BLASTX nr result
ID: Sinomenium22_contig00002902
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Sinomenium22_contig00002902
(4337 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s... 2054 0.0
ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao... 1894 0.0
ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group] g... 1883 0.0
ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III s... 1878 0.0
ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III s... 1856 0.0
ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III s... 1853 0.0
ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III s... 1850 0.0
ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III s... 1850 0.0
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s... 1849 0.0
ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [S... 1836 0.0
ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [A... 1833 0.0
ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III s... 1823 0.0
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu... 1810 0.0
ref|XP_002300065.1| DNA-directed RNA polymerase family protein [... 1798 0.0
ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citr... 1792 0.0
gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus... 1771 0.0
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s... 1751 0.0
ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phas... 1729 0.0
ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III s... 1720 0.0
ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Sela... 1719 0.0
>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
vinifera]
Length = 1383
Score = 2054 bits (5321), Expect = 0.0
Identities = 1035/1335 (77%), Positives = 1156/1335 (86%), Gaps = 11/1335 (0%)
Frame = +3
Query: 3 RKPIENALLDPHMGPANKSGICATCHGNFTSCPGHFGYLNLVLPVYNVGYFSSVIDILKS 182
RKPIEN LLDP MGPANK+G CATC GNF CPGH GYL L LPVYNVGY S+++DILK
Sbjct: 52 RKPIENGLLDPRMGPANKNGTCATCLGNFRDCPGHCGYLTLALPVYNVGYLSTIVDILKC 111
Query: 183 ICKSCARILLSEKERRDYLKKMRNPRLEALQKSALAKQIVKKCKPT--------CHRCRY 338
ICKSC+R+LL EK +DYLKKMR+ ++EAL+K+ L K+IV+KC C RC Y
Sbjct: 112 ICKSCSRVLLDEKASKDYLKKMRSQKMEALKKAELMKKIVQKCTAMASSKKAVKCSRCGY 171
Query: 339 VNGMVKKAGTMLGIVHDRSKIVDGTSEECRSAISHKKESKASFHVVHVLNPVRVLALFKR 518
+NG+VKKA ++LGI+HDRSKI DG+ EEC SAISH KESKASF VV +LNPV+VL+LFKR
Sbjct: 172 MNGIVKKAVSVLGIIHDRSKIADGSLEECSSAISHTKESKASFSVVDILNPVKVLSLFKR 231
Query: 519 MLDEDCELLYLRDRPEKLLITDIAVPPIPIRPSVFTDGGARSNENDITARLSTIMRANAS 698
M+DEDC+LL L +RPEKL++T+I VPPI IRPSVF DGG +SNEND+T RL I++ANAS
Sbjct: 232 MMDEDCDLLNLAERPEKLVLTNIGVPPIAIRPSVFMDGGTQSNENDVTERLKRIIQANAS 291
Query: 699 LRQELQCTGSMSKCLADWELLQIEVAQYINSDVRGIPLSMQSSTPYRGFIQRLKGKQGRF 878
L QELQ TGS SKCLA W+ LQIEVAQYINSDVRG+PL+MQ++ P GF+QRLKGKQGRF
Sbjct: 292 LHQELQDTGSTSKCLAGWDYLQIEVAQYINSDVRGVPLAMQAARPLSGFVQRLKGKQGRF 351
Query: 879 RGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQVLTYPERVSHHNIEKLRQCVRNGP 1058
RGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMA++L+YPERVSHHNIEKLRQC+ NGP
Sbjct: 352 RGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAKILSYPERVSHHNIEKLRQCILNGP 411
Query: 1059 QKYPGANFIRYPDGSLMHLRYSSRKRAADELKYGYIVERHLEDGDVVLFNRQPSLHRMSI 1238
KYPGA IRYPDGS+ L +S RKR ADELKYGYIVERHLEDGDVVLFNRQPSLHRMSI
Sbjct: 412 FKYPGAKLIRYPDGSMRSLMFSGRKRFADELKYGYIVERHLEDGDVVLFNRQPSLHRMSI 471
Query: 1239 MSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPK 1418
M HRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPK
Sbjct: 472 MCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPK 531
Query: 1419 NGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIELWT 1598
NGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMD VDLPTPA+IKP+ELWT
Sbjct: 532 NGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWT 591
Query: 1599 GKQLFSVLVRPNARMRVFLNLTVLEKNYSK--SGESLCPNDGFVYFRNSELMSGQLGKAT 1772
GKQLF+VL+RP+A +RV+LNLTV+EK Y+K E++CP+DGFVYFRNSEL+SGQLGKAT
Sbjct: 592 GKQLFNVLLRPHANVRVYLNLTVMEKTYNKRRGKETMCPSDGFVYFRNSELISGQLGKAT 651
Query: 1773 LGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGELLNQQKK 1952
LGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPG LLN QK
Sbjct: 652 LGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKS 711
Query: 1953 ARIEEGYEACDELIQSYNKGNLKLQPGCDAAQTLEAEITGVLNKIRETAAKVCMEELHWR 2132
RIEEGYE C ELIQ YNKG LKLQPGC+AAQTLEAEITGVLNKIRET A VCMEELHWR
Sbjct: 712 KRIEEGYENCHELIQQYNKGKLKLQPGCNAAQTLEAEITGVLNKIRETTANVCMEELHWR 771
Query: 2133 NSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKMPAAKGFV 2312
NSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDR+LPHFPRKSK P AKGFV
Sbjct: 772 NSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKSKTPDAKGFV 831
Query: 2313 ANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNAS 2492
A+SFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLSI YD+TVRNA+
Sbjct: 832 ASSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQYDETVRNAN 891
Query: 2493 GGVVQFLYGDDGMDPARMEGKSGVPLNLERLYLKVKATCPARTQASLSPSEVLRIVEEKL 2672
G +VQFLYGDDGMDPARMEGK G PLN RL+LKVKATCPA ASLS ++ V ++L
Sbjct: 892 GSIVQFLYGDDGMDPARMEGKDGFPLNFNRLFLKVKATCPAGENASLSALQIEETV-KRL 950
Query: 2673 ERHDASPAGGCSDAFKKLLLDFVHKRIDMFSSTKRALQLDEKYAGDSNVNFLENIAANIS 2852
+ H+ S A GCSDAFK L F+ + + F +T+ AL L ++ G+ N++ E A NIS
Sbjct: 951 KEHNTS-AEGCSDAFKTNLSGFLEECKEKFKNTREALGLHGEHVGEENLDIQEKFAKNIS 1009
Query: 2853 GITSQQLQVFLETCITRYDSKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVT 3032
GITS+QLQVFL+TCI+RY KR EPGTQMTLKTFHFAGVASMNVT
Sbjct: 1010 GITSKQLQVFLDTCISRYQLKRIEAGTAIGAIGAHSIGEPGTQMTLKTFHFAGVASMNVT 1069
Query: 3033 LGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKGCVEKTVLGEVAKSMKIVMTSR 3212
LGVPRIKEIINGAK ISTPIITA LEC+N+VK+AR+VKG +E+T LG+VAKS+KIV+TSR
Sbjct: 1070 LGVPRIKEIINGAKRISTPIITAALECNNNVKTARMVKGRIERTTLGQVAKSIKIVLTSR 1129
Query: 3213 QASIVVTLDMERIHASQLRISAYSVKQSILQHPRTKLKTQHIEVLDDKKLRILPPEADRS 3392
A I V LDME I ASQL I + V++SIL++ R KLK QHI+VLD KL + P+ DRS
Sbjct: 1130 LALIAVALDMEGIQASQLSIDSNIVRESILRNRRIKLKQQHIKVLDAGKLEV-HPQGDRS 1188
Query: 3393 KLQFELHSLRATLPKVIVKGISTVERAVINKD-KGKYNLLVEGTNLQAVMGTPGVDGRKT 3569
+ FELH+L+ LP V+VKGI TVERAVINKD K KYNLLVEGT LQ VMGT GV GR+T
Sbjct: 1189 TIHFELHALKNLLPTVVVKGIETVERAVINKDNKVKYNLLVEGTGLQTVMGTEGVIGRET 1248
