BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00004926
         (427 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007205588.1| hypothetical protein PRUPE_ppa008866mg [Prun...    97   2e-18
ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [...    94   2e-17
ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citr...    93   4e-17
ref|XP_007031140.1| Pseudouridine synthase family protein isofor...    93   4e-17
ref|XP_007031141.1| Pseudouridine synthase family protein isofor...    92   7e-17
gb|EYU37245.1| hypothetical protein MIMGU_mgv1a010081mg [Mimulus...    91   2e-16
ref|XP_004304865.1| PREDICTED: RNA pseudourine synthase 1-like [...    90   3e-16
ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like...    88   1e-15
ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [...    88   1e-15
ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like...    88   1e-15
ref|XP_006392435.1| hypothetical protein EUTSA_v10023586mg [Eutr...    86   5e-15
ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [...    86   7e-15
ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudour...    84   2e-14
ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [...    84   2e-14
gb|EPS60582.1| hypothetical protein M569_14220, partial [Genlise...    84   3e-14
gb|EXC51319.1| RNA pseudourine synthase 1 [Morus notabilis]            82   1e-13
gb|EXB98832.1| RNA pseudourine synthase 1 [Morus notabilis]            82   1e-13
gb|AAG51501.1|AC058785_4 unknown protein [Arabidopsis thaliana]        79   6e-13
gb|ACQ82580.1| At1g56345-like protein [Solanum hirtum] gi|229576...    79   6e-13
ref|NP_176031.2| RNA pseudourine synthase 1 [Arabidopsis thalian...    79   6e-13

>ref|XP_007205588.1| hypothetical protein PRUPE_ppa008866mg [Prunus persica]
           gi|462401230|gb|EMJ06787.1| hypothetical protein
           PRUPE_ppa008866mg [Prunus persica]
          Length = 316

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 48/65 (73%), Positives = 53/65 (81%)
 Frame = +3

Query: 228 MSKQIELNRAMSASSRSSLFQISPSDVVFEDQWLIVVNKPQGIYCESVLSSVPQFLTDSK 407
           +SK IEL RAMSASS+SSLF +S  DVVFEDQWLIVVNKPQG+YCESVL SVPQ L DS 
Sbjct: 33  ISKHIELARAMSASSKSSLFSLSRDDVVFEDQWLIVVNKPQGVYCESVLESVPQLLCDSA 92

Query: 408 AQTSP 422
              +P
Sbjct: 93  ESGTP 97


>ref|XP_002512503.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223548464|gb|EEF49955.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 321

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 48/84 (57%), Positives = 58/84 (69%)
 Frame = +3

Query: 171 NEEPQIQAYXXXXXXXXXXMSKQIELNRAMSASSRSSLFQISPSDVVFEDQWLIVVNKPQ 350
           N+   +Q Y          +SKQIEL RA+SASSRSSLF +S SDV++EDQWLI VNKPQ
Sbjct: 14  NDPLTLQNYPTPLSPPLPSISKQIELARALSASSRSSLFTLSRSDVLYEDQWLIAVNKPQ 73

Query: 351 GIYCESVLSSVPQFLTDSKAQTSP 422
           G+YCE+VL SVP+ L  S   T P
Sbjct: 74  GVYCETVLESVPRVLAASAELTDP 97


>ref|XP_006433526.1| hypothetical protein CICLE_v10001637mg [Citrus clementina]
           gi|567881937|ref|XP_006433527.1| hypothetical protein
           CICLE_v10001637mg [Citrus clementina]
           gi|557535648|gb|ESR46766.1| hypothetical protein
           CICLE_v10001637mg [Citrus clementina]
           gi|557535649|gb|ESR46767.1| hypothetical protein
           CICLE_v10001637mg [Citrus clementina]
          Length = 357

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 50/100 (50%), Positives = 65/100 (65%), Gaps = 6/100 (6%)
 Frame = +3

