BLASTX nr result
ID: Sinomenium22_contig00008183
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00008183
(2595 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g... 545 e-152
emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera] 535 e-149
ref|XP_006482257.1| PREDICTED: KH domain-containing protein At4g... 522 e-145
ref|XP_006430781.1| hypothetical protein CICLE_v10011187mg [Citr... 519 e-144
ref|XP_007033279.1| RNA-binding KH domain-containing protein iso... 506 e-140
ref|XP_007033276.1| RNA-binding KH domain-containing protein iso... 506 e-140
ref|XP_004304132.1| PREDICTED: KH domain-containing protein At4g... 467 e-128
ref|XP_006430782.1| hypothetical protein CICLE_v10011187mg [Citr... 460 e-126
ref|XP_007033280.1| RNA-binding KH domain-containing protein iso... 460 e-126
ref|XP_007033277.1| RNA-binding KH domain-containing protein iso... 460 e-126
ref|XP_006358053.1| PREDICTED: KH domain-containing protein At4g... 457 e-126
ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus ... 452 e-124
ref|XP_004234567.1| PREDICTED: KH domain-containing protein At4g... 447 e-122
ref|XP_006383459.1| hypothetical protein POPTR_0005s15690g [Popu... 437 e-119
ref|XP_007217649.1| hypothetical protein PRUPE_ppa027198mg, part... 434 e-118
gb|AEV43362.1| poly C-binding protein [Citrus sinensis] 399 e-108
ref|XP_006661902.1| PREDICTED: KH domain-containing protein At4g... 348 9e-93
ref|XP_007033281.1| RNA-binding KH domain-containing protein iso... 343 3e-91
gb|AAP54423.2| KH domain containing protein, expressed [Oryza sa... 335 8e-89
ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group] g... 335 8e-89
>ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera] gi|296087281|emb|CBI33655.3| unnamed protein
product [Vitis vinifera]
Length = 676
Score = 545 bits (1404), Expect = e-152
Identities = 332/675 (49%), Positives = 402/675 (59%), Gaps = 7/675 (1%)
Frame = -2
Query: 2234 KRNSGFKKSRRNNSNYEPGAGIPNGAETVYCILCPTXXXXXXXXXXXXXXKALRDETHAK 2055
KR K+ R NNS++E G A+TVY ILCP+ KALR+ET AK
Sbjct: 18 KRKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGGVIGKGGGIVKALREETQAK 77
Query: 2054 IKIDEAVPGTDERVIIIFSSSTRKPRESSXXXXXXXXXXXXXEHESMQLHCPAQHALLRV 1875
I + ++VPG+DERVIII+S+ T+ P+E + M+ HCPAQ AL++V
Sbjct: 78 ITVADSVPGSDERVIIIYSAPTKNPKEHDSNEDPEMEEE----QDHMEPHCPAQDALMKV 133
Query: 1874 HERIAEEEDLYGVSDHEDNNENNVVTARLLVPSNKVGCLLGKGGHVIQRLRSETGANIRI 1695
HERI EE DL+G ++ ED+NEN VVTARLLVP+N VGCLLGK G VIQRLRSETGANIR+
Sbjct: 134 HERIIEE-DLFGGTEFEDDNENTVVTARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 192
Query: 1694 LPPEHLPACAMSTDELVQISGASDVAKKALYEVSTLLYQNPR---PPINYXXXXXXXXXX 1524
LP EHLP CAMS+DELVQISG VAKKALYEVSTLL+QNPR PP ++
Sbjct: 193 LPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNPRKDKPPSSFPMSFGGQGFH 252
Query: 1523 XXXXXXXXXXXXXXXMWSHRNSXXXXXXXXXXXXXXGNEFPRFGPGVNSGP-AGNSGKAS 1347
MWS+RNS ++ P PG G AG+ G+AS
Sbjct: 253 PPGASMGNMPPPGNPMWSNRNSNSQGVPPMPWMGGYRSQ-PSVVPGGFDGVHAGHGGEAS 311
Query: 1346 AEFNMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDIPWN 1167
EF+MKILCPA KIG VIGKGG NVKQ+QQETGA+IHVED+ E++ERVI VS F+ WN
Sbjct: 312 GEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESEERVIRVSSFEALWN 371
Query: 1166 PRSPTIDAILQLQVHTNEISEKGIITTRLLVPSSRVGCLLGQGGHIITEMRRRCQADIRV 987
PRS TI+AILQLQ T+E S+KG +TTRLLVPSS+VGC+LGQGGH+I EMRRR QADIRV
Sbjct: 372 PRSQTIEAILQLQNKTSEYSDKGGMTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 431
Query: 986 ISKDGKPKCASAEEELVQISGNANVARNALSEIASRLRVRSLEGVSATAEXXXXXXXXXX 807
SK+ KPKCAS +EELVQISGN VA++AL+EIASRLRVR L + E
Sbjct: 432 YSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLRVRCLRDANGGVEPAPVGPVPGF 491
Query: 806 XXXXXXPDXXXXXXXXXXXXXXXXXXXXXXXXXXAREYEAPSYPVQSSGAGPAGYPNINS 627
P EYE SYPV + GY N+NS
Sbjct: 492 GHPGKLPGGLPSSSGALGAGSSGGFELSKGGGL---EYEPQSYPVPPAA---TGYHNVNS 545
Query: 626 SMEIKIPXXXXXXXXXXXXXXXXXXXXXXGAKVKLNDPQTGGSECVVEIHGSSEQMNAAQ 447
SME KIP GA+VKL DPQ+GGSECVVEI GSSE + AAQ
Sbjct: 546 SMESKIPNNSVSSVIGMGGGNVANMSEMAGARVKLQDPQSGGSECVVEIRGSSEHLTAAQ 605
Query: 446 NLLHSFIASA---TQNFTTQPPQQAHVAPAVQSYYAQQQESPYAAAQNYTAQQHQQSSYP 276
++L +F+ASA QN Q +++ Q+ Y P Q+ A Q ++YP
Sbjct: 606 SILQAFMASAGAGGQNMNPQQGSYQNMSAHPQAPYQNMNAPPQVPYQSMNAPPQQAAAYP 665
Query: 275 SAVQNYTAQQHPSPY 231
N +AQQ Y
Sbjct: 666 ----NMSAQQSSYQY 676
>emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]
Length = 668
Score = 535 bits (1377), Expect = e-149
Identities = 319/621 (51%), Positives = 382/621 (61%), Gaps = 4/621 (0%)
Frame = -2
Query: 2234 KRNSGFKKSRRNNSNYEPGAGIPNGAETVYCILCPTXXXXXXXXXXXXXXKALRDETHAK 2055
KR K+ R NNS++E G A+TVY ILCP+ KALR+ET AK
Sbjct: 46 KRKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGGVIGKGGGIVKALREETQAK 105
Query: 2054 IKIDEAVPGTDERVIIIFSSSTRKPRESSXXXXXXXXXXXXXEHESMQLHCPAQHALLRV 1875
I + ++VPG+DERVIII+S+ T+ P+E + + M+ HCPAQ AL++V
Sbjct: 106 ITVADSVPGSDERVIIIYSAPTKNPKEHNSNEDPEREEE----QDHMEPHCPAQDALMKV 161
Query: 1874 HERIAEEEDLYGVSDHEDNNENNVVTARLLVPSNKVGCLLGKGGHVIQRLRSETGANIRI 1695
HERI EE DL+G ++ ED+NEN VVTARLLVP+N VGCLLGK G VIQRLRSETGANIR+
Sbjct: 162 HERIIEE-DLFGGTEFEDDNENTVVTARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 220
Query: 1694 LPPEHLPACAMSTDELVQISGASDVAKKALYEVSTLLYQNPR---PPINYXXXXXXXXXX 1524
LP EHLP CAMS+DELVQISG VAKKALYEVSTLL+QNPR PP ++
Sbjct: 221 LPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNPRKDKPPSSFPMSFGGQGFH 280
Query: 1523 XXXXXXXXXXXXXXXMWSHRNSXXXXXXXXXXXXXXGNEFPRFGPGVNSGP-AGNSGKAS 1347
MWS+RNS ++ P PG G AG+ G+AS
Sbjct: 281 PPGASMGNMPPPGNPMWSNRNSNSQGVPPMPWMGGYRSQ-PSVVPGGFDGVHAGHGGEAS 339
Query: 1346 AEFNMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDIPWN 1167
EF+MKILCPA KIG VIGKGG NVKQ+QQETGA+IHVED+ E++ERVI VS F+ WN
Sbjct: 340 GEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESEERVIRVSSFEALWN 399
Query: 1166 PRSPTIDAILQLQVHTNEISEKGIITTRLLVPSSRVGCLLGQGGHIITEMRRRCQADIRV 987
PRS TI+AILQLQ T+E S+KG +TTRLLVPSS+VGC+LGQGGH+I EMRRR QADIRV
Sbjct: 400 PRSQTIEAILQLQNKTSEYSDKGGMTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 459
Query: 986 ISKDGKPKCASAEEELVQISGNANVARNALSEIASRLRVRSLEGVSATAEXXXXXXXXXX 807
SK+ KPKCAS +EELVQISGN VA++AL+EIASRLRVR L + E
Sbjct: 460 YSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRLRVRCLRDANGGVEPAPVGPVPGF 519
