BLASTX nr result
ID: Sinomenium22_contig00005678
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00005678
(1996 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I an... 617 e-174
ref|XP_007020444.1| RNA polymerase I subunit 43 isoform 1 [Theob... 596 e-167
gb|EYU27454.1| hypothetical protein MIMGU_mgv1a008198mg [Mimulus... 584 e-164
ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I an... 579 e-162
ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I an... 577 e-162
ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, ... 562 e-157
ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I an... 551 e-154
ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citr... 550 e-154
ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I an... 533 e-149
ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycin... 531 e-148
ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I an... 529 e-147
gb|EXB51013.1| DNA-directed RNA polymerases I and III subunit RP... 525 e-146
ref|XP_007020447.1| RNA polymerase I subunit 43 isoform 4 [Theob... 524 e-146
gb|EPS59249.1| hypothetical protein M569_15560, partial [Genlise... 521 e-145
ref|XP_004498147.1| PREDICTED: DNA-directed RNA polymerases I an... 521 e-145
ref|XP_004488284.1| PREDICTED: DNA-directed RNA polymerases I an... 520 e-144
ref|XP_002300385.1| DNA-directed RNA polymerase family protein [... 515 e-143
ref|XP_007146596.1| hypothetical protein PHAVU_006G053600g [Phas... 511 e-142
ref|XP_007205309.1| hypothetical protein PRUPE_ppa006811mg [Prun... 511 e-142
ref|NP_176261.1| RNA polymerase I subunit 43 [Arabidopsis thalia... 509 e-141
>ref|XP_002270559.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
[Vitis vinifera] gi|296089944|emb|CBI39763.3| unnamed
protein product [Vitis vinifera]
Length = 372
Score = 617 bits (1592), Expect = e-174
Identities = 301/372 (80%), Positives = 329/372 (88%)
Frame = +2
Query: 146 MSRVSALDMPDVPMGQLPPHLELQRTRVLCASDAPTHTENVEYSGAYAMMGIDNSLRSDD 325
M R ALDMPDVP GQLPPH+ELQRTRVLC DAPTHTENV+YSGAY+ MG+DNSLR D
Sbjct: 1 MHRSPALDMPDVPKGQLPPHIELQRTRVLCNFDAPTHTENVQYSGAYSSMGVDNSLRMDQ 60
Query: 326 FFKNFKVELIRLTEDDMEFDMIGIDASLANAFRRILISELPTMAIEKVLFANNTSVVQDE 505
F NF+VE+IRL+EDDMEFDMIGID S+ANAFRRILI+ELPTMAIEKVL ANNTS+VQDE
Sbjct: 61 FCNNFRVEVIRLSEDDMEFDMIGIDPSIANAFRRILIAELPTMAIEKVLIANNTSIVQDE 120
Query: 506 VLAHRLGLIPIKADPRLFEYMSENDTPNEKNTIVFKLHVQCKRGSPRITVKSDQLKWLPN 685
VLAHRLGLIPI ADPRLF+ +SENDTPNEKNTIVF LHV+C+RG PR+TVKS++LKWLP+
Sbjct: 121 VLAHRLGLIPINADPRLFDDLSENDTPNEKNTIVFNLHVRCERGGPRLTVKSNELKWLPH 180
Query: 686 GSEFLLATEXXXXXXXXXXXXXXXXXCGQASLPEFSDNPIAPKHDDIIIAKLGPGQEIEL 865
GSEF LATE C Q SLPEFSD I PKH DIIIAKLGPGQEIEL
Sbjct: 181 GSEFPLATENTTSSSTSKPKTYTSFSCSQDSLPEFSDKSIGPKHPDIIIAKLGPGQEIEL 240
Query: 866 EAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKADELVKKCPVNVFDIEDIGKG 1045
EAHAVKG+GKTHAKWSPVATAWYRMLPEVVLLQE+EDEKA+ELVKKCPVNVFDIEDI KG
Sbjct: 241 EAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLQEIEDEKAEELVKKCPVNVFDIEDIAKG 300
Query: 1046 KKRATVARPRACTLCRECIRGEDWEKHVALRRVKNHFIFTIESTGALPPEVLFTEAVKIL 1225
KK+ATVARPRACTLCRECIRG+DW+KHVA+RRVKNHFIFTIESTGALPPEVLF EAVK+L
Sbjct: 301 KKKATVARPRACTLCRECIRGDDWDKHVAIRRVKNHFIFTIESTGALPPEVLFNEAVKVL 360
Query: 1226 EDKCERVISDLS 1261
EDKCERVI++LS
Sbjct: 361 EDKCERVITELS 372
>ref|XP_007020444.1| RNA polymerase I subunit 43 isoform 1 [Theobroma cacao]
gi|508720072|gb|EOY11969.1| RNA polymerase I subunit 43
isoform 1 [Theobroma cacao]
Length = 383
Score = 596 bits (1537), Expect = e-167
Identities = 293/378 (77%), Positives = 324/378 (85%)
Frame = +2
Query: 128 DSRTLDMSRVSALDMPDVPMGQLPPHLELQRTRVLCASDAPTHTENVEYSGAYAMMGIDN 307
+ R + + S D+PDVP GQLPPHLELQRTRVLC DAP HTE+V YSGAYA MG+DN
Sbjct: 6 EERGEEKKKFSIWDLPDVPAGQLPPHLELQRTRVLCNKDAPIHTESVLYSGAYASMGVDN 65
Query: 308 SLRSDDFFKNFKVELIRLTEDDMEFDMIGIDASLANAFRRILISELPTMAIEKVLFANNT 487
SLR D F NF+VE++RLTE+DMEFDMIGIDA++ANAFRRILI+ELPTMAIEKVL ANNT
Sbjct: 66 SLRLDHFCHNFRVEVVRLTEEDMEFDMIGIDAAIANAFRRILIAELPTMAIEKVLIANNT 125
Query: 488 SVVQDEVLAHRLGLIPIKADPRLFEYMSENDTPNEKNTIVFKLHVQCKRGSPRITVKSDQ 667
SVVQDEVLAHRLGLIPI DPRLFEYMSEND PNEKNTIVFKLHV CKRGSPRITVKSD+
Sbjct: 126 SVVQDEVLAHRLGLIPISVDPRLFEYMSENDQPNEKNTIVFKLHVHCKRGSPRITVKSDE 185
Query: 668 LKWLPNGSEFLLATEXXXXXXXXXXXXXXXXXCGQASLPEFSDNPIAPKHDDIIIAKLGP 847
LKWLPNGSE + + C Q +LPEF++NPIAPK+ DIII+KLGP
