BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00007992
         (256 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subun...    91   2e-16
ref|XP_006451217.1| hypothetical protein CICLE_v10009504mg [Citr...    91   2e-16
ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citr...    91   2e-16
ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, I...    90   3e-16
ref|XP_007013105.1| Eukaryotic rpb5 RNA polymerase subunit famil...    89   8e-16
ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit famil...    89   8e-16
ref|XP_007219752.1| hypothetical protein PRUPE_ppa024345mg [Prun...    88   1e-15
ref|XP_004161536.1| PREDICTED: DNA-directed RNA polymerases I, I...    88   1e-15
ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, I...    88   1e-15
ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prun...    87   2e-15
ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [A...    86   5e-15
gb|AFK38034.1| unknown [Lotus japonicus]                               86   7e-15
ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases I, I...    85   9e-15
ref|XP_004143184.1| PREDICTED: DNA-directed RNA polymerases I, I...    85   9e-15
ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycin...    85   1e-14
gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Mimulus...    84   2e-14
ref|XP_004511328.1| PREDICTED: DNA-directed RNA polymerases I, I...    84   2e-14
gb|AFK41303.1| unknown [Medicago truncatula]                           84   2e-14
ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III ...    84   2e-14
ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycin...    83   3e-14

>gb|EXC15864.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1 [Morus
           notabilis]
          Length = 253

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = -3

Query: 158 ITRLFRIRRTVMQMLRDRGYLVGDFEINMTRAEFLTKFGENLKREDLVINKS 3
           ITRLFRIRRTVMQMLRDR YLVGDFE+NMT+ +F  K+GEN+KREDL+INKS
Sbjct: 8   ITRLFRIRRTVMQMLRDRNYLVGDFELNMTKEQFRNKYGENMKREDLIINKS 59


>ref|XP_006451217.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
           gi|557554443|gb|ESR64457.1| hypothetical protein
           CICLE_v10009504mg [Citrus clementina]
          Length = 146

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = -3

Query: 158 ITRLFRIRRTVMQMLRDRGYLVGDFEINMTRAEFLTKFGENLKREDLVINKS 3
           I RLFRIRRTVMQMLRDRGY VGDFEINM++ +F+ KFGEN+KREDLVINK+
Sbjct: 8   IKRLFRIRRTVMQMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKA 59


>ref|XP_006451215.1| hypothetical protein CICLE_v10009504mg [Citrus clementina]
           gi|567918420|ref|XP_006451216.1| hypothetical protein
           CICLE_v10009504mg [Citrus clementina]
           gi|568843556|ref|XP_006475670.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X1
           [Citrus sinensis] gi|568843558|ref|XP_006475671.1|
           PREDICTED: DNA-directed RNA polymerases II and IV
           subunit 5A-like isoform X2 [Citrus sinensis]
           gi|568843560|ref|XP_006475672.1| PREDICTED: DNA-directed
           RNA polymerases II and IV subunit 5A-like isoform X3
           [Citrus sinensis] gi|557554441|gb|ESR64455.1|
           hypothetical protein CICLE_v10009504mg [Citrus
           clementina] gi|557554442|gb|ESR64456.1| hypothetical
           protein CICLE_v10009504mg [Citrus clementina]
          Length = 206

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = -3

Query: 158 ITRLFRIRRTVMQMLRDRGYLVGDFEINMTRAEFLTKFGENLKREDLVINKS 3
           I RLFRIRRTVMQMLRDRGY VGDFEINM++ +F+ KFGEN+KREDLVINK+
Sbjct: 8   IKRLFRIRRTVMQMLRDRGYFVGDFEINMSKEQFIAKFGENMKREDLVINKA 59


>ref|XP_002284107.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1 isoform 1 [Vitis vinifera]
           gi|225445172|ref|XP_002284110.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1 isoform 2
           [Vitis vinifera]
          Length = 206

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 41/52 (78%), Positives = 50/52 (96%)
 Frame = -3

Query: 158 ITRLFRIRRTVMQMLRDRGYLVGDFEINMTRAEFLTKFGENLKREDLVINKS 3
           I+RLFRIR+TVMQML+DRGY VGDFEINMT+ +F++KFGEN+KREDLVINK+
Sbjct: 8   ISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKA 59


>ref|XP_007013105.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 2,
           partial [Theobroma cacao] gi|508783468|gb|EOY30724.1|
           Eukaryotic rpb5 RNA polymerase subunit family protein
           isoform 2, partial [Theobroma cacao]
          Length = 181

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 40/52 (76%), Positives = 49/52 (94%)
 Frame = -3

Query: 158 ITRLFRIRRTVMQMLRDRGYLVGDFEINMTRAEFLTKFGENLKREDLVINKS 3
           I RLFRIR+TVMQML+DRGY VGDFEI MT+A+F++K+GEN+KREDLVINK+
Sbjct: 43  IKRLFRIRKTVMQMLKDRGYFVGDFEITMTKAQFISKYGENMKREDLVINKT 94