Query: 806 XXXXXXPDXXXXXXXXXXXXXXXXXXXXXXXXXXAREYEAPSYPVQSSGAGPAGYPNINS 627
P EYE SYPV + GY N+NS
Sbjct: 520 GHPGKLPGGLPSSSGALGAGSSGGFELSKGGGL---EYEPQSYPVPPAA---TGYHNVNS 573
Query: 626 SMEIKIPXXXXXXXXXXXXXXXXXXXXXXGAKVKLNDPQTGGSECVVEIHGSSEQMNAAQ 447
SME KIP GA+VKL DPQ+GGSECVVEI GSSE + AAQ
Sbjct: 574 SMESKIPNNSVSSVIGMGGGNVANMSEMAGARVKLQDPQSGGSECVVEIRGSSEHLTAAQ 633
Query: 446 NLLHSFIASATQNFTTQPPQQ 384
++L +F+ASA PQQ
Sbjct: 634 SILQAFMASAGAGGQNMNPQQ 654
>ref|XP_006482257.1| PREDICTED: KH domain-containing protein At4g18375 [Citrus sinensis]
Length = 715
Score = 522 bits (1344), Expect = e-145
Identities = 330/735 (44%), Positives = 405/735 (55%), Gaps = 7/735 (0%)
Frame = -2
Query: 2222 GFKKSRRNNSNYEPGAGIPNGAETVYCILCPTXXXXXXXXXXXXXXKALRDETHAKIKID 2043
G KK +NS+ E G A+TVY ILCP+ K+LR+ET AKI +
Sbjct: 24 GIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKGGNIVKSLREETQAKITVA 83
Query: 2042 EAVPGTDERVIIIFSSSTRKPRESSXXXXXXXXXXXXXEHESMQLHCPAQHALLRVHERI 1863
+ +PG++ERVIII+SS T+ ++ + ESM+ HC AQ ALL+VH+RI
Sbjct: 84 DTIPGSEERVIIIYSSPTKIAKKVNKDDDSAAETKK----ESMEPHCAAQDALLKVHDRI 139
Query: 1862 AEEEDLYGVSDHEDNNENNVVTARLLVPSNKVGCLLGKGGHVIQRLRSETGANIRILPPE 1683
EE DL+G +D+NEN+ VTARLLVP+N VGCLLGK G VIQRLRSETGANIR+LP +
Sbjct: 140 IEE-DLFGGMASDDDNENSTVTARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAD 198
Query: 1682 HLPACAMSTDELVQISGASDVAKKALYEVSTLLYQNPR---PPINYXXXXXXXXXXXXXX 1512
LP CAM+TDELVQISG +VAK+ALYEVSTLL+QNPR PP ++
Sbjct: 199 RLPPCAMNTDELVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPA 258
Query: 1511 XXXXXXXXXXXMWSHRNSXXXXXXXXXXXXXXGNEFPRFGPG-VNSGPAGNSGKASAEFN 1335
W RNS G++ R G G +NS P G G+ SAEF+
Sbjct: 259 PMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFS 318
Query: 1334 MKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDIPWNPRSP 1155
MKILC A KIG VIGKGG NVKQ+QQETGA+IHVED+ ++DERVI S F+ WNPRS
Sbjct: 319 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 378
Query: 1154 TIDAILQLQVHTNEISEKGIITTRLLVPSSRVGCLLGQGGHIITEMRRRCQADIRVISKD 975
TIDAILQLQ T+E SEKG ITTRLLVPSS+VGC+LGQGGH+I EMRRR QADIRV SKD
Sbjct: 379 TIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKD 438
Query: 974 GKPKCASAEEELVQISGNANVARNALSEIASRLRVRSLEGVSATAEXXXXXXXXXXXXXX 795
KPKCAS +EELVQISGN VA++AL+EIASRLR R+L + AE
Sbjct: 439 DKPKCASEDEELVQISGNFGVAKDALTEIASRLRARTLRDANVGAEPAPVGPVQLVGAAG 498
Query: 794 XXPDXXXXXXXXXXXXXXXXXXXXXXXXXXAREYEAPSYPVQSSGAGPA--GYPNINSSM 621
P +YE SYP S P+ GYPN+NS+
Sbjct: 499 GLPSRGPLPSGPVGAGISGGYEPFRGGY----DYEPQSYPPPPSAPPPSATGYPNMNSAF 554
Query: 620 EIKIPXXXXXXXXXXXXXXXXXXXXXXGAKVKLNDPQTGGSECVVEIHGSSEQMNAAQNL 441
E +IP GA+VKL DP G SEC+V+I GSSE + +A
Sbjct: 555 EARIPNKAVGSVMGTGGSNIPNVGEVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGT 614
Query: 440 LHSFIASATQNFTTQPPQQAHVAPAVQSYYAQQQESPYAAAQNYTAQQHQQSSYPSAVQN 261
SF+ S Q+ QP ++ P SY SS+ S+ QN
Sbjct: 615 YQSFMTSG-QSMKVQPSSYQNINPQQSSY-------------------QTMSSHQSSYQN 654
Query: 260 YTAQQHPSPYASAAQNYGAQKQQQSPYASAAHNFDPQQQPH-SHYAAAAAMQQNYDPQHQ 84
QQ P Y + QQSPY N +PQQ + H A + P
Sbjct: 655 MNTQQSP---------YHSVNAQQSPY----QNINPQQSSYPMHTHQGAGTNPHITP--- 698
Query: 83 QHKGHYSSATMQQNY 39
+YSS+ Q Y
Sbjct: 699 TQSSYYSSSAQQGTY 713
>ref|XP_006430781.1| hypothetical protein CICLE_v10011187mg [Citrus clementina]
gi|557532838|gb|ESR44021.1| hypothetical protein
CICLE_v10011187mg [Citrus clementina]
Length = 710
Score = 519 bits (1337), Expect = e-144
Identities = 329/733 (44%), Positives = 402/733 (54%), Gaps = 5/733 (0%)
Frame = -2
Query: 2222 GFKKSRRNNSNYEPGAGIPNGAETVYCILCPTXXXXXXXXXXXXXXKALRDETHAKIKID 2043
G KK +NS+ E G A+TVY ILCP+ K+LR+ET AKI +
Sbjct: 24 GIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKGGNIVKSLREETQAKITVA 83
Query: 2042 EAVPGTDERVIIIFSSSTRKPRESSXXXXXXXXXXXXXEHESMQLHCPAQHALLRVHERI 1863
+ +PG++ERVIII+SS T+ + + ESM+ HC AQ ALL+VH+RI
Sbjct: 84 DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKK----ESMEPHCAAQDALLKVHDRI 139
Query: 1862 AEEEDLYGVSDHEDNNENNVVTARLLVPSNKVGCLLGKGGHVIQRLRSETGANIRILPPE 1683
EE DL+G +D+NEN+ VTARLLVP+N VGCLLGK G VIQRLRSETGANIR+LP +
Sbjct: 140 IEE-DLFGGMASDDDNENSTVTARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAD 198
Query: 1682 HLPACAMSTDELVQISGASDVAKKALYEVSTLLYQNPR---PPINYXXXXXXXXXXXXXX 1512
LP CAM+TDELVQISG +VAK+ALYEVSTLL+QNPR PP ++
Sbjct: 199 RLPPCAMNTDELVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPA 258
Query: 1511 XXXXXXXXXXXMWSHRNSXXXXXXXXXXXXXXGNEFPRFGPG-VNSGPAGNSGKASAEFN 1335
W RNS G++ R G G +NS P G G+ SAEF+
Sbjct: 259 PMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFS 318
Query: 1334 MKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDIPWNPRSP 1155
MKILC A KIG VIGKGG NVKQ+QQETGA+IHVED+ ++DERVI S F+ WNPRS
Sbjct: 319 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 378
Query: 1154 TIDAILQLQVHTNEISEKGIITTRLLVPSSRVGCLLGQGGHIITEMRRRCQADIRVISKD 975
TIDAILQLQ T+E SEKG ITTRLLVPSS+VGC+LGQGGH+I EMRRR QADIRV SKD
Sbjct: 379 TIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKD 438
Query: 974 GKPKCASAEEELVQISGNANVARNALSEIASRLRVRSLEGVSATAEXXXXXXXXXXXXXX 795
KPKCAS +EELVQISGN VA++AL+EIASRLR R+L + AE
Sbjct: 439 DKPKCASEDEELVQISGNFGVAKDALTEIASRLRARTLRDANVGAEPAPVGPVQLVGAAG 498
Query: 794 XXPDXXXXXXXXXXXXXXXXXXXXXXXXXXAREYEAPSYPVQSSGAGPAGYPNINSSMEI 615
P +YE SYP S GYPN+NS+ E
Sbjct: 499 GLPSRGPLPSGPVGAGISGGYEPFRGGY----DYEPQSYPPPPSA---MGYPNMNSAFEA 551
Query: 614 KIPXXXXXXXXXXXXXXXXXXXXXXGAKVKLNDPQTGGSECVVEIHGSSEQMNAAQNLLH 435
+IP GA+VKL DP G SEC+V+I GSSE + +A
Sbjct: 552 RIPNKAVGSVMGTGGSNIPNVGEVAGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQ 611
Query: 434 SFIASATQNFTTQPPQQAHVAPAVQSYYAQQQESPYAAAQNYTAQQHQQSSYPSAVQNYT 255
SF+ S Q+ QP ++ P SY SS+ S+ QN
Sbjct: 612 SFMTSG-QSMKVQPSSYQNINPQQSSY-------------------QTMSSHQSSYQNMN 651
Query: 254 AQQHPSPYASAAQNYGAQKQQQSPYASAAHNFDPQQQPH-SHYAAAAAMQQNYDPQHQQH 78
QQ P Y + QQSPY N +PQQ + H A + P
Sbjct: 652 TQQSP---------YHSVNAQQSPY----QNINPQQSSYPMHTHQGAGTNPHITP---TQ 695
Query: 77 KGHYSSATMQQNY 39
+YSS+ Q Y
Sbjct: 696 SSYYSSSAQQGTY 708
>ref|XP_007033279.1| RNA-binding KH domain-containing protein isoform 4 [Theobroma cacao]
gi|508712308|gb|EOY04205.1| RNA-binding KH
domain-containing protein isoform 4 [Theobroma cacao]
Length = 706
Score = 506 bits (1304), Expect = e-140