Sbjct: 186 LKWLPNGSELIKESRKVASDSASKPETYTSFSCSQDTLPEFANNPIAPKYPDIIISKLGP 245
Query: 848 GQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKADELVKKCPVNVFDI 1027
GQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+EVED+ A+ L KCPVNVFDI
Sbjct: 246 GQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDDLAEGLKSKCPVNVFDI 305
Query: 1028 EDIGKGKKRATVARPRACTLCRECIRGEDWEKHVALRRVKNHFIFTIESTGALPPEVLFT 1207
ED+GKGKKRATVARPRACTLCRECIR E+WEK VA+ RVK+HFIFTIESTGALPPEVLFT
Sbjct: 306 EDLGKGKKRATVARPRACTLCRECIRDEEWEKRVAIHRVKDHFIFTIESTGALPPEVLFT 365
Query: 1208 EAVKILEDKCERVISDLS 1261
EAVKILEDKCERVI++LS
Sbjct: 366 EAVKILEDKCERVITELS 383
>gb|EYU27454.1| hypothetical protein MIMGU_mgv1a008198mg [Mimulus guttatus]
Length = 381
Score = 584 bits (1505), Expect = e-164
Identities = 281/370 (75%), Positives = 319/370 (86%)
Frame = +2
Query: 152 RVSALDMPDVPMGQLPPHLELQRTRVLCASDAPTHTENVEYSGAYAMMGIDNSLRSDDFF 331
++ D+PDVP G LP HLELQRTR +C +DAP HTEN++YSGAYA MG+DNS+R + F
Sbjct: 12 KIPVWDLPDVPSGNLPAHLELQRTRTVCTNDAPIHTENIQYSGAYASMGVDNSMRFEKFC 71
Query: 332 KNFKVELIRLTEDDMEFDMIGIDASLANAFRRILISELPTMAIEKVLFANNTSVVQDEVL 511
KNF+VE+IRL +D+MEFDM+GIDASLANAFRRILISELPTMAIE VL ANNTSVVQDEVL
Sbjct: 72 KNFRVEVIRLGDDEMEFDMVGIDASLANAFRRILISELPTMAIENVLVANNTSVVQDEVL 131
Query: 512 AHRLGLIPIKADPRLFEYMSENDTPNEKNTIVFKLHVQCKRGSPRITVKSDQLKWLPNGS 691
AHRLGLIP+K DPRLF Y SEND P+EKNTIVFKLH +C++ S RI VKS +LKWLP GS
Sbjct: 132 AHRLGLIPLKVDPRLFNYKSENDQPSEKNTIVFKLHSRCEKKSSRINVKSSELKWLPGGS 191
Query: 692 EFLLATEXXXXXXXXXXXXXXXXXCGQASLPEFSDNPIAPKHDDIIIAKLGPGQEIELEA 871
EF L+TE C Q SLPEFS NPIAP HDDI +A LGPGQEIELEA
Sbjct: 192 EFALSTEKPTQDSTSKVKTYTSFTCSQDSLPEFSSNPIAPTHDDITLAVLGPGQEIELEA 251
Query: 872 HAVKGIGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKADELVKKCPVNVFDIEDIGKGKK 1051
HAVKG+GKTHAKWSPVATAWYRMLPEV+LLQE+EDEKA+EL+KKCPVNVFDIEDIGKG+K
Sbjct: 252 HAVKGMGKTHAKWSPVATAWYRMLPEVILLQEIEDEKAEELIKKCPVNVFDIEDIGKGRK 311
Query: 1052 RATVARPRACTLCRECIRGEDWEKHVALRRVKNHFIFTIESTGALPPEVLFTEAVKILED 1231
RATVARPR+CTLCRECIRG+DW+K VAL+RVK+HFIFTIESTGALPP+VLFTEAVKILED
Sbjct: 312 RATVARPRSCTLCRECIRGDDWDKLVALQRVKDHFIFTIESTGALPPDVLFTEAVKILED 371
Query: 1232 KCERVISDLS 1261
KCERVI+++S
Sbjct: 372 KCERVITEMS 381
>ref|XP_004251939.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Solanum lycopersicum]
Length = 393
Score = 579 bits (1492), Expect = e-162
Identities = 281/371 (75%), Positives = 320/371 (86%)
Frame = +2
Query: 149 SRVSALDMPDVPMGQLPPHLELQRTRVLCASDAPTHTENVEYSGAYAMMGIDNSLRSDDF 328
++VS D+PD+P G+LPPH+ELQRTRVLC S APT+TENV YSGAYA MG+DNS+R + F
Sbjct: 23 TKVSVWDLPDLPKGKLPPHIELQRTRVLCGSLAPTNTENVNYSGAYAAMGVDNSVRFEQF 82
Query: 329 FKNFKVELIRLTEDDMEFDMIGIDASLANAFRRILISELPTMAIEKVLFANNTSVVQDEV 508
NFKVE++RL ED++EFDMIGID SLANAFRRILI+ELPTMAIEKVL ANNTS++QDEV
Sbjct: 83 RDNFKVEIVRLEEDELEFDMIGIDPSLANAFRRILIAELPTMAIEKVLIANNTSIIQDEV 142
Query: 509 LAHRLGLIPIKADPRLFEYMSENDTPNEKNTIVFKLHVQCKRGSPRITVKSDQLKWLPNG 688
LAHRLGLIPIK DPRLFEYMSEND PNEKNTIVFKLHV+C +GS R+ V S +LKWLPNG
Sbjct: 143 LAHRLGLIPIKVDPRLFEYMSENDVPNEKNTIVFKLHVRCTKGSDRLRVLSSELKWLPNG 202
Query: 689 SEFLLATEXXXXXXXXXXXXXXXXXCGQASLPEFSDNPIAPKHDDIIIAKLGPGQEIELE 868
SE +L TE C Q + PEFSD PIAPK DII+AKLGPGQEIELE
Sbjct: 203 SELILGTEHSASSSSAKPKTYTSFSCSQDTRPEFSDEPIAPKDADIIVAKLGPGQEIELE 262
Query: 869 AHAVKGIGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKADELVKKCPVNVFDIEDIGKGK 1048
AHAVKG+GKTHAKWSPVATAWYRMLPEV+LL+++ED++A+ LVKKCP+ VFDIEDIGKGK
Sbjct: 263 AHAVKGMGKTHAKWSPVATAWYRMLPEVLLLRDIEDDEAEALVKKCPLKVFDIEDIGKGK 322
Query: 1049 KRATVARPRACTLCRECIRGEDWEKHVALRRVKNHFIFTIESTGALPPEVLFTEAVKILE 1228
KRATVARPRACTLCRECIR E W+K+VALRRV +HFIFTIESTGALPPEVLFTEAVKILE
Sbjct: 323 KRATVARPRACTLCRECIREEGWDKNVALRRVNDHFIFTIESTGALPPEVLFTEAVKILE 382
Query: 1229 DKCERVISDLS 1261
+KCERVI++LS
Sbjct: 383 EKCERVITELS 393
>ref|XP_006344900.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Solanum tuberosum]
Length = 393
Score = 577 bits (1488), Expect = e-162
Identities = 280/371 (75%), Positives = 320/371 (86%)
Frame = +2
Query: 149 SRVSALDMPDVPMGQLPPHLELQRTRVLCASDAPTHTENVEYSGAYAMMGIDNSLRSDDF 328
++VS D+PD+P G+LPPH+ELQRTRVLC S APT+TENV YSGAYA MG+DNS+R + F
Sbjct: 23 TKVSVWDLPDLPKGKLPPHIELQRTRVLCGSLAPTNTENVNYSGAYAAMGVDNSVRFEQF 82
Query: 329 FKNFKVELIRLTEDDMEFDMIGIDASLANAFRRILISELPTMAIEKVLFANNTSVVQDEV 508
