BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00004582
         (1173 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]     551   e-154
ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   551   e-154
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...   550   e-154
ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   550   e-154
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     549   e-154
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   548   e-153
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    548   e-153
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    547   e-153
ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   546   e-153
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   546   e-153
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca...   545   e-152
ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco...   544   e-152
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   543   e-152
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...   543   e-152
gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]   542   e-151
ref|XP_007137030.1| hypothetical protein PHAVU_009G093700g [Phas...   538   e-150
ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   538   e-150
ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis...   538   e-150
gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus...   536   e-150
ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   536   e-150

>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score =  551 bits (1421), Expect = e-154
 Identities = 263/391 (67%), Positives = 314/391 (80%), Gaps = 1/391 (0%)
 Frame = +3

Query: 3    QCFIQVSTPSLENCFSKHGPEFSESVKNFHVIEGTVVIAKNPCLHPGDIRILEAVDVPGL 182
            QCFIQVS+PSLENCF KHGP+FS+  KN  V++G VVIAKNPCLHPGD+RILEAVDVPGL
Sbjct: 780  QCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGL 839

Query: 183  RHLVDCLVFPQKGPRPHTDEASGSDLDGDLYFVTWDEELIPPSKEGWLPMQYAPAEAKKL 362
             HL DCLVFPQKG RPH++EASGSDLDGDLYFVTWDE LIPPSK+ W+PM Y PAE K++
Sbjct: 840  HHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQM 899

Query: 363  QRKVNNLDIIKFFTESMLSEHLGTICNAHVVHADLSENGALDEKCIKLAKLAAVAVDFPK 542
             R+VN++DII FF+++M+ E LG ICNAHVVHADLSE GALDEKC+KLA+LAA+AVDFPK
Sbjct: 900  GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959

Query: 543  TGKLVTMPSYLKPKVYPDFMGKPEFQSYESNKILGKLYRKVKDASDGEIPISPELS-APQ 719
            TGKLVTMP  LKPK+YPDFMGK EFQSY+S KILGKLYR+VKD  D E  +S  L   P 
Sbjct: 960  TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPN 1019

Query: 720  DIPYDIDLEVPGSEDFIVDSWNRKCAYDRQLQALLGQFKVSTEAEVVTGHIWSLYAYNNW 899
            DIPYD  LE+PGS  FI D+WN KC+YD QL  LLGQ+KV+ E EVVTGHIWS+  Y+  
Sbjct: 1020 DIPYDSSLEIPGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079

Query: 900  KQGQVKEKLIHAYRALNKDFKCAFENLGQDFEQFSKEDKNLVYERKASAWYQVTYHPQWV 1079
            KQG++KE+L HAY  L K+F+  FE +  DF+    ++KN +YERKASAWYQVTY+P WV
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYNPHWV 1139

Query: 1080 KKSFKIRELRGEGASTMLSFAWIPVEYLVRI 1172
             +S +++      ++ MLSFAWI  +YL RI
Sbjct: 1140 ARSLELQLPDAVSSTVMLSFAWIAADYLARI 1170


>ref|XP_003522618.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
            max] gi|571449461|ref|XP_006578148.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
            max]
          Length = 1204

 Score =  551 bits (1419), Expect = e-154
 Identities = 264/396 (66%), Positives = 311/396 (78%), Gaps = 7/396 (1%)
 Frame = +3

Query: 3    QCFIQVSTPSLENCFSKHGPEFSESVKNFHVIEGTVVIAKNPCLHPGDIRILEAVDVPGL 182
            QCF+QVSTPSLENCFSKHG  FSE+ KN HV++G VVIAKNPCLHPGD+R+LEAVD P L
Sbjct: 780  QCFVQVSTPSLENCFSKHGSRFSET-KNLHVVKGFVVIAKNPCLHPGDVRVLEAVDAPDL 838

Query: 183  RHLVDCLVFPQKGPRPHTDEASGSDLDGDLYFVTWDEELIPPSKEGWLPMQYAPAEAKKL 362
             HL DCLVFPQKG RPHT+EASGSDLDGDLYFVTWDE LIPPSK  W+PM+YAP E+K L
Sbjct: 839  HHLNDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMEYAPQESKLL 898

Query: 363  QRKVNNLDIIKFFTESMLSEHLGTICNAHVVHADLSENGALDEKCIKLAKLAAVAVDFPK 542
             R+V   DII+FF  +M++EHLG ICNAHVVHAD S+ GALDEKCI LA+LAA AVDFPK
Sbjct: 899  TRQVMTRDIIEFFVRNMVNEHLGAICNAHVVHADSSDYGALDEKCIHLAELAATAVDFPK 958

Query: 543  TGKLVTMPSYLKPKVYPDFMGKPEFQSYESNKILGKLYRKVKDASDGEIPISPELSAPQD 722
            TGKLVTMP +LKPK+YPDFMGK   QSY SNKILG+LYR +KDA D +I          D
Sbjct: 959  TGKLVTMPPHLKPKLYPDFMGKERHQSYRSNKILGRLYRHIKDAYDEDIEAPYLNFVTGD 1018

Query: 723  IPYDIDLEVPGSEDFIVDSWNRKCAYDRQLQALLGQFKVSTEAEVVTGHIWSLYAYNNWK 902
            IPYD DLEVPGS DFI D+W +KC+YD QL  L+GQ+KV  E EVVTG IWS+  YN+ K
Sbjct: 1019 IPYDKDLEVPGSADFIADAWEQKCSYDGQLSGLIGQYKVKREEEVVTGQIWSMPKYNSRK 1078

Query: 903  QGQVKEKLIHAYRALNKDFKCAFENLGQDFEQFSKEDKNLVYERKASAWYQVTYHPQWVK 1082
            QG++KE+L H+Y AL K+F+  FE L  D  + S+E+KNL+YE+KASAWYQVTYHP+WVK
Sbjct: 1079 QGELKERLKHSYSALKKEFRYTFEKLNSDVGELSEEEKNLLYEQKASAWYQVTYHPEWVK 1138

Query: 1083 KSFKIRELRGE-------GASTMLSFAWIPVEYLVR 1169
            KS  +++   E       G++ MLSF WI V+YL R
Sbjct: 1139 KSLDLQDKSSENQEADSLGSTVMLSFPWIAVDYLAR 1174


>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score =  550 bits (1417), Expect = e-154
 Identities = 263/391 (67%), Positives = 314/391 (80%), Gaps = 1/391 (0%)
 Frame = +3

Query: 3    QCFIQVSTPSLENCFSKHGPEFSESVKNFHVIEGTVVIAKNPCLHPGDIRILEAVDVPGL 182
            QCFIQVS+PSLENCF KHGP+FS+  KN  V++G VVIAKNPCLHPGD+RILEAVDVPGL
Sbjct: 780  QCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGL 839

Query: 183  RHLVDCLVFPQKGPRPHTDEASGSDLDGDLYFVTWDEELIPPSKEGWLPMQYAPAEAKKL 362
             HL DCLVFPQKG RPH++EASGSDLDGDLYFVTWDE LIPPSK+ W+PM Y PAE K+L
Sbjct: 840  HHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQL 899

Query: 363  QRKVNNLDIIKFFTESMLSEHLGTICNAHVVHADLSENGALDEKCIKLAKLAAVAVDFPK 542
             R+VN++DII FF+++M+ E LG ICNAHVVHADLSE GALDEKC+KLA+LAA+AVDFPK
Sbjct: 900  GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959