Identities = 332/714 (46%), Positives = 402/714 (56%), Gaps = 15/714 (2%)
Frame = -2
Query: 2228 NSGFKKSRRNNSNYEPGAGIPNGAETVYCILCPTXXXXXXXXXXXXXXKALRDETHAKIK 2049
N+ K NS +E +G N +TVY +LCP+ KALR+ET AKI
Sbjct: 23 NNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIGGVIGKGGSIVKALREETQAKIT 82
Query: 2048 IDEAVPGTDERVIIIFSSSTRKPRESSXXXXXXXXXXXXXEHESMQLHCPAQHALLRVHE 1869
+ ++V G DERVIII+SS + ++S M+ C AQ ALL+VH+
Sbjct: 83 VGDSVLGCDERVIIIYSSPMKVKTQNSDEDSRGENKKDEVV--VMEPCCAAQDALLKVHD 140
Query: 1868 RIAEEEDLYGVSDHEDNNENNVVTARLLVPSNKVGCLLGKGGHVIQRLRSETGANIRILP 1689
+IAE+ DL+G +D+N N VVTARLLVP+N VGCLLGK G VIQRLRSETGA+IRILP
Sbjct: 141 QIAED-DLFGGMALDDDNGNTVVTARLLVPNNMVGCLLGKRGDVIQRLRSETGASIRILP 199
Query: 1688 PEHLPACAMSTDELVQISGASDVAKKALYEVSTLLYQNPR---PPINYXXXXXXXXXXXX 1518
+HLPACAM+TDELVQISG DVAK+ALYEVSTLL+QNPR PP+++
Sbjct: 200 ADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQNPRKDNPPLSFPVPHAGQNFPPP 259
Query: 1517 XXXXXXXXXXXXXMWSHRNSXXXXXXXXXXXXXXGNEFPRFGPG-VNSGPAGNSGKASAE 1341
WSHRNS GN FGPG ++S P +ASAE
Sbjct: 260 SAIPPSNPM-----WSHRNSSPHDIPSMPWMVPHGNRPSGFGPGSLSSFPPARGAEASAE 314
Query: 1340 FNMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDIPWNPR 1161
F+MKILCPA KIG VIGKGG NVKQ+QQETGA IHVED+T E+DERVI VS + WNPR
Sbjct: 315 FSMKILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVEDATIESDERVIRVSAIEGLWNPR 374
Query: 1160 SPTIDAILQLQVHTNEISEKGIITTRLLVPSSRVGCLLGQGGHIITEMRRRCQADIRVIS 981
S TIDAILQLQ T+E SEKG +TTRLLVPSS+VGC+LGQGGH+I EMRRR QADIRV S
Sbjct: 375 SQTIDAILQLQNKTSEFSEKGTVTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYS 434
Query: 980 KDGKPKCASAEEELVQISGNANVARNALSEIASRLRVRSLEGVSATAEXXXXXXXXXXXX 801
KD KPKCAS +EELVQISGN VA++AL+EIASRLRVR+L V+A AE
Sbjct: 435 KDDKPKCASEDEELVQISGNFGVAKDALAEIASRLRVRTLRDVNAGAETAPVGPVNGFGP 494
Query: 800 XXXXPDXXXXXXXXXXXXXXXXXXXXXXXXXXAREYEAPSYPVQSSGAGPAG--YPNINS 627
D REYE P + PA Y N+N
Sbjct: 495 ARSMAD---GLPPAAAIGPGRSGGYESFRGGGGREYE----PQNNYSVPPAAVRYSNMNG 547
Query: 626 SMEIKIPXXXXXXXXXXXXXXXXXXXXXXGAKVKLNDPQTGGSECVVEIHGSSEQMNAAQ 447
++E KI GA+V+L DPQTGGSE E GSSE + AAQ
Sbjct: 548 ALEAKI-LNNMSSSVTGTGGSTILNTQVSGARVRLEDPQTGGSE---EFRGSSEHLTAAQ 603
Query: 446 NLLHSFIASATQNFTTQPPQQAHVAPAVQSYY-AQQQESPYAAAQNYTAQQ--------H 294
++ SF+ S+ Q+ Q +++ SY Q SPY N AQQ H
Sbjct: 604 SIFQSFMPSSGQSMNAQQSSYQNLSVQQSSYLNMNAQRSPY---PNMNAQQSPYQNRHPH 660
Query: 293 QQSSYPSAVQNYTAQQHPSPYASAAQNYGAQKQQQSPYASAAHNFDPQQQPHSH 132
Q S Y QN + QQ P S Y Q+ Y HN+ QQ + +
Sbjct: 661 QSSPY----QNLSVQQSPYSVTSQQVAYANINAPQTAY----HNYSAQQGAYQY 706
>ref|XP_007033276.1| RNA-binding KH domain-containing protein isoform 1 [Theobroma cacao]
gi|590652914|ref|XP_007033278.1| RNA-binding KH
domain-containing protein isoform 1 [Theobroma cacao]
gi|508712305|gb|EOY04202.1| RNA-binding KH
domain-containing protein isoform 1 [Theobroma cacao]
gi|508712307|gb|EOY04204.1| RNA-binding KH
domain-containing protein isoform 1 [Theobroma cacao]
Length = 706
Score = 506 bits (1304), Expect = e-140
Identities = 332/714 (46%), Positives = 402/714 (56%), Gaps = 15/714 (2%)
Frame = -2
Query: 2228 NSGFKKSRRNNSNYEPGAGIPNGAETVYCILCPTXXXXXXXXXXXXXXKALRDETHAKIK 2049
N+ K NS +E +G N +TVY +LCP+ KALR+ET AKI
Sbjct: 23 NNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIGGVIGKGGSIVKALREETQAKIT 82
Query: 2048 IDEAVPGTDERVIIIFSSSTRKPRESSXXXXXXXXXXXXXEHESMQLHCPAQHALLRVHE 1869
+ ++V G DERVIII+SS + ++S M+ C AQ ALL+VH+
Sbjct: 83 VGDSVLGCDERVIIIYSSPMKVKTQNSDEDSRGENKKDEVV--VMEPCCAAQDALLKVHD 140
Query: 1868 RIAEEEDLYGVSDHEDNNENNVVTARLLVPSNKVGCLLGKGGHVIQRLRSETGANIRILP 1689
+IAE+ DL+G +D+N N VVTARLLVP+N VGCLLGK G VIQRLRSETGA+IRILP
Sbjct: 141 QIAED-DLFGGMALDDDNGNTVVTARLLVPNNMVGCLLGKRGDVIQRLRSETGASIRILP 199
Query: 1688 PEHLPACAMSTDELVQISGASDVAKKALYEVSTLLYQNPR---PPINYXXXXXXXXXXXX 1518
+HLPACAM+TDELVQISG DVAK+ALYEVSTLL+QNPR PP+++
Sbjct: 200 ADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQNPRKDNPPLSFPVPHAGQNFPPP 259
Query: 1517 XXXXXXXXXXXXXMWSHRNSXXXXXXXXXXXXXXGNEFPRFGPG-VNSGPAGNSGKASAE 1341
WSHRNS GN FGPG ++S P +ASAE
Sbjct: 260 SAIPPSNPM-----WSHRNSSPHDIPSMPWMVPHGNRPSGFGPGSLSSFPPARGAEASAE 314
Query: 1340 FNMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDIPWNPR 1161
F+MKILCPA KIG VIGKGG NVKQ+QQETGA IHVED+T E+DERVI VS + WNPR
Sbjct: 315 FSMKILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVEDATIESDERVIRVSAIEGLWNPR 374
Query: 1160 SPTIDAILQLQVHTNEISEKGIITTRLLVPSSRVGCLLGQGGHIITEMRRRCQADIRVIS 981
S TIDAILQLQ T+E SEKG +TTRLLVPSS+VGC+LGQGGH+I EMRRR QADIRV S
Sbjct: 375 SQTIDAILQLQNKTSEFSEKGTVTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYS 434
Query: 980 KDGKPKCASAEEELVQISGNANVARNALSEIASRLRVRSLEGVSATAEXXXXXXXXXXXX 801
KD KPKCAS +EELVQISGN VA++AL+EIASRLRVR+L V+A AE
Sbjct: 435 KDDKPKCASEDEELVQISGNFGVAKDALAEIASRLRVRTLRDVNAGAETAPVGPVNGFGP 494
Query: 800 XXXXPDXXXXXXXXXXXXXXXXXXXXXXXXXXAREYEAPSYPVQSSGAGPAG--YPNINS 627
D REYE P + PA Y N+N
Sbjct: 495 ARSMAD---GLPPAAAIGPGRSGGYESFRGGGGREYE----PQNNYSVPPAAVRYSNMNG 547
Query: 626 SMEIKIPXXXXXXXXXXXXXXXXXXXXXXGAKVKLNDPQTGGSECVVEIHGSSEQMNAAQ 447
++E KI GA+V+L DPQTGGSE E GSSE + AAQ
Sbjct: 548 ALEAKI-LNNMSSSVTGTGGSTILNSEVSGARVRLEDPQTGGSE---EFRGSSEHLTAAQ 603
Query: 446 NLLHSFIASATQNFTTQPPQQAHVAPAVQSYY-AQQQESPYAAAQNYTAQQ--------H 294
++ SF+ S+ Q+ Q +++ SY Q SPY N AQQ H
Sbjct: 604 SIFQSFMPSSGQSMNAQQSSYQNLSVQQSSYLNMNAQRSPY---PNMNAQQSPYQNRHPH 660
Query: 293 QQSSYPSAVQNYTAQQHPSPYASAAQNYGAQKQQQSPYASAAHNFDPQQQPHSH 132
Q S Y QN + QQ P S Y Q+ Y HN+ QQ + +
Sbjct: 661 QSSPY----QNLSVQQSPYSVTSQQVAYANINAPQTAY----HNYSAQQGAYQY 706
>ref|XP_004304132.1| PREDICTED: KH domain-containing protein At4g18375-like [Fragaria
vesca subsp. vesca]
Length = 760
Score = 467 bits (1202), Expect = e-128
Identities = 314/756 (41%), Positives = 401/756 (53%), Gaps = 14/756 (1%)
Frame = -2
Query: 2234 KRNSGFKKSRRNNSNYEPGAGIPNGAETVYCILCPTXXXXXXXXXXXXXXKALRDETHAK 2055
++ S +K NNSN E +G ETVY ILCP+ K+LR+ET +K
Sbjct: 19 RKGSSNQKGNLNNSNREQSSGNAQSLETVYRILCPSKKIGGVIGKGGGIIKSLREETRSK 78
Query: 2054 IKIDEAVPGTDERVIIIFSSSTRKPRESSXXXXXXXXXXXXXEHESMQLHCPAQHALLRV 1875
I + ++VPG+DERVIIIFS T+ R+ + + ++ HC AQ ALL+V
Sbjct: 79 ITVSDSVPGSDERVIIIFSPPTKISRKQNSDEDSHKADE----QKPLEPHCAAQDALLKV 134
Query: 1874 HERIAEEEDLYGVSDHEDNNENNVVTARLLVPSNKVGCLLGKGGHVIQRLRSETGANIRI 1695
H+RI EE DLY +D+NEN VVT RLLVP+N VGCLLGK G VIQRLRSET ANIR+
