BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00007926
         (2278 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15459.3| unnamed protein product [Vitis vinifera]              868   0.0  
emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]   868   0.0  
ref|XP_007211308.1| hypothetical protein PRUPE_ppa001468mg [Prun...   867   0.0  
ref|XP_007036533.1| CRS1 / YhbY domain-containing protein [Theob...   845   0.0  
ref|XP_004300521.1| PREDICTED: chloroplastic group IIA intron sp...   838   0.0  
gb|EXB56911.1| Chloroplastic group IIA intron splicing facilitat...   837   0.0  
ref|XP_002317913.2| hypothetical protein POPTR_0012s05260g [Popu...   810   0.0  
ref|XP_006842297.1| hypothetical protein AMTR_s00079p00107040 [A...   797   0.0  
ref|XP_002883129.1| EMB1865 [Arabidopsis lyrata subsp. lyrata] g...   796   0.0  
ref|XP_006485796.1| PREDICTED: chloroplastic group IIA intron sp...   795   0.0  
ref|XP_006341605.1| PREDICTED: chloroplastic group IIA intron sp...   795   0.0  
ref|XP_003533366.1| PREDICTED: chloroplastic group IIA intron sp...   794   0.0  
ref|XP_006406610.1| hypothetical protein EUTSA_v10020034mg [Eutr...   793   0.0  
ref|XP_006440981.1| hypothetical protein CICLE_v10018859mg [Citr...   791   0.0  
ref|XP_006440978.1| hypothetical protein CICLE_v10018859mg [Citr...   791   0.0  
ref|XP_004235759.1| PREDICTED: chloroplastic group IIA intron sp...   791   0.0  
ref|NP_188468.1| CRS1 / YhbY domain-containing protein EMB1865 [...   790   0.0  
ref|XP_003530015.2| PREDICTED: chloroplastic group IIA intron sp...   788   0.0  
ref|XP_002532154.1| conserved hypothetical protein [Ricinus comm...   786   0.0  
ref|XP_004512920.1| PREDICTED: chloroplastic group IIA intron sp...   772   0.0  

>emb|CBI15459.3| unnamed protein product [Vitis vinifera]
          Length = 830

 Score =  868 bits (2243), Expect = 0.0
 Identities = 460/731 (62%), Positives = 527/731 (72%), Gaps = 16/731 (2%)
 Frame = +3

Query: 60   SNTLRN--TRRGNY----------SSSKSRAPSAPWLNKWPSEEKNDDSEKR---DRAED 194
            SN LRN  T+R  Y          S++   + +  W+NKWPS   + +SE +    +  D
Sbjct: 43   SNNLRNRKTKRSLYPWDHQNSRKSSNTNPNSSTKSWINKWPSPNPSIESEHKGIDSKGRD 102

Query: 195  RVESRYFDGDKGRSAIERIVFRLRNLGIASXXXXXXXXXXXXXXXXXXXXAEMPCTGEER 374
              ESRYFDG  G SAIERIV RLRNLG+ S                      MP TG+E+
Sbjct: 103  GTESRYFDGRSGTSAIERIVLRLRNLGLGSDDEDKNEGEVESGDT-------MPVTGDEK 155

Query: 375  LGDLLQRTWSRPDSVVLDCEDDDRMLLPWXXXXXXXXXXXXXXLKKRRVKAPSLAELTLE 554
            LGDLLQR W RPDS++++ ED+D M+LPW              LK+R V+AP+LAELT+E
Sbjct: 156  LGDLLQRDWVRPDSMLIEDEDEDDMILPWERGEERQEEEGDGRLKRRAVRAPTLAELTIE 215

Query: 555  DVXXXXXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETLARDMKKAHE 734
            D                IN+PKAG+TQ +L KIH+KWRK ELVRLKFHE LA DMK AHE
Sbjct: 216  DEELRRLRRLGMTIRERINVPKAGITQAVLGKIHEKWRKEELVRLKFHEALAHDMKTAHE 275

Query: 735  IVERRTGGLVIWRSGSVMVVYRGSNYERPSLRTQSVSMVVDGPFVPNVSFADHLAAEDDK 914
            IVERRTGGLV WRSGSVMVV+RG+NYE P  + Q V    D  FVP+VS  D+ A  +D 
Sbjct: 276  IVERRTGGLVTWRSGSVMVVFRGTNYEGPP-KPQPVDGEGDSLFVPDVSSVDNPAMRNDN 334

Query: 915  ISSSIPEKNQRTFQNQDPXXXXXXXXXXFNSLLDGLGPRFLDWWGTGLLPVDADMLPAFV 1094
                  EK     +N             +NSLLDGLGPRF+DWWGTG+LPVD D+LP  +
Sbjct: 335  NGGPTLEKGSLPVRNPVHAENMTEEEAEYNSLLDGLGPRFVDWWGTGVLPVDGDLLPQSI 394

Query: 1095 PGYKTPFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVWEKSL 1274
            PGYKTP R+LPTGMR RLTNAEMTNLRKL+KSLPCHFALGRNRNHQGLA+AI+K+WEKS+
Sbjct: 395  PGYKTPLRILPTGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSI 454

Query: 1275 VVKIAVKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIIIYRGKDFLPTSVAAALAERQE 1454
            VVKIAVK GIQNTNNKLMA             RNKYYI+IYRGKDFLPTSVAAAL+ER+E
Sbjct: 455  VVKIAVKPGIQNTNNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALSEREE 514

Query: 1455 LTKKVQDVEEEVRIG-AVGIATSEGFEGKAAAGTLAEFHEAQARWGREISTEEHENMQEE 1631
            LTK +Q VEE+VR G A  I + E   G+  AGTLAEF+EAQARWGREIS EEHE M EE
Sbjct: 515  LTKHIQVVEEKVRTGGAEAIPSGEDGVGQPLAGTLAEFYEAQARWGREISAEEHEKMIEE 574

Query: 1632 ASRAKTARIVRKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFMFRR 1811
            ASRAK+AR+V++IEH                   E SM+PAGPSDDQETITDEERFMFRR
Sbjct: 575  ASRAKSARVVKRIEHKLALAQAKKLRAERLLAKIEASMIPAGPSDDQETITDEERFMFRR 634

Query: 1812 VGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYESGGI 1991
            +GLRMKAYL LG+RGVFDGVIENMHLHWKHRELVKLISKQKTL+F++DTARLLEYESGGI
Sbjct: 635  LGLRMKAYLLLGVRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESGGI 694

Query: 1992 LVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELER 2171
            LVAIERVPKGYALIYYRGKNY+RP+S+RPRNLLTKAKALKRSVAMQRHEALSQHISELER
Sbjct: 695  LVAIERVPKGYALIYYRGKNYRRPVSLRPRNLLTKAKALKRSVAMQRHEALSQHISELER 754

Query: 2172 TIEGMKSEINE 2204
            TIE MK EI +
Sbjct: 755  TIEQMKMEIGD 765


>emb|CAN72582.1| hypothetical protein VITISV_035294 [Vitis vinifera]
          Length = 850

 Score =  868 bits (2243), Expect = 0.0
 Identities = 460/731 (62%), Positives = 527/731 (72%), Gaps = 16/731 (2%)
 Frame = +3

Query: 60   SNTLRN--TRRGNY----------SSSKSRAPSAPWLNKWPSEEKNDDSEKR---DRAED 194
            SN LRN  T+R  Y          S++   + +  W+NKWPS   + +SE +    +  D
Sbjct: 43   SNNLRNRKTKRSLYPWDHQNSRKSSNTNPNSSTKSWINKWPSPNPSIESEHKGIDSKGRD 102

Query: 195  RVESRYFDGDKGRSAIERIVFRLRNLGIASXXXXXXXXXXXXXXXXXXXXAEMPCTGEER 374
              ESRYFDG  G SAIERIV RLRNLG+ S                      MP TG+E+
Sbjct: 103  GTESRYFDGRSGTSAIERIVLRLRNLGLGSDDEDKNEGEVESGDT-------MPVTGDEK 155

Query: 375  LGDLLQRTWSRPDSVVLDCEDDDRMLLPWXXXXXXXXXXXXXXLKKRRVKAPSLAELTLE 554
            LGDLLQR W RPDS++++ ED+D M+LPW              LK+R V+AP+LAELT+E
Sbjct: 156  LGDLLQRDWVRPDSMLIEDEDEDDMILPWERGEERQEEEGDGRLKRRAVRAPTLAELTIE 215

Query: 555  DVXXXXXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETLARDMKKAHE 734
            D                IN+PKAG+TQ +L KIH+KWRK ELVRLKFHE LA DMK AHE
Sbjct: 216  DEELRRLRRLGMTIRERINVPKAGITQAVLGKIHEKWRKEELVRLKFHEALAHDMKTAHE 275

Query: 735  IVERRTGGLVIWRSGSVMVVYRGSNYERPSLRTQSVSMVVDGPFVPNVSFADHLAAEDDK 914
            IVERRTGGLV WRSGSVMVV+RG+NYE P  + Q V    D  FVP+VS  D+ A  +D 
Sbjct: 276  IVERRTGGLVTWRSGSVMVVFRGTNYEGPP-KPQPVDGEGDSLFVPDVSSVDNPAMRNDN 334

Query: 915  ISSSIPEKNQRTFQNQDPXXXXXXXXXXFNSLLDGLGPRFLDWWGTGLLPVDADMLPAFV 1094
                  EK     +N             +NSLLDGLGPRF+DWWGTG+LPVD D+LP  +
Sbjct: 335  NGGPTLEKGSLPVRNPVHAENMTEEEAEYNSLLDGLGPRFVDWWGTGVLPVDGDLLPQSI 394

Query: 1095 PGYKTPFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVWEKSL 1274
            PGYKTP R+LPTGMR RLTNAEMTNLRKL+KSLPCHFALGRNRNHQGLA+AI+K+WEKS+
Sbjct: 395  PGYKTPLRILPTGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSI 454

Query: 1275 VVKIAVKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIIIYRGKDFLPTSVAAALAERQE 1454
            VVKIAVK GIQNTNNKLMA             RNKYYI+IYRGKDFLPTSVAAAL+ER+E
Sbjct: 455  VVKIAVKPGIQNTNNKLMAEEIKNLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALSEREE 514

Query: 1455 LTKKVQDVEEEVRIG-AVGIATSEGFEGKAAAGTLAEFHEAQARWGREISTEEHENMQEE 1631
            LTK +Q VEE+VR G A  I + E   G+  AGTLAEF+EAQARWGREIS EEHE M EE
Sbjct: 515  LTKHIQVVEEKVRTGGAEAIPSGEDGVGQPLAGTLAEFYEAQARWGREISAEEHEKMIEE 574

Query: 1632 ASRAKTARIVRKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFMFRR 1811
            ASRAK+AR+V++IEH                   E SM+PAGPSDDQETITDEERFMFRR
Sbjct: 575  ASRAKSARVVKRIEHKLALAQAKKLRPERLLAKIEASMIPAGPSDDQETITDEERFMFRR 634

Query: 1812 VGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYESGGI 1991
            +GLRMKAYL LG+RGVFDGVIENMHLHWKHRELVKLISKQKTL+F++DTARLLEYESGGI
Sbjct: 635  LGLRMKAYLLLGVRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEYESGGI 694

Query: 1992 LVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELER 2171
            LVAIERVPKGYALIYYRGKNY+RP+S+RPRNLLTKAKALKRSVAMQRHEALSQHISELER
Sbjct: 695  LVAIERVPKGYALIYYRGKNYRRPVSLRPRNLLTKAKALKRSVAMQRHEALSQHISELER 754

Query: 2172 TIEGMKSEINE 2204
            TIE MK EI +
Sbjct: 755  TIEQMKMEIGD 765


>ref|XP_007211308.1| hypothetical protein PRUPE_ppa001468mg [Prunus persica]
            gi|462407043|gb|EMJ12507.1| hypothetical protein
            PRUPE_ppa001468mg [Prunus persica]
          Length = 820

 Score =  867 bits (2239), Expect = 0.0
 Identities = 459/722 (63%), Positives = 527/722 (72%), Gaps = 13/722 (1%)
 Frame = +3

Query: 99   SSKSRAPSAPWLNKWPSE------------EKNDDSEKRDRAEDRVESRYFDGDKGRSAI 242
            S KS+ PSAPWLN WP              EK ++S  RD+A     +RYFD +KG+SAI
Sbjct: 61   SHKSKPPSAPWLNTWPPRNSPAELPCQKVNEKVNESHGRDQAVKANTTRYFDKNKGQSAI 120

Query: 243  ERIVFRLRNLGIASXXXXXXXXXXXXXXXXXXXXAEMPCTGEERLGDLLQRTWSRPDSVV 422
            ERIV RLRNLG+ S                         +GEE+LGDLLQR W RPD V+
Sbjct: 121  ERIVLRLRNLGLGSDDEEEDDGLGLDGQDSMQPAE----SGEEKLGDLLQREWVRPDYVL 176