Query: 135 KTHFASSKTNGPNEE-----PQIQA-YXXXXXXXXXXMSKQIELNRAMSASSRSSLFQIS 296
           KT F+ +    P E      PQIQ  Y          +SK IEL RAMSASS+SSL+++S
Sbjct: 26  KTFFSLASMLNPTEPTCENAPQIQQNYPTPLSPPLPAISKDIELTRAMSASSKSSLYKLS 85

Query: 297 PSDVVFEDQWLIVVNKPQGIYCESVLSSVPQFLTDSKAQT 416
            SDV++ED+W + VNKPQG+YCESVL+SVP FL    A++
Sbjct: 86  RSDVLYEDEWFVAVNKPQGVYCESVLASVPCFLAGDSAES 125


>ref|XP_007031140.1| Pseudouridine synthase family protein isoform 1 [Theobroma cacao]
           gi|508719745|gb|EOY11642.1| Pseudouridine synthase
           family protein isoform 1 [Theobroma cacao]
          Length = 345

 Score = 92.8 bits (229), Expect = 4e-17
 Identities = 51/109 (46%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
 Frame = +3

Query: 81  PKIDRFRCNSSALTVMADKTHFASSK-TNGPNEEPQIQAYXXXXXXXXXXMSKQIELNRA 257
           P+   F C    L+       F   K +  PN     Q Y          +SK IEL RA
Sbjct: 7   PQQSFFLCCPKLLSKFPKTLLFLCPKMSTNPNSH---QNYPTPLSPPLPSISKDIELARA 63

Query: 258 MSASSRSSLFQISPSDVVFEDQWLIVVNKPQGIYCESVLSSVPQFLTDS 404
           M+ASS+SSLF++S SD+++ED+WLI VNKPQGIYC+SVL+S+P+FL+DS
Sbjct: 64  MTASSKSSLFELSRSDILYEDEWLIAVNKPQGIYCDSVLASIPRFLSDS 112


>ref|XP_007031141.1| Pseudouridine synthase family protein isoform 2 [Theobroma cacao]
           gi|508719746|gb|EOY11643.1| Pseudouridine synthase
           family protein isoform 2 [Theobroma cacao]
          Length = 313

 Score = 92.0 bits (227), Expect = 7e-17
 Identities = 41/59 (69%), Positives = 55/59 (93%)
 Frame = +3

Query: 228 MSKQIELNRAMSASSRSSLFQISPSDVVFEDQWLIVVNKPQGIYCESVLSSVPQFLTDS 404
           +SK IEL RAM+ASS+SSLF++S SD+++ED+WLI VNKPQGIYC+SVL+S+P+FL+DS
Sbjct: 22  ISKDIELARAMTASSKSSLFELSRSDILYEDEWLIAVNKPQGIYCDSVLASIPRFLSDS 80


>gb|EYU37245.1| hypothetical protein MIMGU_mgv1a010081mg [Mimulus guttatus]
          Length = 323

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 45/94 (47%), Positives = 61/94 (64%), Gaps = 5/94 (5%)
 Frame = +3

Query: 147 ASSKTNGPNEEPQ-----IQAYXXXXXXXXXXMSKQIELNRAMSASSRSSLFQISPSDVV 311
           A S+ N PN +P+     +Q Y          +SK +ELNRA++ASS+SSLF +S  DV+
Sbjct: 3   AESRLNSPNTQPENAPQSLQNYPVPLSPPPPLISKNVELNRALTASSKSSLFSLSRKDVL 62

Query: 312 FEDQWLIVVNKPQGIYCESVLSSVPQFLTDSKAQ 413
           FED+WLI VNKP GIYCE++LSSV   L   + +
Sbjct: 63  FEDEWLIAVNKPNGIYCETILSSVQILLNTDQVK 96


>ref|XP_004304865.1| PREDICTED: RNA pseudourine synthase 1-like [Fragaria vesca subsp.
           vesca]
          Length = 347