NFKVE++RL ED++EFDMIGID SLANAFRRILI+ELPTMAIEKVL ANNTS++QDEV
Sbjct: 83 RNNFKVEIVRLEEDELEFDMIGIDPSLANAFRRILIAELPTMAIEKVLIANNTSIIQDEV 142
Query: 509 LAHRLGLIPIKADPRLFEYMSENDTPNEKNTIVFKLHVQCKRGSPRITVKSDQLKWLPNG 688
LAHRLGLIPI+ DPRLFEYMSEND PNEKNTIVFKLH +C +GS R+ V S +LKWLPNG
Sbjct: 143 LAHRLGLIPIEVDPRLFEYMSENDVPNEKNTIVFKLHARCTKGSDRLRVLSSELKWLPNG 202
Query: 689 SEFLLATEXXXXXXXXXXXXXXXXXCGQASLPEFSDNPIAPKHDDIIIAKLGPGQEIELE 868
SE +L TE C Q +LPEFS++PIAPK DII+AKLGPGQEIELE
Sbjct: 203 SELILGTEHSASSSSAKPKTYTSFSCSQDTLPEFSNDPIAPKDADIIVAKLGPGQEIELE 262
Query: 869 AHAVKGIGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKADELVKKCPVNVFDIEDIGKGK 1048
AHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+++ED++A+ LVKKCPV VFDIEDIGKGK
Sbjct: 263 AHAVKGMGKTHAKWSPVATAWYRMLPEVVLLRDIEDDEAEALVKKCPVKVFDIEDIGKGK 322
Query: 1049 KRATVARPRACTLCRECIRGEDWEKHVALRRVKNHFIFTIESTGALPPEVLFTEAVKILE 1228
KRATVARPR CTLCRECIR E W+K+VALRRV +HFIFTIESTGALPPEVLFTEAVKILE
Sbjct: 323 KRATVARPRICTLCRECIREEGWDKNVALRRVNDHFIFTIESTGALPPEVLFTEAVKILE 382
Query: 1229 DKCERVISDLS 1261
+KCERVI++LS
Sbjct: 383 EKCERVITELS 393
>ref|XP_002522786.1| DNA-directed RNA polymerase I/III subunits, putative [Ricinus
communis] gi|223538024|gb|EEF39637.1| DNA-directed RNA
polymerase I/III subunits, putative [Ricinus communis]
Length = 374
Score = 562 bits (1448), Expect = e-157
Identities = 275/370 (74%), Positives = 312/370 (84%)
Frame = +2
Query: 152 RVSALDMPDVPMGQLPPHLELQRTRVLCASDAPTHTENVEYSGAYAMMGIDNSLRSDDFF 331
+ S D+PDVPMGQLPPHL+LQRTRV+C SDAP HT+N+ YSGAYA +G+DNSL+ D F
Sbjct: 13 KFSIWDLPDVPMGQLPPHLQLQRTRVVCKSDAPIHTDNIVYSGAYASIGVDNSLQLDCFR 72
Query: 332 KNFKVELIRLTEDDMEFDMIGIDASLANAFRRILISELPTMAIEKVLFANNTSVVQDEVL 511
NFKVE+I+LT+DDMEFDMIGIDA++ANAFRRILISELPTMAIEKVL ANNTS++QDEVL
Sbjct: 73 DNFKVEVIQLTKDDMEFDMIGIDAAIANAFRRILISELPTMAIEKVLIANNTSLIQDEVL 132
Query: 512 AHRLGLIPIKADPRLFEYMSENDTPNEKNTIVFKLHVQCKRGSPRITVKSDQLKWLPNGS 691
AHRLGLIPI ADPRLFEY+S NDTPNEKNTIVFKLH CKRG PR TV S++LKWLP GS
Sbjct: 133 AHRLGLIPINADPRLFEYLSANDTPNEKNTIVFKLHASCKRGEPRRTVYSEELKWLPGGS 192
Query: 692 EFLLATEXXXXXXXXXXXXXXXXXCGQASLPEFSDNPIAPKHDDIIIAKLGPGQEIELEA 871
+ L +E +F P++P D II+AKLGPGQEIELEA
Sbjct: 193 QLLKESEKADSKPSTYTSF--------TDKQDFIPKPVSPSEDKIIVAKLGPGQEIELEA 244
Query: 872 HAVKGIGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKADELVKKCPVNVFDIEDIGKGKK 1051
HAVKG+GKTHAKWSPVATAWYRMLPEVVLL+++EDE A+EL KKCPVNVFDIEDIG GKK
Sbjct: 245 HAVKGLGKTHAKWSPVATAWYRMLPEVVLLEDIEDEIAEELTKKCPVNVFDIEDIGNGKK 304
Query: 1052 RATVARPRACTLCRECIRGEDWEKHVALRRVKNHFIFTIESTGALPPEVLFTEAVKILED 1231
RATVARPRACTLCRECIRG +W+K V+LRRVK+HFIFTIESTGALPPEVLFTEAVK+LED
Sbjct: 305 RATVARPRACTLCRECIRGGEWDKRVSLRRVKDHFIFTIESTGALPPEVLFTEAVKVLED 364
Query: 1232 KCERVISDLS 1261
KCERVI++LS
Sbjct: 365 KCERVITELS 374
>ref|XP_006474843.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Citrus sinensis]
Length = 382
Score = 551 bits (1419), Expect = e-154
Identities = 279/369 (75%), Positives = 313/369 (84%), Gaps = 1/369 (0%)
Frame = +2
Query: 158 SALDMPDVPMGQLPPHLELQRTRVLCASDAPTHTENVEYSGAYAMMGIDNSLRSDDFFKN 337
S D+PDVP +LPPH+E QRTRV C DAP HTENV YSGAYA MG+DNSL+ D F N
Sbjct: 17 SIWDLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASMGVDNSLQLDHFCNN 75
Query: 338 FKVELIRLTEDDMEFDMIGIDASLANAFRRILISELPTMAIEKVLFANNTSVVQDEVLAH 517
F+VE+IRLT+DDMEFD+IGIDA++ANAFRRILI+ELPTMAIEKVL ANNTSV+QDEVLAH
Sbjct: 76 FRVEVIRLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVIQDEVLAH 135
Query: 518 RLGLIPIKADPRLFEYMSENDTPNEKNTIVFKLHVQCKRGSPRITVKSDQLKWLPNGSEF 697
RLGLIPI DPRLFEYMSENDT NEKNTIVFKLHV C+RG PR+TVK+++LKWLPNGSE
Sbjct: 136 RLGLIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLCERGGPRLTVKTNELKWLPNGSEL 195
Query: 698 LLATEXXXXXXXXXXXXXXXXXCGQASLPEFSDNPIAPKHDDIIIAKLGPGQEIELEAHA 877
L T+ Q SLPEFS+NPI P DI IA+LGPGQEIELEAHA
Sbjct: 196 PLETK-PDSNPLSKPRTYTSFSSSQDSLPEFSNNPIRPML-DITIARLGPGQEIELEAHA 253
Query: 878 VKGIGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKADELVKKCPVNVFDIEDIGKGKKRA 1057
VKGIGKTHAKWSPVATAWYRMLPE+VLL++VEDE A++LVK CPVNVFDIEDIG GKKRA
Sbjct: 254 VKGIGKTHAKWSPVATAWYRMLPEIVLLEDVEDEDAEKLVKTCPVNVFDIEDIGSGKKRA 313
Query: 1058 TVARPRACTLCRECIR-GEDWEKHVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDK 1234
TVA+PRACTLCREC+R GE+WEK V++RRVK+HFIFTIESTGAL PE LFTEAVKILEDK
Sbjct: 314 TVAQPRACTLCRECLRCGEEWEKRVSIRRVKDHFIFTIESTGALSPETLFTEAVKILEDK 373
