BLASTX nr result
ID: Sinomenium22_contig00002958
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00002958
(1418 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula] ... 105 5e-36
ref|XP_006850268.1| hypothetical protein AMTR_s00020p00100020 [A... 155 4e-35
ref|XP_003588412.1| Ribosomal protein S10 [Medicago truncatula] ... 103 4e-32
emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera] 125 4e-26
emb|CBI40707.3| unnamed protein product [Vitis vinifera] 115 6e-23
emb|CBI31112.3| unnamed protein product [Vitis vinifera] 113 2e-22
ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago ... 103 2e-19
ref|XP_002535059.1| conserved hypothetical protein [Ricinus comm... 96 3e-17
ref|XP_002535058.1| conserved hypothetical protein [Ricinus comm... 73 4e-10
ref|YP_008992302.1| ribosomal protein S10 (mitochondrion) [Salvi... 66 3e-08
ref|YP_004222833.1| ribosomal protein S10 [Vigna radiata] gi|476... 66 3e-08
ref|YP_173396.1| ribosomal protein S10 [Nicotiana tabacum] 65 7e-08
emb|CAA52823.1| ribosomal protein S10 [Solanum tuberosum] gi|345... 65 7e-08
ref|YP_007905692.1| ribosomal protein S10 (mitochondrion) [Lirio... 64 2e-07
ref|YP_002608378.1| ribosomal protein S10 [Vitis vinifera] gi|20... 64 2e-07
gb|AGC78974.1| ribosomal protein S10 (mitochondrion) [Vicia faba] 63 3e-07
gb|AEN56107.1| ribosomal protein S10 [Cucumis melo subsp. melo] 61 1e-06
>ref|XP_003588337.1| Ribosomal protein S10 [Medicago truncatula]
gi|355477385|gb|AES58588.1| Ribosomal protein S10
[Medicago truncatula]
Length = 1152
Score = 105 bits (261), Expect(2) = 5e-36
Identities = 56/79 (70%), Positives = 62/79 (78%), Gaps = 6/79 (7%)
Frame = +2
Query: 290 FPFRFTECDLGHDGSLRASVGKRSPEYSTRSP-FLAAMGSTCEQGKPNGNQKTGG--YRI 460
FPFRFTECDLGHDG LRASVGKRSPEYSTRSP FLAAMGSTC+QGKPNGNQK G +
Sbjct: 957 FPFRFTECDLGHDGGLRASVGKRSPEYSTRSPFFLAAMGSTCKQGKPNGNQKREGTTLTL 1016
Query: 461 GQKTIQKAK---AHPASKP 508
G++ +K + ASKP
Sbjct: 1017 GRRRSKKRRLTLLKLASKP 1035
Score = 74.7 bits (182), Expect(2) = 5e-36
Identities = 35/48 (72%), Positives = 39/48 (81%)
Frame = +1
Query: 58 QKDCRLNAPTPPCLALYLKKKERDRYEAWETMQEVYDTTGNLKEWRQN 201
QKDCR NAPTPPCLALYL + R Y AWE ++EV DTTGNLKEWRQ+
Sbjct: 910 QKDCRQNAPTPPCLALYLTLRIRG-YAAWERIKEVSDTTGNLKEWRQS 956
Score = 103 bits (257), Expect(2) = 4e-32
Identities = 52/56 (92%), Positives = 53/56 (94%)
Frame = +3
Query: 1050 PARPRGIKRSLPVLTWISGDGIRRPEATSSRGRSLALADRLAVSLATAKRLPSAKE 1217
PARPRGIKRSLPVLTWISGDG RRPE TSSRGRSLAL DRLAVSLATAKRLPSAK+
Sbjct: 1035 PARPRGIKRSLPVLTWISGDGKRRPEVTSSRGRSLALGDRLAVSLATAKRLPSAKD 1090
Score = 63.2 bits (152), Expect(2) = 4e-32
Identities = 32/36 (88%), Positives = 33/36 (91%)
Frame = +2
Query: 1307 RIFGAQYEILFSCKTRLDKGKLQRLL*SKILALTLS 1414
R+FGAQYEILF CKTR DKGKLQRLL SKILALTLS
Sbjct: 1117 RLFGAQYEILFYCKTRSDKGKLQRLLRSKILALTLS 1152