Query: 423  LDCEDDDRMLLPWXXXXXXXXXXXXXXLKKRRVKAPSLAELTLEDVXXXXXXXXXXXXXX 602
             + + +D + LPW              L+KRRVKAPSLAELT+ED               
Sbjct: 177  AEQKSNDEVALPWEKEDEISEEEEVKGLRKRRVKAPSLAELTIEDEELKRLRRMGMVLRE 236

Query: 603  XINIPKAGVTQVILEKIHDKWRKAELVRLKFHETLARDMKKAHEIVERRTGGLVIWRSGS 782
             I++PKAG+TQ +LEKIHD WRK ELVRLKFHE LA DMK AHEIVERRTGGLV+WRSGS
Sbjct: 237  RISVPKAGITQAVLEKIHDTWRKEELVRLKFHEVLALDMKTAHEIVERRTGGLVLWRSGS 296

Query: 783  VMVVYRGSNYERPSLRTQSVSMVVDGPFVPNVSFADHLAAEDDKISSSIPEKNQRTFQNQ 962
            VMVVYRGSNY+ PS ++Q+V       F+P+VS A+  A      ++S P+ N++  +  
Sbjct: 297  VMVVYRGSNYKGPS-KSQTVDREGGALFIPDVSSAETSATRSGNDATSGPDNNEKAVKIP 355

Query: 963  DPXXXXXXXXXXFNSLLDGLGPRFLDWWGTGLLPVDADMLPAFVPGYKTPFRLLPTGMRS 1142
                        FNSLLD LGPRF++WWGTG+LPVDAD+LP  +PGYKTPFRLLPTGMRS
Sbjct: 356  AHLPNMTEEEAEFNSLLDDLGPRFVEWWGTGVLPVDADLLPKTIPGYKTPFRLLPTGMRS 415

Query: 1143 RLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVWEKSLVVKIAVKRGIQNTNNK 1322
            RLTNAEMTNLRKL+KSLPCHFALGRNRNHQGLASAI+K+WEKS V KIAVKRGIQNTNNK
Sbjct: 416  RLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLASAIIKLWEKSSVAKIAVKRGIQNTNNK 475

Query: 1323 LMAXXXXXXXXXXXXXRNKYYIIIYRGKDFLPTSVAAALAERQELTKKVQDVEEEVRIGA 1502
            LMA             RNKYYI+ YRGKDFLPTSVAAALAERQELTK+VQDVEE++RI A
Sbjct: 476  LMAEELKTLTGGVLLLRNKYYIVFYRGKDFLPTSVAAALAERQELTKQVQDVEEKMRIKA 535

Query: 1503 VGIATSEGFEGKAAAGTLAEFHEAQARWGREISTEEHENMQEEASRAKTARIVRKIEHXX 1682
            +  A+S   EG+A AGTLAEF+EAQARWGREIS EE E M EE S+AK AR+V++IEH  
Sbjct: 536  IDAASSGAEEGQALAGTLAEFYEAQARWGREISAEEREKMIEEDSKAKNARLVKRIEHKL 595

Query: 1683 XXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFMFRRVGLRMKAYLPLGIRGVF 1862
                             E SM+PAGP  DQET+TDEER MFRRVGLRMKAYLPLGIRGVF
Sbjct: 596  GVAQAKKLRAEKLLSKIESSMLPAGPDYDQETVTDEERVMFRRVGLRMKAYLPLGIRGVF 655

Query: 1863 DGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYESGGILVAIERVPKGYALIYYR 2042
            DGV+ENMHLHWKHRELVKLISKQKTL+F++DTARLLE+ESGGILVAIERVPKGYALIYYR
Sbjct: 656  DGVVENMHLHWKHRELVKLISKQKTLAFVEDTARLLEFESGGILVAIERVPKGYALIYYR 715

Query: 2043 GKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEGMKSEIN-EDDLYR 2219
            GKNYQRPI++RPRNLLTKAKALKRSVA+QRHEALSQHISELE+TIE M SEI   +D+  
Sbjct: 716  GKNYQRPITLRPRNLLTKAKALKRSVAIQRHEALSQHISELEKTIEQMSSEIGVSEDIAD 775

Query: 2220 ES 2225
            ES
Sbjct: 776  ES 777


>ref|XP_007036533.1| CRS1 / YhbY domain-containing protein [Theobroma cacao]
            gi|508773778|gb|EOY21034.1| CRS1 / YhbY domain-containing
            protein [Theobroma cacao]
          Length = 919

 Score =  845 bits (2184), Expect = 0.0
 Identities = 458/725 (63%), Positives = 521/725 (71%), Gaps = 19/725 (2%)
 Frame = +3

Query: 81   RRGNYSSSKSRAPSAPW----------------LNKWPS-EEKNDDSEKRDRAEDRVESR 209
            R GN  SSK    S PW                L  W S  +K   S+  D+ +  VE+R
Sbjct: 117  RTGNSPSSKFNRYSYPWDQEASVPPNSSASSSSLQAWSSPSQKVIQSDGDDKTD--VETR 174

Query: 210  YFDGDKGRSAIERIVFRLRNLGIASXXXXXXXXXXXXXXXXXXXXAEMPCTGEERLGDLL 389
            YFD DK +SAIERIV RLRNLG+ S                       P TGEERLGDLL
Sbjct: 175  YFDRDKSQSAIERIVLRLRNLGLGSDDEDEGEDETDQYN-------STPVTGEERLGDLL 227

Query: 390  QRTWSRPDSVVLDCEDDDRMLLPWXXXXXXXXXXXXXXL--KKRRVKAPSLAELTLEDVX 563
            +R W RPD+++++ E ++ +L PW              L  KKRRV+AP+LAELT+ED  
Sbjct: 228  KREWVRPDTMLIEREKEEAVL-PWERDEAEVEVVKEGVLGVKKRRVRAPTLAELTIEDEE 286

Query: 564  XXXXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETLARDMKKAHEIVE 743
                          IN+PKAG+TQ +LEKIHDKWRK ELVRLKFHE LA DMK AHEIVE
Sbjct: 287  LRRLRRMGMYLRERINVPKAGITQAVLEKIHDKWRKEELVRLKFHEVLATDMKTAHEIVE 346

Query: 744  RRTGGLVIWRSGSVMVVYRGSNYERPSLRTQSVSMVVDGPFVPNVSFADHLAAEDDKISS 923
            RRTGGLV+WRSGSVMVVYRGSNYE PS R+QS+    +  F+P+VS A +     +   +
Sbjct: 347  RRTGGLVLWRSGSVMVVYRGSNYEGPS-RSQSIDREGEALFIPDVSSASNAVRGSETGKT 405

Query: 924  SIPEKNQRTFQNQDPXXXXXXXXXXFNSLLDGLGPRFLDWWGTGLLPVDADMLPAFVPGY 1103
            S PEK +      +           +NSLLDG+GPRF++WWGTG+LPVDAD+LP  +PGY
Sbjct: 406  STPEKCEPVVVKPERSESMTEEEAEYNSLLDGVGPRFVEWWGTGVLPVDADLLPQKIPGY 465

Query: 1104 KTPFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVWEKSLVVK 1283
            KTPFRLLP GMR RLTNAEMTNLRKL+KSLPCHFALGRNRNHQGLA+AI+K+WEKSLVVK
Sbjct: 466  KTPFRLLPAGMRPRLTNAEMTNLRKLAKSLPCHFALGRNRNHQGLAAAIIKLWEKSLVVK 525

Query: 1284 IAVKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIIIYRGKDFLPTSVAAALAERQELTK 1463
            IAVKRGIQNTNNKLMA             RNKY+I+IYRGKDFLPTSVAAALAERQELTK
Sbjct: 526  IAVKRGIQNTNNKLMAEELKNLTGGVLLLRNKYFIVIYRGKDFLPTSVAAALAERQELTK 585

Query: 1464 KVQDVEEEVRIGAVGIATSEGFEGKAAAGTLAEFHEAQARWGREISTEEHENMQEEASRA 1643
            ++QDVEE+VRI AV  A S   +G+A AGTLAEF+EAQA WGREIS EE E M EEAS+A
Sbjct: 586  QIQDVEEKVRIRAVEPAQSGEDKGEAPAGTLAEFYEAQACWGREISAEEREKMIEEASKA 645

Query: 1644 KTARIVRKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFMFRRVGLR 1823
            K AR+V+++EH                   E SM+PA P  DQETITDEER MFRRVGLR
Sbjct: 646  KHARLVKRVEHKLAVAQAKKLRAERLLAKIESSMIPAAPDYDQETITDEERVMFRRVGLR 705

Query: 1824 MKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYESGGILVAI 2003
            MK YLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTL+F++DTARLLE+ESGGILVAI
Sbjct: 706  MKPYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTARLLEFESGGILVAI 765

Query: 2004 ERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEG 2183
            ERVPKGYALIYYRGKNY RPIS+RPRNLLTKAKALKRSVAMQRHEALSQHISELERTIE 
Sbjct: 766  ERVPKGYALIYYRGKNYHRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEE 825

Query: 2184 MKSEI 2198
            MK EI
Sbjct: 826  MKKEI 830


>ref|XP_004300521.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 820

 Score =  838 bits (2166), Expect = 0.0
 Identities = 452/738 (61%), Positives = 521/738 (70%), Gaps = 16/738 (2%)
 Frame = +3

Query: 33   IRNTQQKGRSNTLRNTRRGNYSSSKSRAPSAPWLNKWPSEEKNDDSEKRDRAEDRVE--- 203
            +R T+  G  N    ++  + SS+      APWLNKWPS  +      R +  DRV+   
Sbjct: 44   LRTTEHGGNPNARHKSKPSSSSST------APWLNKWPSRGQAPAEPPRQKFSDRVKESD 97

Query: 204  ---------SRYFDGDKGRSAIERIVFRLRNLGIASXXXXXXXXXXXXXXXXXXXXAEMP 356
                     +RY D DKG+SAIERIVFRLRNLG+                        MP
Sbjct: 98   GREKPSSNAARYVDKDKGQSAIERIVFRLRNLGLGDDEEEEESGDGVELD-------SMP 150

Query: 357  C-TGEERLGDLLQRTWSRPDSVVLDCEDDDRMLLPWXXXXXXXXXXXXXX--LKKRRVKA 527
              +G E+LGDLLQR W RPD ++ + + DD + LPW                 K RR KA
Sbjct: 151  AASGAEKLGDLLQREWVRPDYILAEEKGDDDVALPWEKEEEELSEDEEVKGMRKARRSKA 210

Query: 528  PSLAELTLEDVXXXXXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETL 707
            PSLAELT+ED                I++PKAG+TQ +LEKIHDKWRK ELVRLKFHE L
Sbjct: 211  PSLAELTIEDEELRRLRRLGMVLRERISVPKAGITQAVLEKIHDKWRKEELVRLKFHEVL 270

Query: 708  ARDMKKAHEIVERRTGGLVIWRSGSVMVVYRGSNYERPSLRTQSVSMVVDGPFVPNVSFA 887
            A DMK AHEIVERRTGGLV+WRSGSVMVVYRGSNY+ PS +++      D  F+P+VS A
Sbjct: 271  AHDMKTAHEIVERRTGGLVLWRSGSVMVVYRGSNYKGPS-KSEPAGRGGDALFIPDVSSA 329

Query: 888  DHLAAEDDKISSSIPEKNQRTFQNQDPXXXXXXXXXX-FNSLLDGLGPRFLDWWGTGLLP 1064
            +         ++S P+K ++  +  +P           FNSLLD LGPRF+++WGTG+LP
Sbjct: 330  ETSVTRGGNDATSAPDKTEQAVKIPEPLPKKMTDEEAEFNSLLDELGPRFVEYWGTGILP 389

Query: 1065 VDADMLPAFVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLAS 1244
            VDAD+LP  +PGYKTPFRLLPTGMRSRLTNAEMTNLRKL+KS+PCHFALGRNRNHQGLAS
Sbjct: 390  VDADLLPKTIPGYKTPFRLLPTGMRSRLTNAEMTNLRKLAKSIPCHFALGRNRNHQGLAS 449

Query: 1245 AIVKVWEKSLVVKIAVKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIIIYRGKDFLPTS 1424
            AI+KVWEKS V KIAVKRGIQNTNNK+MA             RNKYYI+IYRGKDF+PT+
Sbjct: 450  AILKVWEKSSVAKIAVKRGIQNTNNKIMAEELKALTGGVLLLRNKYYIVIYRGKDFVPTT 509

Query: 1425 VAAALAERQELTKKVQDVEEEVRIGAVGIATSEGFEGKAAAGTLAEFHEAQARWGREIST 1604
            VA ALAERQELTK+VQDVEE VRI  +  A S   EG+A AGTLAEF+EAQARWGREIS 
Sbjct: 510  VATALAERQELTKQVQDVEEIVRIKPIDAAASSTEEGQALAGTLAEFYEAQARWGREISA 569