Sbjct: 135 HDRIVEE-DLYDGVTFDDDNENIVVT-RLLVPNNLVGCLLGKRGDVIQRLRSETRANIRV 192
Query: 1694 LPPEHLPACAMSTDELVQISGASDVAKKALYEVSTLLYQNPR---PPINYXXXXXXXXXX 1524
LP + LP CAM TDELVQISG DVAKKALYEVSTLL+QNPR PP+
Sbjct: 193 LPADQLPTCAMDTDELVQISGKPDVAKKALYEVSTLLHQNPRKDKPPLGLAIPFGGQGFH 252
Query: 1523 XXXXXXXXXXXXXXXMWSHRNSXXXXXXXXXXXXXXGNEFPRFGPGVNSGPAGNSGKASA 1344
W +R + G + PAG+ +ASA
Sbjct: 253 LRGAPNMFPPGNPI--WPNREPSHGMPPMPWIGECENHSSGYGRGGFDGDPAGHGVEASA 310
Query: 1343 EFNMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDIPWNP 1164
EF +KILC A KIG VIGKGG NVKQ+Q+ETGANIHV+D++ +++ERVI VS F++ P
Sbjct: 311 EFFIKILCSAGKIGGVIGKGGFNVKQLQEETGANIHVQDASTDSEERVIRVSAFEVLRIP 370
Query: 1163 RSPTIDAILQLQVHTNEISEKGIITTRLLVPSSRVGCLLGQGGHIITEMRRRCQADIRVI 984
RS TI+AILQLQ +E+S+KG ITTRLLVPSS+VGC+LGQGG +I EMRRR QADIRV
Sbjct: 371 RSQTIEAILQLQNKASELSDKGTITTRLLVPSSKVGCILGQGGQVINEMRRRTQADIRVY 430
Query: 983 SKDGKPKCASAEEELVQISGNANVARNALSEIASRLRVRSLEGVSATAEXXXXXXXXXXX 804
SKD +PKCA +EELVQISGN VA++AL+EI SRLR+R+L +A E
Sbjct: 431 SKDDRPKCADEDEELVQISGNFAVAKDALAEITSRLRIRTLRDTNAGEEHAPVGPPPRFG 490
Query: 803 XXXXXPDXXXXXXXXXXXXXXXXXXXXXXXXXXAREYEAPSYPVQSSGAGPAGYPNINSS 624
EYE YPV + +GY +N +
Sbjct: 491 PPGSL--PVKGMPPPLSAVRAGSSGRYDHLKVGRHEYEPEGYPVPPAA---SGYQRVNRA 545
Query: 623 MEIKIPXXXXXXXXXXXXXXXXXXXXXXGAKVKLNDPQTGGSECVVEIHGSSEQMNAAQN 444
++ +IP +VK D Q+GG E V EI G S+Q+NAAQN
Sbjct: 546 LDSRIPNNAVGSFTGIGGSDVSHIGEVPRPRVKYQDSQSGGFEQVAEIRG-SDQLNAAQN 604
Query: 443 LLHSFIASATQNFTTQPPQQAHVAPAVQSYY--AQQQESPY---AAAQNYTAQQHQQSSY 279
+L + +AS QN + QP H A Q Y +SPY A Y Q
Sbjct: 605 ILQALMASMGQNASAQPSSH-HNANTRQGSYPNISDHQSPYHINAPRSPYRVNAPQSP-- 661
Query: 278 PSAVQNYTAQQHPSPYASAAQNYGAQ-KQQQSPYASAAHNFDPQQQPHSHYAAAAAMQ-- 108
Y SP+ AQ Q QQSPY +H Q+P+ A ++ Q
Sbjct: 662 ------YRVNAQRSPFQIKAQQIPYQTNAQQSPYHINSH-----QRPYQLNAQQSSYQFR 710
Query: 107 --QNYDPQHQQHKG-HYSSATMQQNYDPQQQHKGHY 9
Q +P +G H++ ++ Q Y +G Y
Sbjct: 711 APQGPNPNINAPQGAHHNLSSQQGAYHNLNSQQGAY 746
>ref|XP_006430782.1| hypothetical protein CICLE_v10011187mg [Citrus clementina]
gi|557532839|gb|ESR44022.1| hypothetical protein
CICLE_v10011187mg [Citrus clementina]
Length = 528
Score = 460 bits (1183), Expect = e-126
Identities = 260/466 (55%), Positives = 312/466 (66%), Gaps = 4/466 (0%)
Frame = -2
Query: 2222 GFKKSRRNNSNYEPGAGIPNGAETVYCILCPTXXXXXXXXXXXXXXKALRDETHAKIKID 2043
G KK +NS+ E G A+TVY ILCP+ K+LR+ET AKI +
Sbjct: 24 GIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKGGNIVKSLREETQAKITVA 83
Query: 2042 EAVPGTDERVIIIFSSSTRKPRESSXXXXXXXXXXXXXEHESMQLHCPAQHALLRVHERI 1863
+ +PG++ERVIII+SS T+ + + ESM+ HC AQ ALL+VH+RI
Sbjct: 84 DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKK----ESMEPHCAAQDALLKVHDRI 139
Query: 1862 AEEEDLYGVSDHEDNNENNVVTARLLVPSNKVGCLLGKGGHVIQRLRSETGANIRILPPE 1683
EE DL+G +D+NEN+ VTARLLVP+N VGCLLGK G VIQRLRSETGANIR+LP +
Sbjct: 140 IEE-DLFGGMASDDDNENSTVTARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAD 198
Query: 1682 HLPACAMSTDELVQISGASDVAKKALYEVSTLLYQNPR---PPINYXXXXXXXXXXXXXX 1512
LP CAM+TDELVQISG +VAK+ALYEVSTLL+QNPR PP ++
Sbjct: 199 RLPPCAMNTDELVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPA 258
Query: 1511 XXXXXXXXXXXMWSHRNSXXXXXXXXXXXXXXGNEFPRFGPG-VNSGPAGNSGKASAEFN 1335
W RNS G++ R G G +NS P G G+ SAEF+
Sbjct: 259 PMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFS 318
Query: 1334 MKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDIPWNPRSP 1155
MKILC A KIG VIGKGG NVKQ+QQETGA+IHVED+ ++DERVI S F+ WNPRS
Sbjct: 319 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 378
Query: 1154 TIDAILQLQVHTNEISEKGIITTRLLVPSSRVGCLLGQGGHIITEMRRRCQADIRVISKD 975
TIDAILQLQ T+E SEKG ITTRLLVPSS+VGC+LGQGGH+I EMRRR QADIRV SKD
Sbjct: 379 TIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKD 438
Query: 974 GKPKCASAEEELVQISGNANVARNALSEIASRLRVRSLEGVSATAE 837
KPKCAS +EELVQISGN VA++AL+EIASRLR R+L + AE
Sbjct: 439 DKPKCASEDEELVQISGNFGVAKDALTEIASRLRARTLRDANVGAE 484
>ref|XP_007033280.1| RNA-binding KH domain-containing protein isoform 5 [Theobroma cacao]
gi|508712309|gb|EOY04206.1| RNA-binding KH
domain-containing protein isoform 5 [Theobroma cacao]
Length = 591
Score = 460 bits (1183), Expect = e-126
Identities = 266/468 (56%), Positives = 316/468 (67%), Gaps = 4/468 (0%)
Frame = -2
Query: 2228 NSGFKKSRRNNSNYEPGAGIPNGAETVYCILCPTXXXXXXXXXXXXXXKALRDETHAKIK 2049
N+ K NS +E +G N +TVY +LCP+ KALR+ET AKI
Sbjct: 23 NNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIGGVIGKGGSIVKALREETQAKIT 82
Query: 2048 IDEAVPGTDERVIIIFSSSTRKPRESSXXXXXXXXXXXXXEHESMQLHCPAQHALLRVHE 1869
+ ++V G DERVIII+SS + ++S M+ C AQ ALL+VH+
Sbjct: 83 VGDSVLGCDERVIIIYSSPMKVKTQNSDEDSRGENKKDEVV--VMEPCCAAQDALLKVHD 140
Query: 1868 RIAEEEDLYGVSDHEDNNENNVVTARLLVPSNKVGCLLGKGGHVIQRLRSETGANIRILP 1689
+IAE+ DL+G +D+N N VVTARLLVP+N VGCLLGK G VIQRLRSETGA+IRILP
Sbjct: 141 QIAED-DLFGGMALDDDNGNTVVTARLLVPNNMVGCLLGKRGDVIQRLRSETGASIRILP 199
Query: 1688 PEHLPACAMSTDELVQISGASDVAKKALYEVSTLLYQNPR---PPINYXXXXXXXXXXXX 1518
+HLPACAM+TDELVQISG DVAK+ALYEVSTLL+QNPR PP+++
Sbjct: 200 ADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQNPRKDNPPLSFPVPHAGQNFPPP 259
Query: 1517 XXXXXXXXXXXXXMWSHRNSXXXXXXXXXXXXXXGNEFPRFGPG-VNSGPAGNSGKASAE 1341
WSHRNS GN FGPG ++S P +ASAE
Sbjct: 260 SAIPPSNPM-----WSHRNSSPHDIPSMPWMVPHGNRPSGFGPGSLSSFPPARGAEASAE 314
Query: 1340 FNMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDIPWNPR 1161
F+MKILCPA KIG VIGKGG NVKQ+QQETGA IHVED+T E+DERVI VS + WNPR
Sbjct: 315 FSMKILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVEDATIESDERVIRVSAIEGLWNPR 374
Query: 1160 SPTIDAILQLQVHTNEISEKGIITTRLLVPSSRVGCLLGQGGHIITEMRRRCQADIRVIS 981
S TIDAILQLQ T+E SEKG +TTRLLVPSS+VGC+LGQGGH+I EMRRR QADIRV S
Sbjct: 375 SQTIDAILQLQNKTSEFSEKGTVTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYS 434
Query: 980 KDGKPKCASAEEELVQISGNANVARNALSEIASRLRVRSLEGVSATAE 837
KD KPKCAS +EELVQISGN VA++AL+EIASRLRVR+L V+A AE
Sbjct: 435 KDDKPKCASEDEELVQISGNFGVAKDALAEIASRLRVRTLRDVNAGAE 482
>ref|XP_007033277.1| RNA-binding KH domain-containing protein isoform 2 [Theobroma cacao]
gi|508712306|gb|EOY04203.1| RNA-binding KH
domain-containing protein isoform 2 [Theobroma cacao]
Length = 580
Score = 460 bits (1183), Expect = e-126
Identities = 266/468 (56%), Positives = 316/468 (67%), Gaps = 4/468 (0%)
