK WIWGKGDGGRLG G
Sbjct: 105 VDIGISCGLFHSGLVVNGKLWIWGKGDGGRLGFG 138
Score = 50.1 bits (118), Expect(3) = 1e-26
Identities = 26/40 (65%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +3
Query: 417 GHENPVFVPSLNPNLDR-VSSIALGSTHSVALTSAGNVFT 533
GHE+ FVP+LNP LD V IALG HSVALTS G +FT
Sbjct: 138 GHEDAAFVPTLNPYLDDPVRCIALGGVHSVALTSLGQLFT 177
>ref|XP_006660975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like, partial
[Oryza brachyantha]
Length = 424
Score = 61.6 bits (148), Expect(3) = 7e-26
Identities = 36/66 (54%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +1
Query: 226 HCRLPPPALQFPPLS-IPGRLPPSPSDVLE*IVEANISRGLFHSPLLVDGKFWIWGKGDG 402
H L P P LS PGRLP P VE IS GLFHS ++VDG W+WGKGDG
Sbjct: 51 HLSLADPV---PVLSQTPGRLP-DPKAATAGGVEVGISCGLFHSAVIVDGGAWVWGKGDG 106
Query: 403 GRLGSG 420
GRLG G
Sbjct: 107 GRLGLG 112
Score = 55.5 bits (132), Expect(3) = 7e-26
Identities = 31/54 (57%), Positives = 35/54 (64%)
Frame = +2
Query: 86 SSSSAKVPLLWHPETLGATTTVQILSWGRGASGQLGGGIEEIRLYPTTVASLLL 247
S++S P L+ T V ILSWGRGASGQLGGG EE RLYP+ VA L L
Sbjct: 5 SATSNATPTLY----AAGVTPVSILSWGRGASGQLGGGKEERRLYPSPVAHLSL 54
Score = 46.2 bits (108), Expect(3) = 7e-26
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +3
Query: 414 VGHENPVFVPSLNPNLDRVSSIALGSTHSVALTSAGNVFT 533
+G E+ FVP NPNL + +ALG HS ALT++G VFT
Sbjct: 111 LGDESSTFVPRHNPNLSELRVLALGGIHSAALTASGEVFT 150
>ref|XP_003530841.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
X1 [Glycine max]
Length = 444
Score = 79.3 bits (194), Expect(2) = 2e-25
Identities = 49/101 (48%), Positives = 69/101 (68%), Gaps = 5/101 (4%)
Frame = +2
Query: 35 LPLMAYRLRSAPLARYFSSSSA---KVPLLWHPETLG-ATTTVQILSWGRGASGQLGGGI 202
+PL+ +RL + SS++A K P+L+ +T AT T+Q+LSWG+GASGQLGGG+
Sbjct: 3 MPLLRHRLATLTHRLRHSSAAAATPKPPILYTADTTADATATLQVLSWGKGASGQLGGGV 62
Query: 203 EEIRLYPTTVASLLLP-SNFRLSPSPAGCRRHPPTYWNRSL 322
EE RLYP+ VA+L +P S+F LS +P G RR P+ R+L
Sbjct: 63 EETRLYPSPVANLAVPKSSFALSQTP-GRRRLLPSPPKRAL 102
Score = 62.4 bits (150), Expect(2) = 2e-25
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = +3
Query: 417 GHENPVFVPSLNPNLDRVSSIALGSTHSVALTSAGNVFT 533
GHENP+FVP+LNP+LD + S+ALG HSVALTS G VFT
Sbjct: 135 GHENPLFVPTLNPHLDNLLSVALGGLHSVALTSDGEVFT 173
Score = 61.2 bits (147), Expect = 1e-07
Identities = 34/65 (52%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +1