>ref|XP_006850268.1| hypothetical protein AMTR_s00020p00100020 [Amborella trichopoda]
gi|548853889|gb|ERN11849.1| hypothetical protein
AMTR_s00020p00100020 [Amborella trichopoda]
Length = 85
Score = 155 bits (392), Expect = 4e-35
Identities = 74/84 (88%), Positives = 76/84 (90%)
Frame = -3
Query: 459 MRYPPVFWFPLGLPCSQVDPMAARKGDLVLYSGDLFPTEARKLPSCPRSHSVNRKGKPTH 280
MR PPVFWFPLGLPCSQVDP A RKGDLVLYS DL PTEA KLPSCP+SHSVNRKGKPTH
Sbjct: 1 MRCPPVFWFPLGLPCSQVDPNAVRKGDLVLYSDDLLPTEACKLPSCPKSHSVNRKGKPTH 60
Query: 279 PSAPLVDAVRFYEASKHSSLVLIH 208
PSAPLVDAV FYEASKHSSL LI+
Sbjct: 61 PSAPLVDAVWFYEASKHSSLALIN 84
>ref|XP_003588412.1| Ribosomal protein S10 [Medicago truncatula]
gi|355477460|gb|AES58663.1| Ribosomal protein S10
[Medicago truncatula]
Length = 159
Score = 103 bits (257), Expect(2) = 4e-32
Identities = 52/56 (92%), Positives = 53/56 (94%)
Frame = +3
Query: 1050 PARPRGIKRSLPVLTWISGDGIRRPEATSSRGRSLALADRLAVSLATAKRLPSAKE 1217
PARPRGIKRSLPVLTWISGDG RRPE TSSRGRSLAL DRLAVSLATAKRLPSAK+
Sbjct: 42 PARPRGIKRSLPVLTWISGDGKRRPEVTSSRGRSLALGDRLAVSLATAKRLPSAKD 97
Score = 63.2 bits (152), Expect(2) = 4e-32
Identities = 32/36 (88%), Positives = 33/36 (91%)
Frame = +2
Query: 1307 RIFGAQYEILFSCKTRLDKGKLQRLL*SKILALTLS 1414
R+FGAQYEILF CKTR DKGKLQRLL SKILALTLS
Sbjct: 124 RLFGAQYEILFYCKTRSDKGKLQRLLRSKILALTLS 159
>emb|CAN65166.1| hypothetical protein VITISV_029400 [Vitis vinifera]
Length = 267
Score = 125 bits (315), Expect = 4e-26
Identities = 67/70 (95%), Positives = 67/70 (95%), Gaps = 2/70 (2%)
Frame = -2
Query: 1159 RAKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAG--ASYRKLLATRFYARPAAYPIG 986
RAKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAG ASYRKLLATRFYAR AAYPIG
Sbjct: 38 RAKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAGLEASYRKLLATRFYARAAAYPIG 97
Query: 985 LEASYLSPIS 956
LEASYLSPIS
Sbjct: 98 LEASYLSPIS 107
Score = 86.3 bits (212), Expect(2) = 8e-15
Identities = 49/87 (56%), Positives = 56/87 (64%), Gaps = 11/87 (12%)
Frame = -3
Query: 435 FPLGLPCSQ-----------VDPMAARKGDLVLYSGDLFPTEARKLPSCPRSHSVNRKGK 289
+P+GL S VDPMAARKGDLVLYSGDLFPTEARKLPSC + KG+
Sbjct: 94 YPIGLEASYLSPISRPFNFLVDPMAARKGDLVLYSGDLFPTEARKLPSCTQITFRESKGE 153
Query: 288 PTHPSAPLVDAVRFYEASKHSSLVLIH 208
+ +VRFYEASKHSSL LI+
Sbjct: 154 AYSSISSSRRSVRFYEASKHSSLALIN 180
Score = 22.3 bits (46), Expect(2) = 8e-15
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = -1
Query: 203 EFCRHSLR 180
EFCRHSLR
Sbjct: 182 EFCRHSLR 189
>emb|CBI40707.3| unnamed protein product [Vitis vinifera]
Length = 574
Score = 115 bits (287), Expect = 6e-23
Identities = 54/59 (91%), Positives = 54/59 (91%)
Frame = +2
Query: 284 VGFPFRFTECDLGHDGSLRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKTGGYRI 460
VGF FRF ECDLGHDGSLRASVGKRS EYSTRSPFLA MGSTCEQGKPNGNQKTGGY I