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 52/105 (49%), Positives = 62/105 (59%), Gaps = 5/105 (4%)
 Frame = +3

Query: 105 NSSALTVMADKTHFASSKTNGPNEEPQ-----IQAYXXXXXXXXXXMSKQIELNRAMSAS 269
           N   LT      +F  S T       Q      Q Y          +SK +EL RAMSAS
Sbjct: 17  NPKTLTSFPKPFNFLRSVTMSDQPSSQNALQISQNYPVPLSPPLPLISKNMELARAMSAS 76

Query: 270 SRSSLFQISPSDVVFEDQWLIVVNKPQGIYCESVLSSVPQFLTDS 404
           S+SSLF +S +DVV+EDQWLIVVNKPQGIYCE+VL SVP+ L +S
Sbjct: 77  SKSSLFTLSRNDVVYEDQWLIVVNKPQGIYCETVLESVPKLLAES 121


>ref|XP_006344754.1| PREDICTED: RNA pseudouridine synthase 1-like [Solanum tuberosum]
          Length = 332

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 41/64 (64%), Positives = 52/64 (81%)
 Frame = +3

Query: 228 MSKQIELNRAMSASSRSSLFQISPSDVVFEDQWLIVVNKPQGIYCESVLSSVPQFLTDSK 407
           +SK IE NRA++ASS+S+LF +S S V+FED+W+I VNKPQGIYCESVLSS+P  L D+ 
Sbjct: 58  LSKDIEPNRALTASSKSALFSLSRSHVIFEDEWIIAVNKPQGIYCESVLSSLPDLLNDTG 117

Query: 408 AQTS 419
           A  S
Sbjct: 118 ANVS 121


>ref|XP_004230301.1| PREDICTED: RNA pseudourine synthase 1-like [Solanum lycopersicum]
          Length = 308

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 41/64 (64%), Positives = 52/64 (81%)
 Frame = +3

Query: 228 MSKQIELNRAMSASSRSSLFQISPSDVVFEDQWLIVVNKPQGIYCESVLSSVPQFLTDSK 407
           +SK IE NRA++ASS+S+LF +S S V+FED+W+I VNKPQGIYCESVLSS+P  L D+ 
Sbjct: 28  LSKDIEPNRALTASSKSALFSLSRSHVIFEDEWIIAVNKPQGIYCESVLSSLPDLLNDTG 87

Query: 408 AQTS 419
           A  S
Sbjct: 88  ANVS 91


>ref|XP_006472187.1| PREDICTED: RNA pseudouridine synthase 1-like [Citrus sinensis]
          Length = 324

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 40/63 (63%), Positives = 53/63 (84%)
 Frame = +3

Query: 228 MSKQIELNRAMSASSRSSLFQISPSDVVFEDQWLIVVNKPQGIYCESVLSSVPQFLTDSK 407
           +SK IEL RAMSASS+SSL+++S SDV++ED+WL+ VNKPQG+YCESVL+SVP  L    
Sbjct: 30  ISKDIELTRAMSASSKSSLYKLSRSDVLYEDEWLVAVNKPQGVYCESVLASVPCLLAGDS 89

Query: 408 AQT 416
           A++
Sbjct: 90  AES 92


>ref|XP_006392435.1| hypothetical protein EUTSA_v10023586mg [Eutrema salsugineum]
           gi|557088941|gb|ESQ29721.1| hypothetical protein
           EUTSA_v10023586mg [Eutrema salsugineum]
          Length = 333

 Score = 85.9 bits (211), Expect = 5e-15
 Identities = 47/109 (43%), Positives = 64/109 (58%), Gaps = 6/109 (5%)
 Frame = +3

Query: 102 CNSSALTVMADKTHFASS------KTNGPNEEPQIQAYXXXXXXXXXXMSKQIELNRAMS 263
           C S +      K +FA S      + + P      Q Y          +SK IEL RAM 
Sbjct: 12  CFSFSSNTKLTKPYFAVSIKAMEARNDLPTTVDTNQNYPKPISAPPPPISKDIELKRAME 71