Query: 543  TGKLVTMPSYLKPKVYPDFMGKPEFQSYESNKILGKLYRKVKDASDGEIPISPELS-APQ 719
            TGKLVTMP  LKPK+YPDFMGK EFQSY+S KILGKLYR+VKD  D E  +S  L   P 
Sbjct: 960  TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDTEGEVSAGLELVPN 1019

Query: 720  DIPYDIDLEVPGSEDFIVDSWNRKCAYDRQLQALLGQFKVSTEAEVVTGHIWSLYAYNNW 899
            DIPYD  LE+PGS  F+ D+WN KC+YD QL  LLGQ+KV+ E EVVTGHIWS+  Y+  
Sbjct: 1020 DIPYDSSLEIPGSTVFMGDAWNCKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079

Query: 900  KQGQVKEKLIHAYRALNKDFKCAFENLGQDFEQFSKEDKNLVYERKASAWYQVTYHPQWV 1079
            KQG++KE+L HAY  L K+F+  FE +  DF+    ++KN +YERKASAWYQVTY+P WV
Sbjct: 1080 KQGELKERLKHAYNMLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWV 1139

Query: 1080 KKSFKIRELRGEGASTMLSFAWIPVEYLVRI 1172
             +S +++      ++ MLSFAWI  +YL RI
Sbjct: 1140 ARSLELQLPDAVSSTVMLSFAWIAADYLARI 1170


>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1200

 Score =  550 bits (1417), Expect = e-154
 Identities = 258/391 (65%), Positives = 315/391 (80%), Gaps = 1/391 (0%)
 Frame = +3

Query: 3    QCFIQVSTPSLENCFSKHGPEFSESVKNFHVIEGTVVIAKNPCLHPGDIRILEAVDVPGL 182
            QCFIQVS  SLE CF KHG +FSE+ KN  VI+GTVVIAKNPCLHPGD+R+LEAVDVPGL
Sbjct: 783  QCFIQVSNSSLEKCFMKHGAKFSEAEKNLQVIKGTVVIAKNPCLHPGDVRVLEAVDVPGL 842

Query: 183  RHLVDCLVFPQKGPRPHTDEASGSDLDGDLYFVTWDEELIPPSKEGWLPMQYAPAEAKKL 362
             HL DCLVFPQKG RPHT+EASGSDLDGDLYFVTWDE LIPPSK  W+PMQY  AEAK L
Sbjct: 843  HHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKLL 902

Query: 363  QRKVNNLDIIKFFTESMLSEHLGTICNAHVVHADLSENGALDEKCIKLAKLAAVAVDFPK 542
             R VN+ DII+FF ++M++++LG ICNAHVVHADLSE GA D+ C+ LA+LAA AVDFPK
Sbjct: 903  ARPVNHQDIIEFFAKNMVNDNLGAICNAHVVHADLSEYGATDKNCLTLAELAATAVDFPK 962

Query: 543  TGKLVTMPSYLKPKVYPDFMGKPEFQSYESNKILGKLYRKVKDASDGEIPISPELS-APQ 719
            TGK+V+MP YLKPK+YPDFMGK E+QSY+S KILG+LYR++KDA D ++  S EL+  P 
Sbjct: 963  TGKVVSMPPYLKPKMYPDFMGKEEYQSYKSEKILGRLYRQIKDAYDEDVAASSELNLVPG 1022

Query: 720  DIPYDIDLEVPGSEDFIVDSWNRKCAYDRQLQALLGQFKVSTEAEVVTGHIWSLYAYNNW 899
            DIPYD DLEV G+ D+I D+W++KC+YD QL  LL Q+KV  E EVVTGHIWS+  Y++ 
Sbjct: 1023 DIPYDSDLEVVGASDYISDAWDQKCSYDGQLNGLLSQYKVKREEEVVTGHIWSMPKYSSR 1082

Query: 900  KQGQVKEKLIHAYRALNKDFKCAFENLGQDFEQFSKEDKNLVYERKASAWYQVTYHPQWV 1079
            KQG++K++L H+Y +L K+F+  FE +  +FEQ    +KN +YE+KASAWYQV YHP WV
Sbjct: 1083 KQGELKDRLKHSYNSLKKEFRQIFEKMDLEFEQLEDGEKNKLYEQKASAWYQVVYHPHWV 1142

Query: 1080 KKSFKIRELRGEGASTMLSFAWIPVEYLVRI 1172
            KKS ++++  G G S MLSFAWI  +YL RI
Sbjct: 1143 KKSLELQDPDGAGTSVMLSFAWIAADYLARI 1173


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  549 bits (1415), Expect = e-154
 Identities = 263/391 (67%), Positives = 312/391 (79%), Gaps = 1/391 (0%)
 Frame = +3

Query: 3    QCFIQVSTPSLENCFSKHGPEFSESVKNFHVIEGTVVIAKNPCLHPGDIRILEAVDVPGL 182
            QCFIQVS+PSLENCF KHGP+FS+  KN  V++G VVIAKNPCLHPGD+RILEAVDVP L
Sbjct: 780  QCFIQVSSPSLENCFVKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSL 839

Query: 183  RHLVDCLVFPQKGPRPHTDEASGSDLDGDLYFVTWDEELIPPSKEGWLPMQYAPAEAKKL 362
             HL DCLVFPQKG RPH++EASGSDLDGDLYFVTWDE LIPPSK+ W+PM Y PAE K+L
Sbjct: 840  SHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQL 899

Query: 363  QRKVNNLDIIKFFTESMLSEHLGTICNAHVVHADLSENGALDEKCIKLAKLAAVAVDFPK 542
             R+VN++DII FF+++M+ E LG ICNAHVVHADLSE GALDEKC+KLA+LAA+AVDFPK
Sbjct: 900  GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959

Query: 543  TGKLVTMPSYLKPKVYPDFMGKPEFQSYESNKILGKLYRKVKDASDGEIPISPELS-APQ 719
            TGKLVTMP  LKPK+YPDFMGK EFQSY+S KILGKLYR+VKD  D E  +S  L   P+
Sbjct: 960  TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPK 1019

Query: 720  DIPYDIDLEVPGSEDFIVDSWNRKCAYDRQLQALLGQFKVSTEAEVVTGHIWSLYAYNNW 899
            DIPYD  LE+ GS  FI D+WN KC+YD QL  LLGQ+KV+ E EVVTG+IWS+  YN  
Sbjct: 1020 DIPYDTTLEILGSTTFIDDAWNSKCSYDGQLNGLLGQYKVNREEEVVTGYIWSMPKYNAK 1079

Query: 900  KQGQVKEKLIHAYRALNKDFKCAFENLGQDFEQFSKEDKNLVYERKASAWYQVTYHPQWV 1079
            KQG++KE+L HAY  L K+F+  FE +  DF+    ++KN +YERKASAWYQVTYHP WV
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYHPHWV 1139

Query: 1080 KKSFKIRELRGEGASTMLSFAWIPVEYLVRI 1172
             +S +++       + MLSFAWI  +YL RI
Sbjct: 1140 ARSLELQLADAVSNTVMLSFAWIAADYLARI 1170


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score =  548 bits (1413), Expect = e-153
 Identities = 264/397 (66%), Positives = 317/397 (79%), Gaps = 7/397 (1%)
 Frame = +3

Query: 3    QCFIQVSTPSLENCFSKHGPEFSESVKNFHVIEGTVVIAKNPCLHPGDIRILEAVDVPGL 182
            QCFIQVS PSLE+CF KHG  FSES K   V++GTVV+AKNPCLHPGDIRILEAVD P L
Sbjct: 780  QCFIQVSNPSLESCFWKHGSRFSESKKKLQVVKGTVVVAKNPCLHPGDIRILEAVDAPEL 839