Query: 3570 TSNHIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLADLMTYKGEVLGITRF 3749
TSNHIIEV++TLGIEAARKCII+EIQYTMASHGMSIDIRHMMLLADLMT++GEVLGITRF
Sbjct: 1249 TSNHIIEVQQTLGIEAARKCIINEIQYTMASHGMSIDIRHMMLLADLMTFRGEVLGITRF 1308
Query: 3750 GIQKMKESVLMLASFEKTADHLFNASFNGRDDKIEGVSECIIMGIPMQIGTGILKVRQSV 3929
GIQKM +SVLMLASFEKTADHLFNAS +GRDDKIEGVSECIIMGIPMQ+GTGILKVRQ +
Sbjct: 1309 GIQKMDKSVLMLASFEKTADHLFNASVSGRDDKIEGVSECIIMGIPMQLGTGILKVRQRL 1368
Query: 3930 KQVVKLNYGLDPIIS 3974
+QV +L+YGLDPIIS
Sbjct: 1369 QQVPELSYGLDPIIS 1383
>ref|XP_007036220.1| DNA-directed RNA polymerase [Theobroma cacao]
gi|508773465|gb|EOY20721.1| DNA-directed RNA polymerase
[Theobroma cacao]
Length = 1395
Score = 1894 bits (4905), Expect = 0.0
Identities = 967/1354 (71%), Positives = 1106/1354 (81%), Gaps = 31/1354 (2%)
Frame = +3
Query: 6 KPIENALLDPHMGPANKSGICATCHGNFTSCPGHFGYLNLVLPVYNVGYFSSVIDILKSI 185
+PIE LLDP MGPANKSG CATCHGNF CPGH+GYL+L LPVYNVGY S+++DILK I
Sbjct: 51 RPIEGGLLDPRMGPANKSGKCATCHGNFADCPGHYGYLSLALPVYNVGYLSTILDILKCI 110
Query: 186 CKSCARILLSEKERRDYLKKMRNPRLEALQKSALAKQIVKKCKPT-------CHRCRYVN 344
CKSC+RI+L EK +DYLK+MR+P+++AL+K + K IVKKC C RC YVN
Sbjct: 111 CKSCSRIILDEKLCKDYLKRMRSPKIDALKKGDIMKSIVKKCSAMASSKAVKCWRCGYVN 170
Query: 345 GMVKKAGTMLGIVHDRSKIVDGTSEECRSAISHKKESKASFHVV-HVLNPVRVLALFKRM 521
G VKKA MLGI+HDRSKI D + EE RSAISH KESKASF+V +VLNPV+VL+LFKRM
Sbjct: 171 GTVKKAVAMLGIIHDRSKINDNSLEEFRSAISHTKESKASFNVATYVLNPVKVLSLFKRM 230
Query: 522 LDEDCELLYLRDRPEKLLITDIAVPPIPIRPSVFTDGGARSNENDITARLSTIMRANASL 701
D DCELLYL DRPEKL+IT+IAVPPIPIRPSV DG ++SNENDIT RL I++ANASL
Sbjct: 231 TDLDCELLYLSDRPEKLIITNIAVPPIPIRPSVIMDG-SQSNENDITERLKRIIQANASL 289
Query: 702 RQELQCTGSMSKCLADWELLQIEVAQYINSDVRGIPLSMQSSTPYRGFIQRLKGKQGRFR 881
RQEL T + KCL WE+LQ+EVAQYINSDVRG+P SMQ S P GF+QR+KGK GRFR
Sbjct: 290 RQELVETNAAFKCLGGWEMLQVEVAQYINSDVRGVPFSMQVSKPLSGFVQRIKGKHGRFR 349
Query: 882 GNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQVLTYPERVSHHNIEKLRQCVRNGPQ 1061
GNLSGKRVEYTGRTVISPDPNLKITEVAIPI MA++LTYPERVS+HNIEKLRQCVRNGP
Sbjct: 350 GNLSGKRVEYTGRTVISPDPNLKITEVAIPIHMARILTYPERVSNHNIEKLRQCVRNGPS 409
Query: 1062 KYPGANFIRYPDGSLMHLRYSSRKRAADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIM 1241
KYPGA +RYPDGS L RKR ADELK+G +V+RHLEDGD+VLFNRQPSLHRMSIM
Sbjct: 410 KYPGARMVRYPDGSARLLIGDYRKRLADELKFGCVVDRHLEDGDIVLFNRQPSLHRMSIM 469
Query: 1242 SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKN 1421
HRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTPKN
Sbjct: 470 CHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKN 529
Query: 1422 GEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIELWTG 1601
GEILVASTQDFLTSSFLITRKD FYDRAAFSL+CSYMGDGMD +DLPTPAL+KPIELWTG
Sbjct: 530 GEILVASTQDFLTSSFLITRKDIFYDRAAFSLICSYMGDGMDLIDLPTPALLKPIELWTG 589
Query: 1602 KQLFSVLVRPNARMRVFLNLTVLEKNYSK-----------SGESLCPNDGFVYFRNSELM 1748
KQLFSVL+RP+A +RV+LNL V E+NYSK E++CP+DGFVY RNSEL+
Sbjct: 590 KQLFSVLLRPHASVRVYLNLIVKERNYSKKIIKRIGNKEIEVETMCPDDGFVYIRNSELI 649
Query: 1749 SGQLGKATLGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPG 1928
GQLGKATLGNGNKDGL+SVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPG
Sbjct: 650 CGQLGKATLGNGNKDGLYSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPG 709
Query: 1929 ELLNQQKKARIEEGYEACDELIQSYNKGNLKLQPGCDAAQTLEAEITGVLNKIRETAAKV 2108
+ LN +K I Y+ CDE IQ++N+G LK +PG DAAQTLEA +T +LN IR+ KV
Sbjct: 710 KRLNDEKALTISGDYKKCDEEIQTFNEGKLKPKPGYDAAQTLEANVTAILNNIRDKTGKV 769
Query: 2109 CMEELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSK 2288
CM+ELHWRNSPLIMSQCGSKGS INISQMIACVGQQSVGGRRAPNGFIDRSLPHF R SK
Sbjct: 770 CMKELHWRNSPLIMSQCGSKGSAINISQMIACVGQQSVGGRRAPNGFIDRSLPHFHRGSK 829
Query: 2289 MPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHY 2468
PAAKGFVANSFY+GLTATEFFFHTM GREGLVDTAVKTA+TGYMSRRLIKALEDLSIHY
Sbjct: 830 TPAAKGFVANSFYSGLTATEFFFHTMAGREGLVDTAVKTAETGYMSRRLIKALEDLSIHY 889
Query: 2469 DDTVRNASGGVVQFLYGDDGMDPARMEGKSGVPLNLERLYLKVKATCPARTQASLSPSEV 2648
D+TVRNASG +VQF+YGDDGMDPA MEGKSG PLN +RL +KVKATCP Q L +
Sbjct: 890 DNTVRNASGCIVQFIYGDDGMDPACMEGKSGFPLNFDRLLMKVKATCPPIEQKCLHVGSI 949
Query: 2649 LRIVEEKLERHDASPAGGCSDAFKKLLLDFVHKRIDMFSSTKRALQLDEKYAGDSNVNFL 2828
++++EE+L +HD PAG CS+AFKK L F+ + + R ++L A S + L
Sbjct: 950 MQMLEEQLAKHD--PAGVCSEAFKKSLKGFLKSQT---NELDRVMKLVNNCAQKSEI--L 1002
Query: 2829 ENIAANISGITSQQLQVFLETCITRYDSKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHFA 3008
E + ISGI+ +QL+VF+ TCI+RY SK EPGTQMTLKTFHFA
Sbjct: 1003 EKVGHKISGISDRQLEVFVSTCISRYRSKVIEAGTAIGAIGAQSIGEPGTQMTLKTFHFA 1062
Query: 3009 GVASMNVTLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKGCVEKTVLGEVAKS 3188
GVASMN+T GVPRIKEIIN AK ISTP+ITA LE D++ A+IVKG +EKTVLG+VAKS
Sbjct: 1063 GVASMNITQGVPRIKEIINAAKRISTPVITAELEFDDNPNIAQIVKGRIEKTVLGQVAKS 1122
Query: 3189 MKIVMTSRQASIVVTLDMERIHASQLRISAYSVKQSILQHPRTKLKTQHIEVLDDKKLRI 3368
+KIV+TSR AS+V+TLDME I ++L I A VK+SILQ P+ KLK QH++VLD +KL +
Sbjct: 1123 IKIVITSRSASVVITLDMEIILDAELYIDANIVKESILQTPKIKLKEQHVKVLDGRKLEV 1182
Query: 3369 LPPEADRSKLQFELHSLRATLPKVIVKGISTVERAVI---NKDKGK---------YNLLV 3512
+PP ADRS++ FELHSL+ LP V+VKGI TVER V+ NK+K + LLV
Sbjct: 1183 VPP-ADRSQIHFELHSLKNLLPLVVVKGIKTVERTVVYDKNKEKKNQKEEETTKHFQLLV 1241
Query: 3513 EGTNLQAVMGTPGVDGRKTTSNHIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHM 3692
EGT LQAVMG G+DGR+T SNH++E+++ LGIEAARKCII EI TM HGM+ID RHM
Sbjct: 1242 EGTGLQAVMGIEGIDGRRTWSNHVMEMEQILGIEAARKCIIDEIAQTMEHHGMTIDRRHM 1301
Query: 3693 MLLADLMTYKGEVLGITRFGIQKMKESVLMLASFEKTADHLFNASFNGRDDKIEGVSECI 3872
MLLAD+MT++GEVLGITRFGIQKM +S+LMLASFE+TADHLFNA+ NGRDDKIEGV+ECI
Sbjct: 1302 MLLADVMTFRGEVLGITRFGIQKMDKSILMLASFERTADHLFNAAVNGRDDKIEGVTECI 1361
Query: 3873 IMGIPMQIGTGILKVRQSVKQVVKLNYGLDPIIS 3974
IMGIPMQIGTGILKV Q V L YG DP++S
Sbjct: 1362 IMGIPMQIGTGILKVIQRVDPPPMLRYGPDPVLS 1395
>ref|NP_001053175.1| Os04g0492300 [Oryza sativa Japonica Group]
gi|38346223|emb|CAE02045.2| OJ990528_30.3 [Oryza sativa
Japonica Group] gi|38347455|emb|CAD41360.2|
OSJNBa0076N16.24 [Oryza sativa Japonica Group]
gi|113564746|dbj|BAF15089.1| Os04g0492300 [Oryza sativa
Japonica Group] gi|116310339|emb|CAH67354.1|
OSIGBa0130B08.14 [Oryza sativa Indica Group]
gi|116310740|emb|CAH67535.1| H0425E08.3 [Oryza sativa
Indica Group] gi|215768005|dbj|BAH00234.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|218195112|gb|EEC77539.1| hypothetical protein