Query: 264 ASSRSSLFQISPSDVVFEDQWLIVVNKPQGIYCESVLSSVPQFLTDSKA 410
           ASS+SSLF ++ +DV++ED+WL+ VNKP+GIYCESVLSS P+ + DS +
Sbjct: 72  ASSKSSLFNLTRNDVLYEDEWLMAVNKPKGIYCESVLSSAPKVIVDSSS 120


>ref|XP_002278016.2| PREDICTED: RNA pseudourine synthase 1-like [Vitis vinifera]
          Length = 348

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 48/100 (48%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
 Frame = +3

Query: 129 ADKTHFASSKTNGPNEE--PQIQA-YXXXXXXXXXXMSKQIELNRAMSASSRSSLFQISP 299
           A   H   ++   PN +  PQI   Y          +SK IE +RAMSASSRSSLF +  
Sbjct: 29  ASLPHTTMAEYIDPNSKDAPQILTNYPKPISPPLPAISKHIEQSRAMSASSRSSLFSLCR 88

Query: 300 SDVVFEDQWLIVVNKPQGIYCESVLSSVPQFLTDSKAQTS 419
           SD++FEDQWL+ VNKPQG+YCE++L SV + L DS    S
Sbjct: 89  SDILFEDQWLMAVNKPQGVYCETILLSVSRMLDDSDGHDS 128


>ref|XP_004158751.1| PREDICTED: LOW QUALITY PROTEIN: RNA pseudourine synthase 1-like
           [Cucumis sativus]
          Length = 366

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 38/59 (64%), Positives = 51/59 (86%)
 Frame = +3

Query: 228 MSKQIELNRAMSASSRSSLFQISPSDVVFEDQWLIVVNKPQGIYCESVLSSVPQFLTDS 404
           +SK +EL RAM ASS+SSL+ +S +DV++ED+WLI VNKPQGIYCE+VL++VP+ L DS
Sbjct: 68  ISKNLELARAMVASSKSSLYALSANDVIYEDEWLIAVNKPQGIYCENVLAAVPRLLGDS 126


>ref|XP_004144814.1| PREDICTED: RNA pseudourine synthase 1-like [Cucumis sativus]
          Length = 366

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 38/59 (64%), Positives = 51/59 (86%)
 Frame = +3

Query: 228 MSKQIELNRAMSASSRSSLFQISPSDVVFEDQWLIVVNKPQGIYCESVLSSVPQFLTDS 404
           +SK +EL RAM ASS+SSL+ +S +DV++ED+WLI VNKPQGIYCE+VL++VP+ L DS
Sbjct: 68  ISKNLELARAMVASSKSSLYALSANDVIYEDEWLIAVNKPQGIYCENVLAAVPRLLGDS 126


>gb|EPS60582.1| hypothetical protein M569_14220, partial [Genlisea aurea]
          Length = 307

 Score = 83.6 bits (205), Expect = 3e-14
 Identities = 39/63 (61%), Positives = 51/63 (80%)
 Frame = +3

Query: 228 MSKQIELNRAMSASSRSSLFQISPSDVVFEDQWLIVVNKPQGIYCESVLSSVPQFLTDSK 407
           +SK +EL+RA++ASS S+LF +S +DV+FED+WLI VNKP GIYCES+LSSV  FL    
Sbjct: 35  ISKDVELSRALTASSSSALFSLSENDVLFEDEWLIAVNKPPGIYCESILSSVRTFLNSVP 94

Query: 408 AQT 416
           A+T
Sbjct: 95  ART 97


>gb|EXC51319.1| RNA pseudourine synthase 1 [Morus notabilis]
          Length = 319

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 40/59 (67%), Positives = 49/59 (83%)
 Frame = +3