Query: 183  RHLVDCLVFPQKGPRPHTDEASGSDLDGDLYFVTWDEELIPPSKEGWLPMQYAPAEAKKL 362
             HL DCLVFPQKG RPHT+EASGSDLDGDLYFVTWDE LIPPSK  WLPMQY  AEAK+L
Sbjct: 840  HHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWLPMQYDAAEAKQL 899

Query: 363  QRKVNNLDIIKFFTESMLSEHLGTICNAHVVHADLSENGALDEKCIKLAKLAAVAVDFPK 542
             R VN+ DII FF ++M++E+LG ICNAHVVHADLSE GALDE CIKLA+LAA AVDFPK
Sbjct: 900  NRPVNHQDIIDFFAKNMVNENLGAICNAHVVHADLSEYGALDENCIKLAELAATAVDFPK 959

Query: 543  TGKLVTMPSYLKPKVYPDFMGKPEFQSYESNKILGKLYRKVK------DASDGEIPISPE 704
            TGKLVTMP +LKPK+YPDFMGK ++QSY SNKILG+LYR+VK      D  D +   S E
Sbjct: 960  TGKLVTMPPHLKPKLYPDFMGKEDYQSYNSNKILGRLYRQVKDDYNDDDDDDDDAATSSE 1019

Query: 705  LSAPQ-DIPYDIDLEVPGSEDFIVDSWNRKCAYDRQLQALLGQFKVSTEAEVVTGHIWSL 881
            L+  + DIPYD DLEV GS D+I+D+W++KC+YD QL+ LL Q+KV  E EVVTGHIWS+
Sbjct: 1020 LNLVRGDIPYDKDLEVSGSSDYILDAWDQKCSYDGQLKGLLAQYKVKREEEVVTGHIWSM 1079

Query: 882  YAYNNWKQGQVKEKLIHAYRALNKDFKCAFENLGQDFEQFSKEDKNLVYERKASAWYQVT 1061
               N+ KQG++KE+L  +Y +L K+F+  FE +  DFEQ ++++KNL+YE+KASAWYQV 
Sbjct: 1080 PKCNSRKQGELKERLKQSYHSLKKEFRQVFEKMDSDFEQLTEDEKNLLYEQKASAWYQVA 1139

Query: 1062 YHPQWVKKSFKIRELRGEGASTMLSFAWIPVEYLVRI 1172
            YHP+WV KS +++E    G ++MLSFAWI  +YL RI
Sbjct: 1140 YHPKWVNKSMELQEPDAAGCASMLSFAWIAADYLARI 1176


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  548 bits (1411), Expect = e-153
 Identities = 262/391 (67%), Positives = 313/391 (80%), Gaps = 1/391 (0%)
 Frame = +3

Query: 3    QCFIQVSTPSLENCFSKHGPEFSESVKNFHVIEGTVVIAKNPCLHPGDIRILEAVDVPGL 182
            QCFIQVS+PSLENCF KHGP+FS+  KN  V++G VVIAKNPCLHPGD+RILEAVDVP L
Sbjct: 780  QCFIQVSSPSLENCFVKHGPKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSL 839

Query: 183  RHLVDCLVFPQKGPRPHTDEASGSDLDGDLYFVTWDEELIPPSKEGWLPMQYAPAEAKKL 362
             HL DCLVFPQKG RPH++EASGSDLDGDLYFVTWDE LIPPSK+ W+PM Y PAE K+L
Sbjct: 840  SHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQL 899

Query: 363  QRKVNNLDIIKFFTESMLSEHLGTICNAHVVHADLSENGALDEKCIKLAKLAAVAVDFPK 542
             R+VN++DII FF+++M+ E LG ICNAHVVHADLSE GALDEKC+KLA+LAA+AVDFPK
Sbjct: 900  GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959

Query: 543  TGKLVTMPSYLKPKVYPDFMGKPEFQSYESNKILGKLYRKVKDASDGEIPISPELS-APQ 719
            TGKLVTMP  LKPK+YPDFMGK EFQSY+S KILGKLYR+VKD  D E  +S  L   P+
Sbjct: 960  TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPK 1019

Query: 720  DIPYDIDLEVPGSEDFIVDSWNRKCAYDRQLQALLGQFKVSTEAEVVTGHIWSLYAYNNW 899
            DIPYD  L +PGS  FI D+WN KC+YD QL  LLGQ+KV+ E EVVTGHIWS+  Y+  
Sbjct: 1020 DIPYDTTLVIPGSTVFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079

Query: 900  KQGQVKEKLIHAYRALNKDFKCAFENLGQDFEQFSKEDKNLVYERKASAWYQVTYHPQWV 1079
            KQG++KE+L HAY  L K+F+  FE +  DF+    ++KN +YERKASAWYQVTY+P WV
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYNPHWV 1139

Query: 1080 KKSFKIRELRGEGASTMLSFAWIPVEYLVRI 1172
             +S +++      ++ MLSFAWI  +YL RI
Sbjct: 1140 ARSLELQLPDAISSTVMLSFAWIAADYLARI 1170


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  547 bits (1409), Expect = e-153
 Identities = 262/391 (67%), Positives = 312/391 (79%), Gaps = 1/391 (0%)
 Frame = +3

Query: 3    QCFIQVSTPSLENCFSKHGPEFSESVKNFHVIEGTVVIAKNPCLHPGDIRILEAVDVPGL 182
            QCFIQVS+PSLENCF KHGP+FS+  +N  V++G VVIAKNPCLHPGD+RILEAVDVP L
Sbjct: 780  QCFIQVSSPSLENCFVKHGPKFSDIKQNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSL 839

Query: 183  RHLVDCLVFPQKGPRPHTDEASGSDLDGDLYFVTWDEELIPPSKEGWLPMQYAPAEAKKL 362
             HL DCLVFPQKG RPH++EASGSDLDGDLYFVTWDE LIPPSK+ W+PM Y PAE K+L
Sbjct: 840  SHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWIPMNYEPAEVKQL 899

Query: 363  QRKVNNLDIIKFFTESMLSEHLGTICNAHVVHADLSENGALDEKCIKLAKLAAVAVDFPK 542
             R+VN++DII FF+++M+ E LG ICNAHVVHADLSE GALDEKC+KLA+LAA+AVDFPK
Sbjct: 900  GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959

Query: 543  TGKLVTMPSYLKPKVYPDFMGKPEFQSYESNKILGKLYRKVKDASDGEIPISPELS-APQ 719
            TGKLVTMP  LKPK+YPDFMGK EFQSY+S KILGKLYR+VKD  D E  +S  L   P+
Sbjct: 960  TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPK 1019

Query: 720  DIPYDIDLEVPGSEDFIVDSWNRKCAYDRQLQALLGQFKVSTEAEVVTGHIWSLYAYNNW 899
            DIPYD  LE+ GS  FI D+WN KC+YD QL  LLGQ+KV+ E EVVTGHIWS+  Y+  
Sbjct: 1020 DIPYDSTLEILGSTAFIDDAWNSKCSYDGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079

Query: 900  KQGQVKEKLIHAYRALNKDFKCAFENLGQDFEQFSKEDKNLVYERKASAWYQVTYHPQWV 1079
            KQG++KE+L HAY  L K+F+  FE +  DF+    ++KN +YERKASAWYQVTYHP WV
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMDPDFDLLPDDEKNDMYERKASAWYQVTYHPHWV 1139