>ref|XP_007013104.1| Eukaryotic rpb5 RNA polymerase subunit family protein isoform 1
           [Theobroma cacao] gi|508783467|gb|EOY30723.1| Eukaryotic
           rpb5 RNA polymerase subunit family protein isoform 1
           [Theobroma cacao]
          Length = 206

 Score = 88.6 bits (218), Expect = 8e-16
 Identities = 40/52 (76%), Positives = 49/52 (94%)
 Frame = -3

Query: 158 ITRLFRIRRTVMQMLRDRGYLVGDFEINMTRAEFLTKFGENLKREDLVINKS 3
           I RLFRIR+TVMQML+DRGY VGDFEI MT+A+F++K+GEN+KREDLVINK+
Sbjct: 8   IKRLFRIRKTVMQMLKDRGYFVGDFEITMTKAQFISKYGENMKREDLVINKT 59


>ref|XP_007219752.1| hypothetical protein PRUPE_ppa024345mg [Prunus persica]
           gi|462416214|gb|EMJ20951.1| hypothetical protein
           PRUPE_ppa024345mg [Prunus persica]
          Length = 206

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 41/52 (78%), Positives = 47/52 (90%)
 Frame = -3

Query: 158 ITRLFRIRRTVMQMLRDRGYLVGDFEINMTRAEFLTKFGENLKREDLVINKS 3
           ITRL+R+RRTVMQMLRDR YLVGDFEINMTR +F  K+GEN+KREDL INK+
Sbjct: 8   ITRLYRVRRTVMQMLRDRKYLVGDFEINMTREQFKAKYGENMKREDLTINKT 59


>ref|XP_004161536.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
          Length = 208

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 41/52 (78%), Positives = 47/52 (90%)
 Frame = -3

Query: 158 ITRLFRIRRTVMQMLRDRGYLVGDFEINMTRAEFLTKFGENLKREDLVINKS 3
           ITRLFRIR+TV QMLRDRGY VGDFEI+MTR +F  K+GEN+KRED+VINKS
Sbjct: 8   ITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKS 59


>ref|XP_004148944.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
          Length = 207

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 41/52 (78%), Positives = 47/52 (90%)
 Frame = -3

Query: 158 ITRLFRIRRTVMQMLRDRGYLVGDFEINMTRAEFLTKFGENLKREDLVINKS 3
           ITRLFRIR+TV QMLRDRGY VGDFEI+MTR +F  K+GEN+KRED+VINKS
Sbjct: 8   ITRLFRIRKTVFQMLRDRGYFVGDFEIDMTREQFKQKYGENMKREDIVINKS 59


>ref|XP_007218418.1| hypothetical protein PRUPE_ppa011542mg [Prunus persica]
           gi|462414880|gb|EMJ19617.1| hypothetical protein
           PRUPE_ppa011542mg [Prunus persica]
          Length = 206

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 39/52 (75%), Positives = 48/52 (92%)
 Frame = -3

Query: 158 ITRLFRIRRTVMQMLRDRGYLVGDFEINMTRAEFLTKFGENLKREDLVINKS 3
           ITRL+R+R+TVMQML+DR YLVGDFEINMTR +F +K+GEN+KREDL INK+
Sbjct: 8   ITRLYRVRKTVMQMLKDRNYLVGDFEINMTREQFKSKYGENMKREDLTINKT 59


>ref|XP_006858910.1| hypothetical protein AMTR_s00068p00034280 [Amborella trichopoda]
           gi|548863022|gb|ERN20377.1| hypothetical protein
           AMTR_s00068p00034280 [Amborella trichopoda]
          Length = 206

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 38/51 (74%), Positives = 49/51 (96%)
 Frame = -3

Query: 155 TRLFRIRRTVMQMLRDRGYLVGDFEINMTRAEFLTKFGENLKREDLVINKS 3
           ++LFRIRRT+MQMLRDRGYLVGDFEINMT+A+F+ KFG+ +K++DLVINK+
Sbjct: 9   SKLFRIRRTLMQMLRDRGYLVGDFEINMTKAQFIEKFGDEVKKDDLVINKT 59


>gb|AFK38034.1| unknown [Lotus japonicus]
          Length = 206

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 40/52 (76%), Positives = 47/52 (90%)
 Frame = -3

Query: 158 ITRLFRIRRTVMQMLRDRGYLVGDFEINMTRAEFLTKFGENLKREDLVINKS 3
           IT+L RIR+TVMQMLRDR YLVGDFEINM+R EF TK+G+N+KREDL INK+
Sbjct: 8   ITKLHRIRKTVMQMLRDRNYLVGDFEINMSRHEFKTKYGDNMKREDLTINKT 59


>ref|XP_004511874.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cicer arietinum]
          Length = 206

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 39/52 (75%), Positives = 48/52 (92%)
 Frame = -3