Query: 1235 CERVISDLS 1261
CERVI++LS
Sbjct: 374 CERVITELS 382
>ref|XP_006452630.1| hypothetical protein CICLE_v10008413mg [Citrus clementina]
gi|557555856|gb|ESR65870.1| hypothetical protein
CICLE_v10008413mg [Citrus clementina]
Length = 421
Score = 550 bits (1417), Expect = e-154
Identities = 279/369 (75%), Positives = 312/369 (84%), Gaps = 1/369 (0%)
Frame = +2
Query: 158 SALDMPDVPMGQLPPHLELQRTRVLCASDAPTHTENVEYSGAYAMMGIDNSLRSDDFFKN 337
S D+PDVP +LPPH+E QRTRV C DAP HTENV YSGAYA MG+DNSL+ D F N
Sbjct: 56 SIWDLPDVPQ-KLPPHIEFQRTRVQCNLDAPIHTENVMYSGAYASMGVDNSLQLDHFCNN 114
Query: 338 FKVELIRLTEDDMEFDMIGIDASLANAFRRILISELPTMAIEKVLFANNTSVVQDEVLAH 517
F+VE+IRLT+DDMEFD+IGIDA++ANAFRRILI+ELPTMAIEKVL ANNTSV+QDEVLAH
Sbjct: 115 FRVEVIRLTKDDMEFDLIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVIQDEVLAH 174
Query: 518 RLGLIPIKADPRLFEYMSENDTPNEKNTIVFKLHVQCKRGSPRITVKSDQLKWLPNGSEF 697
RLGLIPI DPRLFEYMSENDT NEKNTIVFKLHV C+RG PR+TVK+++LKWLPNGSE
Sbjct: 175 RLGLIPIIVDPRLFEYMSENDTSNEKNTIVFKLHVLCERGGPRLTVKTNELKWLPNGSEL 234
Query: 698 LLATEXXXXXXXXXXXXXXXXXCGQASLPEFSDNPIAPKHDDIIIAKLGPGQEIELEAHA 877
L T+ Q LPEFS+NPI P DI IA+LGPGQEIELEAHA
Sbjct: 235 PLETK-PDSNPSSKPRTYTSFSSSQDLLPEFSNNPIRPML-DITIARLGPGQEIELEAHA 292
Query: 878 VKGIGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKADELVKKCPVNVFDIEDIGKGKKRA 1057
VKGIGKTHAKWSPVATAWYRMLPE+VLL++VEDE A++LVK CPVNVFDIEDIG GKKRA
Sbjct: 293 VKGIGKTHAKWSPVATAWYRMLPEIVLLEDVEDEDAEKLVKTCPVNVFDIEDIGSGKKRA 352
Query: 1058 TVARPRACTLCRECIR-GEDWEKHVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDK 1234
TVARPRACTLCREC+R GE+WEK V++RRVK+HFIFTIESTGAL PE LFTEAVKILEDK
Sbjct: 353 TVARPRACTLCRECLRCGEEWEKRVSIRRVKDHFIFTIESTGALSPETLFTEAVKILEDK 412
Query: 1235 CERVISDLS 1261
CERVI++LS
Sbjct: 413 CERVITELS 421
>ref|XP_004148257.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Cucumis sativus] gi|449522768|ref|XP_004168398.1|
PREDICTED: DNA-directed RNA polymerases I and III subunit
RPAC1-like [Cucumis sativus]
Length = 391
Score = 533 bits (1374), Expect = e-149
Identities = 268/367 (73%), Positives = 308/367 (83%), Gaps = 1/367 (0%)
Frame = +2
Query: 164 LDMPDVPMGQLPPHLELQRTRVLCASDAPTHTENVEYSGAYAMMGIDNSLRSDDFFKNFK 343
+++PDVPM +LPPH+ELQRTRV C +DAP HT+ ++YSGA+A MG DNSLR D+F NFK
Sbjct: 30 MNLPDVPM-KLPPHVELQRTRVECKADAPIHTDTIQYSGAFASMGFDNSLRLDNFRNNFK 88
Query: 344 VELIRLTEDDMEFDMIGIDASLANAFRRILISELPTMAIEKVLFANNTSVVQDEVLAHRL 523
+E+I L EDD+EFDMIGID +LANAFRRILISE+PTMAIEKVLFANNTS+VQDEVLAHRL
Sbjct: 89 IEVIDLKEDDIEFDMIGIDPALANAFRRILISEVPTMAIEKVLFANNTSIVQDEVLAHRL 148
Query: 524 GLIPIKADPRLFEYMSENDTPNEKNTIVFKLHVQCKRGSPRITVKSDQLKWLPNGSEFLL 703
GL+PI+ DPRLF+Y S+ D PNE NTIVF+LH C+RG PR+TV S L WLPNGSEF L
Sbjct: 149 GLVPIRVDPRLFKY-SDKDAPNENNTIVFRLHACCERGKPRLTVTSKALTWLPNGSEFPL 207
Query: 704 ATEXXXXXXXXXXXXXXXXXCGQASL-PEFSDNPIAPKHDDIIIAKLGPGQEIELEAHAV 880
++ C Q +L EFS+NPI PK DII+A+LGPGQEIELEAHAV
Sbjct: 208 VSD--KSVSNSKPKTYTSFSCSQNTLSKEFSNNPIGPKDSDIILARLGPGQEIELEAHAV 265
Query: 881 KGIGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKADELVKKCPVNVFDIEDIGKGKKRAT 1060
KG+GKTHAKWSPVATAWYRMLPEVVL++E+EDE A+EL KKCPVNVFDIEDI GKKRAT
Sbjct: 266 KGMGKTHAKWSPVATAWYRMLPEVVLMEEIEDELAEELEKKCPVNVFDIEDIA-GKKRAT 324
Query: 1061 VARPRACTLCRECIRGEDWEKHVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCE 1240
VARPR CTLCRECIRG+ WEK VALRRVK+HFIF IESTGALPPEVLFTEAVKILEDKCE
Sbjct: 325 VARPRDCTLCRECIRGDAWEKRVALRRVKDHFIFKIESTGALPPEVLFTEAVKILEDKCE 384
Query: 1241 RVISDLS 1261
R+I++LS
Sbjct: 385 RLIAELS 391
>ref|NP_001242652.1| uncharacterized protein LOC100786622 [Glycine max]
gi|255637183|gb|ACU18922.1| unknown [Glycine max]
Length = 388
Score = 531 bits (1367), Expect = e-148
Identities = 274/383 (71%), Positives = 313/383 (81%), Gaps = 2/383 (0%)
Frame = +2
Query: 119 ISFDSRTLDMSRVSALDMPDVPMGQLPPHLELQRTRVLCASDAPTHTENVEYSGAYAMMG 298
+S S L + + +LD +VP +LPPHLEL +TRVLC +DAP HT+ V+YSGAYA++G
Sbjct: 11 MSEQSNELGLDFILSLD--NVP-SKLPPHLELFKTRVLCNNDAPVHTDTVQYSGAYAILG 67
Query: 299 IDNSLRSDDFFKNFKVELIRLTEDDMEFDMIGIDASLANAFRRILISELPTMAIEKVLFA 478
+DNS+R D F +NFKVE+ RLT+ D+EFDMIGID ++ANAFRRILI+E+PTMAIE+V A
Sbjct: 68 VDNSVRLDSFCENFKVEVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERVYIA 127
Query: 479 NNTSVVQDEVLAHRLGLIPIKADPRLFEYMSE-NDTPNEKNTIVFKLHVQCKRGSPRITV 655
NNTSVVQDEVL+HRLGLIPI+ADPRLFEY D NEKNTIVFKLHV+C+ G PRITV