Query: 228 MSKQIELNRAMSASSRSSLFQISPSDVVFEDQWLIVVNKPQGIYCESVLSSVPQFLTDS 404
           +SK +EL+RAMSASS+SSLF IS +D VFED+ L+ VNKPQGIYCESV  SV + L+DS
Sbjct: 33  VSKDVELSRAMSASSKSSLFSISRNDFVFEDECLVAVNKPQGIYCESVFDSVRKVLSDS 91


>gb|EXB98832.1| RNA pseudourine synthase 1 [Morus notabilis]
          Length = 319

 Score = 81.6 bits (200), Expect = 1e-13
 Identities = 40/59 (67%), Positives = 49/59 (83%)
 Frame = +3

Query: 228 MSKQIELNRAMSASSRSSLFQISPSDVVFEDQWLIVVNKPQGIYCESVLSSVPQFLTDS 404
           +SK +EL+RAMSASS+SSLF IS +D VFED+ L+ VNKPQGIYCESV  SV + L+DS
Sbjct: 33  VSKDVELSRAMSASSKSSLFSISRNDFVFEDECLVAVNKPQGIYCESVFDSVRKVLSDS 91


>gb|AAG51501.1|AC058785_4 unknown protein [Arabidopsis thaliana]
          Length = 293

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 34/62 (54%), Positives = 50/62 (80%)
 Frame = +3

Query: 228 MSKQIELNRAMSASSRSSLFQISPSDVVFEDQWLIVVNKPQGIYCESVLSSVPQFLTDSK 407
           +SK IEL RAM ASS+SSLF ++  D+++ED++L+ VNKP+G+YCE+VL S PQ + DS 
Sbjct: 22  ISKDIELRRAMEASSKSSLFNLTRDDILYEDEYLMAVNKPKGVYCEAVLRSAPQIVLDSS 81

Query: 408 AQ 413
           ++
Sbjct: 82  SE 83


>gb|ACQ82580.1| At1g56345-like protein [Solanum hirtum] gi|229576382|gb|ACQ82581.1|
           At1g56345-like protein [Solanum quitoense]
           gi|229576384|gb|ACQ82582.1| At1g56345-like protein
           [Solanum quitoense]
          Length = 56

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 36/54 (66%), Positives = 46/54 (85%)
 Frame = +3

Query: 243 ELNRAMSASSRSSLFQISPSDVVFEDQWLIVVNKPQGIYCESVLSSVPQFLTDS 404
           E +RA++ASS+S+LF +S S V+FED+WLI VNKPQGIYCESVLSS+P  L D+
Sbjct: 3   EPHRALTASSKSALFSLSRSHVIFEDEWLIAVNKPQGIYCESVLSSLPDLLNDT 56


>ref|NP_176031.2| RNA pseudourine synthase 1 [Arabidopsis thaliana]
           gi|75140931|sp|Q7XA65.1|PUS1_ARATH RecName: Full=RNA
           pseudouridine synthase 1; AltName: Full=RNA
           pseudouridylate synthase 1; AltName: Full=RNA-uridine
           isomerase 1 gi|33589806|gb|AAQ22669.1| At1g56345
           [Arabidopsis thaliana] gi|110736414|dbj|BAF00174.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332195260|gb|AEE33381.1| RNA pseudourine synthase 1
           [Arabidopsis thaliana]
          Length = 322

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 34/62 (54%), Positives = 50/62 (80%)
 Frame = +3

Query: 228 MSKQIELNRAMSASSRSSLFQISPSDVVFEDQWLIVVNKPQGIYCESVLSSVPQFLTDSK 407
           +SK IEL RAM ASS+SSLF ++  D+++ED++L+ VNKP+G+YCE+VL S PQ + DS 
Sbjct: 51  ISKDIELRRAMEASSKSSLFNLTRDDILYEDEYLMAVNKPKGVYCEAVLRSAPQIVLDSS 110

Query: 408 AQ 413
           ++
Sbjct: 111 SE 112