OsI_16437 [Oryza sativa Indica Group]
Length = 1383
Score = 1884 bits (4879), Expect = 0.0
Identities = 940/1334 (70%), Positives = 1099/1334 (82%), Gaps = 11/1334 (0%)
Frame = +3
Query: 6 KPIENALLDPHMGPANKSGICATCHGNFTSCPGHFGYLNLVLPVYNVGYFSSVIDILKSI 185
KP+ N LLD MG ANK G C+TCHG+F CPGHFGYL L LPV+NVG+F+ ++D+LK I
Sbjct: 56 KPVPNGLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCI 115
Query: 186 CKSCARILLSEKERRDYLKKMRNPRLEALQKSALAKQIVKKCKPT-CHRCRYVNGMVKKA 362
CKSC+R+LL EK+R ++LKKMRNP+ + LQKSA+ K++ KCK + C C ++NG+ KK
Sbjct: 116 CKSCSRVLLMEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKCKLSRCPWCGFINGVAKKG 175
Query: 363 GTMLGIVHDRSKIVDGTSEECRSAISHKKESKASFHVVHVLNPVRVLALFKRMLDEDCEL 542
L I+HD SK +DG++EE R A+SHKKE K S V +L+P VL+LFKRM DEDCEL
Sbjct: 176 RAGLIILHDCSKTLDGSTEELRDALSHKKE-KLSISAVRMLDPAIVLSLFKRMTDEDCEL 234
Query: 543 LYLRDRPEKLLITDIAVPPIPIRPSVFTDGGARSNENDITARLSTIMRANASLRQELQCT 722
L L DRPEKL++T+IAVPP+PIRPSVF GG SNE+ IT L +I N+ L++ LQ
Sbjct: 235 LNLGDRPEKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIANTNSILKENLQTG 294
Query: 723 GSMSKCLADWELLQIEVAQYINSDVRGIPLSMQSSTPYRGFIQRLKGKQGRFRGNLSGKR 902
G KC W+ LQ++V +YINSD +P S +RG +QRLKGK GRFRGNLSGKR
Sbjct: 295 GQFMKCFDCWQHLQLQVVEYINSDAPSLPESQ-----HRGLVQRLKGKTGRFRGNLSGKR 349
Query: 903 VEYTGRTVISPDPNLKITEVAIPILMAQVLTYPERVSHHNIEKLRQCVRNGPQKYPGANF 1082
EYTGRTVISPDPNL+ITEVAIPILMA+VLTYPERVS++NIEKLRQC+RNGP K+PGANF
Sbjct: 350 TEYTGRTVISPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANF 409
Query: 1083 IRYPDGSLMHLRYSSRKRAADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMSHRARIM 1262
I PDG+ +HL+Y R+ AA +LKYG +VERHLEDGD+VLFNRQPSLHRMSIMSHRARIM
Sbjct: 410 IIQPDGTKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIM 469
Query: 1263 PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 1442
PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS
Sbjct: 470 PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 529
Query: 1443 TQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIELWTGKQLFSVL 1622
TQDFLTSSFL+TRKD FYDR++FSL+CSY+GD M+ +DLPTPALIKPIELWTGKQLFSVL
Sbjct: 530 TQDFLTSSFLVTRKDNFYDRSSFSLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVL 589
Query: 1623 VRPNARMRVFLNLTVLEKNYSK------SGESLCPNDGFVYFRNSELMSGQLGKATLGNG 1784
VRPNA +VFLNLTV EK Y E++CPNDGFVYFRNSEL+SGQ+GKATLGNG
Sbjct: 590 VRPNACTKVFLNLTVKEKIYKTPKGSTLEPEAMCPNDGFVYFRNSELLSGQVGKATLGNG 649
Query: 1785 NKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGELLNQQKKARIE 1964
NKDG+FS L+RDYN+HAAA+CMNRLAK SAR+IGNHGFSIG+DDVQPGE LNQ+KK +I+
Sbjct: 650 NKDGMFSTLVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNQEKKMKID 709
Query: 1965 EGYEACDELIQSYNKGNLKLQPGCDAAQTLEAEITGVLNKIRETAAKVCMEELHWRNSPL 2144
GY+ C +LI SY+KG L+LQPGC+AAQTLE IT VLN+IRE A KVCM LHWRNSPL
Sbjct: 710 GGYKDCHDLIASYSKGALRLQPGCNAAQTLEQSITRVLNEIREEAGKVCMNTLHWRNSPL 769
Query: 2145 IMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKMPAAKGFVANSF 2324
IMSQCGSKGSPINISQM+ACVGQQSVGGRRAPNGFIDR+LPHFP SK PAAKGFVANSF
Sbjct: 770 IMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRTLPHFPINSKTPAAKGFVANSF 829
Query: 2325 YTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNASGGVV 2504
YTGLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLS+ YD TVRNASGG+V
Sbjct: 830 YTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVRNASGGIV 889
Query: 2505 QFLYGDDGMDPARMEGKSGVPLNLERLYLKVKATCPARTQASLSPSEVLRIVEEKLERHD 2684
QFLYGDDGMDPA+MEGK G PLNL++L++KV ATCP R Q +LSP E+L+I+ +KL HD
Sbjct: 890 QFLYGDDGMDPAKMEGKDGKPLNLDQLFMKVMATCPQRGQNTLSPGEILQILNDKLSEHD 949
Query: 2685 ASPAGGCSDAFKKLLLDFVHKRIDMFSSTKRALQLDEKYAGDSNVNFLENIAANISGITS 2864
AS GCS+ FK+LL F+ RI + ST+RAL LDE + G+ + +F E+IAANISGI+
Sbjct: 950 ASSDDGCSEKFKQLLTYFLEDRIKLLKSTRRALLLDEDHVGERHSSFEESIAANISGISV 1009
Query: 2865 QQLQVFLETCITRYDSKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVP 3044
+QLQVFL+TC++RY K+ EPGTQMTLKTFHFAGVASMNVTLGVP
Sbjct: 1010 KQLQVFLDTCLSRYHLKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVP 1069
Query: 3045 RIKEIINGAKNISTPIITATLECDNDVKSARIVKGCVEKTVLGEVAKSMKIVMTSRQASI 3224
RIKEIIN AK ISTPIITA L + DV SARIVKG +EK VLGEVA+++KIV+ S Q ++
Sbjct: 1070 RIKEIINAAKKISTPIITAELLSEKDVLSARIVKGSMEKAVLGEVAEAIKIVLKSSQPNL 1129
Query: 3225 VVTLDMERIHASQLRISAYSVKQSILQHPRTKLKTQHIEVLDDKKLRILPPEADRSKLQF 3404
VV LDM+RI A + ISA SV+ SIL HP+ KLK++H+ V+D KLRI P D+SKL +
Sbjct: 1130 VVKLDMQRIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDKSKLRIYPAGIDKSKLLY 1189
Query: 3405 ELHSLRATLPKVIVKGISTVERAVIN----KDKGKYNLLVEGTNLQAVMGTPGVDGRKTT 3572
ELH L++ LPKVIVKGI TVERAVI+ ++ +Y LLVEGTNL AVMGTPGVD KT
Sbjct: 1190 ELHHLKSMLPKVIVKGIPTVERAVISETGEENDKRYKLLVEGTNLLAVMGTPGVDAMKTK 1249
Query: 3573 SNHIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLADLMTYKGEVLGITRFG 3752
SNHI+EV TLGIEAAR+ II EIQYTM SHGM+ID RHMMLLADLMTYKGE+LGITR+G
Sbjct: 1250 SNHIMEVNRTLGIEAARRSIIDEIQYTMKSHGMNIDSRHMMLLADLMTYKGEILGITRYG 1309
Query: 3753 IQKMKESVLMLASFEKTADHLFNASFNGRDDKIEGVSECIIMGIPMQIGTGILKVRQSVK 3932
I KMK SVLMLASFEKTA+HLFNAS++GR+D+IEGVSECIIMGIPMQ+GTGILKVRQ +
Sbjct: 1310 IAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGILKVRQRLD 1369
Query: 3933 QVVKLNYGLDPIIS 3974
+ + Y DPI++
Sbjct: 1370 HLPEFKYQPDPILA 1383
>ref|XP_006653556.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Oryza
brachyantha]
Length = 1389
Score = 1878 bits (4864), Expect = 0.0
Identities = 934/1342 (69%), Positives = 1101/1342 (82%), Gaps = 19/1342 (1%)
Frame = +3
Query: 6 KPIENALLDPHMGPANKSGICATCHGNFTSCPGHFGYLNLVLPVYNVGYFSSVIDILKSI 185
+P+ N LLD MG ANK G C+TCHG+F CPGHFGYL L LPV+NVG+F+ ++D+LK I
Sbjct: 56 RPVPNGLLDTRMGAANKLGECSTCHGSFAECPGHFGYLKLALPVFNVGFFNCILDVLKCI 115
Query: 186 CKSCARILLSEKERRDYLKKMRNPRLEALQKSALAKQIVKKCKPT-CHRCRYVNGMVKKA 362
CK C+R+LL EK+R ++LKKMRNP+ + LQKSA+ K++ KCK + C C ++NG+ KK
Sbjct: 116 CKGCSRVLLVEKDRLEFLKKMRNPKADPLQKSAIMKKVRDKCKLSRCPWCGFINGVAKKG 175
Query: 363 GTMLGIVHDRSKIVDGTSEECRSAISHKKESKASFHVVHVLNPVRVLALFKRMLDEDCEL 542
L I+HD SK +DG++EE + A+SHKKE K SF VH+L+P VL+LFKRM DEDCEL
Sbjct: 176 RAGLIILHDCSKTLDGSTEELKEALSHKKE-KLSFSAVHMLDPATVLSLFKRMTDEDCEL 234
Query: 543 LYLRDRPEKLLITDIAVPPIPIRPSVFTDGGARSNENDITARLSTIMRANASLRQELQCT 722
L L DRPEKL++T+IAVPP+PIRPSVF GG SNE+ IT L +I N+ L++ LQ