Sbjct: 128 NNTSVVQDEVLSHRLGLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRCQVGQPRITV 187
Query: 656 KSDQLKWLPNGSEFLLATEXXXXXXXXXXXXXXXXXCGQASLPEFSDNPIAPKHDDIIIA 835
KSD+LKWLPNGSE L E C Q SLPEFS+N I + DII+A
Sbjct: 188 KSDKLKWLPNGSE--LPCEGVKPNAGSKPKTFTSFTCSQDSLPEFSNNSIGLTYSDIILA 245
Query: 836 KLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKADELVKKCPVN 1015
KLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLL+ VEDE A+EL KCPVN
Sbjct: 246 KLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLEAVEDELAEELKNKCPVN 305
Query: 1016 VFDIEDIGKGKKRATVARPRACTLCRECIR-GEDWEKHVALRRVKNHFIFTIESTGALPP 1192
VFDIEDIGKGK+RA VARPR CTLCRECIR G++WE V+LRRVKNHFIFTIESTGALPP
Sbjct: 306 VFDIEDIGKGKRRAKVARPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTGALPP 365
Query: 1193 EVLFTEAVKILEDKCERVISDLS 1261
EVLFTEAVKILEDKCERVI++LS
Sbjct: 366 EVLFTEAVKILEDKCERVITELS 388
>ref|XP_003532185.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1
[Glycine max]
Length = 393
Score = 529 bits (1363), Expect = e-147
Identities = 273/383 (71%), Positives = 313/383 (81%), Gaps = 2/383 (0%)
Frame = +2
Query: 119 ISFDSRTLDMSRVSALDMPDVPMGQLPPHLELQRTRVLCASDAPTHTENVEYSGAYAMMG 298
+S S L + + +LD +VP +LPPHLEL +TRVLC +DAP HT+ V+YSGAYA+MG
Sbjct: 16 MSEQSNELGLDFILSLD--NVP-SKLPPHLELFKTRVLCNNDAPVHTDTVQYSGAYAIMG 72
Query: 299 IDNSLRSDDFFKNFKVELIRLTEDDMEFDMIGIDASLANAFRRILISELPTMAIEKVLFA 478
+DNS+R D F +NFKVE+ RLT+ D+EFDMIGID ++ANAFRRILI+E+PTMAIE+V A
Sbjct: 73 VDNSVRLDSFCENFKVEVKRLTDSDIEFDMIGIDPAIANAFRRILIAEVPTMAIERVYIA 132
Query: 479 NNTSVVQDEVLAHRLGLIPIKADPRLFEY-MSENDTPNEKNTIVFKLHVQCKRGSPRITV 655
NNTSVVQDEVL+HRLGLIPI+ADPRLFEY + D NEKNTIVFKLHV+C+ G PRITV
Sbjct: 133 NNTSVVQDEVLSHRLGLIPIRADPRLFEYPENAGDDKNEKNTIVFKLHVRCQVGQPRITV 192
Query: 656 KSDQLKWLPNGSEFLLATEXXXXXXXXXXXXXXXXXCGQASLPEFSDNPIAPKHDDIIIA 835
KSD+LKWLPNGSE L E C Q SLPEFS+N I + DII+A
Sbjct: 193 KSDKLKWLPNGSE--LPCEDVKPNAGSKPKTFTSFTCSQDSLPEFSNNSIGLTYSDIILA 250
Query: 836 KLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKADELVKKCPVN 1015
KLGPGQEIELEAHAVKG GKTHAKWSPVAT WYRMLPEVVLL++VEDE A+EL KCPVN
Sbjct: 251 KLGPGQEIELEAHAVKGTGKTHAKWSPVATTWYRMLPEVVLLKDVEDELAEELKNKCPVN 310
Query: 1016 VFDIEDIGKGKKRATVARPRACTLCRECIR-GEDWEKHVALRRVKNHFIFTIESTGALPP 1192
VFDIEDIGKGK+RA VARPR CTLCRECIR G++WE V+LRRVKNHFIFTIESTGALPP
Sbjct: 311 VFDIEDIGKGKRRAKVARPRDCTLCRECIRGGKEWEDRVSLRRVKNHFIFTIESTGALPP 370
Query: 1193 EVLFTEAVKILEDKCERVISDLS 1261
EVLFTEAVKILEDKCERVI++LS
Sbjct: 371 EVLFTEAVKILEDKCERVITELS 393
>gb|EXB51013.1| DNA-directed RNA polymerases I and III subunit RPAC1 [Morus
notabilis]
Length = 411
Score = 525 bits (1352), Expect = e-146
Identities = 271/366 (74%), Positives = 303/366 (82%), Gaps = 2/366 (0%)
Frame = +2
Query: 170 MPDVPMGQLPPHLELQRTRVLCASDAPTHTENVEYSGAYAMMGIDNSLRSDDFFKNFKVE 349
+ DVPMG+LPPHLE QRT V C +DAP HT+ ++YSGAYA +G+DNS+R D F NF+VE
Sbjct: 49 LSDVPMGKLPPHLEFQRTHVECKADAPLHTDTIQYSGAYASLGVDNSVRMDSFCDNFRVE 108
Query: 350 LIRLTEDDMEFDMIGIDASLANAFRRILISELPTMAIEKVLFANNTSVVQDEVLAHRLGL 529
++RLTEDDMEFDMIGID +LANAFRRILISE+PTMAIE+VL ANNTSVVQDEVLAHRLGL
Sbjct: 109 VMRLTEDDMEFDMIGIDPALANAFRRILISEVPTMAIERVLIANNTSVVQDEVLAHRLGL 168
Query: 530 IPIKADPRLFEYMSENDTPNEKNTIVFKLHVQCKRGSPRITVKSDQLKWLPNGSEFLLAT 709
IPI DPRLFE+ + N+TPNEKNTIVFKLHV+ K P +VKS++L W P GSEFLLA+
Sbjct: 169 IPINVDPRLFEF-AGNNTPNEKNTIVFKLHVRRKPNEPS-SVKSNELIWSPKGSEFLLAS 226
Query: 710 E-XXXXXXXXXXXXXXXXXCGQASLPEFSDNPIAPKHDDIIIAKLGPGQEIELEAHAVKG 886
E C Q SLPEFS+N I ++I+IAKLGPGQEIELEAHAVKG
Sbjct: 227 EDSKSADTSSKPRTYTSFTCRQDSLPEFSNNAIKVM-ENILIAKLGPGQEIELEAHAVKG 285
Query: 887 IGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKADELVKKCPVNVFDIEDIGKGKKRATVA 1066
IGKTHAKWSPVATAWYRMLPEVVLLQEVEDE A+EL KCPV VFDIEDIGKG+KRATVA
Sbjct: 286 IGKTHAKWSPVATAWYRMLPEVVLLQEVEDEAAEELKAKCPVGVFDIEDIGKGRKRATVA 345
Query: 1067 RPRACTLCRECIR-GEDWEKHVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCER 1243
RPR CTLCRECIR G+ WE V+LRR KNHFIF IESTGALPPEVLFTEAVKILEDKCER
Sbjct: 346 RPRGCTLCRECIRGGQQWEDRVSLRRRKNHFIFNIESTGALPPEVLFTEAVKILEDKCER 405
Query: 1244 VISDLS 1261
VI+DLS
Sbjct: 406 VIADLS 411
>ref|XP_007020447.1| RNA polymerase I subunit 43 isoform 4 [Theobroma cacao]
gi|508720075|gb|EOY11972.1| RNA polymerase I subunit 43
isoform 4 [Theobroma cacao]
Length = 323
Score = 524 bits (1349), Expect = e-146