Query: 1605 EEHENMQEEASRAKTARIVRKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETIT 1784
            EE + M EE S+AK AR  ++IEH                   E +M+PAGP  DQETIT
Sbjct: 570  EERKKMIEEDSKAKMARRAKRIEHKLGVAQAKKLRAESLLNKIESAMLPAGPDYDQETIT 629

Query: 1785 DEERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTAR 1964
            DEER MFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTL+F++D+AR
Sbjct: 630  DEERVMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDSAR 689

Query: 1965 LLEYESGGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEAL 2144
            LLEYESGGILVAIERVPKGYALIYYRGKNYQRPI++RPRNLLTKAKALKRSVAMQRHEAL
Sbjct: 690  LLEYESGGILVAIERVPKGYALIYYRGKNYQRPITLRPRNLLTKAKALKRSVAMQRHEAL 749

Query: 2145 SQHISELERTIEGMKSEI 2198
            SQHI ELERTIE M+SEI
Sbjct: 750  SQHIEELERTIEQMRSEI 767


>gb|EXB56911.1| Chloroplastic group IIA intron splicing facilitator CRS1 [Morus
            notabilis]
          Length = 838

 Score =  837 bits (2163), Expect = 0.0
 Identities = 449/715 (62%), Positives = 514/715 (71%), Gaps = 14/715 (1%)
 Frame = +3

Query: 96   SSSKSRAPSAPWLNKWPSEEKND----DSEKRDRAEDRVESRYFDGDKGRSAIERIVFRL 263
            SS + + PSAPWLNKWP  E +D    +S  RDR +      Y D D+GR+AIERIV RL
Sbjct: 73   SSHRHKPPSAPWLNKWPPVESSDRKVAESTDRDRTDRPDTVGYVDRDRGRNAIERIVLRL 132

Query: 264  RNLGIASXXXXXXXXXXXXXXXXXXXXAEMPCTGEERLGDLLQRTWSRPDSVVLDCEDDD 443
            RNLG+ S                      MP TGEE+LGDLL+R W RPD V+ + E  D
Sbjct: 133  RNLGLGSDDEDEDDKEGDIGLDGQDA---MPVTGEEKLGDLLRREWIRPDFVLEEEESKD 189

Query: 444  RMLLPWXXXXXXXXXXXXXX-LKKRRVKAPSLAELTLEDVXXXXXXXXXXXXXXXINIPK 620
             + LPW               L+KRRV AP+LAELT+ED                I++PK
Sbjct: 190  DLTLPWEREEEEKGVDEGTRELRKRRVNAPTLAELTIEDEELRRLRRMGMFLRDRISVPK 249

Query: 621  AGVTQVILEKIHDKWRKAELVRLKFHETLARDMKKAHEIVERRTGGLVIWRSGSVMVVYR 800
            AG+TQ +LEKIHDKWRK ELVRLKFHE LA DMK AHEIVERRTGGLV WRSGSVMVVYR
Sbjct: 250  AGLTQAVLEKIHDKWRKEELVRLKFHEVLAHDMKTAHEIVERRTGGLVTWRSGSVMVVYR 309

Query: 801  GSNYERPSLRTQSVSMVVDGPFVPNVSFADHLAAEDDKISSSIPEKNQRTFQNQDPXXXX 980
            GSNYE P  +TQ V+   D  F+P+VS A++         +S  EK++   +N       
Sbjct: 310  GSNYEGPP-KTQPVNKERDALFIPDVSSAENFLTRSGDSLTSNAEKSETPVRNPVSVQNM 368

Query: 981  XXXXXXFNSLLDGLGPRFLDWWGTGLLPVDADMLPAFVPGYKTPFRLLPTGMRSRLTNAE 1160
                  FNSLLD LGPRF +WWGTG++PVDAD+LP  +PGYKTPFRLLPTGMRSRLTN E
Sbjct: 369  TEEEAEFNSLLDDLGPRFDEWWGTGVIPVDADLLPPKIPGYKTPFRLLPTGMRSRLTNGE 428

Query: 1161 MTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVWEKSLVVKIAVKRGIQNTNNKLMAXXX 1340
            MTNLRK++KSLP HFALGRNRNHQGLA+AI+K+WEKSLV KIAVKRGIQNTNNKLMA   
Sbjct: 429  MTNLRKVAKSLPSHFALGRNRNHQGLAAAIIKLWEKSLVAKIAVKRGIQNTNNKLMAEEL 488

Query: 1341 XXXXXXXXXXRNKYYIIIYRGKDFLPTSVAAALAERQELTKKVQDVEEEVRI-------- 1496
                      RNKYYI+IYRGKDFLPT+VAA LAERQ+L K+VQD+EE+VR+        
Sbjct: 489  KNLTGGVLLLRNKYYIVIYRGKDFLPTTVAATLAERQKLAKQVQDLEEQVRVQDIEQKMQ 548

Query: 1497 -GAVGIATSEGFEGKAAAGTLAEFHEAQARWGREISTEEHENMQEEASRAKTARIVRKIE 1673
              AV    S   EG+A AGTLAEF+EAQARWGREI++EE E M EEA+ AK AR+V++IE
Sbjct: 549  KKAVDSVPSGEEEGQALAGTLAEFYEAQARWGREITSEEREKMIEEAAVAKHARLVKRIE 608

Query: 1674 HXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFMFRRVGLRMKAYLPLGIR 1853
            H                   E SMVPAGP  DQETIT+EER MFRRVGLRMKAYLPLGIR
Sbjct: 609  HKAAVAQAKKLRAEKLLAKIEASMVPAGPDYDQETITEEERVMFRRVGLRMKAYLPLGIR 668

Query: 1854 GVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYESGGILVAIERVPKGYALI 2033
            GVFDGVIENMHLHWKHRELVKLI+KQKTL+F++DTARLLEYESGGILVAIERVPKG+ALI
Sbjct: 669  GVFDGVIENMHLHWKHRELVKLITKQKTLAFVEDTARLLEYESGGILVAIERVPKGFALI 728

Query: 2034 YYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEGMKSEI 2198
            YYRGKNY+RPIS+RPRNLLTKAKALKRSVAMQRHEALSQHISELE TIE M+ +I
Sbjct: 729  YYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISELETTIEQMQDKI 783


>ref|XP_002317913.2| hypothetical protein POPTR_0012s05260g [Populus trichocarpa]
            gi|550326426|gb|EEE96133.2| hypothetical protein
            POPTR_0012s05260g [Populus trichocarpa]
          Length = 807

 Score =  810 bits (2093), Expect = 0.0
 Identities = 433/719 (60%), Positives = 510/719 (70%), Gaps = 6/719 (0%)
 Frame = +3

Query: 60   SNTLRNTRRGNYSSSKSRAPSAPWLNKW-PSEEKNDDSEKRDRAEDRVESRYFDGDKGRS 236
            S++LR  +     + K++  +  W++KW PS+  +  +   + ++++    YF  DKG++
Sbjct: 46   SSSLRTNK-----TPKTQQKNPNWISKWKPSQNHSIKNPPSEVSQEK--PHYFSNDKGQN 98

Query: 237  AIERIVFRLRNLGIASXXXXXXXXXXXXXXXXXXXXAEMPCTGEERLGDLLQRTWSRPDS 416
            AIERIV RLRNLG+ S                         TGEERLGDLL+R W RPD+
Sbjct: 99   AIERIVLRLRNLGLGSDDEDELEGLEGSEINGGGL------TGEERLGDLLKREWVRPDT 152

Query: 417  VVLDCE---DDDRMLLPWXXXXXXXXXXXXXXL--KKRRVKAPSLAELTLEDVXXXXXXX 581
            VV   +   D D  +LPW                 +KRR KAP+LAELT+ED        
Sbjct: 153  VVFSNDEGSDSDESVLPWEREERGAVEMEGGIESGRKRRGKAPTLAELTIEDEELRRLRR 212

Query: 582  XXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETLARDMKKAHEIVERRTGGL 761
                    I+IPKAG+T  +LE IHD+WRK ELVRLKFHE LA DMK AHEIVERRTGGL
Sbjct: 213  MGMFIRERISIPKAGITNAVLENIHDRWRKEELVRLKFHEVLAHDMKTAHEIVERRTGGL 272

Query: 762  VIWRSGSVMVVYRGSNYERPSLRTQSVSMVVDGPFVPNVSFADHLAAEDDKISSSIPEKN 941
            VIWR+GSVMVV+RG+NY+ P  + Q      D  FVP+VS  D +      I++S  EK+
Sbjct: 273  VIWRAGSVMVVFRGTNYQGPPSKLQPADREGDALFVPDVSSTDSVMTRSSNIATSSSEKS 332

Query: 942  QRTFQNQDPXXXXXXXXXXFNSLLDGLGPRFLDWWGTGLLPVDADMLPAFVPGYKTPFRL 1121
            +   +  +P           NSLLD LGPRF +WWGTGLLPVDAD+LP  VP YKTPFRL
Sbjct: 333  KLVMRITEPTENMTEEEAELNSLLDDLGPRFEEWWGTGLLPVDADLLPPKVPCYKTPFRL 392

Query: 1122 LPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVWEKSLVVKIAVKRG 1301
            LP GMR+RLTNAEMTN+RKL+K+LPCHFALGRNRNHQGLA AI+K+WEKSLV KIAVKRG
Sbjct: 393  LPVGMRARLTNAEMTNMRKLAKALPCHFALGRNRNHQGLAVAILKLWEKSLVAKIAVKRG 452

Query: 1302 IQNTNNKLMAXXXXXXXXXXXXXRNKYYIIIYRGKDFLPTSVAAALAERQELTKKVQDVE 1481
            IQNTNNKLMA             RNKYYI+I+RGKDFLP SVAAALAERQE+TK++QDVE
Sbjct: 453  IQNTNNKLMADELKMLTGGVLLLRNKYYIVIFRGKDFLPQSVAAALAERQEVTKQIQDVE 512

Query: 1482 EEVRIGAVGIATSEGFEGKAAAGTLAEFHEAQARWGREISTEEHENMQEEASRAKTARIV 1661
            E VR  +V  A S   EGKA AGTLAEF+EAQARWGR+ISTEE E M EEAS+AKTAR+V
Sbjct: 513  ERVRSNSVEAAPSGEDEGKALAGTLAEFYEAQARWGRDISTEEREKMIEEASKAKTARLV 572

Query: 1662 RKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFMFRRVGLRMKAYLP 1841
            ++ EH                   E +MVP+GP  DQETI++EER MFRRVGLRMKAYLP
Sbjct: 573  KRTEHKLAIAQAKKLRAESLLSKIETTMVPSGPDFDQETISEEERVMFRRVGLRMKAYLP 632

Query: 1842 LGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYESGGILVAIERVPKG 2021
            LGIRGVFDGVIENMHLHWKHRELVKLISKQKTL+F++DTA+LLEYESGG+LVAIERVPKG
Sbjct: 633  LGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEDTAKLLEYESGGVLVAIERVPKG 692

Query: 2022 YALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEGMKSEI 2198
            +ALIYYRGKNY+RPISIRPRNLLTKAKALKRSVAMQRHEALSQHI ELE+ IE M  E+
Sbjct: 693  FALIYYRGKNYRRPISIRPRNLLTKAKALKRSVAMQRHEALSQHIFELEKNIEEMVKEM 751


>ref|XP_006842297.1| hypothetical protein AMTR_s00079p00107040 [Amborella trichopoda]
            gi|548844363|gb|ERN03972.1| hypothetical protein
            AMTR_s00079p00107040 [Amborella trichopoda]
          Length = 826

 Score =  797 bits (2059), Expect = 0.0
 Identities = 438/738 (59%), Positives = 509/738 (68%), Gaps = 20/738 (2%)
 Frame = +3

Query: 60   SNTLRNTRRGNYSSSKS---------RAPSAPWLNKWPSEEKNDDSEKRDRAE-DRVESR 209
            S+T RN +     S  S         + P + WLNKW   + + +   R  +E DRV+  
Sbjct: 37   SSTTRNPKNPPIQSRTSSNPNPKPFPKNPPSSWLNKWTQSDPSSNPNSRTSSEEDRVQ-- 94

Query: 210  YFDGDKGRSAIERIVFRLRNLGIASXXXXXXXXXXXXXXXXXXXXAEMPCTGEERLGDLL 389
            YFDGDKGRSAI RIV RLRNLG++                      E     ++ LG LL
Sbjct: 95   YFDGDKGRSAIHRIVDRLRNLGLSDGDGDDDSKDLPWGSR------EKGNLDDKDLGFLL 148