Sbjct: 235 LNLGDRPEKLIVTEIAVPPVPIRPSVFVAGGRMSNEDSITVILKSIANTNSILKENLQTG 294
Query: 723 GSMSKCLADWELLQIEVAQYINSDVRGIPLSMQSSTPYRGFIQRLKGKQGRFRGNLSGKR 902
G KC W+ LQ++V +YINSD +P S +RG +QRLKGK GRFRGNLSGKR
Sbjct: 295 GQFMKCFDCWQHLQLQVVEYINSDAPSLPESQ-----HRGLVQRLKGKTGRFRGNLSGKR 349
Query: 903 VEYTGRTVISPDPNLKITEVAIPILMAQVLTYPERVSHHNIEKLRQCVRNGPQKYPGANF 1082
EYTGRTVISPDPNL+ITEVAIPILMA+VLTYPERVS++NIEKLRQC+RNGP K+PGANF
Sbjct: 350 TEYTGRTVISPDPNLRITEVAIPILMARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANF 409
Query: 1083 IRYPDGSLMHLRYSSRKRAADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMSHRARIM 1262
I DG+ +HL+Y R+ AA +LKYG +VERHLEDGD+VLFNRQPSLHRMSIMSHRARIM
Sbjct: 410 IIQTDGTKLHLKYCDRRIAARDLKYGCVVERHLEDGDIVLFNRQPSLHRMSIMSHRARIM 469
Query: 1263 PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 1442
PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS
Sbjct: 470 PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 529
Query: 1443 TQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIELWTGKQLFSVL 1622
TQDFLTSSFL+TRKD FYDR++F+L+CSY+GD M+ +DLPTPAL+KPIELWTGKQLFSVL
Sbjct: 530 TQDFLTSSFLVTRKDNFYDRSSFTLLCSYLGDAMENIDLPTPALVKPIELWTGKQLFSVL 589
Query: 1623 VRPNARMRVFLNLTVLEKNYSKSGESLCPNDGFVYFRNSELMSGQLGKATLGNGNKDGLF 1802
VRPNA +VFLNLTV EK YSKS E++CPNDGFVYFRNSEL+SGQ+GK TLGNGNKDG+F
Sbjct: 590 VRPNACTKVFLNLTVKEKIYSKSRETMCPNDGFVYFRNSELLSGQVGKKTLGNGNKDGMF 649
Query: 1803 SVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGELLNQQKKARIEEGYEAC 1982
S+L+RDYN+HAAA+CMNRLAK SAR+IGNHGFSIG+DDV+PGE L+QQKK +I+EGY+ C
Sbjct: 650 SILVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVRPGEHLDQQKKKKIDEGYKEC 709
Query: 1983 DELIQSYNKGNLKLQPGCDAAQTLEAEITGVLNKIRETAAKVCMEELHWRNSPLIMSQCG 2162
+LI S++KG L LQPGC+AAQTLE +IT VLNKIRE A +CM+ LHWRNSPLIMSQCG
Sbjct: 710 HDLITSFSKGALTLQPGCNAAQTLEHKITHVLNKIREAAGNICMDTLHWRNSPLIMSQCG 769
Query: 2163 SKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKMPAAKGFVANSFYTGLT- 2339
SKGSPINISQM+ CVGQQSVGG RAPNGFIDR+LPHFP SK PAAKGFVANSFY GLT
Sbjct: 770 SKGSPINISQMVVCVGQQSVGGHRAPNGFIDRTLPHFPINSKTPAAKGFVANSFYNGLTA 829
Query: 2340 ----------------ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD 2471
ATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLS+ YD
Sbjct: 830 TEFFFHTMGGIYIVLPATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYD 889
Query: 2472 DTVRNASGGVVQFLYGDDGMDPARMEGKSGVPLNLERLYLKVKATCPARTQASLSPSEVL 2651
TVRNASGG+VQFLYGDDGMDPA+MEG+ G PLNL++L++KV ATCP R Q +LSP E+L
Sbjct: 890 QTVRNASGGIVQFLYGDDGMDPAKMEGEDGKPLNLDQLFMKVMATCPQRGQNTLSPGEIL 949
Query: 2652 RIVEEKLERHDASPAGGCSDAFKKLLLDFVHKRIDMFSSTKRALQLDEKYAG-DSNVNFL 2828
+I+ +KL HDAS GCS+ FK+LL DF+ RI + ST+RAL LDE + G DS++
Sbjct: 950 QILNDKLSEHDASSDDGCSEKFKQLLKDFLEDRIKLLKSTRRALCLDENHVGKDSSIE-- 1007
Query: 2829 ENIAANISGITSQQLQVFLETCITRYDSKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHFA 3008
E+IAANISGI+++QLQVFL+TC++RY SK+ EPGTQMTLKTFHFA
Sbjct: 1008 ESIAANISGISAKQLQVFLDTCLSRYHSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFA 1067
Query: 3009 GVASMNVTLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKGCVEKTVLGEVAKS 3188
GVASMNVTLGVPRIKEIIN AK ISTPIITA L DV SAR+VKG +EK VLGEVA+
Sbjct: 1068 GVASMNVTLGVPRIKEIINAAKKISTPIITAELLSGKDVLSARVVKGSMEKAVLGEVAED 1127
Query: 3189 MKIVMTSRQASIVVTLDMERIHASQLRISAYSVKQSILQHPRTKLKTQHIEVLDDKKLRI 3368
+KIV+ S Q ++VV LDM+RI + ISA SV+ SIL HPR KLK++H+ V+D KLR+
Sbjct: 1128 IKIVLKSSQPNLVVKLDMQRIEDLHMGISADSVQLSILNHPRIKLKSEHVRVIDKAKLRV 1187
Query: 3369 LPPEADRSKLQFELHSLRATLPKVIVKGISTVERAVINKDKGKYNLLVEGTNLQAVMGTP 3548
P D+SKL +ELH+L++ LPKVIVKGI TVERAVI++ KY+LLVEGTNL AVMGTP
Sbjct: 1188 YPTAIDKSKLLYELHNLKSMLPKVIVKGIPTVERAVISQTGDKYSLLVEGTNLLAVMGTP 1247
Query: 3549 GVDGRKTTSNHIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLADLMTYKGE 3728
GVD KT SNHI+EV TLGIEAAR+ II EIQYTM SHGM+ID RHMMLLADLMTYKGE
Sbjct: 1248 GVDAMKTKSNHIMEVNRTLGIEAARRSIIDEIQYTMTSHGMNIDSRHMMLLADLMTYKGE 1307
Query: 3729 VLGITRFGIQKMKESVLMLASFEKTADHLFNASFNGRDDKIEGVSECIIMGIPMQIGTGI 3908
+LGITR+GI KMK SVLMLASFEKTA+HLFNAS++GR+D+IEGVSECIIMGIPMQ+GTGI
Sbjct: 1308 ILGITRYGIAKMKSSVLMLASFEKTAEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGI 1367
Query: 3909 LKVRQSVKQVVKLNYGLDPIIS 3974
LKVRQ + + + Y DPI++
Sbjct: 1368 LKVRQRLDHLPEFKYQPDPILA 1389
>ref|XP_006365151.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Solanum tuberosum]
Length = 1394
Score = 1856 bits (4808), Expect = 0.0
Identities = 947/1344 (70%), Positives = 1091/1344 (81%), Gaps = 21/1344 (1%)
Frame = +3
Query: 3 RKPIENALLDPHMGPANKSGICATCHGNFTSCPGHFGYLNLVLPVYNVGYFSSVIDILKS 182
+KPI+N LLDP MGP NK+G C TCHGNF CPGH+GYL L LPVYNVGY +V+DILK
Sbjct: 55 KKPIQNGLLDPRMGPPNKNGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKC 114
Query: 183 ICKSCARILLSEKERRDYLKKMRNPRLEALQKSALAKQIVKKCKP--------TCHRCRY 338
ICK C+ ILL +KERRD LKKMRNPR E L+KS L K++VK+C TC +C Y
Sbjct: 115 ICKCCSSILLDDKERRDILKKMRNPRTEFLKKSELHKKVVKRCNAMAGGQKTATCSKCGY 174
Query: 339 VNGMVKKAGTMLGIVHDR-SKIVDGTSEECRSAISHKKESKASFHVVHVLNPVRVLALFK 515
+NGMVKK L I H++ ++I+D E AIS K+E +AS V L+P V +LFK
Sbjct: 175 MNGMVKKL--QLKITHEQGNRILD----EINVAISDKRELRASVSVPPELDPKVVYSLFK 228
Query: 516 RMLDEDCELLYLRDRPEKLLITDIAVPPIPIRPSVFTDGGARSNENDITARLSTIMRANA 695
M DEDCELLYL DRPEKLL+T I VPPI IRPSVF DGG +SNENDIT RL I++ANA
Sbjct: 229 NMSDEDCELLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANA 288
Query: 696 SLRQELQCTGSMSKCLADWELLQIEVAQYINSDVRGIPLSMQSSTPYRGFIQRLKGKQGR 875
SL QE+ S K L W LQ+EVAQYINSDVRG+PL MQ+ P GF QRLKGKQGR
Sbjct: 289 SLHQEMS-DSSPVKSLNLWIDLQMEVAQYINSDVRGVPLHMQAQRPLSGFTQRLKGKQGR 347
Query: 876 FRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQVLTYPERVSHHNIEKLRQCVRNG 1055
FRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQ+LTYPERVS HNIEKLRQCVRNG
Sbjct: 348 FRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNG 407
Query: 1056 PQKYPGANFIRYPDGSLMHLRYSSRKRAADELKYGYIVERHLEDGDVVLFNRQPSLHRMS 1235
P KYPGA FIR+PDGS + L ++SRKR ADELK+GYIV+RHLEDGD+VLFNRQPSLHRMS
Sbjct: 408 PNKYPGAKFIRHPDGSEISLMFTSRKRHADELKFGYIVDRHLEDGDIVLFNRQPSLHRMS 467
Query: 1236 IMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTP 1415
IMSHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTP
Sbjct: 468 IMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTP 527