Identities = 257/323 (79%), Positives = 283/323 (87%)
Frame = +2
Query: 293 MGIDNSLRSDDFFKNFKVELIRLTEDDMEFDMIGIDASLANAFRRILISELPTMAIEKVL 472
MG+DNSLR D F NF+VE++RLTE+DMEFDMIGIDA++ANAFRRILI+ELPTMAIEKVL
Sbjct: 1 MGVDNSLRLDHFCHNFRVEVVRLTEEDMEFDMIGIDAAIANAFRRILIAELPTMAIEKVL 60
Query: 473 FANNTSVVQDEVLAHRLGLIPIKADPRLFEYMSENDTPNEKNTIVFKLHVQCKRGSPRIT 652
ANNTSVVQDEVLAHRLGLIPI DPRLFEYMSEND PNEKNTIVFKLHV CKRGSPRIT
Sbjct: 61 IANNTSVVQDEVLAHRLGLIPISVDPRLFEYMSENDQPNEKNTIVFKLHVHCKRGSPRIT 120
Query: 653 VKSDQLKWLPNGSEFLLATEXXXXXXXXXXXXXXXXXCGQASLPEFSDNPIAPKHDDIII 832
VKSD+LKWLPNGSE + + C Q +LPEF++NPIAPK+ DIII
Sbjct: 121 VKSDELKWLPNGSELIKESRKVASDSASKPETYTSFSCSQDTLPEFANNPIAPKYPDIII 180
Query: 833 AKLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKADELVKKCPV 1012
+KLGPGQEIELEAHAVKG+GKTHAKWSPVATAWYRMLPEVVLL+EVED+ A+ L KCPV
Sbjct: 181 SKLGPGQEIELEAHAVKGMGKTHAKWSPVATAWYRMLPEVVLLEEVEDDLAEGLKSKCPV 240
Query: 1013 NVFDIEDIGKGKKRATVARPRACTLCRECIRGEDWEKHVALRRVKNHFIFTIESTGALPP 1192
NVFDIED+GKGKKRATVARPRACTLCRECIR E+WEK VA+ RVK+HFIFTIESTGALPP
Sbjct: 241 NVFDIEDLGKGKKRATVARPRACTLCRECIRDEEWEKRVAIHRVKDHFIFTIESTGALPP 300
Query: 1193 EVLFTEAVKILEDKCERVISDLS 1261
EVLFTEAVKILEDKCERVI++LS
Sbjct: 301 EVLFTEAVKILEDKCERVITELS 323
>gb|EPS59249.1| hypothetical protein M569_15560, partial [Genlisea aurea]
Length = 364
Score = 521 bits (1342), Expect = e-145
Identities = 250/362 (69%), Positives = 298/362 (82%)
Frame = +2
Query: 167 DMPDVPMGQLPPHLELQRTRVLCASDAPTHTENVEYSGAYAMMGIDNSLRSDDFFKNFKV 346
D+PDVP G+LPPHL+LQRTRVLC S+APT+TEN++YSGAYA+MG+DNSL D F +NF+V
Sbjct: 3 DLPDVPGGELPPHLQLQRTRVLCTSEAPTYTENIQYSGAYALMGVDNSLPFDSFRENFRV 62
Query: 347 ELIRLTEDDMEFDMIGIDASLANAFRRILISELPTMAIEKVLFANNTSVVQDEVLAHRLG 526
E++ + E D+EFD+IGIDA++ANAFRRILI+ELPTMAIEKVL ANNTSV+ DEVL+HRLG
Sbjct: 63 EIVSMDEHDIEFDLIGIDAAIANAFRRILIAELPTMAIEKVLIANNTSVIPDEVLSHRLG 122
Query: 527 LIPIKADPRLFEYMSENDTPNEKNTIVFKLHVQCKRGSPRITVKSDQLKWLPNGSEFLLA 706
LIP+K DPR F +MSE+D PNEKNT+VFKLHV C+R R TVK+D+LKWLPNGSE L
Sbjct: 123 LIPLKVDPRPFSFMSEHDEPNEKNTVVFKLHVSCERKGSRKTVKTDELKWLPNGSELRLE 182
Query: 707 TEXXXXXXXXXXXXXXXXXCGQASLPEFSDNPIAPKHDDIIIAKLGPGQEIELEAHAVKG 886
TE C Q S+PEFS + + P D+I IA+LGPGQEIELEAHAVKG
Sbjct: 183 TERPNINSTSKIQTYTSFNCSQDSMPEFSGSTLRPTSDEITIARLGPGQEIELEAHAVKG 242
Query: 887 IGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKADELVKKCPVNVFDIEDIGKGKKRATVA 1066
+GKTHAKWSPVATAWYR+LPE+ LL E++++KA ELVKKCP VFDIED G RATVA
Sbjct: 243 MGKTHAKWSPVATAWYRLLPEIALLDEIKNKKAKELVKKCPQKVFDIEDAGGDGIRATVA 302
Query: 1067 RPRACTLCRECIRGEDWEKHVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCERV 1246
RPR C+LCRECIR E+WEK V++RRVK+HFIF IESTGALPPEVLFTEAVKILE+KCE
Sbjct: 303 RPRNCSLCRECIRDEEWEKLVSVRRVKDHFIFKIESTGALPPEVLFTEAVKILEEKCENA 362
Query: 1247 IS 1252
++
Sbjct: 363 MA 364
>ref|XP_004498147.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Cicer arietinum]
Length = 388
Score = 521 bits (1341), Expect = e-145
Identities = 258/368 (70%), Positives = 303/368 (82%), Gaps = 2/368 (0%)
Frame = +2
Query: 164 LDMPDVPMGQLPPHLELQRTRVLCASDAPTHTENVEYSGAYAMMGIDNSLRSDDFFKNFK 343
+++ DVP +L PHLEL +TRV+C+ DAP HT+ + YSGAYA +G+DNS+R D F +NFK
Sbjct: 24 MNLEDVP-SKLSPHLELIKTRVVCSIDAPQHTDTINYSGAYAALGVDNSVRLDSFCQNFK 82
Query: 344 VELIRLTEDDMEFDMIGIDASLANAFRRILISELPTMAIEKVLFANNTSVVQDEVLAHRL 523
VE+ +LT+DD+EFDMIGID SLANAFRRILI+E+PTMAIE+V ANNTS++QDEVL+HRL
Sbjct: 83 VEVKKLTDDDIEFDMIGIDPSLANAFRRILIAEVPTMAIERVYIANNTSIIQDEVLSHRL 142
Query: 524 GLIPIKADPRLFEYMSE-NDTPNEKNTIVFKLHVQCKRGSPRITVKSDQLKWLPNGSEFL 700
GLIPI ADP LFEY NEKNTIVFKLHV+C++G PRITVKSD+LKWLPNGS+
Sbjct: 143 GLIPINADPTLFEYPDNAGGENNEKNTIVFKLHVRCEKGQPRITVKSDELKWLPNGSD-- 200
Query: 701 LATEXXXXXXXXXXXXXXXXXCGQASLPEFSDNPIAPKHDDIIIAKLGPGQEIELEAHAV 880
L + C Q SLPEFS P+ P + DII+AKLGPGQEIELE HAV
Sbjct: 201 LIADDTKPNAGSKPKTFTSFSCSQDSLPEFSKKPLGPTNPDIILAKLGPGQEIELEVHAV 260
Query: 881 KGIGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKADELVKKCPVNVFDIEDIGKGKKRAT 1060
KG+GKTHAKWSPVATAWYRMLPEVVL ++V DE ADELV KCPVNVFDIEDIGKG+KRAT
Sbjct: 261 KGVGKTHAKWSPVATAWYRMLPEVVLTEDVTDELADELVTKCPVNVFDIEDIGKGRKRAT 320
Query: 1061 VARPRACTLCRECIR-GEDWEKHVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKC 1237
V +PRACTLCRECIR G++WE V+LRRVK+HFIFTIESTGA+PPEVLFT+AVKILEDKC
Sbjct: 321 VVKPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPEVLFTQAVKILEDKC 380
Query: 1238 ERVISDLS 1261