Query: 390  QRTWSRPDSVVLDCEDDDRMLLPWXXXXXXXXXXXXXXLKKRRVKAPSLAELTLEDVXXX 569
            Q+TW RPD VV      D  LLPW               K RR+KAP+LAELT+ED    
Sbjct: 149  QKTWERPDQVVNGDRISDA-LLPWERSEEGEYETKKE--KSRRIKAPTLAELTIEDSELR 205

Query: 570  XXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETLARDMKKAHEIVERR 749
                        IN+PKAGVTQ +LEKIH  WRK+ELVRLKFHETL  DMK AHEIVERR
Sbjct: 206  RLRKLGITLRERINVPKAGVTQAVLEKIHMAWRKSELVRLKFHETLVHDMKTAHEIVERR 265

Query: 750  TGGLVIWRSGSVMVVYRGSNY-ERPSLRTQS-------VSMVVDGP--FVPNVSFADHLA 899
            TGGLVIW SGSVMVVYRGS Y ++PS R  +        ++V +G   FVP+V+ ++ + 
Sbjct: 266  TGGLVIWMSGSVMVVYRGSTYGQQPSSRPNTSEEEVIATNLVHEGDTLFVPDVAHSEKIP 325

Query: 900  AEDDKISSSIPEKNQRTFQNQDPXXXXXXXXXXFNSLLDGLGPRFLDWWGTGLLPVDADM 1079
                K S    EK   +  + D           +NS+LDGLGPRF++WWGTG LPVDAD+
Sbjct: 326  ESARKNSIITAEKP--SLFSVDEVPTLTEEEKEYNSILDGLGPRFVEWWGTGFLPVDADL 383

Query: 1080 LPAFVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASAIVKV 1259
            LP  VPGYK PFRLLP GMRSRLTNAEMTNLRK ++ LP HFALGRNRNHQG+A+AI+K+
Sbjct: 384  LPQKVPGYKPPFRLLPIGMRSRLTNAEMTNLRKFARKLPSHFALGRNRNHQGMAAAIIKL 443

Query: 1260 WEKSLVVKIAVKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIIIYRGKDFLPTSVAAAL 1439
            WE+SL+VKIAVKRGIQNTNNKLMA             RNKYYI+IYRGKDFLP SVA+AL
Sbjct: 444  WERSLIVKIAVKRGIQNTNNKLMAEELKKLTGGILLLRNKYYIVIYRGKDFLPPSVASAL 503

Query: 1440 AERQELTKKVQDVEEEVRIGAVGIATSEGFEGKAAAGTLAEFHEAQARWGREISTEEHEN 1619
            AERQ LTK +QD EE  R GA+G A +E  + +  AGTLAEF EAQARWGREI+ EE E 
Sbjct: 504  AERQALTKNIQDEEERARKGAIGAAEAELEKQEVLAGTLAEFKEAQARWGREIAAEEQEK 563

Query: 1620 MQEEASRAKTARIVRKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERF 1799
            M+EE S+AK A +VR+IEH                   E SMVP GPSDDQET+TDEER+
Sbjct: 564  MKEEISKAKHAGLVRRIEHKFAVAQAKKLRAEKQLSKIEASMVPVGPSDDQETVTDEERY 623

Query: 1800 MFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYE 1979
            MFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTL+F+++TARLLEYE
Sbjct: 624  MFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFVEETARLLEYE 683

Query: 1980 SGGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHIS 2159
            SGGIL+AIERVPKGYALIYYRGKNYQRP++IRPRNLLTKAKALKRSV MQRHEALSQHI 
Sbjct: 684  SGGILIAIERVPKGYALIYYRGKNYQRPVTIRPRNLLTKAKALKRSVEMQRHEALSQHIL 743

Query: 2160 ELERTIEGMKSEINEDDL 2213
            ELERTIE MK E++  ++
Sbjct: 744  ELERTIEHMKLELHNPEI 761


>ref|XP_002883129.1| EMB1865 [Arabidopsis lyrata subsp. lyrata]
            gi|297328969|gb|EFH59388.1| EMB1865 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 846

 Score =  796 bits (2057), Expect = 0.0
 Identities = 429/752 (57%), Positives = 513/752 (68%), Gaps = 32/752 (4%)
 Frame = +3

Query: 66   TLRNTRRGNYSSSKSRA-------PSAPWLNKWPSEE-------------KNDDSEKRDR 185
            +LR + R N  S+ +R        P+ PW++KWP                +N+  +K   
Sbjct: 54   SLRTSERSNNRSNNNRRVDQRNHKPTPPWIDKWPPSSAGVGGDHAGKRGGENNGGDKIRS 113

Query: 186  AEDRVES--RYFDGDKGRSAIERIVFRLRNLGIASXXXXXXXXXXXXXXXXXXXXAEMPC 359
            AE+  E+  RY + DKG++AIERIV RLRNLG+ S                       P 
Sbjct: 114  AEEEAEAKLRYLERDKGQNAIERIVLRLRNLGLGSDDEEDVEDEEGGGINGGDVK---PV 170

Query: 360  TGEERLGDLLQRTWSRPDSVVLD---CEDDDRMLLPWXXXXXXXXXXXXXX------LKK 512
            TGEERLGDLL+R W RPD ++ +    E++D +LLPW                    +KK
Sbjct: 171  TGEERLGDLLKREWVRPDMMLAEGEESEEEDEVLLPWEKNEEEQAAERVEGEGGVAVMKK 230

Query: 513  RRVKAPSLAELTLEDVXXXXXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLK 692
             R +APSLAELT+ED                INIPKAG+TQ ++EKI+D WRK ELVRLK
Sbjct: 231  GRARAPSLAELTVEDSELRRLRRDGMYLRVRINIPKAGLTQAVMEKIYDTWRKEELVRLK 290

Query: 693  FHETLARDMKKAHEIVERRTGGLVIWRSGSVMVVYRGSNYERPSLRTQSVSMVVDGPFVP 872
            FHE LARDMK AHEIVERRTGG+VIWR+GSVMVVYRG +Y+ P + +  ++   +  FVP
Sbjct: 291  FHEVLARDMKTAHEIVERRTGGMVIWRAGSVMVVYRGLDYKGPPVISNQMAGPKETLFVP 350

Query: 873  NVSFADHLAAEDDKISSSIPEKNQRTFQNQDPXXXXXXXXXXFNSLLDGLGPRFLDWWGT 1052
            +VS A   A       S   E      +N             FNSLLD LGPRF +WWGT
Sbjct: 351  DVSSAGDEATNAKDNQSPPSEIKDPIIKNPIRKENMTEEEAEFNSLLDSLGPRFQEWWGT 410

Query: 1053 GLLPVDADMLPAFVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQ 1232
            G+LPVDAD+LP  +PGYKTPFRLLPTGMRS LTNAEMTNLRK+ K+LPCHFALGRNRNHQ
Sbjct: 411  GVLPVDADLLPPTIPGYKTPFRLLPTGMRSNLTNAEMTNLRKIGKTLPCHFALGRNRNHQ 470

Query: 1233 GLASAIVKVWEKSLVVKIAVKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIIIYRGKDF 1412
            GLA+AI+++WEKSL+ KIAVKRGIQNTNNKLMA             RNKYYI+IYRGKDF
Sbjct: 471  GLAAAILQIWEKSLIAKIAVKRGIQNTNNKLMADEVKALTGGVLLLRNKYYIVIYRGKDF 530

Query: 1413 LPTSVAAALAERQELTKKVQDVEEEVRIGAVGIATSEGFEGKAAAGTLAEFHEAQARWGR 1592
            LP+SVAA LAERQELTK++QDVEE VR   +      G +  A AGTLAEF+EAQARWG+
Sbjct: 531  LPSSVAATLAERQELTKEIQDVEERVRNREIEAVQPVGDKVPAEAGTLAEFYEAQARWGK 590

Query: 1593 EISTEEHENMQEEASRAKTARIVRKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQ 1772
            EI+ +  E M EEASR   AR+V++I+H                   E SM+P GP  DQ
Sbjct: 591  EITPDHREKMIEEASRVANARVVKRIQHKLNLAQSKFQRAEKLLSKIEASMIPNGPDYDQ 650

Query: 1773 ETITDEERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQ 1952
            E I++EER MFR+VGL+MKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQK L+F++
Sbjct: 651  EVISEEERAMFRKVGLKMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKNLAFVE 710

Query: 1953 DTARLLEYESGGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQR 2132
            DTARLLEYESGG+LVAIE+VPKG+ALIYYRGKNY+RPIS+RPRNLLTKAKALKRS+AMQR
Sbjct: 711  DTARLLEYESGGVLVAIEKVPKGFALIYYRGKNYRRPISLRPRNLLTKAKALKRSIAMQR 770

Query: 2133 HEALSQHISELERTIEGMKSEI-NEDDLYRES 2225
            HEALSQHISELERTIE M+SE+ ++   Y ES
Sbjct: 771  HEALSQHISELERTIEQMQSELTSKTPSYSES 802


>ref|XP_006485796.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Citrus sinensis]
          Length = 837

 Score =  795 bits (2053), Expect = 0.0
 Identities = 431/732 (58%), Positives = 513/732 (70%), Gaps = 18/732 (2%)
 Frame = +3

Query: 57   RSNTLRNTRRGNYSSSKSRAPS--APWLNKW-----PSEEKNDDSEKRDRAEDRVES--- 206
            R+N    T   N    K R PS  APWLN W     PS E  + S+ R++ +++  +   
Sbjct: 52   RTNQNPRTDSQNQKFPKPRFPSTSAPWLNNWSRPKPPSTENVNKSDGRNQIDEKQTAPDS 111

Query: 207  --RYFDGD-KGRSAIERIVFRLRNLGIASXXXXXXXXXXXXXXXXXXXXAEMPCTGEERL 377
              RY D D KGR+AIERIV RLRNLG+ S                         TGEERL
Sbjct: 112  YPRYSDSDNKGRNAIERIVLRLRNLGLGSDDEEEGEEEEDDINGA--------ATGEERL 163

Query: 378  GDLLQRTWSRPDSVVLDCE-DDDRMLLPWXXXXXXXXXXXXXX----LKKRRVKAPSLAE 542
             DLL+R W RP++V+ + E ++D  LLPW                   ++RR+KAP+LAE
Sbjct: 164  EDLLRREWVRPNTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAE 223

Query: 543  LTLEDVXXXXXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETLARDMK 722
            LT+ED                IN+PKAG+TQ ++ KIHDKWRK ELVRLKFHE LA DMK
Sbjct: 224  LTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMK 283

Query: 723  KAHEIVERRTGGLVIWRSGSVMVVYRGSNYERPSLRTQSVSMVVDGPFVPNVSFADHLAA 902
             AHEIVERRTGGLVIWR+GSVMVVY+GSNY  PS + Q +    DG    +  F  H+++
Sbjct: 284  TAHEIVERRTGGLVIWRAGSVMVVYQGSNYAGPSSKPQPLDGDGDGD--GDTLFVPHVSS 341

Query: 903  EDDKISSSIPEKNQRTFQNQDPXXXXXXXXXXFNSLLDGLGPRFLDWWGTGLLPVDADML 1082
             D   + S+ EK++   +  D            NSLLD LGPRF +WWGTG+LPVDAD+L
Sbjct: 342  TDGSTARSVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLL 401

Query: 1083 PAFVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVW 1262
            P  V GYKTPFRLLPTGMRSRLTNAEMT+LR+L++SLPCHFALGRNRNHQGLA AI+K+W
Sbjct: 402  PPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLW 461

Query: 1263 EKSLVVKIAVKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIIIYRGKDFLPTSVAAALA 1442
            EKSLV KIAVKRGIQNTNNKLMA             RNK+YI++YRGKDFLP +VA+ALA
Sbjct: 462  EKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALA 521

Query: 1443 ERQELTKKVQDVEEEVRIGAVGIATSEGFEGKAAAGTLAEFHEAQARWGREISTEEHENM 1622
            ER++  K++QDVEE+VR   +    S   EG+A AGTLAEF+EAQ RWGRE+S EE E M
Sbjct: 522  EREQCAKQIQDVEEKVRSKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKM 581

Query: 1623 QEEASRAKTARIVRKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFM 1802
             EEAS+AK AR+V++IEH                   E SMVP+GP  DQETITDEER M
Sbjct: 582  VEEASKAKHARLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAM 641

Query: 1803 FRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYES 1982
            FRRVGLRMKA+LPLGIRGVFDGV+ENMHLHWK+RELVKLI+KQKTL++++DTARLLEYES
Sbjct: 642  FRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYES 701

Query: 1983 GGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISE 2162
            GGIL+AIERVPKG+ALI+YRGKNY+RPIS+RPRNLLTKAKALKRSVAMQRHEALSQHIS+
Sbjct: 702  GGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISD 761

Query: 2163 LERTIEGMKSEI 2198
            LE TIE MK EI
Sbjct: 762  LENTIEQMKKEI 773


>ref|XP_006341605.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum tuberosum]
          Length = 824