Query: 1416 KNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIELW 1595
K+GEILVASTQDFLTSSFLITRKDTFY+RA+FSL+CSYMGD MDP DLP+PA IKP+ELW
Sbjct: 528 KSGEILVASTQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELW 587
Query: 1596 TGKQLFSVLVRPNARMRVFLNLTVLEKNYSKSGESLCPNDGFVYFRNSELMSGQLGKATL 1775
TGKQLF +L+RP ++MRV++NLTV EK+YS GE++CP+DGFVYFRNSEL+SGQLGKATL
Sbjct: 588 TGKQLFHMLLRPYSKMRVYVNLTVTEKSYSGKGETMCPSDGFVYFRNSELISGQLGKATL 647
Query: 1776 GNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGELLNQQKKA 1955
GNGNKDGL+SVLLRDY +HAAA CMNRLAKLSARWIGNHGFSIGIDDV PGE L +QK+
Sbjct: 648 GNGNKDGLYSVLLRDYKSHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQG 707
Query: 1956 RIEEGYEACDELIQSYNKGNLKLQPGCDAAQTLEAEITGVLNKIRETAAKVCMEELHWRN 2135
I Y+ C++ I +N+G L +QPGCDAAQTLEAE+T LNK+R+ K+CM+ L WRN
Sbjct: 708 EIHRNYKKCEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRN 767
Query: 2136 SPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKMPAAKGFVA 2315
SPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDRSLPHFP KSK PAAKGFVA
Sbjct: 768 SPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVA 827
Query: 2316 NSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNASG 2495
+SF+ GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD TVRNAS
Sbjct: 828 HSFFDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASA 887
Query: 2496 GVVQFLYGDDGMDPARMEGKSGVPLNLERLYLKVKATCPARTQASLSPSEVLRIVEEKLE 2675
+VQF+YGDDGMDP++ME K G PLN RL++KVKATCP + SLS SE+ IV E+L
Sbjct: 888 CIVQFMYGDDGMDPSQMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLS 947
Query: 2676 RHDASPAGGCSDAFKKLLLDFVHKRI-DMFSSTKRALQL-DEKYAGDSNVNFLENIAANI 2849
HD +P GGCS+AF+ L DF+ K + + + + +L L +E+Y GD +LE IA NI
Sbjct: 948 YHDMTPEGGCSEAFRSSLSDFLIKNLAETLKNLRESLLLGEEQYEGDDR-GYLEKIALNI 1006
Query: 2850 SGITSQQLQVFLETCITRYDSKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNV 3029
SGIT +QLQVFL TCI+RY KR EPGTQMTLKTFHFAGVASMNV
Sbjct: 1007 SGITKRQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNV 1066
Query: 3030 TLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKGCVEKTVLGEVAKSMKIVMTS 3209
TLGVPRIKEIIN AK I+TPIIT L ++ +AR++K +EKT+LG+VAKS+KIV+ S
Sbjct: 1067 TLGVPRIKEIINAAKKITTPIITTKLLSAANLTAARMIKARIEKTLLGQVAKSVKIVLAS 1126
Query: 3210 RQASIVVTLDMERIHASQLRISAYSVKQSILQHPRTKLKTQHIEVLDDKKLRILPPEADR 3389
R ASI ++LDME I SQL I AY+VKQSILQ + KLK I+VL+ +KL + P+A++
Sbjct: 1127 RLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVF-PQANK 1185
Query: 3390 SKLQFELHSLRATLPKVIVKGISTVERAVINKDKGK----------YNLLVEGTNLQAVM 3539
KL FELH L+ LP V+VKGI+TV+RAV+NK++ K Y LLVEGT L AVM
Sbjct: 1186 DKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKGETYELLVEGTGLLAVM 1245
Query: 3540 GTPGVDGRKTTSNHIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLADLMTY 3719
G GVDGR T SNHI+EV+ TLGIEAAR II EI YTM+SHGM+ID+RHMMLLADLMTY
Sbjct: 1246 GIEGVDGRYTKSNHIMEVQNTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTY 1305
Query: 3720 KGEVLGITRFGIQKMKESVLMLASFEKTADHLFNASFNGRDDKIEGVSECIIMGIPMQIG 3899
KGEVLGITR G+QKMK+SVLMLASFEKT DHLFNAS NGRDDKIEGV+ECIIMGIPM IG
Sbjct: 1306 KGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGIPMTIG 1365
Query: 3900 TGILKVRQSVKQVVKLNYGLDPII 3971
TG+ K+RQ V+Q V+LNY DPII
Sbjct: 1366 TGMFKLRQRVEQ-VELNYQPDPII 1388
>ref|XP_004251448.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Solanum
lycopersicum]
Length = 1390
Score = 1853 bits (4800), Expect = 0.0
Identities = 945/1344 (70%), Positives = 1088/1344 (80%), Gaps = 21/1344 (1%)
Frame = +3
Query: 3 RKPIENALLDPHMGPANKSGICATCHGNFTSCPGHFGYLNLVLPVYNVGYFSSVIDILKS 182
+KPI+N LLDP MGP NKSG C TCHGNF CPGH+GYL L LPVYNVGY +V+DILK
Sbjct: 55 KKPIQNGLLDPRMGPPNKSGCCETCHGNFRECPGHYGYLVLALPVYNVGYLGTVVDILKC 114
Query: 183 ICKSCARILLSEKERRDYLKKMRNPRLEALQKSALAKQIVKKCKP--------TCHRCRY 338
ICK C+ ILL +KERRD LKKMRNPR E L+KS L K++VK+C TC +C Y
Sbjct: 115 ICKCCSSILLDDKERRDILKKMRNPRTEFLKKSELHKRVVKRCNAMAGGQKTATCSKCGY 174
Query: 339 VNGMVKKAGTMLGIVHDR-SKIVDGTSEECRSAISHKKESKASFHVVHVLNPVRVLALFK 515
+NGMVKK L I H++ ++I+D E AIS K+E +AS V ++P V +LFK
Sbjct: 175 MNGMVKKL--QLKITHEQGNRILD----EINVAISDKRELRASVSVPPEIDPKVVYSLFK 228
Query: 516 RMLDEDCELLYLRDRPEKLLITDIAVPPIPIRPSVFTDGGARSNENDITARLSTIMRANA 695
M DEDCELLYL DRPEKLL+T I VPPI IRPSVF DGG +SNENDIT RL I++ANA
Sbjct: 229 NMSDEDCELLYLSDRPEKLLVTSIPVPPIAIRPSVFVDGGTQSNENDITERLKRIIQANA 288
Query: 696 SLRQELQCTGSMSKCLADWELLQIEVAQYINSDVRGIPLSMQSSTPYRGFIQRLKGKQGR 875
SL QE+ S K L W LQ+EVAQYINSDVRG+PL MQ P GF QRLKGKQGR
Sbjct: 289 SLHQEMS-DSSPVKSLNQWIDLQMEVAQYINSDVRGVPLQMQPPRPLSGFTQRLKGKQGR 347
Query: 876 FRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQVLTYPERVSHHNIEKLRQCVRNG 1055
FRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQ+LTYPERVS HNIEKLRQCVRNG
Sbjct: 348 FRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQILTYPERVSQHNIEKLRQCVRNG 407
Query: 1056 PQKYPGANFIRYPDGSLMHLRYSSRKRAADELKYGYIVERHLEDGDVVLFNRQPSLHRMS 1235
P KYPGA FIR+PDG+ M L +SSRKR ADELK+GYIV+RHLEDGD+VLFNRQPSLHRMS
Sbjct: 408 PNKYPGAKFIRHPDGNEMSLMFSSRKRYADELKFGYIVDRHLEDGDIVLFNRQPSLHRMS 467
Query: 1236 IMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTP 1415
IMSHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCTP
Sbjct: 468 IMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCTP 527
Query: 1416 KNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIELW 1595
K+GEILVASTQDFLTSSFLITRKDTFY+RA+FSL+CSYMGD MDP DLP+PA IKP+ELW
Sbjct: 528 KSGEILVASTQDFLTSSFLITRKDTFYNRASFSLICSYMGDAMDPTDLPSPAFIKPVELW 587
Query: 1596 TGKQLFSVLVRPNARMRVFLNLTVLEKNYSKSGESLCPNDGFVYFRNSELMSGQLGKATL 1775
TGKQLF VL+RP ++MRV++NLT+ EK+YS GE++C +DGFVYFRNSEL+SGQLGKATL
Sbjct: 588 TGKQLFHVLLRPYSKMRVYVNLTLTEKSYSGKGETMCSSDGFVYFRNSELISGQLGKATL 647
Query: 1776 GNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGELLNQQKKA 1955
GNGNKDGL+SVLLRDY +HAAA CMNRLAKLSARWIGNHGFSIGIDDV PGE L +QK+
Sbjct: 648 GNGNKDGLYSVLLRDYESHAAATCMNRLAKLSARWIGNHGFSIGIDDVTPGENLVKQKQG 707
Query: 1956 RIEEGYEACDELIQSYNKGNLKLQPGCDAAQTLEAEITGVLNKIRETAAKVCMEELHWRN 2135
I Y+ C++ I +N+G L +QPGCDAAQTLEAE+T LNK+R+ K+CM+ L WRN
Sbjct: 708 EIHRNYKKCEDCITQFNEGKLAVQPGCDAAQTLEAEVTMSLNKVRDDIGKICMKALDWRN 767
Query: 2136 SPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKMPAAKGFVA 2315
SPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAP+GFIDRSLPHFP KSK PAAKGFVA