Sbjct: 515 VGFLFRFIECDLGHDGSLRASVGKRSSEYSTRSPFLATMGSTCEQGKPNGNQKTGGYHI 573
>emb|CBI31112.3| unnamed protein product [Vitis vinifera]
Length = 2099
Score = 113 bits (282), Expect = 2e-22
Identities = 54/55 (98%), Positives = 54/55 (98%)
Frame = +2
Query: 335 LRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKTGGYRIGQKTIQKAKAHPA 499
LRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQK GGYRIGQKTIQKAKAHPA
Sbjct: 1775 LRASVGKRSPEYSTRSPFLAAMGSTCEQGKPNGNQKMGGYRIGQKTIQKAKAHPA 1829
>ref|XP_003588310.1| hypothetical protein MTR_1g005810 [Medicago truncatula]
gi|355477358|gb|AES58561.1| hypothetical protein
MTR_1g005810 [Medicago truncatula]
Length = 146
Score = 103 bits (256), Expect = 2e-19
Identities = 56/61 (91%), Positives = 56/61 (91%), Gaps = 2/61 (3%)
Frame = -2
Query: 1216 SFALGKRFAVAKLTASLSARAKLRPRLLVASGRLIPSPEIQVSTGKDLLIPRGRAG--AS 1043
SFALGKRFAVAKLTASLS RAKLRPRLLV SGRL PSPEIQVSTGKDLLIPRGRAG AS
Sbjct: 19 SFALGKRFAVAKLTASLSPRAKLRPRLLVTSGRLFPSPEIQVSTGKDLLIPRGRAGLEAS 78
Query: 1042 Y 1040
Y
Sbjct: 79 Y 79
Score = 87.8 bits (216), Expect = 1e-14
Identities = 41/48 (85%), Positives = 42/48 (87%)
Frame = -3
Query: 390 RKGDLVLYSGDLFPTEARKLPSCPRSHSVNRKGKPTHPSAPLVDAVRF 247
+KGDLVLYSG FPTEARK PSCPRSHSVNRKGKPTHPSAPLVD F
Sbjct: 89 KKGDLVLYSGIFFPTEARKPPSCPRSHSVNRKGKPTHPSAPLVDRCGF 136
>ref|XP_002535059.1| conserved hypothetical protein [Ricinus communis]
gi|223524111|gb|EEF27320.1| conserved hypothetical
protein [Ricinus communis]
Length = 75
Score = 96.3 bits (238), Expect = 3e-17
Identities = 45/49 (91%), Positives = 46/49 (93%)
Frame = -1
Query: 1418 FRKGSTQGSYFKAISGVCPYPNGSCKKIGFHIELQIYAIGMGWLPLAPP 1272
FRKGSTQGSYFKAISGV PYPNGSCKKIGFHIELQIYAIG+GWL LA P
Sbjct: 26 FRKGSTQGSYFKAISGVFPYPNGSCKKIGFHIELQIYAIGIGWLLLALP 74
>ref|XP_002535058.1| conserved hypothetical protein [Ricinus communis]
gi|223524110|gb|EEF27319.1| conserved hypothetical
protein [Ricinus communis]
Length = 65
Score = 72.8 bits (177), Expect = 4e-10
Identities = 38/38 (100%), Positives = 38/38 (100%)
Frame = +3
Query: 1119 RPEATSSRGRSLALADRLAVSLATAKRLPSAKERAFAT 1232
RPEATSSRGRSLALADRLAVSLATAKRLPSAKERAFAT
Sbjct: 28 RPEATSSRGRSLALADRLAVSLATAKRLPSAKERAFAT 65
>ref|YP_008992302.1| ribosomal protein S10 (mitochondrion) [Salvia miltiorrhiza]
gi|534292376|gb|AGU16668.1| ribosomal protein S10
(mitochondrion) [Salvia miltiorrhiza]
Length = 120
Score = 66.2 bits (160), Expect = 3e-08
Identities = 34/36 (94%), Positives = 34/36 (94%)
Frame = +2
Query: 1307 RIFGAQYEILFSCKTRLDKGKLQRLL*SKILALTLS 1414
RIFGAQYEILFSCKTR DKGKLQRLL SKILALTLS
Sbjct: 85 RIFGAQYEILFSCKTRSDKGKLQRLLRSKILALTLS 120
>ref|YP_004222833.1| ribosomal protein S10 [Vigna radiata]
gi|476507681|ref|YP_007516867.1| ribosomal protein S10
(mitochondrion) [Glycine max] gi|308206766|gb|ADO19903.1|