 Score =  795 bits (2053), Expect = 0.0
 Identities = 426/723 (58%), Positives = 502/723 (69%), Gaps = 3/723 (0%)
 Frame = +3

Query: 39   NTQQKGRSNTLRNTRRGNYSSSKSRAPSAPWLNKWPSEEKNDDSEKRDRA-EDRVESRYF 215
            N  +K      R++   +     + + S+ WLNKWP+           R  E + E+RYF
Sbjct: 44   NIPRKDNRKPYRDSNSSSTPVKSNNSRSSTWLNKWPNTSPPVKHSSNSRTVESKTETRYF 103

Query: 216  DGDK--GRSAIERIVFRLRNLGIASXXXXXXXXXXXXXXXXXXXXAEMPCTGEERLGDLL 389
            D +   G +AI+RIV RLRNLG+ S                           EE+LGDLL
Sbjct: 104  DENTRVGTTAIDRIVLRLRNLGLGSDDEGEGEDEEEGNLKLDSSSTMQVNGEEEKLGDLL 163

Query: 390  QRTWSRPDSVVLDCEDDDRMLLPWXXXXXXXXXXXXXXLKKRRVKAPSLAELTLEDVXXX 569
            +R W RPD ++ + +D+    LPW                KR VKAPSLAELT+ED    
Sbjct: 164  KRDWVRPDMILEESDDEGDTYLPWERSVEEEAVEVQRG-GKRTVKAPSLAELTIEDEELR 222

Query: 570  XXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETLARDMKKAHEIVERR 749
                        IN+PKAGVT  +LEKIH  WRK ELVRLKFHE LA DM+  HEIVERR
Sbjct: 223  RLRRMGMTLRERINVPKAGVTGAVLEKIHHSWRKNELVRLKFHEVLAHDMRTGHEIVERR 282

Query: 750  TGGLVIWRSGSVMVVYRGSNYERPSLRTQSVSMVVDGPFVPNVSFADHLAAEDDKISSSI 929
            T GLVIWR+GSVMVVYRGSNYE PS R+QSV+   +  FVP+VS +D    +D+K  + +
Sbjct: 283  TRGLVIWRAGSVMVVYRGSNYEGPSSRSQSVNEEDNALFVPDVS-SDKSITKDNKSFNPV 341

Query: 930  PEKNQRTFQNQDPXXXXXXXXXXFNSLLDGLGPRFLDWWGTGLLPVDADMLPAFVPGYKT 1109
             E   +   N             FN +LDGLGPRF DWWGTG+LPVDAD+LP  +PGYKT
Sbjct: 342  IENRNQVHPNS--VQSMTVEESEFNRVLDGLGPRFEDWWGTGVLPVDADLLPQTIPGYKT 399

Query: 1110 PFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVWEKSLVVKIA 1289
            PFRLLPTGMRSRLTNAEMTNLRK++KSLPCHFALGRNRNHQGLA+AIVK+WEKSLVVKIA
Sbjct: 400  PFRLLPTGMRSRLTNAEMTNLRKIAKSLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIA 459

Query: 1290 VKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIIIYRGKDFLPTSVAAALAERQELTKKV 1469
            VKRGIQNTNNKLM+             RNKYYII YRGKDF+P +VAA LAERQELTK++
Sbjct: 460  VKRGIQNTNNKLMSEELKMLTGGVLLLRNKYYIIFYRGKDFVPPTVAAVLAERQELTKQI 519

Query: 1470 QDVEEEVRIGAVGIATSEGFEGKAAAGTLAEFHEAQARWGREISTEEHENMQEEASRAKT 1649
            QDVEE+ R G   +A     +G+A AG+LAEF+EAQARWGREIS EE E M +EA+ AKT
Sbjct: 520  QDVEEQTRSGPAKVAPLT-TDGQAVAGSLAEFYEAQARWGREISAEERERMLKEAAMAKT 578

Query: 1650 ARIVRKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFMFRRVGLRMK 1829
            AR+V+++EH                     S +PAGPSDD ETIT+EER M RRVGLRMK
Sbjct: 579  ARVVKRLEHKFEISQTKKLKAEKILAKIVESWIPAGPSDDLETITEEERVMLRRVGLRMK 638

Query: 1830 AYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYESGGILVAIER 2009
            +YLPLGIRGVFDGVIENMHLHWKHRELVKLISK+K L+F+++TARLLEYESGGILVAIER
Sbjct: 639  SYLPLGIRGVFDGVIENMHLHWKHRELVKLISKEKVLAFVEETARLLEYESGGILVAIER 698

Query: 2010 VPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEGMK 2189
            VPKGYALI+YRGKNY+RPIS+RPRNLLTKAKALKR VA+QR+EALSQHI+ELE TIE  K
Sbjct: 699  VPKGYALIFYRGKNYRRPISLRPRNLLTKAKALKRRVALQRYEALSQHIAELETTIEQTK 758

Query: 2190 SEI 2198
            S+I
Sbjct: 759  SKI 761


>ref|XP_003533366.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Glycine max]
          Length = 791

 Score =  794 bits (2051), Expect = 0.0
 Identities = 423/700 (60%), Positives = 501/700 (71%), Gaps = 6/700 (0%)
 Frame = +3

Query: 117  PSAPWLNKWPSEEKN-DDSEKRDRAEDRVESRYFDGDKGRSAIERIVFRLRNLGIASXXX 293
            PSAPWL K PS ++  +     D   DR         K ++A++RIV RLRNLG+ S   
Sbjct: 48   PSAPWLTKSPSPKRAVEPLPAGDPTPDR---------KPQNAVDRIVLRLRNLGLPSEEE 98

Query: 294  XXXXXXXXXXXXXXXXXAEMPCTGEERLGDLLQRTWSRPDSVVLDCEDDDR--MLLPWXX 467
                                P TGEERLG+LLQR W RPD+V++  +DD+   M+LPW  
Sbjct: 99   EQEQEHEEEIPATNPA----PVTGEERLGELLQREWVRPDAVLVGEDDDEEEEMMLPWER 154

Query: 468  XXXXXXXXXXXX---LKKRRVKAPSLAELTLEDVXXXXXXXXXXXXXXXINIPKAGVTQV 638
                           LKKRRV+APSLA+LTLED                +++PKAG+T+ 
Sbjct: 155  DEEEKEVVVVSEEGLLKKRRVRAPSLADLTLEDELLRRLRREGMRVRERVSVPKAGLTEE 214

Query: 639  ILEKIHDKWRKAELVRLKFHETLARDMKKAHEIVERRTGGLVIWRSGSVMVVYRGSNYER 818
            ++EKIH +WRK ELVRLKFHE LA+DM+KAHEIVERRTGGLV WRSGSVM+VYRG +Y+ 
Sbjct: 215  VMEKIHKRWRKEELVRLKFHEELAKDMRKAHEIVERRTGGLVTWRSGSVMMVYRGIDYQG 274

Query: 819  PSLRTQSVSMVVDGPFVPNVSFADHLAAEDDKISSSIPEKNQRTFQNQDPXXXXXXXXXX 998
            P  R +      DG FVP+VS        +D  ++S  EK++   + ++           
Sbjct: 275  PDSRKELNEKKGDGFFVPDVS------KREDSTATSTSEKSEVVVREREHPENMSEAEAE 328

Query: 999  FNSLLDGLGPRFLDWWGTGLLPVDADMLPAFVPGYKTPFRLLPTGMRSRLTNAEMTNLRK 1178
            +N+LLDGLGPRF  WWGTG+LPVDAD+LP  VPGYKTPFRLLPTGMRSRLTNAEMTNLRK
Sbjct: 329  YNALLDGLGPRFFGWWGTGILPVDADLLPRTVPGYKTPFRLLPTGMRSRLTNAEMTNLRK 388

Query: 1179 LSKSLPCHFALGRNRNHQGLASAIVKVWEKSLVVKIAVKRGIQNTNNKLMAXXXXXXXXX 1358
            L+KSLPCHFA+GRNRNHQGLA AI+K+WEKSLV KIAVKRGIQNTNN+LMA         
Sbjct: 389  LAKSLPCHFAVGRNRNHQGLACAILKLWEKSLVSKIAVKRGIQNTNNELMAEELKMLTGG 448

Query: 1359 XXXXRNKYYIIIYRGKDFLPTSVAAALAERQELTKKVQDVEEEVRIGAVGIATSEGFEGK 1538
                RNKY+I+IYRGKDF+PTSVAA LAER+ELTK+VQDVE++VR  AV    S   E  
Sbjct: 449  TLLLRNKYFIVIYRGKDFVPTSVAAVLAEREELTKQVQDVEDKVRCRAVDAIPSGQGEAT 508

Query: 1539 AAAGTLAEFHEAQARWGREISTEEHENMQEEASRAKTARIVRKIEHXXXXXXXXXXXXXX 1718
            A AGTLAEF+EAQARWGREIS +E E M EEA++AKTA++VR+IEH              
Sbjct: 509  AQAGTLAEFYEAQARWGREISPDEREKMMEEAAKAKTAKLVRQIEHKIFIAQTKKLRAEK 568

Query: 1719 XXXXXEVSMVPAGPSDDQETITDEERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWK 1898
                 E SMVPAGP  DQETITDEER MFR+VGLRMK YLPLGIRGVFDGV+ENMHLHWK
Sbjct: 569  LLAKIEASMVPAGPDYDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVVENMHLHWK 628

Query: 1899 HRELVKLISKQKTLSFLQDTARLLEYESGGILVAIERVPKGYALIYYRGKNYQRPISIRP 2078
            HRELVKL++KQKTL+F++DTARLLEYESGGILVAIE+V K +ALIYYRGKNY+RPI++RP
Sbjct: 629  HRELVKLMTKQKTLAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRGKNYKRPITLRP 688

Query: 2079 RNLLTKAKALKRSVAMQRHEALSQHISELERTIEGMKSEI 2198
            RNLLTK KALKR VAMQRHEALSQHI+ELE+TIE MK E+
Sbjct: 689  RNLLTKGKALKRHVAMQRHEALSQHITELEKTIEQMKKEL 728


>ref|XP_006406610.1| hypothetical protein EUTSA_v10020034mg [Eutrema salsugineum]
            gi|557107756|gb|ESQ48063.1| hypothetical protein
            EUTSA_v10020034mg [Eutrema salsugineum]
          Length = 874

 Score =  793 bits (2048), Expect = 0.0
 Identities = 434/780 (55%), Positives = 521/780 (66%), Gaps = 52/780 (6%)
 Frame = +3

Query: 42   TQQKGRSNTLRNTRRGNYSSSKSRAPSAPWLNKWPSE-------------EKNDDSEKRD 182
            T ++  +N   N RR +   SK   P+ PW++KWP               E+N   + R 
Sbjct: 56   TSERSSNNRSHNNRRLDQRHSK---PTPPWIDKWPPSSAGAGDHSGKKVAEQNGGGKIRS 112

Query: 183  RAED-RVESRYFDGDKGRSAIERIVFRLRNLGIASXXXXXXXXXXXXXXXXXXXXAEMPC 359
              E+   + RY + DKG SAIERIV RLRNLG+AS                       P 
Sbjct: 113  AEEEAEAKRRYLEKDKGHSAIERIVLRLRNLGLASDDEDDVEDNEGDGINGGDVK---PV 169

Query: 360  TGEERLGDLLQRTWSRPDSVVLDCED----DDRMLLPWXXXXXXXXXXXXXX----LKKR 515
            TGEERLGDLL+R W RPD ++ + E+    DD +LLPW                  +KKR
Sbjct: 170  TGEERLGDLLKREWVRPDMMLAEGEEESDEDDDVLLPWEKNEEEQAAERMEGDGAAVKKR 229

Query: 516  RVKAPSLAELTLEDVXXXXXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKF 695
            R +APSLAELT+ED                I+IPKAG+TQ ++EKIHD WRK ELVRLKF
Sbjct: 230  RARAPSLAELTVEDSELRRLRRDGMYLRVRISIPKAGLTQAVMEKIHDTWRKEELVRLKF 289

Query: 696  HETLARDMKKAHEIVERRTGGLVIWRSGSVMVVYRGSNYERPSLRTQSVSMVVDGPFVPN 875
            HE LARDM+ AHEIVERRTGG+VIWR+GSVMVVYRG +Y+ PS+ +  ++   +  FVP+
Sbjct: 290  HEVLARDMRTAHEIVERRTGGMVIWRAGSVMVVYRGRDYQGPSMISNQMARPEETLFVPD 349

Query: 876  VSFADHLAAEDDKISSSIPEKNQRTFQNQDPXXXXXXXXXXFNSLLDGLGPRFLDWWGTG 1055
            VS A   A       S+ PE      +N             FNSLLD LGPRF +WWGTG
Sbjct: 350  VSSAGDEATGSKDNQSAPPEIKDPIVRNPIRKETMTEEEAEFNSLLDSLGPRFHEWWGTG 409