Query: 235 LPPPALQFPPLSIPGR---LPPSPSDVLE*IVEANISRGLFHSPLLVDGKFWIWGKGDGG 405
L P F PGR LP P LE +S GLFHS L+VDG WIWGKGDGG
Sbjct: 75 LAVPKSSFALSQTPGRRRLLPSPPKRALE----VGLSCGLFHSSLIVDGALWIWGKGDGG 130
Query: 406 RLGSG 420
RLG G
Sbjct: 131 RLGFG 135
>ref|XP_006586205.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like isoform
X2 [Glycine max]
Length = 425
Score = 79.3 bits (194), Expect(2) = 2e-25
Identities = 49/101 (48%), Positives = 69/101 (68%), Gaps = 5/101 (4%)
Frame = +2
Query: 35 LPLMAYRLRSAPLARYFSSSSA---KVPLLWHPETLG-ATTTVQILSWGRGASGQLGGGI 202
+PL+ +RL + SS++A K P+L+ +T AT T+Q+LSWG+GASGQLGGG+
Sbjct: 3 MPLLRHRLATLTHRLRHSSAAAATPKPPILYTADTTADATATLQVLSWGKGASGQLGGGV 62
Query: 203 EEIRLYPTTVASLLLP-SNFRLSPSPAGCRRHPPTYWNRSL 322
EE RLYP+ VA+L +P S+F LS +P G RR P+ R+L
Sbjct: 63 EETRLYPSPVANLAVPKSSFALSQTP-GRRRLLPSPPKRAL 102
Score = 62.4 bits (150), Expect(2) = 2e-25
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = +3
Query: 417 GHENPVFVPSLNPNLDRVSSIALGSTHSVALTSAGNVFT 533
GHENP+FVP+LNP+LD + S+ALG HSVALTS G VFT
Sbjct: 135 GHENPLFVPTLNPHLDNLLSVALGGLHSVALTSDGEVFT 173
Score = 61.2 bits (147), Expect = 1e-07
Identities = 34/65 (52%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +1
Query: 235 LPPPALQFPPLSIPGR---LPPSPSDVLE*IVEANISRGLFHSPLLVDGKFWIWGKGDGG 405
L P F PGR LP P LE +S GLFHS L+VDG WIWGKGDGG
Sbjct: 75 LAVPKSSFALSQTPGRRRLLPSPPKRALE----VGLSCGLFHSSLIVDGALWIWGKGDGG 130
Query: 406 RLGSG 420
RLG G
Sbjct: 131 RLGFG 135
>ref|XP_007140745.1| hypothetical protein PHAVU_008G138200g [Phaseolus vulgaris]
gi|561013878|gb|ESW12739.1| hypothetical protein
PHAVU_008G138200g [Phaseolus vulgaris]
Length = 442
Score = 70.1 bits (170), Expect(2) = 4e-22
Identities = 44/92 (47%), Positives = 60/92 (65%), Gaps = 7/92 (7%)
Frame = +2
Query: 86 SSSSAKVPLLWHPETLGATT-TVQILSWGRGASGQLGGGIEEIRLYPTTVASLLLP-SNF 259
SS + ++PLL+ +T T T+Q+LSWGRGASGQLGGG+EE RLYP+ VA+L +P S+F
Sbjct: 23 SSVTPRLPLLYTADTTADNTVTLQVLSWGRGASGQLGGGVEETRLYPSPVANLAVPKSSF 82
Query: 260 RLSPSP-----AGCRRHPPTYWNRSLRPTSLV 340
L+ + A RR P + L +SLV
Sbjct: 83 SLAQTSGRLPYAEKRRAPDVGLSCGLFHSSLV 114
Score = 60.5 bits (145), Expect(2) = 4e-22
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +3
Query: 417 GHENPVFVPSLNPNLDRVSSIALGSTHSVALTSAGNVFT 533
GHEN +FVP+LNP+LD + ++ALG HSVALTSAG VFT
Sbjct: 133 GHENSLFVPTLNPHLDNLRTLALGGLHSVALTSAGEVFT 171