Frame = -2
Query: 2228 NSGFKKSRRNNSNYEPGAGIPNGAETVYCILCPTXXXXXXXXXXXXXXKALRDETHAKIK 2049
N+ K NS +E +G N +TVY +LCP+ KALR+ET AKI
Sbjct: 23 NNNRKPKWGTNSGHEQPSGNFNSGDTVYRVLCPSRKIGGVIGKGGSIVKALREETQAKIT 82
Query: 2048 IDEAVPGTDERVIIIFSSSTRKPRESSXXXXXXXXXXXXXEHESMQLHCPAQHALLRVHE 1869
+ ++V G DERVIII+SS + ++S M+ C AQ ALL+VH+
Sbjct: 83 VGDSVLGCDERVIIIYSSPMKVKTQNSDEDSRGENKKDEVV--VMEPCCAAQDALLKVHD 140
Query: 1868 RIAEEEDLYGVSDHEDNNENNVVTARLLVPSNKVGCLLGKGGHVIQRLRSETGANIRILP 1689
+IAE+ DL+G +D+N N VVTARLLVP+N VGCLLGK G VIQRLRSETGA+IRILP
Sbjct: 141 QIAED-DLFGGMALDDDNGNTVVTARLLVPNNMVGCLLGKRGDVIQRLRSETGASIRILP 199
Query: 1688 PEHLPACAMSTDELVQISGASDVAKKALYEVSTLLYQNPR---PPINYXXXXXXXXXXXX 1518
+HLPACAM+TDELVQISG DVAK+ALYEVSTLL+QNPR PP+++
Sbjct: 200 ADHLPACAMATDELVQISGKRDVAKRALYEVSTLLHQNPRKDNPPLSFPVPHAGQNFPPP 259
Query: 1517 XXXXXXXXXXXXXMWSHRNSXXXXXXXXXXXXXXGNEFPRFGPG-VNSGPAGNSGKASAE 1341
WSHRNS GN FGPG ++S P +ASAE
Sbjct: 260 SAIPPSNPM-----WSHRNSSPHDIPSMPWMVPHGNRPSGFGPGSLSSFPPARGAEASAE 314
Query: 1340 FNMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDIPWNPR 1161
F+MKILCPA KIG VIGKGG NVKQ+QQETGA IHVED+T E+DERVI VS + WNPR
Sbjct: 315 FSMKILCPAGKIGGVIGKGGFNVKQLQQETGAGIHVEDATIESDERVIRVSAIEGLWNPR 374
Query: 1160 SPTIDAILQLQVHTNEISEKGIITTRLLVPSSRVGCLLGQGGHIITEMRRRCQADIRVIS 981
S TIDAILQLQ T+E SEKG +TTRLLVPSS+VGC+LGQGGH+I EMRRR QADIRV S
Sbjct: 375 SQTIDAILQLQNKTSEFSEKGTVTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYS 434
Query: 980 KDGKPKCASAEEELVQISGNANVARNALSEIASRLRVRSLEGVSATAE 837
KD KPKCAS +EELVQISGN VA++AL+EIASRLRVR+L V+A AE
Sbjct: 435 KDDKPKCASEDEELVQISGNFGVAKDALAEIASRLRVRTLRDVNAGAE 482
>ref|XP_006358053.1| PREDICTED: KH domain-containing protein At4g18375-like isoform X1
[Solanum tuberosum] gi|565383832|ref|XP_006358054.1|
PREDICTED: KH domain-containing protein At4g18375-like
isoform X2 [Solanum tuberosum]
Length = 705
Score = 457 bits (1177), Expect = e-126
Identities = 294/698 (42%), Positives = 384/698 (55%), Gaps = 11/698 (1%)
Frame = -2
Query: 2243 PLDKRNSGFKKSRRNNSNYEPGAGIPNGAETVYCILCPTXXXXXXXXXXXXXXKALRDET 2064
P KR G K ++ N S++E + ++T YCILC + KALR+ET
Sbjct: 15 PQFKRKGGSKNAKLNFSSHERSSENSQSSDTTYCILCQSKKVGSVIGKGGSIIKALREET 74
Query: 2063 HAKIKIDEAVPGTDERVIIIFSSSTRKPRESSXXXXXXXXXXXXXEHESMQLHCPAQHAL 1884
AKI + ++VPG+D+R++I+ S ST+ R + + SM+ HC AQ AL
Sbjct: 75 QAKITVADSVPGSDDRIVIVSSPSTKLARRQNNDKNNDNPETKEE-NCSMEPHCAAQDAL 133
Query: 1883 LRVHERIAEEEDLYGVSDHEDNNENNVVTARLLVPSNKVGCLLGKGGHVIQRLRSETGAN 1704
L+VH RI EE DL GV + ED +E ++T RLLVP+N VGCLLG+ G VIQ+LRSETGA+
Sbjct: 134 LKVHNRIVEE-DLQGVQN-EDKSETVIIT-RLLVPNNLVGCLLGRKGDVIQKLRSETGAS 190
Query: 1703 IRILPPEHLPACAMSTDELVQISGASDVAKKALYEVSTLLYQNPR---PPINYXXXXXXX 1533
IR+L EHLPACAM+TDELVQISG + KKALYEVSTLL+QNPR P ++
Sbjct: 191 IRVLSAEHLPACAMTTDELVQISGKPALVKKALYEVSTLLHQNPRKDKPISSFPMVHGAQ 250
Query: 1532 XXXXXXXXXXXXXXXXXXMWSHRNSXXXXXXXXXXXXXXGNEFPRFGPG-VNSGPAGNSG 1356
MWS + N+ FG + GP ++G
Sbjct: 251 GFHPPGPPMENMIPPGKPMWSQSKTNLNGMSPALGVGGYRNQLTGFGRADFDYGPPPSAG 310
Query: 1355 KASAEFNMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDI 1176
+A +F MKILC A KIG VIGKGG NVKQ+QQ+TGA IHVED E+DERVI VS +
Sbjct: 311 EAPGDFTMKILCSAAKIGGVIGKGGFNVKQLQQDTGAGIHVEDVAPESDERVIRVSSLES 370
Query: 1175 PWNPRSPTIDAILQLQVHTNEISEKGIITTRLLVPSSRVGCLLGQGGHIITEMRRRCQAD 996
W+PRS TIDAILQLQ T+E S+KGI+TTRLL PS++VGC++GQGG +I EMRRR QAD
Sbjct: 371 FWDPRSRTIDAILQLQSKTSEFSDKGIVTTRLLFPSNKVGCIIGQGGQVINEMRRRTQAD 430
Query: 995 IRVISKDGKPKCASAEEELVQISGNANVARNALSEIASRLRVRSLEGVSATAEXXXXXXX 816
IRV+SKD KP+CASA+EELVQISG+ VA++AL EI+SRLR R L ++ E
Sbjct: 431 IRVLSKDDKPRCASADEELVQISGSIGVAKDALVEISSRLRERCLRDANSKVE---STPV 487
Query: 815 XXXXXXXXXPDXXXXXXXXXXXXXXXXXXXXXXXXXXAREYEAPSYPVQSSGAGPAGYPN 636
D REY+ PSYP + N
Sbjct: 488 RPLPGFVPSEDFRSGDPQRSGAMGAGSSRRYEHLKGAVREYDHPSYPDLPIA---TRFSN 544
Query: 635 INSSMEIKIPXXXXXXXXXXXXXXXXXXXXXXGAKVKLNDPQTGGSECVVEIHGSSEQMN 456
I S E+K P G + DP++ G + +I G+S+ MN
Sbjct: 545 IRSPPEMKFP---DHSYGSAKGTGGYNIDEFAGRSARFQDPRSVGPGFIDDIRGTSDHMN 601
Query: 455 AAQNLLHSFIASATQNFTT-QPPQQAHVAPAVQSYYAQQQESPYAAAQNYTAQQHQQSS- 282
A N+ H +++NF +P Q + +PA QS QQ A QNY AQQ S
Sbjct: 602 AGHNVFH----GSSENFNAGRPTFQGYGSPAGQSSNIQQG----AYHQNYAAQQSAYQSY 653
Query: 281 -----YPSAVQNYTAQQHPSPYASAAQNYGAQKQQQSP 183
YPS + Q+P+P+ + QN +Q+ QQ+P
Sbjct: 654 PAKGGYPSGSPSQLPYQNPNPHQAPYQNINSQQHQQAP 691
>ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223544094|gb|EEF45619.1| Poly(rC)-binding protein,
putative [Ricinus communis]
Length = 537
Score = 452 bits (1162), Expect = e-124
Identities = 262/469 (55%), Positives = 310/469 (66%), Gaps = 3/469 (0%)
Frame = -2
Query: 2234 KRNSGFKKSRRNNSNYEPGAGIPNGAETVYCILCPTXXXXXXXXXXXXXXKALRDETHAK 2055
KR +K + NNS E +G P +TVY ILCP+ K LR+ET AK
Sbjct: 18 KRKGVTRKGKWNNSGREESSGNPLPVDTVYRILCPSRKIGGVIGKGGGIIKGLREETQAK 77
Query: 2054 IKIDEAVPGTDERVIIIFSSSTRKPRESSXXXXXXXXXXXXXEHESMQLHCPAQHALLRV 1875
I + + VPG+DERVIII+SS P + S E + M+ +C AQ ALL+V
Sbjct: 78 ITVADPVPGSDERVIIIYSS----PEKISRNHNDHEDLTMENEQDIMEPYCAAQDALLKV 133
Query: 1874 HERIAEEEDLYGVSDHEDNNENNVVTARLLVPSNKVGCLLGKGGHVIQRLRSETGANIRI 1695
H+RI EE DL+G +D+NEN VTARLLVP+N VGCLLGK G VIQRLRSETGANIR+
Sbjct: 134 HDRIVEE-DLFGGMTSDDDNENGFVTARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 192
Query: 1694 LPPEHLPACAMSTDELVQISGASDVAKKALYEVSTLLYQNPRP--PINYXXXXXXXXXXX 1521
LP +HLP CAMSTDELVQIS DVAKKALYEVSTLL+QNPR P +
Sbjct: 193 LPADHLPTCAMSTDELVQISAKPDVAKKALYEVSTLLHQNPRKDKPPSVPMPYSGQSFHP 252
Query: 1520 XXXXXXXXXXXXXXMWSHRNSXXXXXXXXXXXXXXGNEFPRFGPG-VNSGPAGNSGKASA 1344
MW H NS ++ FGPG + P G+ + SA
Sbjct: 253 PGGPMKNLPPLGSPMWPHHNSSHSIPPMPIMGRYG-SQSSGFGPGGFDDVPRGHVAEPSA 311
Query: 1343 EFNMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDIPWNP 1164
EF+MKILC A KIG VIGKGGSNVK +QQ+TGA+IHVED++ E+DERVI VS + WNP
Sbjct: 312 EFSMKILCSAGKIGGVIGKGGSNVKVVQQDTGASIHVEDASAESDERVIRVSASEALWNP 371
Query: 1163 RSPTIDAILQLQVHTNEISEKGIITTRLLVPSSRVGCLLGQGGHIITEMRRRCQADIRVI 984
RS TIDAILQLQ T++ SEKG ITTRLLVPSS+VGC+LGQGG +I EMRRR QADIRV
Sbjct: 372 RSQTIDAILQLQNKTSDFSEKGTITTRLLVPSSKVGCILGQGGQVINEMRRRTQADIRVY 431
Query: 983 SKDGKPKCASAEEELVQISGNANVARNALSEIASRLRVRSLEGVSATAE 837
SKD KPKCAS +EELVQISG VA++AL+EIASRLRVR+L V+A AE
Sbjct: 432 SKDEKPKCASEDEELVQISGKFGVAKDALAEIASRLRVRTLRDVNAGAE 480