ribosomal protein S10 [Vigna radiata]
gi|403311559|gb|AFR34307.1| ribosomal protein S10
(mitochondrion) [Glycine max]
Length = 120
Score = 66.2 bits (160), Expect = 3e-08
Identities = 34/36 (94%), Positives = 34/36 (94%)
Frame = +2
Query: 1307 RIFGAQYEILFSCKTRLDKGKLQRLL*SKILALTLS 1414
RIFGAQYEILFSCKTR DKGKLQRLL SKILALTLS
Sbjct: 85 RIFGAQYEILFSCKTRSDKGKLQRLLRSKILALTLS 120
>ref|YP_173396.1| ribosomal protein S10 [Nicotiana tabacum]
Length = 120
Score = 65.1 bits (157), Expect = 7e-08
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +2
Query: 1307 RIFGAQYEILFSCKTRLDKGKLQRLL*SKILALTLS 1414
RIFGAQYEILFSCKTR DKGKLQRLL +KILALTLS
Sbjct: 85 RIFGAQYEILFSCKTRSDKGKLQRLLRNKILALTLS 120
>emb|CAA52823.1| ribosomal protein S10 [Solanum tuberosum] gi|34525897|emb|CAE46637.1|
ribosomal protein S10 [Solanum commersonii]
gi|34525901|emb|CAE46641.1| ribosomal protein S10
[Solanum commersonii x Solanum tuberosum]
gi|34525905|emb|CAE46645.1| ribosomal protein S10
[Solanum commersonii x Solanum tuberosum]
Length = 139
Score = 65.1 bits (157), Expect = 7e-08
Identities = 33/36 (91%), Positives = 34/36 (94%)
Frame = +2
Query: 1307 RIFGAQYEILFSCKTRLDKGKLQRLL*SKILALTLS 1414
RIFGAQYEILFSCKTR DKGKLQRLL +KILALTLS
Sbjct: 104 RIFGAQYEILFSCKTRSDKGKLQRLLRNKILALTLS 139
>ref|YP_007905692.1| ribosomal protein S10 (mitochondrion) [Liriodendron tulipifera]
gi|480541896|gb|AGJ90389.1| ribosomal protein S10
(mitochondrion) [Liriodendron tulipifera]
Length = 119
Score = 63.9 bits (154), Expect = 2e-07
Identities = 33/36 (91%), Positives = 33/36 (91%)
Frame = +2
Query: 1307 RIFGAQYEILFSCKTRLDKGKLQRLL*SKILALTLS 1414
RIFGAQYEILF CKTR DKGKLQRLL SKILALTLS
Sbjct: 84 RIFGAQYEILFYCKTRSDKGKLQRLLRSKILALTLS 119
>ref|YP_002608378.1| ribosomal protein S10 [Vitis vinifera] gi|209954175|emb|CAQ77627.1|
ribosomal protein S10 [Vitis vinifera]
gi|239764725|gb|ACS15196.1| ribosomal protein S10 [Vitis
vinifera]
Length = 120
Score = 63.9 bits (154), Expect = 2e-07
Identities = 33/36 (91%), Positives = 33/36 (91%)
Frame = +2
Query: 1307 RIFGAQYEILFSCKTRLDKGKLQRLL*SKILALTLS 1414
RIFGAQYEILF CKTR DKGKLQRLL SKILALTLS
Sbjct: 85 RIFGAQYEILFYCKTRSDKGKLQRLLRSKILALTLS 120
>gb|AGC78974.1| ribosomal protein S10 (mitochondrion) [Vicia faba]
Length = 120
Score = 63.2 bits (152), Expect = 3e-07
Identities = 32/36 (88%), Positives = 33/36 (91%)
Frame = +2
Query: 1307 RIFGAQYEILFSCKTRLDKGKLQRLL*SKILALTLS 1414
R+FGAQYEILF CKTR DKGKLQRLL SKILALTLS
Sbjct: 85 RLFGAQYEILFFCKTRSDKGKLQRLLRSKILALTLS 120
>gb|AEN56107.1| ribosomal protein S10 [Cucumis melo subsp. melo]
Length = 120
Score = 61.2 bits (147), Expect = 1e-06
Identities = 31/36 (86%), Positives = 32/36 (88%)
Frame = +2
Query: 1307 RIFGAQYEILFSCKTRLDKGKLQRLL*SKILALTLS 1414
RIFGAQY ILFSCKTR DKGKLQRLL S+IL LTLS
Sbjct: 85 RIFGAQYSILFSCKTRSDKGKLQRLLRSQILVLTLS 120