ERVI++LS
Sbjct: 381 ERVITELS 388
>ref|XP_004488284.1| PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1-like
[Cicer arietinum]
Length = 388
Score = 520 bits (1339), Expect = e-144
Identities = 256/368 (69%), Positives = 304/368 (82%), Gaps = 2/368 (0%)
Frame = +2
Query: 164 LDMPDVPMGQLPPHLELQRTRVLCASDAPTHTENVEYSGAYAMMGIDNSLRSDDFFKNFK 343
+++ DVP +L PHLEL +TRV+C+ DAP HT+ + YSGAYA +G+DNS+R D F +NFK
Sbjct: 24 MNLEDVP-SKLSPHLELIKTRVVCSIDAPQHTDTINYSGAYAALGVDNSVRLDSFCRNFK 82
Query: 344 VELIRLTEDDMEFDMIGIDASLANAFRRILISELPTMAIEKVLFANNTSVVQDEVLAHRL 523
VE+ +LT+DD+EFDMIGID SLANAFRRILI+E+PTMAIE+V ANNTS++QDEVL+HRL
Sbjct: 83 VEVKKLTDDDIEFDMIGIDPSLANAFRRILIAEVPTMAIERVYIANNTSIIQDEVLSHRL 142
Query: 524 GLIPIKADPRLFEYMSE-NDTPNEKNTIVFKLHVQCKRGSPRITVKSDQLKWLPNGSEFL 700
GLIPI ADP LFEY NEKNTIVFKLHV+C++G PRI VKSD+LKWLPNGS+
Sbjct: 143 GLIPINADPTLFEYPDNAGGENNEKNTIVFKLHVRCEKGQPRIIVKSDELKWLPNGSD-- 200
Query: 701 LATEXXXXXXXXXXXXXXXXXCGQASLPEFSDNPIAPKHDDIIIAKLGPGQEIELEAHAV 880
L + C Q SLPEFS P+ P + DII+AKLGPGQEIELE HAV
Sbjct: 201 LIADDTKPNAGSKPKTFTSFSCSQDSLPEFSKRPLGPTYPDIILAKLGPGQEIELEVHAV 260
Query: 881 KGIGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKADELVKKCPVNVFDIEDIGKGKKRAT 1060
KG+GKTHAKWSPVATAWYRMLPEVVL+++V+DE ADELV KCPVNVFDIEDIGKG+KRAT
Sbjct: 261 KGVGKTHAKWSPVATAWYRMLPEVVLMEDVKDELADELVTKCPVNVFDIEDIGKGRKRAT 320
Query: 1061 VARPRACTLCRECIR-GEDWEKHVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKC 1237
V +PRACTLCRECIR G++WE V+LRRVK+HFIFTIESTGA+PP+VLFT+AVKILEDKC
Sbjct: 321 VVKPRACTLCRECIRGGKEWEDRVSLRRVKDHFIFTIESTGAIPPDVLFTQAVKILEDKC 380
Query: 1238 ERVISDLS 1261
ERVI++LS
Sbjct: 381 ERVITELS 388
>ref|XP_002300385.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847643|gb|EEE85190.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 390
Score = 515 bits (1326), Expect = e-143
Identities = 257/366 (70%), Positives = 296/366 (80%), Gaps = 1/366 (0%)
Frame = +2
Query: 167 DMPDVPMGQLPPHLELQRTRVLCASDAPTHTENVEYSGAYAMMGIDNSLRSDDFFKNFKV 346
++ DV GQLPPH+ Q TRV C DAPT+TE ++YSG+YA MG+DNSLR D F +NF++
Sbjct: 30 NLKDVERGQLPPHIRKQGTRVYCKPDAPTNTETLQYSGSYASMGVDNSLRLDSFRENFRI 89
Query: 347 ELIRLTEDDMEFDMIGIDASLANAFRRILISELPTMAIEKVLFANNTSVVQDEVLAHRLG 526
++I L +D MEFDMIGIDA++ANAFRRILISE+PTMAIEKV ANNTSV+QDEVLAHRLG
Sbjct: 90 KVIALDKDKMEFDMIGIDAAVANAFRRILISEVPTMAIEKVFIANNTSVIQDEVLAHRLG 149
Query: 527 LIPIKADPRLFEYMSENDTPNEKNTIVFKLHVQCKRGSPRITVKSDQLKWLPNGSEFLLA 706
LIPIK DPRLFEY+S NDTPNEKNTIV KLH +C RG PR +V S +LKWLPNGSEF
Sbjct: 150 LIPIKVDPRLFEYLSANDTPNEKNTIVLKLHARCNRGQPRCSVYSQELKWLPNGSEFAKE 209
Query: 707 TEXXXXXXXXXXXXXXXXXCGQASLPEFSDNPIAPKHDDIIIAKLGPGQEIELEAHAVKG 886
+E CGQ SLPEF+ NPI+ +DII+AKLGPGQEIELEAHAVKG
Sbjct: 210 SE----KPDSKPSTYTSFSCGQDSLPEFAGNPISTV-EDIILAKLGPGQEIELEAHAVKG 264
Query: 887 IGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKADELVKKCPVNVFDIEDIGKGKKRATVA 1066
+GKTHAKWSPV TAWYRM PEVVLL+ ++ E A+EL++KCP VFDIED G KK+A VA
Sbjct: 265 MGKTHAKWSPVGTAWYRMFPEVVLLENIKGEDAEELIRKCPSGVFDIEDTGNAKKKAIVA 324
Query: 1067 RPRACTLCRECIRG-EDWEKHVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCER 1243
RACTLCRECIRG E+WEK VAL RVK+HFIFTIESTGALPPEVLFTEAVKILE KCER
Sbjct: 325 DSRACTLCRECIRGDEEWEKRVALHRVKDHFIFTIESTGALPPEVLFTEAVKILEAKCER 384
Query: 1244 VISDLS 1261
VI++LS
Sbjct: 385 VITELS 390
>ref|XP_007146596.1| hypothetical protein PHAVU_006G053600g [Phaseolus vulgaris]
gi|561019819|gb|ESW18590.1| hypothetical protein
PHAVU_006G053600g [Phaseolus vulgaris]
Length = 386
Score = 511 bits (1317), Expect = e-142
Identities = 259/368 (70%), Positives = 299/368 (81%), Gaps = 2/368 (0%)
Frame = +2
Query: 164 LDMPDVPMGQLPPHLELQRTRVLCASDAPTHTENVEYSGAYAMMGIDNSLRSDDFFKNFK 343
L + DVP +LPPHLEL RTRVLC +DAP HT+ + YSGAY +G+DNS + D F +NFK
Sbjct: 22 LSLDDVP-SKLPPHLELFRTRVLCNNDAPIHTDTIHYSGAYGALGVDNSQQFDRFRENFK 80
Query: 344 VELIRLTEDDMEFDMIGIDASLANAFRRILISELPTMAIEKVLFANNTSVVQDEVLAHRL 523
VE+ RLT+ DMEFDMIGID ++ANAFRRILISE+PTMAIE+V ANNTS+VQDEVL+HRL
Sbjct: 81 VEVKRLTDSDMEFDMIGIDPAIANAFRRILISEVPTMAIERVYIANNTSIVQDEVLSHRL 140
Query: 524 GLIPIKADPRLFEYM-SENDTPNEKNTIVFKLHVQCKRGSPRITVKSDQLKWLPNGSEFL 700
GLIPI+ DPRLFEY S D NEKNTIVF+LH +C+ G PRITVKSD+LKWLPNGSE
Sbjct: 141 GLIPIRIDPRLFEYPDSAGDDNNEKNTIVFRLHERCRVGQPRITVKSDKLKWLPNGSE-- 198
Query: 701 LATEXXXXXXXXXXXXXXXXXCGQASLPEFSDNPIAPKHDDIIIAKLGPGQEIELEAHAV 880
L +E C Q SLPEFS N + DII+AKLGPGQEIELEAHAV