Sbjct: 768 SPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRSLPHFPFKSKFPAAKGFVA 827
Query: 2316 NSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNASG 2495
+SF+ GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDL+++YD TVRNAS
Sbjct: 828 HSFFDGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLAVYYDSTVRNASA 887
Query: 2496 GVVQFLYGDDGMDPARMEGKSGVPLNLERLYLKVKATCPARTQASLSPSEVLRIVEEKLE 2675
+VQF+YGDDGMDP+RME K G PLN RL++KVKATCP + SLS SE+ IV E+L
Sbjct: 888 CIVQFMYGDDGMDPSRMEEKKGRPLNFSRLFMKVKATCPPGGEKSLSYSEICEIVNERLS 947
Query: 2676 RHDASPAGGCSDAFKKLLLDFVHKRI-DMFSSTKRALQL-DEKYAGDSNVNFLENIAANI 2849
HD +P GGCS+AF+ L DF+ K + + + + +L L +E+Y GD +LE I NI
Sbjct: 948 YHDMTPEGGCSEAFRASLSDFLIKSLAETLKNLRESLLLGEEQYEGDDR-GYLEKIVLNI 1006
Query: 2850 SGITSQQLQVFLETCITRYDSKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNV 3029
SGIT +QLQVFL TCI+RY KR EPGTQMTLKTFHFAGVASMNV
Sbjct: 1007 SGITKKQLQVFLNTCISRYHLKRLEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNV 1066
Query: 3030 TLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKGCVEKTVLGEVAKSMKIVMTS 3209
TLGVPRIKEIIN AK I+TPIITA L ++ +AR++K +EKT+LG+VAKS+KIV+ S
Sbjct: 1067 TLGVPRIKEIINAAKKITTPIITAKLLSAGNLTAARMIKARIEKTLLGQVAKSVKIVLAS 1126
Query: 3210 RQASIVVTLDMERIHASQLRISAYSVKQSILQHPRTKLKTQHIEVLDDKKLRILPPEADR 3389
R ASI ++LDME I SQL I AY+VKQSILQ + KLK I+VL+ +KL + P+A++
Sbjct: 1127 RLASIAISLDMETIQVSQLCIDAYTVKQSILQTSKIKLKEHQIKVLNPRKLEVF-PQANK 1185
Query: 3390 SKLQFELHSLRATLPKVIVKGISTVERAVINKDKGK----------YNLLVEGTNLQAVM 3539
KL FELH L+ LP V+VKGI+TV+RAV+NK++ K Y LLVEGT L AVM
Sbjct: 1186 DKLHFELHRLKNKLPAVVVKGITTVQRAVVNKEQQKDRKNDVKGETYELLVEGTGLLAVM 1245
Query: 3540 GTPGVDGRKTTSNHIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLADLMTY 3719
G GVDGR T SNHI+EV+ TLGIEAAR II EI YTM+SHGM+ID+RHMMLLADLMTY
Sbjct: 1246 GIEGVDGRYTKSNHIMEVQHTLGIEAARVSIIDEINYTMSSHGMTIDLRHMMLLADLMTY 1305
Query: 3720 KGEVLGITRFGIQKMKESVLMLASFEKTADHLFNASFNGRDDKIEGVSECIIMGIPMQIG 3899
KGEVLGITR G+QKMK+SVLMLASFEKT DHLFNAS NGRDDKIEGV+ECIIMGIPM IG
Sbjct: 1306 KGEVLGITRHGVQKMKDSVLMLASFEKTTDHLFNASVNGRDDKIEGVTECIIMGIPMTIG 1365
Query: 3900 TGILKVRQSVKQVVKLNYGLDPII 3971
TG+ K+RQ V+ V+LNY DP++
Sbjct: 1366 TGMFKLRQRVEH-VELNYQPDPMM 1388
>ref|XP_006488216.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like isoform
X1 [Citrus sinensis] gi|568870034|ref|XP_006488217.1|
PREDICTED: DNA-directed RNA polymerase III subunit
rpc1-like isoform X2 [Citrus sinensis]
Length = 1404
Score = 1850 bits (4793), Expect = 0.0
Identities = 954/1355 (70%), Positives = 1080/1355 (79%), Gaps = 31/1355 (2%)
Frame = +3
Query: 3 RKPIENALLDPHMGPANKSGICATCHGNFTSCPGHFGYLNLVLPVYNVGYFSSVIDILKS 182
R PIE LLDP MGPANKS CATCHG F++CPGH+GYL L LPVYNVGY S+++DILK
Sbjct: 59 RVPIEGGLLDPRMGPANKSCTCATCHGGFSNCPGHYGYLTLALPVYNVGYLSTILDILKC 118
Query: 183 ICKSCARILLSEKERRDYLKKMRNPRLEALQKSALAKQIVKKCKPT------CHRCRYVN 344
ICK C+R+LL EK +DYLKKMRNP++EAL+K+ L K IVKKC C RC Y+N
Sbjct: 119 ICKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCSTMASKAVKCPRCGYIN 178
Query: 345 GMVKKAGTMLGIVHDRSKIVDGTSEECRSAISHKKESKASFHVV-HVLNPVRVLALFKRM 521
GMVKKA +LGI+HDRSK+ + +E SAI+H KESKA+ +V ++LNPV VL LFKRM
Sbjct: 179 GMVKKAVAVLGIIHDRSKVTESL-QEFASAITHTKESKAAVNVATYILNPVNVLFLFKRM 237
Query: 522 LDEDCELLYLRDRPEKLLITDIAVPPIPIRPSVFTDGGARSNENDITARLSTIMRANASL 701
D DCE+LYL +RPEKL+IT+IAVPPI IRPSV DG ++SNENDIT RL I++ NASL
Sbjct: 238 TDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMDG-SQSNENDITERLKRIIQTNASL 296
Query: 702 RQELQCTGSMSKCLADWELLQIEVAQYINSDVRGIPLSMQSSTPYRGFIQRLKGKQGRFR 881
+QEL S K LA WE LQ+EVAQYINSDVRG+P SMQ + P GF+QRLKGKQGRFR
Sbjct: 297 QQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQVARPLSGFVQRLKGKQGRFR 356
Query: 882 GNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQVLTYPERVSHHNIEKLRQCVRNGPQ 1061
GNLSGKRVEYTGRTVISPDPNLKITEVAIPI MA++LTYPERVS HNIEKLRQC++NGP
Sbjct: 357 GNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSDHNIEKLRQCIQNGPD 416
Query: 1062 KYPGANFIRYPDGSLMHLRYSSRKRAADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIM 1241
KYPGA IRYPDG+ L R + A ELK G IV+RHLEDGDVVLFNRQPSLHRMSIM
Sbjct: 417 KYPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDVVLFNRQPSLHRMSIM 476
Query: 1242 SHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKN 1421
HRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL+LMGVQNNLCTPKN
Sbjct: 477 CHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVQNNLCTPKN 536
Query: 1422 GEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIELWTG 1601
GEILVASTQDFLTSSFLITRKDTFYDRAAFSLMC YMGDGMD VDLPTPA++KP+ELWTG
Sbjct: 537 GEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVDLPTPAILKPVELWTG 596
Query: 1602 KQLFSVLVRPNARMRVFLNLTVLEKNYSKS-----------GESLCPNDGFVYFRNSELM 1748
KQLFSVL+RP+A MRV++NLTV EK YS E++CPNDGFVYFRNSEL+
Sbjct: 597 KQLFSVLIRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETMCPNDGFVYFRNSELI 656
Query: 1749 SGQLGKATLGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPG 1928
SGQLGKATLGNGNKDGL+SVLLRDY AHA + CMNRLAKLSARWIGNHGFSIGIDDVQP
Sbjct: 657 SGQLGKATLGNGNKDGLYSVLLRDYGAHATSGCMNRLAKLSARWIGNHGFSIGIDDVQPK 716
Query: 1929 ELLNQQKKARIEEGYEACDELIQSYNKGNLKLQPGCDAAQTLEAEITGVLNKIRETAAKV 2108
+ L+ +K I E YE C+ I+ YN+G L+L+PGCDAAQTLEA IT +LN+IRE A K
Sbjct: 717 KELSDKKGKLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAVITDILNRIREDAGKA 776
Query: 2109 CMEELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSK 2288
CM L WRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAPNGFIDRSLPHFPRK+K
Sbjct: 777 CMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFIDRSLPHFPRKAK 836
Query: 2289 MPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHY 2468
PAAKGFVANSFY+GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSI Y
Sbjct: 837 EPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIQY 896
Query: 2469 DDTVRNASGGVVQFLYGDDGMDPARMEGKSGVPLNLERLYLKVKATCPARTQASLSPSEV 2648
D++VRNA G +VQFLYGDDGMDPA MEGKSG PLN +RL +KVKATCP Q LSP +V
Sbjct: 897 DNSVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKATCPPAGQRYLSPQQV 956
Query: 2649 LRIVEEKLERHDASPAGGCSDAFKKLLLDFVHKRIDMFSSTKRALQLDEKYAGDSNVNFL 2828
IVE++L + CS+AF L F + D + ++ E D L
Sbjct: 957 SEIVEKQLAAYGKE---SCSEAFLNSLRKFFEGQQDKLD---KKIKFVEDIGWDDKSQIL 1010