>ref|XP_004234567.1| PREDICTED: KH domain-containing protein At4g18375-like [Solanum
lycopersicum]
Length = 707
Score = 447 bits (1149), Expect = e-122
Identities = 294/713 (41%), Positives = 382/713 (53%), Gaps = 11/713 (1%)
Frame = -2
Query: 2243 PLDKRNSGFKKSRRNNSNYEPGAGIPNGAETVYCILCPTXXXXXXXXXXXXXXKALRDET 2064
P KR G K ++ N S++E + ++T YCILC + KALR+ET
Sbjct: 15 PQFKRKGGSKNAKLNFSSHERSSENSQSSDTTYCILCQSKKVGSVIGKGGSIIKALREET 74
Query: 2063 HAKIKIDEAVPGTDERVIIIFSSSTRKPRESSXXXXXXXXXXXXXEHESMQLHCPAQHAL 1884
AKI + ++VPG+D+R++II S ST+ R + + SM+ HC AQ AL
Sbjct: 75 QAKITVADSVPGSDDRIVIISSPSTKLARRQNNDKNNDNPETKEENY-SMEPHCAAQDAL 133
Query: 1883 LRVHERIAEEEDLYGVSDHEDNNENNVVTARLLVPSNKVGCLLGKGGHVIQRLRSETGAN 1704
L+VH RI EE DL GV + ED +E ++T RLLVP+N VGCLLG+ G VIQ+LRSETGA+
Sbjct: 134 LKVHNRIVEE-DLLGVQN-EDKSEAVIIT-RLLVPNNLVGCLLGRKGDVIQKLRSETGAS 190
Query: 1703 IRILPPEHLPACAMSTDELVQISGASDVAKKALYEVSTLLYQNPR---PPINYXXXXXXX 1533
IR+L EHLPACAM+TDELVQISG + KKALYEVSTLL+QNPR P ++
Sbjct: 191 IRVLSAEHLPACAMTTDELVQISGKPALVKKALYEVSTLLHQNPRKDKPISSFPMVHGAQ 250
Query: 1532 XXXXXXXXXXXXXXXXXXMWSHRNSXXXXXXXXXXXXXXGNEFPRFGPG-VNSGPAGNSG 1356
MWS + N+ FG + GP ++G
Sbjct: 251 GFHPPGPPMENMIPPGKPMWSQSKTNLNGMPPALGVGGYRNQLTGFGRADFDYGPPPSAG 310
Query: 1355 KASAEFNMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDI 1176
+A +F MKILC A KIG VIGKGG NVKQ+QQETGA IHVED E+DERVI VS +
Sbjct: 311 EAPGDFTMKILCSAAKIGGVIGKGGFNVKQLQQETGAGIHVEDVAPESDERVIRVSSLES 370
Query: 1175 PWNPRSPTIDAILQLQVHTNEISEKGIITTRLLVPSSRVGCLLGQGGHIITEMRRRCQAD 996
W+PRS TIDAILQLQ T+E S+KGI+TTRLL PS++VGC++GQGG +I EMRRR QAD
Sbjct: 371 FWDPRSRTIDAILQLQSKTSEFSDKGIVTTRLLFPSNKVGCIIGQGGQVINEMRRRTQAD 430
Query: 995 IRVISKDGKPKCASAEEELVQISGNANVARNALSEIASRLRVRSLEGVSATAEXXXXXXX 816
IRV+SKD KP+CASA+EELVQISG+ VA++AL EI+SRLR R L ++ E
Sbjct: 431 IRVLSKDEKPRCASADEELVQISGSIGVAKDALVEISSRLRERCLRDANSKVE---STHV 487
Query: 815 XXXXXXXXXPDXXXXXXXXXXXXXXXXXXXXXXXXXXAREYEAPSYPVQSSGAGPAGYPN 636
D RE + PSYP + N
Sbjct: 488 RPLPGFVPSEDFRSRDPQRSGVMGAGSSRRYEHLKGAVRECDHPSYPDLPIA---TRFSN 544
Query: 635 INSSMEIKIPXXXXXXXXXXXXXXXXXXXXXXGAKVKLNDPQTGGSECVVEIHGSSEQMN 456
S E+K P G+ + DP++ G V +I G+S++MN
Sbjct: 545 TRSPPEMKFP---DHSYGTAKGTGGYNIDEFAGSSARYQDPRSIGPGFVDDIRGTSDRMN 601
Query: 455 AAQNLLHSFIASATQNFTT-QPPQQAHVAPAVQSYYAQQQESPYAAAQNYTAQQHQQSS- 282
A N+ H +++N +P Q + +PA QS Q A QNY AQQ S
Sbjct: 602 AGHNVFH----GSSENLNAGRPTFQGYGSPAGQSSNIHQG----AYHQNYAAQQSAYQSY 653
Query: 281 -----YPSAVQNYTAQQHPSPYASAAQNYGAQKQQQSPYASAAHNFDPQQQPH 138
YPS + Q+P+P+ + QN +Q+ Q N Q H
Sbjct: 654 PAKGGYPSGSPSQLPYQNPNPHQAPYQNINSQQHQHQQAPPPYQNMAAQGSYH 706
>ref|XP_006383459.1| hypothetical protein POPTR_0005s15690g [Populus trichocarpa]
gi|550339070|gb|ERP61256.1| hypothetical protein
POPTR_0005s15690g [Populus trichocarpa]
Length = 563
Score = 437 bits (1123), Expect = e-119
Identities = 250/472 (52%), Positives = 305/472 (64%), Gaps = 7/472 (1%)
Frame = -2
Query: 2231 RNSGFKKSRRNNSNYEPGAGIPNGAETVYCILCPTXXXXXXXXXXXXXXKALRDETHAKI 2052
+ G SR+ + G +TVY ILCP+ KALR+ET +KI
Sbjct: 18 KRKGVSSSRKGKWSDSHGEECSGDGDTVYRILCPSRKIGGVIGKGGNIVKALREETQSKI 77
Query: 2051 KIDEAVPGTDERVIIIFSSSTRKPRESSXXXXXXXXXXXXXEHESMQLHCPAQHALLRVH 1872
+ ++V G+DERVIII+SSS + PR+ E+ + HC AQ ALL+VH
Sbjct: 78 TVADSVQGSDERVIIIYSSSDKPPRKMDGDEGLPAGNGQ---QEAFEPHCAAQDALLKVH 134
Query: 1871 ERIAEEEDLYGVSDHEDNNENNVVTARLLVPSNKVGCLLGKGGHVIQRLRSETGANIRIL 1692
+RI EE DL+G +D+N+NNVVTARLLVP+N VGC+LGK G VIQRLRSETGANIR+L
Sbjct: 135 DRIVEE-DLFGGMASDDDNDNNVVTARLLVPNNMVGCVLGKRGDVIQRLRSETGANIRVL 193
Query: 1691 PPEHLPACAMSTDELVQISGASDVAKKALYEVSTLLYQNPRP------PINYXXXXXXXX 1530
P +HLP+CAM TDELVQISG VAK+ALYE+S LL+QNPR P+ Y
Sbjct: 194 PADHLPSCAMDTDELVQISGKPAVAKRALYEISILLHQNPRKDKLPSVPMPYGGRTFHPP 253
Query: 1529 XXXXXXXXXXXXXXXXXMWSHRNSXXXXXXXXXXXXXXGNEFPRFGPG-VNSGPAGNSGK 1353
W HRNS +EF GPG N P G+ +
Sbjct: 254 SDSMANMLPPGNPM----WPHRNSTPHSMPWMGEYGNHPSEF---GPGGFNGVPPGHGRE 306
Query: 1352 ASAEFNMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDIP 1173
SAEF+MKILC KIG VIGKGGSNVK +QQETGA+IHVED++ E++ER I VS F+
Sbjct: 307 PSAEFSMKILCSTGKIGGVIGKGGSNVKIVQQETGASIHVEDASAESEERAIRVSAFEGL 366
Query: 1172 WNPRSPTIDAILQLQVHTNEISEKGIITTRLLVPSSRVGCLLGQGGHIITEMRRRCQADI 993
WNPRS TIDAILQLQ T++ SEKG+I TRLLVPSS+VGC+LGQGG +I EMRRR QADI
Sbjct: 367 WNPRSQTIDAILQLQDKTSDFSEKGMIITRLLVPSSKVGCILGQGGQVINEMRRRLQADI 426
Query: 992 RVISKDGKPKCASAEEELVQISGNANVARNALSEIASRLRVRSLEGVSATAE 837
RV K+ KPKCAS +EELVQISGN VA++AL+EIASRLR R+L +A E
Sbjct: 427 RVYPKNDKPKCASDDEELVQISGNYGVAKDALAEIASRLRARTLRDANAGTE 478
>ref|XP_007217649.1| hypothetical protein PRUPE_ppa027198mg, partial [Prunus persica]
gi|462413799|gb|EMJ18848.1| hypothetical protein
PRUPE_ppa027198mg, partial [Prunus persica]
Length = 576
Score = 434 bits (1115), Expect = e-118
Identities = 263/546 (48%), Positives = 327/546 (59%), Gaps = 5/546 (0%)
Frame = -2
Query: 2228 NSGFKKSRRNNSNYEPGAGIPNGAETVYCILCPTXXXXXXXXXXXXXXKALRDETHAKIK 2049
N+ +KK NNS E +TVY ILCP+ KALR+ET AKI
Sbjct: 23 NNNYKKGNWNNSTREQLLENYQSLDTVYRILCPSKRIGGVIGKGGGIVKALREETRAKIT 82
Query: 2048 IDEAVPGTDERVIIIFSSSTRKPRESSXXXXXXXXXXXXXEHESMQLHCPAQHALLRVHE 1869
+ ++V G+DERVIIIFSS T+ + + E M HC AQ ALL+VH
Sbjct: 83 VADSVLGSDERVIIIFSSPTKISSKQTNDGDSSEENEL----EPMDPHCAAQDALLKVHN 138
Query: 1868 RIAEEEDLYGVSDHEDNNENNVVTARLLVPSNKVGCLLGKGGHVIQRLRSETGANIRILP 1689
RI EE DL+G +D+NEN+VVTARLLVP+N VGCLLGKGG VIQRLRSET A+IR+LP
Sbjct: 139 RIVEE-DLFGGVTFDDDNENSVVTARLLVPNNMVGCLLGKGGDVIQRLRSETSASIRVLP 197
Query: 1688 PEHLPACAMSTDELVQISGASDVAKKALYEVSTLLYQNPR---PPINYXXXXXXXXXXXX 1518
+ LP CAM TDELVQISG DV K+ALYEVSTLL+QNPR PP +
Sbjct: 198 ADQLPTCAMETDELVQISGKPDVTKRALYEVSTLLHQNPRKDKPPSGFPMPFWGQGFRPP 257
Query: 1517 XXXXXXXXXXXXXMWSHR--NSXXXXXXXXXXXXXXGNEFPRFGPGVNSGPAGNSGKASA 1344
MWS+R + +EF G N P G+ G+A A
Sbjct: 258 GAPMTNVLPPGNPMWSNRAPSHSTAPMPRMEGYGNCSSEFAL--GGFNGVPPGHGGEALA 315
Query: 1343 EFNMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDIPWNP 1164
EF+MKILC KIG VIGKGG NVKQ+Q ETGA+IHV++++ +++ERVI VS F+ WNP
Sbjct: 316 EFSMKILCSPGKIGGVIGKGGFNVKQLQLETGASIHVQEASTDSEERVIHVSAFEAFWNP 375
Query: 1163 RSPTIDAILQLQVHTNEISEKGIITTRLLVPSSRVGCLLGQGGHIITEMRRRCQADIRVI 984
S TI+AIL+LQ T+E+S+KGIITTRLLVPSS+VGC+LGQGG +I EMRRR QADIRV
Sbjct: 376 ISQTIEAILELQNKTSELSDKGIITTRLLVPSSKVGCILGQGGQVINEMRRRTQADIRVY 435