Query: 1056 LLPVDADMLPAFVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQG 1235
            +LPV+AD+LP  +PGYKTPFRLLPTGMRS LTNAEMTNLRK+ K+LPCHFALGRNRNHQG
Sbjct: 410  VLPVNADLLPPTIPGYKTPFRLLPTGMRSNLTNAEMTNLRKIGKTLPCHFALGRNRNHQG 469

Query: 1236 LASAIVKVWEKSLVVKIAVKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIIIYRGKDFL 1415
            LA+AI+K+WEKSL+ KIAVKRGIQNTNNKLMA             RNKYYI+IYRGKDFL
Sbjct: 470  LAAAILKLWEKSLIAKIAVKRGIQNTNNKLMADEIKTLTGGVLLLRNKYYIVIYRGKDFL 529

Query: 1416 PTSVAAALAERQELTKKVQDVEEEVRIGAV---------------------------GIA 1514
            P+SVAA LAERQELTK++QDVEE VR   +                            I 
Sbjct: 530  PSSVAATLAERQELTKEIQDVEERVRTRDIETSQPVGDTVPAEAGTLADIEERVNNRDIE 589

Query: 1515 TSE--GFEGKAAAGTLAEFHEAQARWGREISTEEHENMQEEASRAKTARIVRKIEHXXXX 1688
             S+  G +  A AGTLAEF+EAQARWG+EI+ +  E M EEASR  +AR+V++I+H    
Sbjct: 590  ASQPVGDKVPAEAGTLAEFYEAQARWGKEITPDHREKMIEEASRVASARVVKRIQHKLNL 649

Query: 1689 XXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFMFRRVGLRMKAYLPLGIRGVFDG 1868
                           E SM+P GP  DQE I++EER MFR+VGL+MK+YLPLGIRGVFDG
Sbjct: 650  AQSKFHRAEKLLSKIEASMIPNGPDYDQEVISEEERIMFRKVGLKMKSYLPLGIRGVFDG 709

Query: 1869 VIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYESGGILVAIERVPKGYALIYYRGK 2048
            VIENMHLHWKHRELVKLISKQK+L+F++DTARLLEYESGG+LVAIE+VPKG+ALIYYRGK
Sbjct: 710  VIENMHLHWKHRELVKLISKQKSLAFVEDTARLLEYESGGVLVAIEKVPKGFALIYYRGK 769

Query: 2049 NYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEGMKSEIN-EDDLYRES 2225
            NYQRPIS+RPRNLLTKAKALKRS+AMQRHEALSQHISELE+TIE M++E+  ++  Y ES
Sbjct: 770  NYQRPISLRPRNLLTKAKALKRSIAMQRHEALSQHISELEKTIEQMQNELTAKNPSYSES 829


>ref|XP_006440981.1| hypothetical protein CICLE_v10018859mg [Citrus clementina]
            gi|557543243|gb|ESR54221.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
          Length = 806

 Score =  791 bits (2044), Expect = 0.0
 Identities = 431/732 (58%), Positives = 510/732 (69%), Gaps = 18/732 (2%)
 Frame = +3

Query: 57   RSNTLRNTRRGNYSSSKSRAPS--APWLNKW-----PSEEKNDDSEKRDRAEDRVES--- 206
            R+N    T   N    K R+PS  APWLN W     PS E  +    R++ +++  S   
Sbjct: 52   RTNQNPRTDSQNQQFPKPRSPSTSAPWLNNWSRPKPPSTENANKLGGRNQIDEKQTSPDS 111

Query: 207  --RYFDGD-KGRSAIERIVFRLRNLGIASXXXXXXXXXXXXXXXXXXXXAEMPCTGEERL 377
              RY D D KGR+AIERIV RLRNLG+ S                         TGEERL
Sbjct: 112  YPRYSDSDNKGRNAIERIVLRLRNLGLGSDDEEEGEEEEDDINDA--------ATGEERL 163

Query: 378  GDLLQRTWSRPDSVVLDCE-DDDRMLLPWXXXXXXXXXXXXXX----LKKRRVKAPSLAE 542
             DLL+R W RP++V+ + E ++D  LLPW                   ++RR+KAP+LAE
Sbjct: 164  EDLLRREWVRPNTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAE 223

Query: 543  LTLEDVXXXXXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETLARDMK 722
            LT+ED                IN+PKAG+TQ ++ KIHDKWRK ELVRLKFHE LA DMK
Sbjct: 224  LTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMK 283

Query: 723  KAHEIVERRTGGLVIWRSGSVMVVYRGSNYERPSLRTQSVSMVVDGPFVPNVSFADHLAA 902
             AHEIVERRTGGLVIWR+GSVMVVYRGSNY  PS + Q +    D  FVP      H+++
Sbjct: 284  TAHEIVERRTGGLVIWRAGSVMVVYRGSNYAGPSSKPQPIDGDGDTLFVP------HVSS 337

Query: 903  EDDKISSSIPEKNQRTFQNQDPXXXXXXXXXXFNSLLDGLGPRFLDWWGTGLLPVDADML 1082
             D   + S+ EK++   +  D            NSLLD LGPRF +WWGTG+LPVDAD+L
Sbjct: 338  TDGSTARSVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLL 397

Query: 1083 PAFVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVW 1262
            P  V GYKTPFRLLPTGMRSRLTNAEMT+LR+L++SLPCHFALGRNRNHQGLA AI+K+W
Sbjct: 398  PPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLW 457

Query: 1263 EKSLVVKIAVKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIIIYRGKDFLPTSVAAALA 1442
            EKSLV KIAVKRGIQNTNNKLMA             RNK+YI++YRGKDFLP +VA+ALA
Sbjct: 458  EKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALA 517

Query: 1443 ERQELTKKVQDVEEEVRIGAVGIATSEGFEGKAAAGTLAEFHEAQARWGREISTEEHENM 1622
            ER++  K++QDVEE+VR   +    S   EG+A AGTLAEF+EAQ RWGRE+S EE E M
Sbjct: 518  EREQCAKQIQDVEEKVRSKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKM 577

Query: 1623 QEEASRAKTARIVRKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFM 1802
             EEAS+AK  R+V++IEH                   E SMVP+GP  DQETITDEER M
Sbjct: 578  VEEASKAKHGRLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAM 637

Query: 1803 FRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYES 1982
            FRRVGLRMKA+LPLGIRGVFDGV+ENMHLHWK+RELVKLI+KQKTL++++DTARLLEYES
Sbjct: 638  FRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYES 697

Query: 1983 GGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISE 2162
             GIL+AIERVPKG+ALI+YRGKNY+RPIS+RPRNLLTKAKALKRSVAMQRHEALSQHIS+
Sbjct: 698  VGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISD 757

Query: 2163 LERTIEGMKSEI 2198
            LE TIE MK EI
Sbjct: 758  LENTIEQMKKEI 769


>ref|XP_006440978.1| hypothetical protein CICLE_v10018859mg [Citrus clementina]
            gi|567896982|ref|XP_006440979.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
            gi|567896984|ref|XP_006440980.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
            gi|557543240|gb|ESR54218.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
            gi|557543241|gb|ESR54219.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
            gi|557543242|gb|ESR54220.1| hypothetical protein
            CICLE_v10018859mg [Citrus clementina]
          Length = 833

 Score =  791 bits (2044), Expect = 0.0
 Identities = 431/732 (58%), Positives = 510/732 (69%), Gaps = 18/732 (2%)
 Frame = +3

Query: 57   RSNTLRNTRRGNYSSSKSRAPS--APWLNKW-----PSEEKNDDSEKRDRAEDRVES--- 206
            R+N    T   N    K R+PS  APWLN W     PS E  +    R++ +++  S   
Sbjct: 52   RTNQNPRTDSQNQQFPKPRSPSTSAPWLNNWSRPKPPSTENANKLGGRNQIDEKQTSPDS 111

Query: 207  --RYFDGD-KGRSAIERIVFRLRNLGIASXXXXXXXXXXXXXXXXXXXXAEMPCTGEERL 377
              RY D D KGR+AIERIV RLRNLG+ S                         TGEERL
Sbjct: 112  YPRYSDSDNKGRNAIERIVLRLRNLGLGSDDEEEGEEEEDDINDA--------ATGEERL 163

Query: 378  GDLLQRTWSRPDSVVLDCE-DDDRMLLPWXXXXXXXXXXXXXX----LKKRRVKAPSLAE 542
             DLL+R W RP++V+ + E ++D  LLPW                   ++RR+KAP+LAE
Sbjct: 164  EDLLRREWVRPNTVLREVEGEEDDSLLPWEREEEENLRAGGEKPAGETRRRRMKAPTLAE 223

Query: 543  LTLEDVXXXXXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETLARDMK 722
            LT+ED                IN+PKAG+TQ ++ KIHDKWRK ELVRLKFHE LA DMK
Sbjct: 224  LTIEDEELRRLRRNGMYLRERINVPKAGLTQDVMRKIHDKWRKDELVRLKFHEVLATDMK 283

Query: 723  KAHEIVERRTGGLVIWRSGSVMVVYRGSNYERPSLRTQSVSMVVDGPFVPNVSFADHLAA 902
             AHEIVERRTGGLVIWR+GSVMVVYRGSNY  PS + Q +    D  FVP      H+++
Sbjct: 284  TAHEIVERRTGGLVIWRAGSVMVVYRGSNYAGPSSKPQPIDGDGDTLFVP------HVSS 337

Query: 903  EDDKISSSIPEKNQRTFQNQDPXXXXXXXXXXFNSLLDGLGPRFLDWWGTGLLPVDADML 1082
             D   + S+ EK++   +  D            NSLLD LGPRF +WWGTG+LPVDAD+L
Sbjct: 338  TDGSTARSVDEKSEVPVRILDHSKPMTEEEAECNSLLDSLGPRFQEWWGTGILPVDADLL 397

Query: 1083 PAFVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVW 1262
            P  V GYKTPFRLLPTGMRSRLTNAEMT+LR+L++SLPCHFALGRNRNHQGLA AI+K+W
Sbjct: 398  PPKVDGYKTPFRLLPTGMRSRLTNAEMTDLRRLARSLPCHFALGRNRNHQGLAVAILKLW 457

Query: 1263 EKSLVVKIAVKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIIIYRGKDFLPTSVAAALA 1442
            EKSLV KIAVKRGIQNTNNKLMA             RNK+YI++YRGKDFLP +VA+ALA
Sbjct: 458  EKSLVAKIAVKRGIQNTNNKLMAEELKSLTGGTLLQRNKFYIVLYRGKDFLPPNVASALA 517

Query: 1443 ERQELTKKVQDVEEEVRIGAVGIATSEGFEGKAAAGTLAEFHEAQARWGREISTEEHENM 1622
            ER++  K++QDVEE+VR   +    S   EG+A AGTLAEF+EAQ RWGRE+S EE E M
Sbjct: 518  EREQCAKQIQDVEEKVRSKTLEATPSGETEGQAPAGTLAEFYEAQKRWGREVSAEEREKM 577

Query: 1623 QEEASRAKTARIVRKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFM 1802
             EEAS+AK  R+V++IEH                   E SMVP+GP  DQETITDEER M
Sbjct: 578  VEEASKAKHGRLVKRIEHKLAVSQAKKLRAERLLAKIEASMVPSGPDYDQETITDEERAM 637

Query: 1803 FRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYES 1982
            FRRVGLRMKA+LPLGIRGVFDGV+ENMHLHWK+RELVKLI+KQKTL++++DTARLLEYES
Sbjct: 638  FRRVGLRMKAFLPLGIRGVFDGVVENMHLHWKYRELVKLITKQKTLAYVEDTARLLEYES 697

Query: 1983 GGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISE 2162
             GIL+AIERVPKG+ALI+YRGKNY+RPIS+RPRNLLTKAKALKRSVAMQRHEALSQHIS+
Sbjct: 698  VGILIAIERVPKGFALIFYRGKNYRRPISLRPRNLLTKAKALKRSVAMQRHEALSQHISD 757

Query: 2163 LERTIEGMKSEI 2198
            LE TIE MK EI
Sbjct: 758  LENTIEQMKKEI 769


>ref|XP_004235759.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Solanum lycopersicum]
          Length = 820

 Score =  791 bits (2043), Expect = 0.0
 Identities = 424/723 (58%), Positives = 501/723 (69%), Gaps = 3/723 (0%)
 Frame = +3

Query: 39   NTQQKGRSNTLRNTRRGNYSSSKSRAPSAPWLNKWPSEEKNDDSEKRDRA-EDRVESRYF 215
            N  +K      R++   +     + + S+ WLNKWP+           R  E + E+RYF
Sbjct: 44   NIPRKDNRKPYRDSNSSSTPVKSNNSRSSTWLNKWPNTSSPVKHSSNSRTVESKTETRYF 103