Query: 1080 KKSFKIRELRGEGASTMLSFAWIPVEYLVRI 1172
             +S +++       + MLSFAWI  +YL RI
Sbjct: 1140 ARSLELQLPDAVSNTVMLSFAWIAADYLARI 1170


>ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
            max] gi|571459266|ref|XP_006581359.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
            max]
          Length = 1204

 Score =  546 bits (1408), Expect = e-153
 Identities = 262/396 (66%), Positives = 309/396 (78%), Gaps = 7/396 (1%)
 Frame = +3

Query: 3    QCFIQVSTPSLENCFSKHGPEFSESVKNFHVIEGTVVIAKNPCLHPGDIRILEAVDVPGL 182
            QCF+QVSTPSLENCFSKHG  FSE+ KN HV++G V+IAKNPCLHPGD+R+LEAVD P L
Sbjct: 780  QCFVQVSTPSLENCFSKHGSRFSET-KNLHVVKGFVIIAKNPCLHPGDVRVLEAVDAPDL 838

Query: 183  RHLVDCLVFPQKGPRPHTDEASGSDLDGDLYFVTWDEELIPPSKEGWLPMQYAPAEAKKL 362
             HL DCLVFPQKG RPHT+EASGSDLDGDLYFVTWDE LIPPSK  W+PM+YAP E+K  
Sbjct: 839  HHLNDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENLIPPSKRSWIPMEYAPQESKLK 898

Query: 363  QRKVNNLDIIKFFTESMLSEHLGTICNAHVVHADLSENGALDEKCIKLAKLAAVAVDFPK 542
             R+V   DII+FF  +M++EHLG ICNAHVVHAD S+ GALDEKCI LA+LAA AVDFPK
Sbjct: 899  TRQVMTRDIIEFFVRNMVNEHLGAICNAHVVHADSSDYGALDEKCIHLAELAATAVDFPK 958

Query: 543  TGKLVTMPSYLKPKVYPDFMGKPEFQSYESNKILGKLYRKVKDASDGEIPISPELSAPQD 722
            TGKLVTMP +LKPK+YPDFMGK   QSY S KILG+LYR++KDA D +I          D
Sbjct: 959  TGKLVTMPPHLKPKLYPDFMGKERHQSYRSKKILGRLYRRIKDAYDEDIDAPYLNFVTGD 1018

Query: 723  IPYDIDLEVPGSEDFIVDSWNRKCAYDRQLQALLGQFKVSTEAEVVTGHIWSLYAYNNWK 902
            IPYD DLEVPGS DFI D+W +KC+YD QL  LLGQ+KV  E EVVTG IWS+  YN+ K
Sbjct: 1019 IPYDKDLEVPGSADFIADAWEQKCSYDGQLSGLLGQYKVKREEEVVTGQIWSMPKYNSRK 1078

Query: 903  QGQVKEKLIHAYRALNKDFKCAFENLGQDFEQFSKEDKNLVYERKASAWYQVTYHPQWVK 1082
            QG++KE+L H+Y AL K+F+  FE L  D  + S+E+KNL YE+KASAWYQVTYHP+WVK
Sbjct: 1079 QGELKERLKHSYSALKKEFRHTFEKLNSDVGELSEEEKNLFYEQKASAWYQVTYHPEWVK 1138

Query: 1083 KSFKIRELRGE-------GASTMLSFAWIPVEYLVR 1169
            KS  +++   E       G++ MLSF WI V+YL R
Sbjct: 1139 KSLDLQDKSSENQEADSLGSTVMLSFPWIAVDYLAR 1174


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  546 bits (1407), Expect = e-153
 Identities = 261/391 (66%), Positives = 312/391 (79%), Gaps = 1/391 (0%)
 Frame = +3

Query: 3    QCFIQVSTPSLENCFSKHGPEFSESVKNFHVIEGTVVIAKNPCLHPGDIRILEAVDVPGL 182
            QCFIQVS+PSLENCF KHG +FS+  KN  V++G VVIAKNPCLHPGD+RILEAVDVP L
Sbjct: 780  QCFIQVSSPSLENCFVKHGSKFSDIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPSL 839

Query: 183  RHLVDCLVFPQKGPRPHTDEASGSDLDGDLYFVTWDEELIPPSKEGWLPMQYAPAEAKKL 362
             HL DCLVFPQKG RPH++EASGSDLDGDLYFVTWDE +IPPSK+ W+PM Y PAE K+L
Sbjct: 840  SHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENIIPPSKKSWIPMNYEPAEVKQL 899

Query: 363  QRKVNNLDIIKFFTESMLSEHLGTICNAHVVHADLSENGALDEKCIKLAKLAAVAVDFPK 542
             R+VN++DII FF+++M+ E LG ICNAHVVHADLSE GALDEKC+KLA+LAA+AVDFPK
Sbjct: 900  GRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 959

Query: 543  TGKLVTMPSYLKPKVYPDFMGKPEFQSYESNKILGKLYRKVKDASDGEIPISPELS-APQ 719
            TGKLVTMP  LKPK+YPDFMGK EFQSY+S KILGKLYR+VKD  D E  +S  L   P+
Sbjct: 960  TGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKKILGKLYRQVKDVCDAEGEVSAGLEVVPK 1019

Query: 720  DIPYDIDLEVPGSEDFIVDSWNRKCAYDRQLQALLGQFKVSTEAEVVTGHIWSLYAYNNW 899
            DIPYD  LE+ GS  FI D+WN KC+YD QL  LLGQ+KV+ E EVVTGHIWS+  Y+  
Sbjct: 1020 DIPYDTTLEILGSTTFIDDAWNSKCSYDGQLNGLLGQYKVNREEEVVTGHIWSMPKYSAK 1079

Query: 900  KQGQVKEKLIHAYRALNKDFKCAFENLGQDFEQFSKEDKNLVYERKASAWYQVTYHPQWV 1079
            KQG++KE+L HAY  L K+F+  FE +  DF+    ++KN +YERKASAWYQVTYHP WV
Sbjct: 1080 KQGELKERLKHAYNTLRKEFRNVFERMEPDFDLLPDDEKNDMYERKASAWYQVTYHPHWV 1139

Query: 1080 KKSFKIRELRGEGASTMLSFAWIPVEYLVRI 1172
             +S +++      ++ MLSFAWI  +YL RI
Sbjct: 1140 ARSLELQIPDAVSSTVMLSFAWIAADYLARI 1170


>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
            gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
            6 [Theobroma cacao]
          Length = 1197

 Score =  545 bits (1403), Expect = e-152
 Identities = 258/391 (65%), Positives = 314/391 (80%), Gaps = 1/391 (0%)
 Frame = +3

Query: 3    QCFIQVSTPSLENCFSKHGPEFSESVKNFHVIEGTVVIAKNPCLHPGDIRILEAVDVPGL 182
            QCFIQVS PS+ENCF KHG  F+E+ KNF VI+G VVIAKNPCLHPGDIRILEAVD PGL
Sbjct: 780  QCFIQVSNPSVENCFLKHGSRFAETKKNFEVIQGLVVIAKNPCLHPGDIRILEAVDAPGL 839

Query: 183  RHLVDCLVFPQKGPRPHTDEASGSDLDGDLYFVTWDEELIPPSKEGWLPMQYAPAEAKKL 362
             HL DCLVFPQKG RPHT+EASGSDLDGDLYFVTW++ LIPP K+ W PMQY P E K++
Sbjct: 840  HHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWEDLLIPPGKKSWPPMQYDPGETKEI 899