Query: 983 SKDGKPKCASAEEELVQISGNANVARNALSEIASRLRVRSLEGVSATAEXXXXXXXXXXX 804
SKD +P+CA+ +EELVQISGN VA++AL+EI SRLRVR+L +A AE
Sbjct: 436 SKDDRPRCAAEDEELVQISGNFGVAKDALAEITSRLRVRTLRDANAGAEPALVGPAHGFG 495
Query: 803 XXXXXPDXXXXXXXXXXXXXXXXXXXXXXXXXXAREYEAPSYPVQSSGAGPAGYPNINSS 624
EYE SY + S+ +GYP++N +
Sbjct: 496 LAGSV--PGGGPRQPPSAVGAGSSSRYDPLKVGRHEYELQSYRIPSTA---SGYPSVNHA 550
Query: 623 MEIKIP 606
+E KIP
Sbjct: 551 LEGKIP 556
>gb|AEV43362.1| poly C-binding protein [Citrus sinensis]
Length = 569
Score = 399 bits (1026), Expect = e-108
Identities = 225/417 (53%), Positives = 274/417 (65%), Gaps = 4/417 (0%)
Frame = -2
Query: 2222 GFKKSRRNNSNYEPGAGIPNGAETVYCILCPTXXXXXXXXXXXXXXKALRDETHAKIKID 2043
G KK +NS+ E G A+TVY ILCP+ K+LR+ET AKI +
Sbjct: 24 GIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA 83
Query: 2042 EAVPGTDERVIIIFSSSTRKPRESSXXXXXXXXXXXXXEHESMQLHCPAQHALLRVHERI 1863
+ +PG++ERVIII+SS T+ + + ESM+ HC AQ ALL+VH+RI
Sbjct: 84 DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKK----ESMEPHCAAQDALLKVHDRI 139
Query: 1862 AEEEDLYGVSDHEDNNENNVVTARLLVPSNKVGCLLGKGGHVIQRLRSETGANIRILPPE 1683
EE DL+G +D+NEN+ +TARLLVP+N VGCLLGK G VIQRLRSETGANIR+LP +
Sbjct: 140 IEE-DLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAD 198
Query: 1682 HLPACAMSTDELVQISGASDVAKKALYEVSTLLYQNPR---PPINYXXXXXXXXXXXXXX 1512
LP CAM+TDE+VQISG +VAK+ALYEVSTLL+QNPR PP ++
Sbjct: 199 RLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPA 258
Query: 1511 XXXXXXXXXXXMWSHRNSXXXXXXXXXXXXXXGNEFPRFGPG-VNSGPAGNSGKASAEFN 1335
W RNS G++ R G G +NS P G G+ SAEF+
Sbjct: 259 PMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFS 318
Query: 1334 MKILCPADKIGVVIGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDIPWNPRSP 1155
MKILC A KIG VIGKGG NVKQ+QQETGA+IHVED+ ++DERVI S F+ WNPRS
Sbjct: 319 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 378
Query: 1154 TIDAILQLQVHTNEISEKGIITTRLLVPSSRVGCLLGQGGHIITEMRRRCQADIRVI 984
TIDAILQLQ T+E SEKG ITTRLLVPSS+VGC+LGQGGH+I EMRRR QADIRV+
Sbjct: 379 TIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 435
Score = 110 bits (274), Expect = 4e-21
Identities = 76/219 (34%), Positives = 113/219 (51%), Gaps = 40/219 (18%)
Frame = -2
Query: 1412 NEFPRFGP-GVNSGPAGNSGKASAEFNM-------KILCPADKIGVVIGKGGSNVKQIQQ 1257
N+F R G G+ G NS + + N +ILCP+ KIG VIGK G+ VK +++
Sbjct: 15 NQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLRE 74
Query: 1256 ETGANIHVEDSTGEADERVILVSCFDIP---------------------WNPRSPTIDAI 1140
ET A I V D+ ++ERVI++ + P P DA+
Sbjct: 75 ETQAKITVADTIPGSEERVIII--YSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDAL 132
Query: 1139 LQLQ-----------VHTNEISEKGIITTRLLVPSSRVGCLLGQGGHIITEMRRRCQADI 993
L++ + +++ +E IT RLLVP++ VGCLLG+ G +I +R A+I
Sbjct: 133 LKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANI 192
Query: 992 RVISKDGKPKCASAEEELVQISGNANVARNALSEIASRL 876
RV+ D P CA +E+VQISG NVA+ AL E+++ L
Sbjct: 193 RVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 231
Score = 64.3 bits (155), Expect = 3e-07
Identities = 45/129 (34%), Positives = 62/129 (48%), Gaps = 6/129 (4%)
Frame = -2
Query: 536 AKVKLNDPQTGGSECVVEIHGSSEQMNAAQNLLHSFIASATQNFTTQPPQQAHVAPAVQS 357
A+VKL DP G SEC+V+I GSSE + +A SF+ S Q+ QP ++ P Q
Sbjct: 437 ARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSG-QSMKVQPSSYQNINP--QQ 493
Query: 356 YYAQQQESPYAAAQNYTAQQ---HQQSSYPSAVQNYTAQQHPSP---YASAAQNYGAQKQ 195
Q S ++ QN QQ H+ ++ S QN QQ P + A N
Sbjct: 494 SSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQNINPQQSSYPMHTHQGAGTNPHITPT 553
Query: 194 QQSPYASAA 168
Q S Y+S+A
Sbjct: 554 QSSYYSSSA 562
>ref|XP_006661902.1| PREDICTED: KH domain-containing protein At4g18375-like [Oryza
brachyantha]
Length = 773
Score = 348 bits (892), Expect = 9e-93
Identities = 202/466 (43%), Positives = 284/466 (60%), Gaps = 4/466 (0%)
Frame = -2
Query: 2228 NSGFKKSRRNNSNYEPGAGIPNGAETVYCILCPTXXXXXXXXXXXXXXKALRDETHAKIK 2049
NS +K +R N+ ++ G+ ET+Y ILCP KALRDET AKI+
Sbjct: 21 NSDDRKRKRLNTKHDDGSMSSQPTETIYRILCPVKKIGSVLGRGGDVVKALRDETKAKIR 80
Query: 2048 IDEAVPGTDERVIIIFSSSTRKPRESSXXXXXXXXXXXXXEHESMQLHCPAQHALLRVHE 1869
+ +++PG DERVIIIF+ ++ + + ++M+ HC AQ ALL++H+
Sbjct: 81 VADSIPGADERVIIIFNYPSQSEDDEAAQNISTDGF------QNMKPHCFAQDALLKIHD 134
Query: 1868 RIAEEEDLYGVSDHEDNNENNVVTARLLVPSNKVGCLLGKGGHVIQRLRSETGANIRILP 1689
+IAE+EDL+G DHE + + VTAR+LVP N+VGCLLGKGG +IQ+LR+ETGA IR+LP
Sbjct: 135 KIAEDEDLHGGIDHEKSETVDGVTARILVPGNQVGCLLGKGGSIIQQLRNETGAGIRVLP 194
Query: 1688 PEHLPACAMSTDELVQISGASDVAKKALYEVSTLLYQNPR---PPINYXXXXXXXXXXXX 1518
E+LP CA+ +DELVQISGA + +KALYE+ST L+Q+PR PP+
Sbjct: 195 SENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKDNPPLE-----------EI 243
Query: 1517 XXXXXXXXXXXXXMWSHRNSXXXXXXXXXXXXXXGNEFPRFGPGVNSGPAGNSGKASAEF 1338
H N + P P +GP + EF
Sbjct: 244 IDASTQRKHQSPPQLPHANPMLPHLHVDHSP-----QIPLLDP-YRNGPLRYHAGEAEEF 297
Query: 1337 NMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVED-STGEADERVILVSCFDIPWNPR 1161
++KILC ++ IG VIGK G NV+Q++Q+TGA I V++ + ER+I+VS +IP +P
Sbjct: 298 SIKILCASEHIGQVIGKSGGNVRQVEQQTGARIQVKEVGKNASGERLIVVSSQEIPDDPV 357
Query: 1160 SPTIDAILQLQVHTNEISEKGIITTRLLVPSSRVGCLLGQGGHIITEMRRRCQADIRVIS 981
SPTI+A++ L + +E +TTRL+VPS++VGC+LG+GG +ITEMRRR A+IRV S
Sbjct: 358 SPTIEALILLHSKVSAPAENRHLTTRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYS 417
Query: 980 KDGKPKCASAEEELVQISGNANVARNALSEIASRLRVRSLEGVSAT 843
K KPK S +EELVQ++G +AR AL+EIASRLR R+L S++
Sbjct: 418 KADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTLRDGSSS 463
>ref|XP_007033281.1| RNA-binding KH domain-containing protein isoform 6, partial
[Theobroma cacao] gi|508712310|gb|EOY04207.1| RNA-binding
KH domain-containing protein isoform 6, partial
[Theobroma cacao]
Length = 530
Score = 343 bits (879), Expect = 3e-91
Identities = 233/519 (44%), Positives = 278/519 (53%), Gaps = 15/519 (2%)
Frame = -2
Query: 1643 QISGASDVAKKALYEVSTLLYQNPR---PPINYXXXXXXXXXXXXXXXXXXXXXXXXXMW 1473
+ISG DVAK+ALYEVSTLL+QNPR PP+++ W
Sbjct: 39 KISGKRDVAKRALYEVSTLLHQNPRKDNPPLSFPVPHAGQNFPPPSAIPPSNPM-----W 93
Query: 1472 SHRNSXXXXXXXXXXXXXXGNEFPRFGPG-VNSGPAGNSGKASAEFNMKILCPADKIGVV 1296
SHRNS GN FGPG ++S P +ASAEF+MKILCPA KIG V
Sbjct: 94 SHRNSSPHDIPSMPWMVPHGNRPSGFGPGSLSSFPPARGAEASAEFSMKILCPAGKIGGV 153