Query: 216  DGDK--GRSAIERIVFRLRNLGIASXXXXXXXXXXXXXXXXXXXXAEMPCTGEERLGDLL 389
            D +   G +AI+RIV RLRNLG+ S                           EE+LGDLL
Sbjct: 104  DENTRVGTTAIDRIVLRLRNLGLGSDDEGEGEDEEEGNLKLDSSSTMQVNGEEEKLGDLL 163

Query: 390  QRTWSRPDSVVLDCEDDDRMLLPWXXXXXXXXXXXXXXLKKRRVKAPSLAELTLEDVXXX 569
            +R W RPD ++ + +D+    LPW                KR V+APSLAELT+ED    
Sbjct: 164  KRDWVRPDMILEESDDEGDTYLPWERSVEEEAVEVQRG-GKRTVRAPSLAELTIEDEELR 222

Query: 570  XXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETLARDMKKAHEIVERR 749
                        IN+PKAGVT  +LEKIH  WRK ELVRLKFHE LA DM+  HEIVERR
Sbjct: 223  RLRRIGMTLRERINVPKAGVTGAVLEKIHHSWRKNELVRLKFHEVLAHDMRTGHEIVERR 282

Query: 750  TGGLVIWRSGSVMVVYRGSNYERPSLRTQSVSMVVDGPFVPNVSFADHLAAEDDKISSSI 929
            T GLVIWR+GSVMVVYRGSNYE PS R+QSV+   +  FVP+VS +D    +D+K  + +
Sbjct: 283  TKGLVIWRAGSVMVVYRGSNYEGPSSRSQSVNEEDNALFVPDVS-SDKSITKDNKSFNPV 341

Query: 930  PEKNQRTFQNQDPXXXXXXXXXXFNSLLDGLGPRFLDWWGTGLLPVDADMLPAFVPGYKT 1109
             E   +   N+            FN +LDGLGPRF DWWGTG+LPVDAD+LP  +PGYKT
Sbjct: 342  IENRNQVHPNR--VQSMTEEESEFNRVLDGLGPRFEDWWGTGVLPVDADLLPQTIPGYKT 399

Query: 1110 PFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVWEKSLVVKIA 1289
            PFRLLPTGMRSRLTNAEMTNLRK++KSLPCHFALGRNRNHQGLA+AIVK+WEKSLVVKIA
Sbjct: 400  PFRLLPTGMRSRLTNAEMTNLRKIAKSLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIA 459

Query: 1290 VKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIIIYRGKDFLPTSVAAALAERQELTKKV 1469
            VKRGIQNTNNKLM+             RNKYYII YRGKDF+P +VAA LAERQELTK++
Sbjct: 460  VKRGIQNTNNKLMSEELKMLTGGVLLLRNKYYIIFYRGKDFVPPTVAAVLAERQELTKQI 519

Query: 1470 QDVEEEVRIGAVGIATSEGFEGKAAAGTLAEFHEAQARWGREISTEEHENMQEEASRAKT 1649
            QDVEE+ R G   +A     +G+A AG+LAEF+EAQARWGREIS EE E M +EA+ AK 
Sbjct: 520  QDVEEQTRSGPAKVAPLI-TDGQAVAGSLAEFYEAQARWGREISAEERERMLKEAAMAKM 578

Query: 1650 ARIVRKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFMFRRVGLRMK 1829
            AR+V+++EH                     S +PAGPSDD ETIT+EER M RRVGLRMK
Sbjct: 579  ARVVKRLEHKFEISQTKKLKAEKILAKIVESWIPAGPSDDLETITEEERVMLRRVGLRMK 638

Query: 1830 AYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYESGGILVAIER 2009
            +YLPLGIRGVFDGVIENMHLHWKHRELVKLISK+K L+F+++TARLLEYESGGILVAIER
Sbjct: 639  SYLPLGIRGVFDGVIENMHLHWKHRELVKLISKEKVLAFVEETARLLEYESGGILVAIER 698

Query: 2010 VPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEGMK 2189
            VPKGYALI+YRGKNY+RPIS+RPRNLLTKAKALKR VA+QR+EALSQHI ELE TIE  K
Sbjct: 699  VPKGYALIFYRGKNYRRPISLRPRNLLTKAKALKRRVALQRYEALSQHIGELETTIEQTK 758

Query: 2190 SEI 2198
            S+I
Sbjct: 759  SKI 761


>ref|NP_188468.1| CRS1 / YhbY domain-containing protein EMB1865 [Arabidopsis thaliana]
            gi|11994102|dbj|BAB01105.1| unnamed protein product
            [Arabidopsis thaliana] gi|17380904|gb|AAL36264.1| unknown
            protein [Arabidopsis thaliana]
            gi|332642570|gb|AEE76091.1| CRS1 / YhbY (CRM)
            domain-containing protein [Arabidopsis thaliana]
          Length = 848

 Score =  790 bits (2040), Expect = 0.0
 Identities = 425/754 (56%), Positives = 519/754 (68%), Gaps = 33/754 (4%)
 Frame = +3

Query: 63   NTLRNTRRGNYSSSKSRA-------PSAPWLNKWPSEE-------------KNDDSEKRD 182
            ++LR + R N  S+ +R        P+ PW++KWP                +N+  ++  
Sbjct: 53   SSLRTSERSNNRSNNNRRLDQRNHKPTPPWIDKWPPSSSGAGGDHAGKKGGENNGGDRIR 112

Query: 183  RAEDRVES--RYFDGDKGRSAIERIVFRLRNLGIASXXXXXXXXXXXXXXXXXXXXAEMP 356
             AE+  E+  RY + DKG++AIERIV RLRNLG+ S                       P
Sbjct: 113  SAEEEAEAKLRYLEKDKGQNAIERIVLRLRNLGLGSDDEDDVEDDEGGGINGGDVK---P 169

Query: 357  CTGEERLGDLLQRTWSRPDSVVLD---CEDDDRMLLPWXXXXXXXXXXXXXX------LK 509
             TGEERLGDLL+R W RPD ++ +    E++D +LLPW                    ++
Sbjct: 170  VTGEERLGDLLKREWVRPDMMLAEGEESEEEDEVLLPWEKNEEEQAAERVVGEGGVAVMQ 229

Query: 510  KRRVKAPSLAELTLEDVXXXXXXXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRL 689
            KRR +APSLAELT+ED                INIPKAG+TQ ++EKI+D WRK ELVRL
Sbjct: 230  KRRARAPSLAELTVEDSELRRLRRDGMYLRVRINIPKAGLTQAVMEKIYDTWRKEELVRL 289

Query: 690  KFHETLARDMKKAHEIVERRTGGLVIWRSGSVMVVYRGSNYERPSLRTQSVSMVVDGPFV 869
            KFHE LARDMK AHEIVERRTGG+VIWR+GSVMVVYRG +Y+ P + +  ++   +  FV
Sbjct: 290  KFHEVLARDMKTAHEIVERRTGGMVIWRAGSVMVVYRGLDYKGPPVISNQMAGPKETLFV 349

Query: 870  PNVSFA-DHLAAEDDKISSSIPEKNQRTFQNQDPXXXXXXXXXXFNSLLDGLGPRFLDWW 1046
            P+VS A D      D  S+ +  K+    +N             FNSLLD LGPRF +WW
Sbjct: 350  PDVSSAGDEATNAKDNQSAPLVIKDP-IIKNPIRKENMTEEEVEFNSLLDSLGPRFQEWW 408

Query: 1047 GTGLLPVDADMLPAFVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRN 1226
            GTG+LPVDAD+LP  +PGYKTPFRLLPTGMRS LTNAEMTNLRK+ K+LPCHFALGRNRN
Sbjct: 409  GTGVLPVDADLLPPTIPGYKTPFRLLPTGMRSNLTNAEMTNLRKIGKTLPCHFALGRNRN 468

Query: 1227 HQGLASAIVKVWEKSLVVKIAVKRGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIIIYRGK 1406
            HQGLA+AI+++WEKSL+ KIAVKRGIQNTNNKLMA             RNKYYI+IYRGK
Sbjct: 469  HQGLAAAILQIWEKSLIAKIAVKRGIQNTNNKLMADEVKTLTGGVLLLRNKYYIVIYRGK 528

Query: 1407 DFLPTSVAAALAERQELTKKVQDVEEEVRIGAVGIATSEGFEGKAAAGTLAEFHEAQARW 1586
            DFLP+SVAA LAERQELTK++QDVEE VR   +      G +  A AGTLAEF+EAQARW
Sbjct: 529  DFLPSSVAATLAERQELTKEIQDVEERVRNREIEAVQPVGDKVPAEAGTLAEFYEAQARW 588

Query: 1587 GREISTEEHENMQEEASRAKTARIVRKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSD 1766
            G+EI+ +  E M EEASR   AR+V++I+H                   E SM+P GP  
Sbjct: 589  GKEITPDHREKMIEEASRVANARVVKRIQHKLNLAQSKFQRAEKLLSKIEASMIPNGPDY 648

Query: 1767 DQETITDEERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSF 1946
            DQE I++EER MFR+VGL+MKAYLP+GIRGVFDGVIENMHLHWKHRELVKLISKQK  +F
Sbjct: 649  DQEVISEEERAMFRKVGLKMKAYLPIGIRGVFDGVIENMHLHWKHRELVKLISKQKNQAF 708

Query: 1947 LQDTARLLEYESGGILVAIERVPKGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAM 2126
            +++TARLLEYESGG+LVAIE+VPKG+ALIYYRGKNY+RPIS+RPRNLLTKAKALKRS+AM
Sbjct: 709  VEETARLLEYESGGVLVAIEKVPKGFALIYYRGKNYRRPISLRPRNLLTKAKALKRSIAM 768

Query: 2127 QRHEALSQHISELERTIEGMKSEI-NEDDLYRES 2225
            QRHEALSQHISELERTIE M+S++ +++  Y ES
Sbjct: 769  QRHEALSQHISELERTIEQMQSQLTSKNPSYSES 802


>ref|XP_003530015.2| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like isoform X1 [Glycine max]
          Length = 791

 Score =  788 bits (2036), Expect = 0.0
 Identities = 420/698 (60%), Positives = 499/698 (71%), Gaps = 4/698 (0%)
 Frame = +3

Query: 117  PSAPWLNKWPSEEKNDDSEKRDRAEDRVESRYFDGDKGRSAIERIVFRLRNLGIASXXXX 296
            PSAPWL K PS ++  +      A D +  +     K  + +ERIV RLRNLG+ S    
Sbjct: 50   PSAPWLTKSPSPKRATEPLT---AGDPIPDK-----KPHNPVERIVLRLRNLGLPSEEEE 101

Query: 297  XXXXXXXXXXXXXXXXAEMPCTGEERLGDLLQRTWSRPDSVVLDCED-DDRMLLPWXXXX 473
                               P TGEERLG+LL+R W RPD+V++  +D ++ M+LPW    
Sbjct: 102  QEEEEEIPANNPA------PVTGEERLGELLRREWVRPDAVLVGEDDGEEEMILPWEREE 155

Query: 474  XXXXXXXXXX---LKKRRVKAPSLAELTLEDVXXXXXXXXXXXXXXXINIPKAGVTQVIL 644
                         LKKRRV+APSLA+LTLED                +++PKAG+TQ ++
Sbjct: 156  EKEVVVVVSEEGLLKKRRVRAPSLADLTLEDELLRRLRREGMRVRERVSVPKAGLTQEVM 215

Query: 645  EKIHDKWRKAELVRLKFHETLARDMKKAHEIVERRTGGLVIWRSGSVMVVYRGSNYERPS 824
            EKIH +WRK ELVRLKFHE LA+DM+KAHEIVERRTGGLV WRSGSVM+VYRG +Y+ P 
Sbjct: 216  EKIHKRWRKEELVRLKFHEELAKDMRKAHEIVERRTGGLVTWRSGSVMMVYRGIDYQGPD 275

Query: 825  LRTQSVSMVVDGPFVPNVSFADHLAAEDDKISSSIPEKNQRTFQNQDPXXXXXXXXXXFN 1004
             + +      DG FVP+VS       ED   ++S  EK++   + ++           +N
Sbjct: 276  SQKEVNEKKGDGFFVPDVS-----KREDSSTATSTSEKSEVVVREREHPENMSEAEAEYN 330

Query: 1005 SLLDGLGPRFLDWWGTGLLPVDADMLPAFVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLS 1184
            +LLDGLGPRF+ WWGTG+LPVDAD+LP  VPGYKTPFRLLPTGMRSRLTNAEMTNLRKL+
Sbjct: 331  ALLDGLGPRFVGWWGTGILPVDADLLPRTVPGYKTPFRLLPTGMRSRLTNAEMTNLRKLA 390

Query: 1185 KSLPCHFALGRNRNHQGLASAIVKVWEKSLVVKIAVKRGIQNTNNKLMAXXXXXXXXXXX 1364
            KSLPCHFALGRNRNHQGLA AI+K+WEKSLV KIAVKRGIQNTNN+LMA           
Sbjct: 391  KSLPCHFALGRNRNHQGLACAILKLWEKSLVAKIAVKRGIQNTNNELMAEELKMLTGGTL 450