Query: 363  QRKVNNLDIIKFFTESMLSEHLGTICNAHVVHADLSENGALDEKCIKLAKLAAVAVDFPK 542
            QR+VN+ DII FF ++M++EHLGTICNAHVVHADLSE GALDEKCI LA+LAA AVDFPK
Sbjct: 900  QREVNHKDIIDFFAKNMVNEHLGTICNAHVVHADLSEYGALDEKCIHLAELAATAVDFPK 959

Query: 543  TGKLVTMPSYLKPKVYPDFMGKPEFQSYESNKILGKLYRKVKDASDGEIPISPELSAPQ- 719
            TGK+V+MP+ LKPK+YPDFMGK E+QSY+S KILG+LYR +KD  D ++  S E++    
Sbjct: 960  TGKIVSMPANLKPKLYPDFMGKEEYQSYKSRKILGRLYRHIKDVYDEDLSESSEINLDSP 1019

Query: 720  DIPYDIDLEVPGSEDFIVDSWNRKCAYDRQLQALLGQFKVSTEAEVVTGHIWSLYAYNNW 899
            DI YD DLEV GS D+I D+W +KC+YDRQL  LLGQ+KV  E EVVTGHIWS+  Y + 
Sbjct: 1020 DINYDTDLEVTGSADYIDDAWVKKCSYDRQLIGLLGQYKVKREEEVVTGHIWSMPKYTSR 1079

Query: 900  KQGQVKEKLIHAYRALNKDFKCAFENLGQDFEQFSKEDKNLVYERKASAWYQVTYHPQWV 1079
            K G +KEKL H+Y AL K+F+  FE++  + EQ +++++N +YERKASAWYQVTYHP+WV
Sbjct: 1080 KLGDLKEKLGHSYGALRKEFRQIFESMDSEIEQLNEDERNELYERKASAWYQVTYHPKWV 1139

Query: 1080 KKSFKIRELRGEGASTMLSFAWIPVEYLVRI 1172
            +K  ++++  G     MLSFAWI  +YL RI
Sbjct: 1140 EKKLELQKSDGADPVVMLSFAWIAADYLARI 1170


>ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
            gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase
            6 [Solanum lycopersicum]
          Length = 1197

 Score =  544 bits (1402), Expect = e-152
 Identities = 263/391 (67%), Positives = 309/391 (79%), Gaps = 1/391 (0%)
 Frame = +3

Query: 3    QCFIQVSTPSLENCFSKHGPEFSESVKNFHVIEGTVVIAKNPCLHPGDIRILEAVDVPGL 182
            QCFIQVS+PSLE CF KHGPEFSE  KN  V++G VVIAKNPCLHPGD+RILEAVDVPGL
Sbjct: 780  QCFIQVSSPSLETCFVKHGPEFSEIKKNLQVVKGLVVIAKNPCLHPGDVRILEAVDVPGL 839

Query: 183  RHLVDCLVFPQKGPRPHTDEASGSDLDGDLYFVTWDEELIPPSKEGWLPMQYAPAEAKKL 362
             HL DCLVFPQKG RPH++EASGSDLDGDLYFVTWDE LIPPSK+ W+PM YAPAEAK+L
Sbjct: 840  HHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWMPMAYAPAEAKQL 899

Query: 363  QRKVNNLDIIKFFTESMLSEHLGTICNAHVVHADLSENGALDEKCIKLAKLAAVAVDFPK 542
             R+V + DII FF ++M+ E LG ICNAHVVHADLSE GA+DEKC+KLA+LAA+AVDFPK
Sbjct: 900  GRQVQHTDIIDFFLKNMVQESLGEICNAHVVHADLSEFGAMDEKCLKLAELAALAVDFPK 959

Query: 543  TGKLVTMPSYLKPKVYPDFMGKPEFQSYESNKILGKLYRKVKDASDGEIPISPELS-APQ 719
            TGKLVTMP  LKPK+YPDFMGK  FQSYES KILGKLYR+V D  D E   S  L   P+
Sbjct: 960  TGKLVTMPFDLKPKMYPDFMGKEPFQSYESKKILGKLYRQVIDVYDAEGGESSGLEYVPK 1019

Query: 720  DIPYDIDLEVPGSEDFIVDSWNRKCAYDRQLQALLGQFKVSTEAEVVTGHIWSLYAYNNW 899
            DIPYD +LE+PG EDFI D+WN KC+YD QL  LLGQ+KV+ E EVVTGHIWS+  Y+  
Sbjct: 1020 DIPYDTNLEIPGYEDFIDDAWNHKCSYDGQLNGLLGQYKVNGEEEVVTGHIWSMPKYSAK 1079

Query: 900  KQGQVKEKLIHAYRALNKDFKCAFENLGQDFEQFSKEDKNLVYERKASAWYQVTYHPQWV 1079
            KQG++KE+L HAY  L K+F+  FE +  DF+    ++KN +YERKA AWY+VTYHP WV
Sbjct: 1080 KQGELKERLKHAYNMLRKEFRNVFEQMEPDFDLLPIDEKNDMYERKAFAWYRVTYHPHWV 1139

Query: 1080 KKSFKIRELRGEGASTMLSFAWIPVEYLVRI 1172
             +S +++         MLSFAWI  +Y+ RI
Sbjct: 1140 TRSLELQLPDAVSNGVMLSFAWIAADYIARI 1170


>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
            tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
            tuberosum]
          Length = 1198

 Score =  543 bits (1399), Expect = e-152
 Identities = 262/391 (67%), Positives = 310/391 (79%), Gaps = 1/391 (0%)
 Frame = +3

Query: 3    QCFIQVSTPSLENCFSKHGPEFSESVKNFHVIEGTVVIAKNPCLHPGDIRILEAVDVPGL 182
            QCFIQVS+PSLE CF KHGP+FSE  KN  VI+G VVIAKNPCLHPGD+RILEAVDVPGL
Sbjct: 781  QCFIQVSSPSLETCFVKHGPKFSEIKKNLQVIKGLVVIAKNPCLHPGDVRILEAVDVPGL 840

Query: 183  RHLVDCLVFPQKGPRPHTDEASGSDLDGDLYFVTWDEELIPPSKEGWLPMQYAPAEAKKL 362
             HL DCLVFPQKG RPH++EASGSDLDGDLYFVTWDE LIPPSK+ W+PM YAPAEAK+L
Sbjct: 841  HHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDENLIPPSKKSWMPMDYAPAEAKQL 900

Query: 363  QRKVNNLDIIKFFTESMLSEHLGTICNAHVVHADLSENGALDEKCIKLAKLAAVAVDFPK 542
             R+V + DII FF+++M+ E LG ICNAHVVHADLSE GALDEKC+KLA+LAA+AVDFPK
Sbjct: 901  GRQVQHTDIIDFFSKNMVQESLGEICNAHVVHADLSEFGALDEKCLKLAELAALAVDFPK 960

Query: 543  TGKLVTMPSYLKPKVYPDFMGKPEFQSYESNKILGKLYRKVKDASDGEIPISPELS-APQ 719
            TGKLVTMP  LKPK+YPDFMGK  FQ+YES KILGKLYR+V D  D E   S  L   P+
Sbjct: 961  TGKLVTMPFDLKPKMYPDFMGKEPFQTYESKKILGKLYRQVIDVYDAEGGESSGLEFVPK 1020

Query: 720  DIPYDIDLEVPGSEDFIVDSWNRKCAYDRQLQALLGQFKVSTEAEVVTGHIWSLYAYNNW 899
            DIPYD ++E+ G EDFI D+WN KC+YD QL  LLGQ+KV+ E EVVTGHIWS+  Y+  
Sbjct: 1021 DIPYDTNIEILGYEDFIDDAWNHKCSYDGQLNGLLGQYKVNGEEEVVTGHIWSMPKYSAK 1080