Query: 1295 IGKGGSNVKQIQQETGANIHVEDSTGEADERVILVSCFDIPWNPRSPTIDAILQLQVHTN 1116
IGKGG NVKQ+QQETGA IHVED+T E+DERVI VS + WNPRS TIDAILQLQ T+
Sbjct: 154 IGKGGFNVKQLQQETGAGIHVEDATIESDERVIRVSAIEGLWNPRSQTIDAILQLQNKTS 213
Query: 1115 EISEKGIITTRLLVPSSRVGCLLGQGGHIITEMRRRCQADIRVISKDGKPKCASAEEELV 936
E SEKG +TTRLLVPSS+VGC+LGQGGH+I EMRRR QADIRV SKD KPKCAS +EELV
Sbjct: 214 EFSEKGTVTTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKDDKPKCASEDEELV 273
Query: 935 QISGNANVARNALSEIASRLRVRSLEGVSATAEXXXXXXXXXXXXXXXXPDXXXXXXXXX 756
QISGN VA++AL+EIASRLRVR+L V+A AE D
Sbjct: 274 QISGNFGVAKDALAEIASRLRVRTLRDVNAGAETAPVGPVNGFGPARSMAD---GLPPAA 330
Query: 755 XXXXXXXXXXXXXXXXXAREYEAPSYPVQSSGAGPAG--YPNINSSMEIKIPXXXXXXXX 582
REYE P + PA Y N+N ++E KI
Sbjct: 331 AIGPGRSGGYESFRGGGGREYE----PQNNYSVPPAAVRYSNMNGALEAKI-LNNMSSSV 385
Query: 581 XXXXXXXXXXXXXXGAKVKLNDPQTGGSECVVEIHGSSEQMNAAQNLLHSFIASATQNFT 402
GA+V+L DPQTGGSE E GSSE + AAQ++ SF+ S+ Q+
Sbjct: 386 TGTGGSTILNSEVSGARVRLEDPQTGGSE---EFRGSSEHLTAAQSIFQSFMPSSGQSMN 442
Query: 401 TQPPQQAHVAPAVQSYY-AQQQESPYAAAQNYTAQQ--------HQQSSYPSAVQNYTAQ 249
Q +++ SY Q SPY N AQQ HQ S Y QN + Q
Sbjct: 443 AQQSSYQNLSVQQSSYLNMNAQRSPY---PNMNAQQSPYQNRHPHQSSPY----QNLSVQ 495
Query: 248 QHPSPYASAAQNYGAQKQQQSPYASAAHNFDPQQQPHSH 132
Q P S Y Q+ Y HN+ QQ + +
Sbjct: 496 QSPYSVTSQQVAYANINAPQTAY----HNYSAQQGAYQY 530
Score = 95.9 bits (237), Expect = 8e-17
Identities = 73/222 (32%), Positives = 102/222 (45%), Gaps = 1/222 (0%)
Frame = -2
Query: 2246 LPLDKRNSGFKKSRRNNSNYEPGAGIPNGAETVYCILCPTXXXXXXXXXXXXXXKALRDE 2067
+P R SGF + S++ P G AE ILCP K L+ E
Sbjct: 110 VPHGNRPSGFGPG--SLSSFPPARGAEASAEFSMKILCPAGKIGGVIGKGGFNVKQLQQE 167
Query: 2066 THAKIKIDEAVPGTDERVIIIFS-SSTRKPRESSXXXXXXXXXXXXXEHESMQLHCPAQH 1890
T A I +++A +DERVI + + PR +
Sbjct: 168 TGAGIHVEDATIESDERVIRVSAIEGLWNPRSQTID------------------------ 203
Query: 1889 ALLRVHERIAEEEDLYGVSDHEDNNENNVVTARLLVPSNKVGCLLGKGGHVIQRLRSETG 1710
A+L++ + +E +E VT RLLVPS+KVGC+LG+GGHVI +R T
Sbjct: 204 AILQLQNKTSEF------------SEKGTVTTRLLVPSSKVGCILGQGGHVINEMRRRTQ 251
Query: 1709 ANIRILPPEHLPACAMSTDELVQISGASDVAKKALYEVSTLL 1584
A+IR+ + P CA +ELVQISG VAK AL E+++ L
Sbjct: 252 ADIRVYSKDDKPKCASEDEELVQISGNFGVAKDALAEIASRL 293
>gb|AAP54423.2| KH domain containing protein, expressed [Oryza sativa Japonica Group]
Length = 677
Score = 335 bits (858), Expect = 8e-89
Identities = 198/466 (42%), Positives = 280/466 (60%), Gaps = 4/466 (0%)
Frame = -2
Query: 2228 NSGFKKSRRNNSNYEPGAGIPNGAETVYCILCPTXXXXXXXXXXXXXXKALRDETHAKIK 2049
NS K +R NS ++ G ET+Y ILCP KALRD T AKI+
Sbjct: 21 NSDDGKRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGRGGDIVKALRDTTKAKIR 80
Query: 2048 IDEAVPGTDERVIIIFSSSTRKPRESSXXXXXXXXXXXXXEHESMQLHCPAQHALLRVHE 1869
+ +++PG DERVIIIF+ S++ + E M+ HC AQ ALL++H+
Sbjct: 81 VADSIPGADERVIIIFNYSSQTEEAAQNISTDGF--------EDMKPHCFAQDALLKIHD 132
Query: 1868 RIAEEEDLYGVSDHEDNNENNVVTARLLVPSNKVGCLLGKGGHVIQRLRSETGANIRILP 1689
+IA +EDL+ HE + + V AR+LVP N+VGCLLGKGG +IQ+LR++TGA IR+LP
Sbjct: 133 KIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRVLP 192
Query: 1688 PEHLPACAMSTDELVQISGASDVAKKALYEVSTLLYQNPR---PPINYXXXXXXXXXXXX 1518
E+LP CA+ +DELVQISG+S + +KALYE+ST L+Q+PR PP+
Sbjct: 193 SENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLE-----------EI 241
Query: 1517 XXXXXXXXXXXXXMWSHRNSXXXXXXXXXXXXXXGNEFPRFGPGVNSGPAGNSGKASAEF 1338
H N + P P N +S +A EF
Sbjct: 242 IDASTQRKHQAPPQLPHANPMLPHLHVDHSP-----QIPLLDPYRNRPLQYHSAEAE-EF 295
Query: 1337 NMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVED-STGEADERVILVSCFDIPWNPR 1161
++KILC ++ IG VIGK G NV+Q++Q+TGA + V++ ++ER+I+VS +IP +P
Sbjct: 296 SIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPDDPV 355
Query: 1160 SPTIDAILQLQVHTNEISEKGIITTRLLVPSSRVGCLLGQGGHIITEMRRRCQADIRVIS 981
SPTI+A++ L + ++E +TTRL+VPS++VGC++G+GG +ITEMRRR A+IRV S
Sbjct: 356 SPTIEALILLHSKVSTLAENHHLTTRLVVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYS 415
Query: 980 KDGKPKCASAEEELVQISGNANVARNALSEIASRLRVRSLEGVSAT 843
K KPK S +EELVQ++G +AR AL+EIASRLR R+L S++
Sbjct: 416 KADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTLRDGSSS 461
>ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group] gi|22128716|gb|AAM92828.1|
putative RNA-binding protein [Oryza sativa Japonica
Group] gi|110289325|gb|ABB47821.2| KH domain containing
protein, expressed [Oryza sativa Japonica Group]
gi|113639556|dbj|BAF26861.1| Os10g0495000 [Oryza sativa
Japonica Group] gi|215694845|dbj|BAG90036.1| unnamed
protein product [Oryza sativa Japonica Group]
Length = 762
Score = 335 bits (858), Expect = 8e-89
Identities = 198/466 (42%), Positives = 280/466 (60%), Gaps = 4/466 (0%)
Frame = -2
Query: 2228 NSGFKKSRRNNSNYEPGAGIPNGAETVYCILCPTXXXXXXXXXXXXXXKALRDETHAKIK 2049
NS K +R NS ++ G ET+Y ILCP KALRD T AKI+
Sbjct: 21 NSDDGKRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGRGGDIVKALRDTTKAKIR 80
Query: 2048 IDEAVPGTDERVIIIFSSSTRKPRESSXXXXXXXXXXXXXEHESMQLHCPAQHALLRVHE 1869
+ +++PG DERVIIIF+ S++ + E M+ HC AQ ALL++H+
Sbjct: 81 VADSIPGADERVIIIFNYSSQTEEAAQNISTDGF--------EDMKPHCFAQDALLKIHD 132
Query: 1868 RIAEEEDLYGVSDHEDNNENNVVTARLLVPSNKVGCLLGKGGHVIQRLRSETGANIRILP 1689
+IA +EDL+ HE + + V AR+LVP N+VGCLLGKGG +IQ+LR++TGA IR+LP
Sbjct: 133 KIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRVLP 192
Query: 1688 PEHLPACAMSTDELVQISGASDVAKKALYEVSTLLYQNPR---PPINYXXXXXXXXXXXX 1518
E+LP CA+ +DELVQISG+S + +KALYE+ST L+Q+PR PP+
Sbjct: 193 SENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLE-----------EI 241
Query: 1517 XXXXXXXXXXXXXMWSHRNSXXXXXXXXXXXXXXGNEFPRFGPGVNSGPAGNSGKASAEF 1338
H N + P P N +S +A EF
Sbjct: 242 IDASTQRKHQAPPQLPHANPMLPHLHVDHSP-----QIPLLDPYRNRPLQYHSAEAE-EF 295
Query: 1337 NMKILCPADKIGVVIGKGGSNVKQIQQETGANIHVED-STGEADERVILVSCFDIPWNPR 1161
++KILC ++ IG VIGK G NV+Q++Q+TGA + V++ ++ER+I+VS +IP +P
Sbjct: 296 SIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPDDPV 355
Query: 1160 SPTIDAILQLQVHTNEISEKGIITTRLLVPSSRVGCLLGQGGHIITEMRRRCQADIRVIS 981
SPTI+A++ L + ++E +TTRL+VPS++VGC++G+GG +ITEMRRR A+IRV S
Sbjct: 356 SPTIEALILLHSKVSTLAENHHLTTRLVVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYS 415
Query: 980 KDGKPKCASAEEELVQISGNANVARNALSEIASRLRVRSLEGVSAT 843
K KPK S +EELVQ++G +AR AL+EIASRLR R+L S++
Sbjct: 416 KADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTLRDGSSS 461