Query: 158 ITRLFRIRRTVMQMLRDRGYLVGDFEINMTRAEFLTKFGENLKREDLVINKS 3
           ITRL+RIR+TVM+MLRDR YLVGDFEINM++ +F  K+GEN+KREDLVINK+
Sbjct: 8   ITRLYRIRKTVMEMLRDRNYLVGDFEINMSKHQFKEKYGENMKREDLVINKT 59


>ref|XP_004143184.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cucumis sativus]
           gi|449524595|ref|XP_004169307.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit RPABC1-like
           [Cucumis sativus]
          Length = 207

 Score = 85.1 bits (209), Expect = 9e-15
 Identities = 37/52 (71%), Positives = 48/52 (92%)
 Frame = -3

Query: 158 ITRLFRIRRTVMQMLRDRGYLVGDFEINMTRAEFLTKFGENLKREDLVINKS 3
           IT+LFR+R+TV+QML+DRGY VGDFE++M++ +F  KFGEN+KREDLVINKS
Sbjct: 8   ITKLFRVRKTVLQMLKDRGYFVGDFELDMSKVQFKNKFGENMKREDLVINKS 59


>ref|NP_001238044.1| uncharacterized protein LOC100499667 [Glycine max]
           gi|255625665|gb|ACU13177.1| unknown [Glycine max]
          Length = 206

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 39/50 (78%), Positives = 48/50 (96%)
 Frame = -3

Query: 152 RLFRIRRTVMQMLRDRGYLVGDFEINMTRAEFLTKFGENLKREDLVINKS 3
           RL+RIR+TVMQMLRDRG+LVGDFEINM++ EF +K+GE++KREDLVINKS
Sbjct: 10  RLYRIRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYGEHMKREDLVINKS 59


>gb|EYU34199.1| hypothetical protein MIMGU_mgv1a013932mg [Mimulus guttatus]
          Length = 206

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 38/51 (74%), Positives = 47/51 (92%)
 Frame = -3

Query: 158 ITRLFRIRRTVMQMLRDRGYLVGDFEINMTRAEFLTKFGENLKREDLVINK 6
           ITRL R+R+ VMQML+DRGY+VGDFEI+MT+ +FL K+GEN+KREDLVINK
Sbjct: 8   ITRLVRVRKNVMQMLKDRGYMVGDFEIDMTKYQFLQKYGENMKREDLVINK 58


>ref|XP_004511328.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC1-like [Cicer arietinum]
          Length = 206

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 39/52 (75%), Positives = 47/52 (90%)
 Frame = -3

Query: 158 ITRLFRIRRTVMQMLRDRGYLVGDFEINMTRAEFLTKFGENLKREDLVINKS 3
           ITRL+RIR+TVM MLRDR YLVGDFE+NM++ EF  K+GEN+KREDLVINK+
Sbjct: 8   ITRLYRIRKTVMVMLRDRNYLVGDFEVNMSKHEFKEKYGENMKREDLVINKT 59


>gb|AFK41303.1| unknown [Medicago truncatula]
          Length = 206

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 38/52 (73%), Positives = 48/52 (92%)
 Frame = -3

Query: 158 ITRLFRIRRTVMQMLRDRGYLVGDFEINMTRAEFLTKFGENLKREDLVINKS 3
           ITRL+RIR+TVMQML+DR YLVGDFE+NM++ +F  K+GEN+KREDLVINK+
Sbjct: 8   ITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLVINKT 59


>ref|XP_003610652.1| DNA-directed RNA polymerases I, II, and III subunit RPABC1
           [Medicago truncatula] gi|355511987|gb|AES93610.1|
           DNA-directed RNA polymerases I, II, and III subunit
           RPABC1 [Medicago truncatula]
          Length = 410

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 38/52 (73%), Positives = 48/52 (92%)
 Frame = -3

Query: 158 ITRLFRIRRTVMQMLRDRGYLVGDFEINMTRAEFLTKFGENLKREDLVINKS 3
           ITRL+RIR+TVMQML+DR YLVGDFE+NM++ +F  K+GEN+KREDLVINK+
Sbjct: 212 ITRLYRIRKTVMQMLKDRNYLVGDFELNMSKHDFKDKYGENMKREDLVINKT 263


>ref|NP_001237497.1| uncharacterized protein LOC100306098 [Glycine max]
           gi|255627545|gb|ACU14117.1| unknown [Glycine max]
          Length = 206

 Score = 83.2 bits (204), Expect = 3e-14
 Identities = 39/52 (75%), Positives = 48/52 (92%)
 Frame = -3

Query: 158 ITRLFRIRRTVMQMLRDRGYLVGDFEINMTRAEFLTKFGENLKREDLVINKS 3
           I RL+RIR+TVMQMLRDR +LVGDFEINM++ EF +K+GE++KREDLVINKS
Sbjct: 8   IGRLYRIRKTVMQMLRDRNFLVGDFEINMSKHEFKSKYGEHMKREDLVINKS 59