Query: 900  KQGQVKEKLIHAYRALNKDFKCAFENLGQDFEQFSKEDKNLVYERKASAWYQVTYHPQWV 1079
            KQG++KE+L HAY  L K+F+  FE +  DF+    ++KN +YERKASAWY+VTYHP WV
Sbjct: 1081 KQGELKERLKHAYNTLRKEFRNVFEQMEPDFDMLPVDEKNDMYERKASAWYRVTYHPHWV 1140

Query: 1080 KKSFKIRELRGEGASTMLSFAWIPVEYLVRI 1172
             +S +++         MLSFAWI  +Y+ RI
Sbjct: 1141 TRSLELQLPDAVSNGVMLSFAWIAADYIARI 1171


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1198

 Score =  543 bits (1399), Expect = e-152
 Identities = 258/392 (65%), Positives = 313/392 (79%), Gaps = 2/392 (0%)
 Frame = +3

Query: 3    QCFIQVSTPSLENCFSKHGPEFSESVKNFHVIEGTVVIAKNPCLHPGDIRILEAVDVPGL 182
            QCFIQVS   LENCF KHG +FSE+ KN  V++GTVVIAKNPCLHPGDIRILEAVD PGL
Sbjct: 780  QCFIQVSNSYLENCFVKHGSKFSETKKNLQVVKGTVVIAKNPCLHPGDIRILEAVDAPGL 839

Query: 183  RHLVDCLVFPQKGPRPHTDEASGSDLDGDLYFVTWDEELIPPSKEGWLPMQYAPAEAKKL 362
             HL DCLVFPQKG RPH +EASGSDLDGDLYFVTWDE LIPPSK  W+PMQY  AEAK+L
Sbjct: 840  HHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDENLIPPSKRSWIPMQYDAAEAKQL 899

Query: 363  QRKVNNLDIIKFFTESMLSEHLGTICNAHVVHADLSENGALDEKCIKLAKLAAVAVDFPK 542
             R VN+ DI++FF ++M +E+LG ICNAHVV ADLSE GALDEKC+ LA+LAA AVDFPK
Sbjct: 900  TRPVNHQDIVEFFAKNMANENLGAICNAHVVRADLSEYGALDEKCLTLAELAATAVDFPK 959

Query: 543  TGKLVTMPSYLKPKVYPDFMGKPEFQSYESNKILGKLYRKVKDA-SDGEIPISPELSAPQ 719
            TGK+V+MPS LKPK+YPDFMGK E QSY+S KILG+LYR++KDA  D ++  S EL+  +
Sbjct: 960  TGKIVSMPSDLKPKIYPDFMGKEEHQSYKSKKILGRLYRQIKDAYDDDDVAASSELNFVR 1019

Query: 720  -DIPYDIDLEVPGSEDFIVDSWNRKCAYDRQLQALLGQFKVSTEAEVVTGHIWSLYAYNN 896
             DIPYD+DLEV G+ DFI D+W+RKC+YD QL  LL Q+KV  E EVVTGH+WS+   ++
Sbjct: 1020 GDIPYDLDLEVLGATDFISDAWDRKCSYDGQLNGLLAQYKVKREEEVVTGHVWSMPKGSS 1079

Query: 897  WKQGQVKEKLIHAYRALNKDFKCAFENLGQDFEQFSKEDKNLVYERKASAWYQVTYHPQW 1076
             KQG +KE+L H+Y  L ++F+  FE +  DF Q   ++KN++YERKASAWYQVTYHP W
Sbjct: 1080 RKQGDLKERLKHSYNCLKREFRQVFEKMDLDFGQLDDDEKNMLYERKASAWYQVTYHPHW 1139

Query: 1077 VKKSFKIRELRGEGASTMLSFAWIPVEYLVRI 1172
            ++KS ++++  G G S MLSFAWI  +YL RI
Sbjct: 1140 IQKSLELQDSDGAGISVMLSFAWIAADYLARI 1171


>gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]
          Length = 1195

 Score =  542 bits (1396), Expect = e-151
 Identities = 258/390 (66%), Positives = 314/390 (80%)
 Frame = +3

Query: 3    QCFIQVSTPSLENCFSKHGPEFSESVKNFHVIEGTVVIAKNPCLHPGDIRILEAVDVPGL 182
            QCFIQVS PSLE+CF+ HG EFSE+ K+  VI+G VVIAKNPCLHPGD+RILEAVDV GL
Sbjct: 779  QCFIQVSKPSLEDCFANHGSEFSETKKDLEVIKGLVVIAKNPCLHPGDVRILEAVDVRGL 838

Query: 183  RHLVDCLVFPQKGPRPHTDEASGSDLDGDLYFVTWDEELIPPSKEGWLPMQYAPAEAKKL 362
             HL DCLVFPQKG RPH +EASGSDLDGDLYFVTWD+ LIPPSK  WLPM Y P E K  
Sbjct: 839  HHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDDTLIPPSKRSWLPMDYEPGEVKLK 898

Query: 363  QRKVNNLDIIKFFTESMLSEHLGTICNAHVVHADLSENGALDEKCIKLAKLAAVAVDFPK 542
             R+V + DII+FFT++M++E LGTICNAHVVHADLSE GALDEKCIKLA+LAA+AVDFPK
Sbjct: 899  PREVTHSDIIEFFTKNMVNESLGTICNAHVVHADLSEYGALDEKCIKLAELAAIAVDFPK 958

Query: 543  TGKLVTMPSYLKPKVYPDFMGKPEFQSYESNKILGKLYRKVKDASDGEIPISPELSAPQD 722
            TGK+VTMP  LKP++YPDFMGK E QSY+S KILGKLYR+V+DA + +   S +L+ P D
Sbjct: 959  TGKIVTMPPDLKPQMYPDFMGKEELQSYKSTKILGKLYRRVRDAYNLDYEASSQLTYPAD 1018

Query: 723  IPYDIDLEVPGSEDFIVDSWNRKCAYDRQLQALLGQFKVSTEAEVVTGHIWSLYAYNNWK 902
            I YD +LEV GS+DFI D+W+ KC+YD QL  LLGQ+KV++E EVVTGHIWS+  +++ K
Sbjct: 1019 ISYDQELEVTGSKDFIADAWSCKCSYDGQLAGLLGQYKVNSEDEVVTGHIWSMPKFSSKK 1078

Query: 903  QGQVKEKLIHAYRALNKDFKCAFENLGQDFEQFSKEDKNLVYERKASAWYQVTYHPQWVK 1082
            QG++KE+L HAY AL KD++  FE +   F+Q    +KN++YE+KASAWYQVTY   WVK
Sbjct: 1079 QGELKERLKHAYNALRKDYRKVFECMAPGFDQLPDHEKNVLYEQKASAWYQVTYQDNWVK 1138

Query: 1083 KSFKIRELRGEGASTMLSFAWIPVEYLVRI 1172
            KS +++EL   G + +LSFAWI  +YL RI
Sbjct: 1139 KSKELQELDDSGKTVLLSFAWIAADYLARI 1168


>ref|XP_007137030.1| hypothetical protein PHAVU_009G093700g [Phaseolus vulgaris]
            gi|561010117|gb|ESW09024.1| hypothetical protein
            PHAVU_009G093700g [Phaseolus vulgaris]
          Length = 1204

 Score =  538 bits (1385), Expect = e-150
 Identities = 260/396 (65%), Positives = 306/396 (77%), Gaps = 7/396 (1%)
 Frame = +3