Sbjct: 199 LPSEDVKPNTSSKPKTFTSFTCSQNSLPEFSSNSLELTDSDIILAKLGPGQEIELEAHAV 258
Query: 881 KGIGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKADELVKKCPVNVFDIEDIGKGKKRAT 1060
KGIG+THAKWSPVATAWYRMLPEVVLL++ DE+A++LV KC NVFDIEDIGKGK+RAT
Sbjct: 259 KGIGRTHAKWSPVATAWYRMLPEVVLLEDFVDEQAEKLVNKCEPNVFDIEDIGKGKRRAT 318
Query: 1061 VARPRACTLCRECIR-GEDWEKHVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKC 1237
VARPR CTLCRECIR G++WE +++RRVK+HFIFTIESTGALPPEVLFTEAVKILEDKC
Sbjct: 319 VARPRNCTLCRECIRGGKEWEDRISIRRVKHHFIFTIESTGALPPEVLFTEAVKILEDKC 378
Query: 1238 ERVISDLS 1261
ERVI++ S
Sbjct: 379 ERVITEFS 386
>ref|XP_007205309.1| hypothetical protein PRUPE_ppa006811mg [Prunus persica]
gi|462400951|gb|EMJ06508.1| hypothetical protein
PRUPE_ppa006811mg [Prunus persica]
Length = 394
Score = 511 bits (1317), Expect = e-142
Identities = 255/366 (69%), Positives = 302/366 (82%), Gaps = 1/366 (0%)
Frame = +2
Query: 167 DMPDVPMGQLPPHLELQRTRVLCASDAPTHTENVEYSGAYAMMGIDNSLRSDDFFKNFKV 346
++ DVPMG+LP ++E QRTRV C +DAP HT+ +YSGAY+ M ++NS D+F NF+V
Sbjct: 31 NLSDVPMGRLPSNIEFQRTRVDCKADAPIHTDTFQYSGAYSSMRVENSFL-DNFCDNFRV 89
Query: 347 ELIRLTEDDMEFDMIGIDASLANAFRRILISELPTMAIEKVLFANNTSVVQDEVLAHRLG 526
E+IRLTED+MEFDMIGID +LANAFRRILISE+PTMAIEKVL ANNTSV+QDEVLAHRLG
Sbjct: 90 EVIRLTEDEMEFDMIGIDPALANAFRRILISEVPTMAIEKVLIANNTSVIQDEVLAHRLG 149
Query: 527 LIPIKADPRLFEYMSENDTPNEKNTIVFKLHVQCKRGSPRITVKSDQLKWLPNGSEFLLA 706
LIPIKADPRLFEY +EN+T +EKNTIVFKLHV C+R R++VKS +L WLPNGSEF L
Sbjct: 150 LIPIKADPRLFEY-AENNTASEKNTIVFKLHVCCERSGQRLSVKSKELIWLPNGSEFPLE 208
Query: 707 TEXXXXXXXXXXXXXXXXXCGQASLPEFSDNPIAPKHDDIIIAKLGPGQEIELEAHAVKG 886
++ C Q SLPEFS NPIAP DI+IA+LGPGQEIELEAHAVKG
Sbjct: 209 SQDSKTGSSSKPKTYTSFTCSQDSLPEFSSNPIAPALGDILIARLGPGQEIELEAHAVKG 268
Query: 887 IGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKADELVKKCPVNVFDIEDIGKGKKRATVA 1066
IGKTH+KWSPV WY+MLPE+VLL+++ED++A++LV CPV VFDIEDIGKGKKRATVA
Sbjct: 269 IGKTHSKWSPVTPVWYKMLPEIVLLEDIEDQQAEKLVAICPVKVFDIEDIGKGKKRATVA 328
Query: 1067 RPRACTLCRECIR-GEDWEKHVALRRVKNHFIFTIESTGALPPEVLFTEAVKILEDKCER 1243
RPRACTLCRECIR G+ WE ++L+R K+HFIFTIES+G PPEVL TEAVKILE+KC+R
Sbjct: 329 RPRACTLCRECIREGKGWENAISLQRKKDHFIFTIESSGVFPPEVLVTEAVKILEEKCDR 388
Query: 1244 VISDLS 1261
VISDLS
Sbjct: 389 VISDLS 394
>ref|NP_176261.1| RNA polymerase I subunit 43 [Arabidopsis thaliana]
gi|14423464|gb|AAK62414.1|AF386969_1 RNA polymerase
subunit (isoform B) [Arabidopsis thaliana]
gi|514324|gb|AAB00529.1| RNA polymerase subunit
[Arabidopsis thaliana] gi|2462755|gb|AAB71974.1| RNA
polymerase subunit (isoform B) [Arabidopsis thaliana]
gi|24899667|gb|AAN65048.1| RNA polymerase subunit
(isoform B) [Arabidopsis thaliana]
gi|332195585|gb|AEE33706.1| RNA polymerase I subunit 43
[Arabidopsis thaliana] gi|1586550|prf||2204246B RNA
polymerase
Length = 385
Score = 509 bits (1311), Expect = e-141
Identities = 258/383 (67%), Positives = 300/383 (78%), Gaps = 1/383 (0%)
Frame = +2
Query: 116 RISFDSRTLDMSRVSALDMPDVPMGQLPPHLELQRTRVLCASDAPTHTENVEYSGAYAMM 295
RI D + + D+PDVP G LPPHLELQRTRV+C D+ H + +SGAY+ M
Sbjct: 8 RIVTDEEKREAKNFNIFDLPDVPTG-LPPHLELQRTRVVCKKDSNIHPTAITFSGAYSSM 66
Query: 296 GIDNSLRSDDFFKNFKVELIRLTEDDMEFDMIGIDASLANAFRRILISELPTMAIEKVLF 475
G+DNS+R ++F ++FKV++I LTE DM FDMIG+ A +ANAFRRIL++ELP+MAIEKV
Sbjct: 67 GVDNSVRLENFSEDFKVDVISLTETDMVFDMIGVHAGIANAFRRILLAELPSMAIEKVYV 126
Query: 476 ANNTSVVQDEVLAHRLGLIPIKADPRLFEYMSENDTPNEKNTIVFKLHVQCKRGSPRITV 655
ANNTSV+QDEVLAHRLGLIPI ADPRLFEY+SEND PNEKNTIVFKLHV+C +G PR V
Sbjct: 127 ANNTSVIQDEVLAHRLGLIPIAADPRLFEYLSENDQPNEKNTIVFKLHVKCLKGDPRRKV 186
Query: 656 KSDQLKWLPNGSEFLLATEXXXXXXXXXXXXXXXXXCGQASLPEFSDNPIAPKHDDIIIA 835
+ +LKWLPNGSE + + Q S PEF++NPI P DI+IA
Sbjct: 187 LTSELKWLPNGSELIKESGGSTTTPKTYTSFNH----SQDSFPEFAENPIRPTLKDILIA 242
Query: 836 KLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLQEVEDEKADELVKKCPVN 1015
KLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLL+E E + A+ELVK CP
Sbjct: 243 KLGPGQEIELEAHAVKGIGKTHAKWSPVATAWYRMLPEVVLLKEFEGKHAEELVKVCPKK 302
Query: 1016 VFDIEDIGKGKKRATVARPRACTLCRECIR-GEDWEKHVALRRVKNHFIFTIESTGALPP 1192
VFDIED+G+G+KRATVARPR C+LCRECIR G +WE V LRRVKNHFIFTIESTG+ PP
Sbjct: 303 VFDIEDMGQGRKRATVARPRDCSLCRECIRDGVEWEDQVDLRRVKNHFIFTIESTGSQPP 362
Query: 1193 EVLFTEAVKILEDKCERVISDLS 1261
EVLF EAVKILEDKCERVIS+LS
Sbjct: 363 EVLFNEAVKILEDKCERVISELS 385