Query: 1365 XXRNKYYIIIYRGKDFLPTSVAAALAERQELTKKVQDVEEEVRIGAVGIATSEGFEGKAA 1544
              RNKY+I+IYRGKDF+PTSVAA LAER+ELTK+VQDVE++VR  AV        E  A 
Sbjct: 451  LLRNKYFIVIYRGKDFVPTSVAAVLAEREELTKQVQDVEDKVRCRAVDAIPLGQGEATAQ 510

Query: 1545 AGTLAEFHEAQARWGREISTEEHENMQEEASRAKTARIVRKIEHXXXXXXXXXXXXXXXX 1724
            AGTLAEF+EAQARWGREIS EE E M EEA++ KTA++VR+IEH                
Sbjct: 511  AGTLAEFYEAQARWGREISPEEREKMVEEAAKTKTAKLVRQIEHKIFIAQTKKLRAEKLL 570

Query: 1725 XXXEVSMVPAGPSDDQETITDEERFMFRRVGLRMKAYLPLGIRGVFDGVIENMHLHWKHR 1904
               E SMVPAGP  DQETITDEER MFR+VGLRMK YLPLGIRGVFDGV+ENMHLHWKHR
Sbjct: 571  AKIEASMVPAGPDYDQETITDEERVMFRKVGLRMKPYLPLGIRGVFDGVVENMHLHWKHR 630

Query: 1905 ELVKLISKQKTLSFLQDTARLLEYESGGILVAIERVPKGYALIYYRGKNYQRPISIRPRN 2084
            ELVKL++KQKT++F++DTARLLEYESGGILVAIE+V K +ALIYYRGKNY+RPI++RPRN
Sbjct: 631  ELVKLMTKQKTVAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRGKNYKRPITLRPRN 690

Query: 2085 LLTKAKALKRSVAMQRHEALSQHISELERTIEGMKSEI 2198
            LLTK KALKR VAMQRHEALSQHI+ELE+TIE MK E+
Sbjct: 691  LLTKGKALKRHVAMQRHEALSQHITELEKTIEQMKKEL 728


>ref|XP_002532154.1| conserved hypothetical protein [Ricinus communis]
            gi|223528164|gb|EEF30228.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 745

 Score =  786 bits (2029), Expect = 0.0
 Identities = 419/704 (59%), Positives = 493/704 (70%), Gaps = 8/704 (1%)
 Frame = +3

Query: 60   SNTLRNTRRGNYSSSKSRAPSAPWLNKWPSEEKNDDSEKRDR--AEDRVESRYFDGDKGR 233
            S++  ++  G   + K   P +PWL+KW        + K     A+D+ + +    DKG+
Sbjct: 44   SSSSSSSSLGTNQNPKPNNPKSPWLSKWAPHSSPPPTVKTSPKLAQDK-KIQSLTKDKGQ 102

Query: 234  SAIERIVFRLRNLGIASXXXXXXXXXXXXXXXXXXXXAEMPCTGEERLGDLLQRTWSRPD 413
            +AIERIV RLRNLG+ S                      +  TGEERL DLLQR W RPD
Sbjct: 103  NAIERIVLRLRNLGLGSDDEEEEGDMEYKPNGGD----SIAVTGEERLADLLQREWVRPD 158

Query: 414  SVVL--DCEDD-DRMLLPWXXXXXXXXXXXXXXLKKRR---VKAPSLAELTLEDVXXXXX 575
            ++ +  D EDD D ++LPW               ++ R   VKAP+LAELT+ED      
Sbjct: 159  TIFIKDDEEDDNDDLVLPWERKEKVRREGEKEEGERERRRVVKAPTLAELTIEDEELRRL 218

Query: 576  XXXXXXXXXXINIPKAGVTQVILEKIHDKWRKAELVRLKFHETLARDMKKAHEIVERRTG 755
                      +N+PKAG+T+ ++EKIHDKWRK ELVRLKFHE LA DMK AHEI ERRTG
Sbjct: 219  RRMGMFLRERVNVPKAGLTKEVVEKIHDKWRKNELVRLKFHEVLAHDMKTAHEITERRTG 278

Query: 756  GLVIWRSGSVMVVYRGSNYERPSLRTQSVSMVVDGPFVPNVSFADHLAAEDDKISSSIPE 935
            GLVIWR+GSVMVVYRGS+YE P  +TQ V+   D  F+P+VS A     + D ++ S  E
Sbjct: 279  GLVIWRAGSVMVVYRGSSYEGPPSKTQPVNREGDALFIPDVSSAGSETMKGDNVAPSAAE 338

Query: 936  KNQRTFQNQDPXXXXXXXXXXFNSLLDGLGPRFLDWWGTGLLPVDADMLPAFVPGYKTPF 1115
            K +   +  D           ++S LD LGPRF +WWGTG+LPVDAD+LP  +P YKTPF
Sbjct: 339  KRELAMRRLDHSKDMTEEEIEYDSFLDSLGPRFEEWWGTGILPVDADLLPPKIPDYKTPF 398

Query: 1116 RLLPTGMRSRLTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVWEKSLVVKIAVK 1295
            RLLPTGMRSRLTNAEMTNLRKL+K LPCHFALGRNRNHQGLAS I+KVWEKSLV KIAVK
Sbjct: 399  RLLPTGMRSRLTNAEMTNLRKLAKKLPCHFALGRNRNHQGLASTILKVWEKSLVAKIAVK 458

Query: 1296 RGIQNTNNKLMAXXXXXXXXXXXXXRNKYYIIIYRGKDFLPTSVAAALAERQELTKKVQD 1475
            RGIQNTNNKLMA             RNKYYI+IYRGKDFLPTSVAAAL ERQELTKK+QD
Sbjct: 459  RGIQNTNNKLMADELKMLTGGVLLLRNKYYIVIYRGKDFLPTSVAAALTERQELTKKIQD 518

Query: 1476 VEEEVRIGAVGIATSEGFEGKAAAGTLAEFHEAQARWGREISTEEHENMQEEASRAKTAR 1655
            VEE+VR   +    S+  EGK  AGTLAEF+EAQ+RWG++ S E+ E M E+ +RAK AR
Sbjct: 519  VEEKVRSREIEAVPSKEEEGKPLAGTLAEFYEAQSRWGKDTSAEDREKMIEDDTRAKRAR 578

Query: 1656 IVRKIEHXXXXXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFMFRRVGLRMKAY 1835
            IV++IEH                   EVSM+P+GP  DQETITDEER +FRR+GLRMKAY
Sbjct: 579  IVKRIEHKLAVAQAKKLRAERLLAKIEVSMLPSGPDYDQETITDEERAVFRRIGLRMKAY 638

Query: 1836 LPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYESGGILVAIERVP 2015
            LPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTL+F +DTARLLEYESGGILVAIERVP
Sbjct: 639  LPLGIRGVFDGVIENMHLHWKHRELVKLISKQKTLAFAEDTARLLEYESGGILVAIERVP 698

Query: 2016 KGYALIYYRGKNYQRPISIRPRNLLTKAKALKRSVAMQRHEALS 2147
            KG+ALIYYRGKNY+RPI++RPRNLLTKAKALKRSVAMQRHE  S
Sbjct: 699  KGFALIYYRGKNYRRPINLRPRNLLTKAKALKRSVAMQRHEVSS 742


>ref|XP_004512920.1| PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1,
            chloroplastic-like [Cicer arietinum]
          Length = 809

 Score =  772 bits (1993), Expect = 0.0
 Identities = 414/715 (57%), Positives = 507/715 (70%), Gaps = 8/715 (1%)
 Frame = +3

Query: 90   NYSSSKSRA-PSAPWLNKWPSEEKNDDSEKRDRAEDRVESRYFDGDKGRSAIERIVFRLR 266
            ++SS KS + P+ PWL+   S ++  +S  ++ + +       D +K ++ +ERIVFRLR
Sbjct: 55   HHSSPKSNSNPTPPWLS---SPKRVTESPIKNESLNLQH----DNNKPKNPVERIVFRLR 107

Query: 267  NLGIASXXXXXXXXXXXXXXXXXXXXAEMPCTGEERLGDLLQRTWSRPDSVVLDCED--D 440
            NLG+A                     +E+P +G+E+L +LL+R W RPD++ LD ED  +
Sbjct: 108  NLGLAEEEGEKEQQEEEVEV------SELPVSGDEKLSELLKRKWVRPDAL-LDDEDKEE 160

Query: 441  DRMLLPWXXXXXXXXXXXXXX-----LKKRRVKAPSLAELTLEDVXXXXXXXXXXXXXXX 605
            D M+LPW                   LKKR +KAPSLAELTLED                
Sbjct: 161  DEMVLPWKREEEREMGGGDVGIDEEGLKKRTIKAPSLAELTLEDELLRRLRREGMRVRER 220

Query: 606  INIPKAGVTQVILEKIHDKWRKAELVRLKFHETLARDMKKAHEIVERRTGGLVIWRSGSV 785
            +++PKAG+TQ ++EKIH++WRK ELVRLKFHE LA++M+ AHEIVERRTGGLV WR+GSV
Sbjct: 221  VSVPKAGLTQEVMEKIHERWRKEELVRLKFHEELAKNMRVAHEIVERRTGGLVTWRAGSV 280

Query: 786  MVVYRGSNYERPSLRTQSVSMVVDGPFVPNVSFADHLAAEDDKISSSIPEKNQRTFQNQD 965
            M+VYRG NY+ P+   +  +   DG FVP+VS       +D   ++S+    Q   +N +
Sbjct: 281  MMVYRGKNYQGPNSSKELDAKEGDGFFVPDVSSKSSSRTKDSSTTASLKNSAQ-VRRNDE 339

Query: 966  PXXXXXXXXXXFNSLLDGLGPRFLDWWGTGLLPVDADMLPAFVPGYKTPFRLLPTGMRSR 1145
                       +N+LLDGLGPRF +WWGTG+LPVDAD+LP  +PGYKTP+RLLPTGMRSR
Sbjct: 340  QPENMTKEEAEYNALLDGLGPRFFEWWGTGILPVDADLLPRDIPGYKTPYRLLPTGMRSR 399

Query: 1146 LTNAEMTNLRKLSKSLPCHFALGRNRNHQGLASAIVKVWEKSLVVKIAVKRGIQNTNNKL 1325
            LT+AE+T+LRK++KSLPCHFALGRNR HQGLA AI+K+WEKSL+ KIAVK GIQNTNNKL
Sbjct: 400  LTSAEITDLRKIAKSLPCHFALGRNRYHQGLACAILKLWEKSLIAKIAVKPGIQNTNNKL 459

Query: 1326 MAXXXXXXXXXXXXXRNKYYIIIYRGKDFLPTSVAAALAERQELTKKVQDVEEEVRIGAV 1505
            MA             R+KYYI+IYRGKDF+PT VAA LAERQELTK+VQDVEE+VR  AV
Sbjct: 460  MADELVTLTGGTLLLRDKYYIVIYRGKDFVPTGVAAVLAERQELTKEVQDVEEKVRCKAV 519

Query: 1506 GIATSEGFEGKAAAGTLAEFHEAQARWGREISTEEHENMQEEASRAKTARIVRKIEHXXX 1685
                S   E    AGTLAEF+EAQARWGR+ISTEE E M EEA++AK+ ++V++IEH   
Sbjct: 520  VATPSGQGEATVLAGTLAEFYEAQARWGRDISTEERERMIEEAAKAKSVKLVKQIEHRLS 579

Query: 1686 XXXXXXXXXXXXXXXXEVSMVPAGPSDDQETITDEERFMFRRVGLRMKAYLPLGIRGVFD 1865
                            EVSMVP GP  DQETITDEER +FRR+GLRMK YLPLGIRGVFD
Sbjct: 580  LAQTKKIRAEKLLAKIEVSMVPVGPDYDQETITDEERAVFRRIGLRMKPYLPLGIRGVFD 639

Query: 1866 GVIENMHLHWKHRELVKLISKQKTLSFLQDTARLLEYESGGILVAIERVPKGYALIYYRG 2045
            GVIENMHLHWKHRELVKLI+KQK L+F++DTARLLEYESGGILVAIE+V K +ALIYYRG
Sbjct: 640  GVIENMHLHWKHRELVKLITKQKNLAFVEDTARLLEYESGGILVAIEKVSKEFALIYYRG 699

Query: 2046 KNYQRPISIRPRNLLTKAKALKRSVAMQRHEALSQHISELERTIEGMKSEINEDD 2210
            KNY+RPIS+RPRNLLTKAKALKRSVAMQRHEALS HI+ELE TIE MK EI   D
Sbjct: 700  KNYKRPISLRPRNLLTKAKALKRSVAMQRHEALSNHITELETTIEQMKQEIGLSD 754