Query: 3    QCFIQVSTPSLENCFSKHGPEFSESVKNFHVIEGTVVIAKNPCLHPGDIRILEAVDVPGL 182
            QCF+QVSTPSLENCFSKHG  FSE+ KN  V++G VVIAKNPCLHPGD+R+LEAVD P L
Sbjct: 780  QCFVQVSTPSLENCFSKHGSRFSET-KNLQVVKGFVVIAKNPCLHPGDVRVLEAVDAPDL 838

Query: 183  RHLVDCLVFPQKGPRPHTDEASGSDLDGDLYFVTWDEELIPPSKEGWLPMQYAPAEAKKL 362
             HL DCLVFPQKG RPHT+EASGSDLDGDLYFVTWDE+LIPPSK  W+PM+YA  E+K  
Sbjct: 839  HHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDEDLIPPSKRSWIPMEYAAQESKLQ 898

Query: 363  QRKVNNLDIIKFFTESMLSEHLGTICNAHVVHADLSENGALDEKCIKLAKLAAVAVDFPK 542
             R+V   DII FF  +M++EHLG ICNAHVVHAD S+  ALDEKCI LA+LAA AVDFPK
Sbjct: 899  TRQVTTRDIIDFFVRNMVNEHLGAICNAHVVHADSSDYDALDEKCIHLAELAATAVDFPK 958

Query: 543  TGKLVTMPSYLKPKVYPDFMGKPEFQSYESNKILGKLYRKVKDASDGEIPISPELSAPQD 722
            TGKLVTMP +LKPK+YPDFMGK + QSY S K+LG+LYR++KDA D +I          D
Sbjct: 959  TGKLVTMPYHLKPKLYPDFMGKEKHQSYRSKKVLGRLYRRIKDAYDEDIDAPYLNFVSGD 1018

Query: 723  IPYDIDLEVPGSEDFIVDSWNRKCAYDRQLQALLGQFKVSTEAEVVTGHIWSLYAYNNWK 902
            IPYD DLEVPGS  FI DSW +KCAYD QL  LLGQ+KV  E EVVTG IWS+  YN+ K
Sbjct: 1019 IPYDKDLEVPGSSAFIADSWEQKCAYDGQLSGLLGQYKVKREEEVVTGQIWSMPKYNSRK 1078

Query: 903  QGQVKEKLIHAYRALNKDFKCAFENLGQDFEQFSKEDKNLVYERKASAWYQVTYHPQWVK 1082
            QG++KE+L H+Y AL K+F+  FE L  D  + S+E+KNL+YE+KASAWYQVTYHP WVK
Sbjct: 1079 QGELKERLKHSYSALKKEFRHTFEKLSSDVGELSEEEKNLLYEQKASAWYQVTYHPYWVK 1138

Query: 1083 KSFKIRELRGE-------GASTMLSFAWIPVEYLVR 1169
            KS  +++   E       G++ MLSF WI V+YL R
Sbjct: 1139 KSLDLQDKSPESQEADCLGSTVMLSFPWIAVDYLAR 1174


>ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
          Length = 1197

 Score =  538 bits (1385), Expect = e-150
 Identities = 254/392 (64%), Positives = 312/392 (79%), Gaps = 2/392 (0%)
 Frame = +3

Query: 3    QCFIQVSTPSLENCFSKHGPEFSESVKNFHVIEGTVVIAKNPCLHPGDIRILEAVDVPGL 182
            QCFIQVSTP LE CFSKHG  F+E+  N  V+ GTVVIAKNPCLHPGD+RILEAVD P L
Sbjct: 779  QCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPEL 838

Query: 183  RHLVDCLVFPQKGPRPHTDEASGSDLDGDLYFVTWDEELIPPSKEGWLPMQYAPAEAKKL 362
             HL DCLVFP+ G RPHT+EASGSDLDGDLYF TWD  LIPPSK+ W PM+YAPAE K L
Sbjct: 839  HHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTL 898

Query: 363  QRKVNNLDIIKFFTESMLSEHLGTICNAHVVHADLSENGALDEKCIKLAKLAAVAVDFPK 542
            QRK+   DI++FF ++M++E LGTICNAHVVHAD S++GALDE CI+L++LAA AVDFPK
Sbjct: 899  QRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPK 958

Query: 543  TGKLVTMPSYLKPKVYPDFMGKPEFQSYESNKILGKLYRKVKDA-SDGEIPISPELS-AP 716
            TGKLVTMP +LKPK+YPDFMGK   QSY+S KILGK+YR+++DA  D ++  S EL+  P
Sbjct: 959  TGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTP 1018

Query: 717  QDIPYDIDLEVPGSEDFIVDSWNRKCAYDRQLQALLGQFKVSTEAEVVTGHIWSLYAYNN 896
             D+ YD+DLEV G+EDFI ++W++KC+YD QL  LLGQ+KV+ E E+VTGHIWS+  Y +
Sbjct: 1019 GDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVS 1078

Query: 897  WKQGQVKEKLIHAYRALNKDFKCAFENLGQDFEQFSKEDKNLVYERKASAWYQVTYHPQW 1076
             KQG++KEKL H+Y  L KDF+  FENLG +FEQ + +++N +YE+KASAWYQV YHP W
Sbjct: 1079 RKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTW 1138

Query: 1077 VKKSFKIRELRGEGASTMLSFAWIPVEYLVRI 1172
            +KKS ++RE     A  MLSF WI  +YL RI
Sbjct: 1139 LKKSLELREPDAPEAVPMLSFPWIAADYLARI 1170


>ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis sativus]
            gi|316989907|gb|ADU77019.1| RNA-dependent RNA polymerase
            6 [Cucumis sativus]
          Length = 1197

 Score =  538 bits (1385), Expect = e-150
 Identities = 254/392 (64%), Positives = 312/392 (79%), Gaps = 2/392 (0%)
 Frame = +3

Query: 3    QCFIQVSTPSLENCFSKHGPEFSESVKNFHVIEGTVVIAKNPCLHPGDIRILEAVDVPGL 182
            QCFIQVSTP LE CFSKHG  F+E+  N  V+ GTVVIAKNPCLHPGD+RILEAVD P L
Sbjct: 779  QCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIAKNPCLHPGDVRILEAVDAPEL 838

Query: 183  RHLVDCLVFPQKGPRPHTDEASGSDLDGDLYFVTWDEELIPPSKEGWLPMQYAPAEAKKL 362
             HL DCLVFP+ G RPHT+EASGSDLDGDLYF TWD  LIPPSK+ W PM+YAPAE K L
Sbjct: 839  HHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNLIPPSKKSWPPMEYAPAEVKTL 898

Query: 363  QRKVNNLDIIKFFTESMLSEHLGTICNAHVVHADLSENGALDEKCIKLAKLAAVAVDFPK 542
            QRK+   DI++FF ++M++E LGTICNAHVVHAD S++GALDE CI+L++LAA AVDFPK
Sbjct: 899  QRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHGALDENCIQLSELAATAVDFPK 958

Query: 543  TGKLVTMPSYLKPKVYPDFMGKPEFQSYESNKILGKLYRKVKDA-SDGEIPISPELS-AP 716
            TGKLVTMP +LKPK+YPDFMGK   QSY+S KILGK+YR+++DA  D ++  S EL+  P
Sbjct: 959  TGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKILGKMYRRIRDAYDDDDMITSRELNFTP 1018