Query: 2829 ENIAANISGITSQQLQVFLETCITRYDSKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHFA 3008
E + SGIT +QL+VF++TC +RY KR EPGTQMTLKTFHFA
Sbjct: 1011 EEVTHKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSIGEPGTQMTLKTFHFA 1070
Query: 3009 GVASMNVTLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKGCVEKTVLGEVAKS 3188
GVASMN+T GVPRIKEIINGAK ISTPIITA LEC+++ +AR+VKG +EKT+LG+VAKS
Sbjct: 1071 GVASMNITQGVPRIKEIINGAKRISTPIITAELECNDNENAARVVKGRIEKTLLGQVAKS 1130
Query: 3189 MKIVMTSRQASIVVTLDMERIHASQLRISAYSVKQSILQHPRTKLKTQHIEVLDDKKLRI 3368
+KIVMTSR ASIV+ LDME I + L I+A VK+SI+Q P+ KLK QHI+VLD +KL I
Sbjct: 1131 IKIVMTSRLASIVIALDMETIQDAHLCINADIVKESIVQTPKIKLKQQHIKVLDFRKLEI 1190
Query: 3369 LPPEADRSKLQFELHSLRATLPKVIVKGISTVERAVI------------NKDKGKYNLLV 3512
PP D+SK+ FEL+SL+ LP VIVKGI TVER VI N +K KY LLV
Sbjct: 1191 FPP-VDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEKEKEKRKVKENGEKKKYRLLV 1249
Query: 3513 EGTNLQAVMGTPGVDGRKTTSNHIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHM 3692
EGT LQAVMG G+DG KT SNHI EV++TLGIEAAR CII EI TM +HGMSID RHM
Sbjct: 1250 EGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEINETMKAHGMSIDKRHM 1309
Query: 3693 MLLADLMTYKGEVLGITRFGIQKMKESVLMLASFEKTADHLFNASFNGRDDKIEGVSECI 3872
MLLADLMT++GEVLGITRFGIQKM +SVLMLASFEKTADHLFNAS NGRDD+IEGVSECI
Sbjct: 1310 MLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDRIEGVSECI 1369
Query: 3873 IMGIPMQIGTGILKVRQSVKQVVKLNYGL-DPIIS 3974
IMGIPM +GTGILK+RQ L YG DPI+S
Sbjct: 1370 IMGIPMPLGTGILKIRQRDAVPPMLKYGAPDPIMS 1404
>ref|XP_004976057.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Setaria
italica]
Length = 1397
Score = 1850 bits (4792), Expect = 0.0
Identities = 928/1348 (68%), Positives = 1094/1348 (81%), Gaps = 25/1348 (1%)
Frame = +3
Query: 6 KPIENALLDPHMGPANKSGI---CATCHGNFTSCPGHFGYLNLVLPVYNVGYFSSVIDIL 176
KP+ N LLD MG A+K C+TCHG F CPGHFGYL L LPV+NVG+F+ ++D+L
Sbjct: 56 KPVPNGLLDMRMGLASKKDTELKCSTCHGPFAECPGHFGYLKLALPVFNVGFFNCILDVL 115
Query: 177 KSICKSCARILLSEKERRDYLKKMRNPRLEALQKSALAKQIVKKCKPTC-HRCRYVNGMV 353
K ICK C+R+LL+EK+RR++LKKMRNPR +ALQKSA+ K++ KCK TC RC Y NG+V
Sbjct: 116 KCICKGCSRVLLAEKDRREFLKKMRNPRADALQKSAIMKKVRDKCKLTCCPRCEYKNGVV 175
Query: 354 KKAGTMLGIVHDRSKIVDGTSEECRSAISHKKESKASFHVVHVLNPVRVLALFKRMLDED 533
KK L ++HD SKI+DG +EE ++A+ HKKE K S V +L+P L+LF+RM+DED
Sbjct: 176 KKGRVGLIVIHDCSKILDGHTEELKNALQHKKE-KVSTSSVRMLDPATALSLFRRMVDED 234
Query: 534 CELLYLRDRPEKLLITDIAVPPIPIRPSVFTDGGARSNENDITARLSTIMRANASLRQEL 713
CELL L DRPEKL++T+IAVPP+PIRPSV SNE+ ITA L +I+ N+ L++ L
Sbjct: 235 CELLNLGDRPEKLIVTEIAVPPVPIRPSVVVGNTRTSNEDSITAILKSIVNTNSILKETL 294
Query: 714 QCTGSMSKCLADWELLQIEVAQYINSDVRGIPLSMQSSTPYRGFIQRLKGKQGRFRGNLS 893
Q G SKC W+ LQ++V +++NSD +P S +RG +QRLKGK GRFRGNLS
Sbjct: 295 QTGGLFSKCFDCWQQLQLQVVEFVNSDAPCLPESQ-----HRGLVQRLKGKTGRFRGNLS 349
Query: 894 GKRVEYTGRTVISPDPNLKITEVAIPILMAQVLTYPERVSHHNIEKLRQCVRNGPQKYPG 1073
GKR EYTGRTVISPDPNL+ITEVAIP+LMA+VLTYPERVS++N+EKLRQC+RNGP K+PG
Sbjct: 350 GKRTEYTGRTVISPDPNLRITEVAIPVLMARVLTYPERVSNYNLEKLRQCIRNGPYKHPG 409
Query: 1074 ANFIRYPDGSLMHLRYSSRKRAADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMSHRA 1253
ANFI PDG+ + L+Y R+ A +LK GY VERHLEDGDVVLFNRQPSLHRMSIMSHRA
Sbjct: 410 ANFIITPDGTKLSLKYGDRRIHARDLKCGYTVERHLEDGDVVLFNRQPSLHRMSIMSHRA 469
Query: 1254 RIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEIL 1433
RIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEIL
Sbjct: 470 RIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEIL 529
Query: 1434 VASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIELWTGKQLF 1613
VASTQDFLTSSFL+TRKD FYDR++F+L+CSY+GD M+ +DLPTPALIKPIELWTGKQLF
Sbjct: 530 VASTQDFLTSSFLVTRKDAFYDRSSFALLCSYVGDAMENIDLPTPALIKPIELWTGKQLF 589
Query: 1614 SVLVRPNARMRVFLNLTVLEKNYSKSGE----------------SLCPNDGFVYFRNSEL 1745
SVLVRPNAR +VFLNL V EK YSK E ++CPNDG+VYFRNSEL
Sbjct: 590 SVLVRPNARTKVFLNLAVKEKIYSKKKEKKEGEEEEKETMCGRETMCPNDGYVYFRNSEL 649
Query: 1746 MSGQLGKATLGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQP 1925
+SGQ+GKATLGNGNKDG++SVLLRDYN+HAAA+CMNRLAK SAR+IGNHGFSIG+DDVQP
Sbjct: 650 LSGQVGKATLGNGNKDGIYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQP 709
Query: 1926 GELLNQQKKARIEEGYEACDELIQSYNKGNLKLQPGCDAAQTLEAEITGVLNKIRETAAK 2105
GE LN+QKK +I+EGY+ C +LI + KG L L PGC+AAQTLE +ITGVLN+IR A
Sbjct: 710 GEHLNRQKKKKIDEGYKQCHDLISLFAKGALALHPGCNAAQTLEHKITGVLNEIRTAAGN 769
Query: 2106 VCMEELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKS 2285
VCM+ LHWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GFIDR+LPHFP S
Sbjct: 770 VCMDTLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRTLPHFPINS 829
Query: 2286 KMPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIH 2465
K PAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLS+
Sbjct: 830 KTPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVF 889
Query: 2466 YDDTVRNASGGVVQFLYGDDGMDPARMEGKSGVPLNLERLYLKVKATCPARTQASLSPSE 2645
YD TVRNASGG+VQFLYGDDGMDPA+MEGK G PLNL++L++KV ATCP R +LSP +
Sbjct: 890 YDQTVRNASGGIVQFLYGDDGMDPAKMEGKDGTPLNLDQLFMKVTATCPHRGLDTLSPDD 949
Query: 2646 VLRIVEEKLERHDASPAGGCSDAFKKLLLDFVHKRIDMFSSTKRALQLDEKYAGDSNVNF 2825
+ +++E+KL +H S GGCS+ FK+ L F+ +RI + T++AL LDEK+ G ++
Sbjct: 950 IKQMLEDKLTQHKTSSDGGCSEEFKECLKKFLEERIQLLKCTRKALHLDEKHVGKNDSCI 1009
Query: 2826 LENIAANISGITSQQLQVFLETCITRYDSKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHF 3005
E IAANISGI+++QLQVFL+TC +RY+SK EPGTQMTLKTFHF
Sbjct: 1010 EEIIAANISGISAKQLQVFLDTCFSRYNSKAIEAGASIGAIGAQSIGEPGTQMTLKTFHF 1069
Query: 3006 AGVASMNVTLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKGCVEKTVLGEVAK 3185
AGVASMNVTLGVPRIKEIIN AK ISTPIIT L DV SARIVKG +EK VLGEVA
Sbjct: 1070 AGVASMNVTLGVPRIKEIINAAKKISTPIITTELLSRKDVLSARIVKGAMEKAVLGEVAS 1129
Query: 3186 SMKIVMTSRQASIVVTLDMERIHASQLRISAYSVKQSILQHPRTKLKTQHIEVLDDKKLR 3365
++KIV+ S Q ++VV LDM+ I A + ISA SV+ SIL HP+ KLK++H+ V+D KLR
Sbjct: 1130 AIKIVLKSSQPNLVVKLDMQLIEALHMGISADSVQLSILNHPKIKLKSEHVRVIDRAKLR 1189
Query: 3366 ILPPEADRSKLQFELHSLRATLPKVIVKGISTVERAVINKDK-----GKYNLLVEGTNLQ 3530
I P D+SKLQ ELH+L+A LPKVIVKGI TVER VI++ K KYNLLVEGTNL
Sbjct: 1190 IYPAGTDKSKLQLELHNLKAMLPKVIVKGIPTVERVVIDERKKEGKLEKYNLLVEGTNLL 1249
Query: 3531 AVMGTPGVDGRKTTSNHIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLADL 3710