Query: 717  QDIPYDIDLEVPGSEDFIVDSWNRKCAYDRQLQALLGQFKVSTEAEVVTGHIWSLYAYNN 896
             D+ YD+DLEV G+EDFI ++W++KC+YD QL  LLGQ+KV+ E E+VTGHIWS+  Y +
Sbjct: 1019 GDVHYDVDLEVAGAEDFIAEAWDQKCSYDGQLSGLLGQYKVNREEEIVTGHIWSMPKYVS 1078

Query: 897  WKQGQVKEKLIHAYRALNKDFKCAFENLGQDFEQFSKEDKNLVYERKASAWYQVTYHPQW 1076
             KQG++KEKL H+Y  L KDF+  FENLG +FEQ + +++N +YE+KASAWYQV YHP W
Sbjct: 1079 RKQGELKEKLKHSYSTLKKDFRQVFENLGPEFEQLTCDERNALYEKKASAWYQVAYHPTW 1138

Query: 1077 VKKSFKIRELRGEGASTMLSFAWIPVEYLVRI 1172
            +KKS ++RE     A  MLSF WI  +YL RI
Sbjct: 1139 LKKSLELREPDAPEAVPMLSFPWIAADYLARI 1170


>gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus guttatus]
          Length = 1196

 Score =  536 bits (1381), Expect = e-150
 Identities = 258/391 (65%), Positives = 313/391 (80%), Gaps = 1/391 (0%)
 Frame = +3

Query: 3    QCFIQVSTPSLENCFSKHGPEFSESVKNFHVIEGTVVIAKNPCLHPGDIRILEAVDVPGL 182
            QCFIQVS PSLE+CF KHG EFS + K   VI+G V IAKNPCLHPGD+RILEAVD PGL
Sbjct: 781  QCFIQVSNPSLEDCFVKHGSEFSGAKKKLEVIKGLVAIAKNPCLHPGDVRILEAVDCPGL 840

Query: 183  RHLVDCLVFPQKGPRPHTDEASGSDLDGDLYFVTWDEELIPPSKEGWLPMQYAPAEAKKL 362
             HL DCLVFPQKG RPHT+EASGSDLDGDLYFVTWDE L+PPSK  W PM+YAP E K+L
Sbjct: 841  HHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDENLMPPSKRSWTPMEYAPGEVKQL 900

Query: 363  QRKVNNLDIIKFFTESMLSEHLGTICNAHVVHADLSENGALDEKCIKLAKLAAVAVDFPK 542
             R+V + DII+FFT++M++E LG ICNAHVVHAD SE GALDEKCIKLA+LAA+AVDFPK
Sbjct: 901  PREVKHTDIIEFFTKNMVNESLGAICNAHVVHADSSEYGALDEKCIKLAELAAIAVDFPK 960

Query: 543  TGKLVTMPSYLKPKVYPDFMGKPEFQSYESNKILGKLYRKVKDASDGEIPISPELSAPQD 722
            TGK+VTMP+ LKPK+YPDFMGK EFQ+Y+S+KILGKLYRK+KD++      S   S   +
Sbjct: 961  TGKIVTMPAELKPKLYPDFMGKDEFQTYKSSKILGKLYRKIKDSNYDYEESSENTSV--N 1018

Query: 723  IPYDIDLEVPGSEDFIVDSWNRKCAYDRQLQALLGQFKVSTEAEVVTGHIWSLYAYNNWK 902
            I YD +LE+ GSE FI D+WN KC+YD QL  LLGQ+KV++E EVVTGHIWS+  Y++ K
Sbjct: 1019 IAYDQELEIAGSESFITDAWNCKCSYDGQLTGLLGQYKVNSEEEVVTGHIWSMPKYSSKK 1078

Query: 903  QGQVKEKLIHAYRALNKDFKCAFENLGQDFEQFSKEDKNLVYERKASAWYQVTYHPQWVK 1082
            QG++KE+L HAY  L KDF+  FE++  +F+Q S ++KN ++ERKASAWYQVTY+  WVK
Sbjct: 1079 QGELKERLKHAYSTLRKDFRKVFESMDAEFDQLSDDEKNTMFERKASAWYQVTYNESWVK 1138

Query: 1083 KSFKIRELRGE-GASTMLSFAWIPVEYLVRI 1172
            KS  ++ +  E G + MLSFAWI  +YL RI
Sbjct: 1139 KSKDLQVVDDEVGKTVMLSFAWIAADYLARI 1169


>ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca subsp.
            vesca]
          Length = 1197

 Score =  536 bits (1381), Expect = e-150
 Identities = 251/391 (64%), Positives = 305/391 (78%), Gaps = 1/391 (0%)
 Frame = +3

Query: 3    QCFIQVSTPSLENCFSKHGPEFSESVKNFHVIEGTVVIAKNPCLHPGDIRILEAVDVPGL 182
            QCF+QVSTPSLENCF+KHG  F ++ KN  VI+G VV+AKNPCLHPGDIRILEAVD PGL
Sbjct: 780  QCFVQVSTPSLENCFAKHGSRFDQTDKNLQVIKGFVVVAKNPCLHPGDIRILEAVDAPGL 839

Query: 183  RHLVDCLVFPQKGPRPHTDEASGSDLDGDLYFVTWDEELIPPSKEGWLPMQYAPAEAKKL 362
             HL DCLVFPQKG RPHTDEASGSDLDGDLYFVTWDE LIPP K+ W PM+Y PAEAK  
Sbjct: 840  HHLHDCLVFPQKGHRPHTDEASGSDLDGDLYFVTWDENLIPPRKKSWQPMEYEPAEAKLS 899

Query: 363  QRKVNNLDIIKFFTESMLSEHLGTICNAHVVHADLSENGALDEKCIKLAKLAAVAVDFPK 542
             R V + D+I+FF  +M++E+LG ICNAHVVH+D SE GA DE C+KLA+LAAVAVDFPK
Sbjct: 900  GRSVTSQDLIEFFVRNMVNENLGAICNAHVVHSDRSEYGAFDENCLKLAELAAVAVDFPK 959

Query: 543  TGKLVTMPSYLKPKVYPDFMGKPEFQSYESNKILGKLYRKVKDASDGEIPISPELS-APQ 719
            TGK+VTMP +LKPK+YPDFMGK ++QSY+SNKILG+LYRK+ DA D ++  S E +  P 
Sbjct: 960  TGKIVTMPPHLKPKLYPDFMGKQDYQSYKSNKILGRLYRKICDAYDEDVANSSEQNHVPS 1019

Query: 720  DIPYDIDLEVPGSEDFIVDSWNRKCAYDRQLQALLGQFKVSTEAEVVTGHIWSLYAYNNW 899
            D+ YD+DLEVP + DFI D+W RKC+YD QL+ L+ Q+K+  E E+VTGH+WS+  Y + 
Sbjct: 1020 DVKYDMDLEVPKAADFIADAWERKCSYDSQLRGLMTQYKIMREEEIVTGHVWSMPKYTSR 1079

Query: 900  KQGQVKEKLIHAYRALNKDFKCAFENLGQDFEQFSKEDKNLVYERKASAWYQVTYHPQWV 1079
            KQG+++E+L H+Y AL K+F+  FE +   FE    + KN  YE+KASAWYQVTYHP WV
Sbjct: 1080 KQGELQERLKHSYSALKKEFRQFFEKMDTGFESLIDDQKNSFYEQKASAWYQVTYHPDWV 1139

Query: 1080 KKSFKIRELRGEGASTMLSFAWIPVEYLVRI 1172
            KKS  +    G G   MLSFAWI  +YL RI
Sbjct: 1140 KKSLDLHGPDGPGDVVMLSFAWIAADYLARI 1170