AVMGTPGVD R T SNHI+E+ TLGIEAAR+ II EIQYTM SHGM+ID+RHMMLLADL
Sbjct: 1250 AVMGTPGVDARNTKSNHIMEMNSTLGIEAARRSIIDEIQYTMKSHGMNIDVRHMMLLADL 1309
Query: 3711 MTYKGEVLGITRFGIQKMKESVLMLASFEKTADHLFNASFNGRDDKIEGVSECIIMGIPM 3890
MTYKGEVLGITR+GI KMK SVLMLASFEKT++HLFNAS++GR+D+IEGVSECIIMGIPM
Sbjct: 1310 MTYKGEVLGITRYGIAKMKTSVLMLASFEKTSEHLFNASYSGREDEIEGVSECIIMGIPM 1369
Query: 3891 QIGTGILKVRQSVKQVVKLNYGLDPIIS 3974
Q+GTGILKVRQ + + +L Y DPI+S
Sbjct: 1370 QLGTGILKVRQRLDHLPELKYQPDPILS 1397
>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
sativus]
Length = 1400
Score = 1849 bits (4790), Expect = 0.0
Identities = 941/1355 (69%), Positives = 1085/1355 (80%), Gaps = 31/1355 (2%)
Frame = +3
Query: 3 RKPIENALLDPHMGPANKSGICATCHGNFTSCPGHFGYLNLVLPVYNVGYFSSVIDILKS 182
RKPI+ LLDP MGPANK CATCH NF CPGH+GY+NL LPV+NVGYF+++++ILK
Sbjct: 56 RKPIDGGLLDPRMGPANKGCKCATCHANFGDCPGHYGYVNLALPVFNVGYFTTILEILKC 115
Query: 183 ICKSCARILLSEKERRDYLKKMRNPRLEALQKSALAKQIVKKCKPT--------CHRCRY 338
ICKSC+RILL EK +D+L+KMRNP+LEAL+K L K+I+KKC C RC Y
Sbjct: 116 ICKSCSRILLEEKLFKDFLRKMRNPKLEALRKVDLVKKIIKKCSTLTTGNKSTRCSRCGY 175
Query: 339 VNGMVKKAGTMLGIVHDRSKIVDG--TSEECRSAISHKKESKASFHVVHVLNPVRVLALF 512
+NG VKKA +MLGI+H R++ D SE+ R+ + + +LNP RVL LF
Sbjct: 176 LNGSVKKAVSMLGILHYRARSKDAGVVSEDLRAPYNVSND---------ILNPFRVLCLF 226
Query: 513 KRMLDEDCELLYLRDRPEKLLITDIAVPPIPIRPSVFTDGGARSNENDITARLSTIMRAN 692
+RM DEDCELL+L +RPEKL+IT++ VPPI IRPSV DG ++SNENDIT RL I++ N
Sbjct: 227 QRMSDEDCELLFLSNRPEKLIITNVLVPPIAIRPSVIMDG-SQSNENDITERLKRIIQQN 285
Query: 693 ASLRQELQCTGSMSKCLADWELLQIEVAQYINSDVRGIPLSMQSSTPYRGFIQRLKGKQG 872
AS+ QEL + S +KCL W++LQ EVAQ INSDVRGIP SMQ S P GF+QRLKGKQG
Sbjct: 286 ASVSQELSTSNSQAKCLESWDMLQSEVAQLINSDVRGIPFSMQVSKPLAGFVQRLKGKQG 345
Query: 873 RFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQVLTYPERVSHHNIEKLRQCVRN 1052
RFRGNL GKRVE+TGRTVISPDPNLKITEVA+PI MA++LTYPERV+ HNIEKLRQCV N
Sbjct: 346 RFRGNLCGKRVEFTGRTVISPDPNLKITEVAVPIHMARILTYPERVTRHNIEKLRQCVSN 405
Query: 1053 GPQKYPGANFIRYPDGSLMHLRYSSRKRAADELKYGYIVERHLEDGDVVLFNRQPSLHRM 1232
GP KYPGA +R+ DGS+ L S RKR ADELKYG IVERHLEDGDVVLFNRQPSLHRM
Sbjct: 406 GPDKYPGARMLRHLDGSMRSLMISGRKRLADELKYGEIVERHLEDGDVVLFNRQPSLHRM 465
Query: 1233 SIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCT 1412
SIM HR R+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA++LMGVQNNLCT
Sbjct: 466 SIMCHRVRVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAILLMGVQNNLCT 525
Query: 1413 PKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIEL 1592
PKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMD VDLPTPAL+KPIEL
Sbjct: 526 PKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDLVDLPTPALVKPIEL 585
Query: 1593 WTGKQLFSVLVRPNARMRVFLNLTVLEKNYS------KSGESLCPNDGFVYFRNSELMSG 1754
WTGKQLFSVLVRP+A M+V+LNLTV EK+YS K E++CPNDGFVYFRNSEL+SG
Sbjct: 586 WTGKQLFSVLVRPHASMKVYLNLTVKEKSYSKVKGNEKERETMCPNDGFVYFRNSELISG 645
Query: 1755 QLGKATLGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGEL 1934
Q+GKATLGNGNKDGL+SVLLRDY AHAAA CMNRLAKLSARWIGNHGFSIGIDDVQPG+
Sbjct: 646 QVGKATLGNGNKDGLYSVLLRDYKAHAAAVCMNRLAKLSARWIGNHGFSIGIDDVQPGDQ 705
Query: 1935 LNQQKKARIEEGYEACDELIQSYNKGNLKLQPGCDAAQTLEAEITGVLNKIRETAAKVCM 2114
L ++K+ I EGY CD+ I +N GNL + GCDAAQ+LE++IT +LN IRE A VCM
Sbjct: 706 LVKKKQTTILEGYRDCDKQINLFNTGNLPPEAGCDAAQSLESKITQILNGIREATANVCM 765
Query: 2115 EELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKMP 2294
+ LHWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GFIDRSLPHF RK+K P
Sbjct: 766 QNLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRKAKTP 825
Query: 2295 AAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDD 2474
AAKGFVANSFY+GLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYD
Sbjct: 826 AAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDS 885
Query: 2475 TVRNASGGVVQFLYGDDGMDPARMEGKSGVPLNLERLYLKVKATCPARTQASLSPSEVLR 2654
+VRNA G +VQF YGDDGMDPA+MEGKSG PLN ERL+LK KATCP+ LSPSE
Sbjct: 886 SVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKAKATCPSDGNKILSPSEFSE 945
Query: 2655 IVEEKLERHDASPAGGCSDAFKKLLLDFVHKRIDMFSSTKRALQLDEKYAGD-------- 2810
VE++L + DASP GCS AF L F++K ++ + L D + A D
Sbjct: 946 TVEDRLSKDDASPECGCSPAFVGSLKIFLNKYVEAQKKSWGTLLADNESAVDKSIISSSD 1005
Query: 2811 -SNVNFLENIAANISGITSQQLQVFLETCITRYDSKRXXXXXXXXXXXXXXXXEPGTQMT 2987
N+ + NI+G+T +QLQVFL+TC++RY +K+ EPGTQMT
Sbjct: 1006 NDNIVIRNKVVQNIAGVTHRQLQVFLDTCLSRYHTKKIEAGTAIGAIGAQSIGEPGTQMT 1065
Query: 2988 LKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKGCVEKTV 3167
LKTFHFAGVASMNVTLGVPRIKEIINGAK ISTPI+TA L D++V AR+VK +EKT
Sbjct: 1066 LKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAALTHDDNVNIARMVKARIEKTN 1125
Query: 3168 LGEVAKSMKIVMTSRQASIVVTLDMERIHASQLRISAYSVKQSILQHPRTKLKTQHIEVL 3347
LG++AK ++IVM+SR A I + LDME+I ++L + A VKQ+IL P+ KLK +HI VL
Sbjct: 1126 LGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANVVKQAILVTPKLKLKHEHINVL 1185
Query: 3348 DDKKLRILPPEADRSKLQFELHSLRATLPKVIVKGISTVERAVINKDKG------KYNLL 3509
DD+KLR+LP +ADR+KL F LH L+ LP V+VKGI TV RAVI ++K K++LL
Sbjct: 1186 DDRKLRVLPQDADRNKLHFNLHFLKNMLPGVVVKGIKTVGRAVIKEEKDKARNAKKFSLL 1245
Query: 3510 VEGTNLQAVMGTPGVDGRKTTSNHIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRH 3689
VEGT LQAVMGT GVDG T SNHIIEV++ LGIEAARKCII EI+YTM SHGMSIDIRH
Sbjct: 1246 VEGTGLQAVMGTEGVDGCNTKSNHIIEVQQVLGIEAARKCIIEEIKYTMESHGMSIDIRH 1305
Query: 3690 MMLLADLMTYKGEVLGITRFGIQKMKESVLMLASFEKTADHLFNASFNGRDDKIEGVSEC 3869
MMLL DLMT++GEVLGITRFGIQKM +SVLMLASFEKTADHLFNAS NGRDDKIEGVSEC
Sbjct: 1306 MMLLGDLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNASVNGRDDKIEGVSEC 1365
Query: 3870 IIMGIPMQIGTGILKVRQSVKQVVKLNYGLDPIIS 3974
+IMGIPM +GTG+LKVRQ V +L YG I+S
Sbjct: 1366 VIMGIPMPLGTGMLKVRQRVSVPQQLPYGPPAILS 1400
>ref|XP_002446717.1| hypothetical protein SORBIDRAFT_06g021120 [Sorghum bicolor]
gi|241937900|gb|EES11045.1| hypothetical protein
SORBIDRAFT_06g021120 [Sorghum bicolor]
Length = 1391
Score = 1836 bits (4756), Expect = 0.0
Identities = 920/1342 (68%), Positives = 1085/1342 (80%), Gaps = 19/1342 (1%)
Frame = +3
Query: 6 KPIENALLDPHMGPANKSGICATCHGNFTSCPGHFGYLNLVLPVYNVGYFSSVIDILKSI 185
KP+ N LLDP MG NK C+TCHG F+ CPGHFGYL L LPV+NVG+F+ ++D+LK I
Sbjct: 56 KPVPNGLLDPRMGVPNKREKCSTCHGEFSDCPGHFGYLKLALPVFNVGFFNCILDVLKCI 115
Query: 186 CKSCARILLSEKERRDYLKKMRNPRLEALQKSALAKQIVKKCKPTC-HRCRYVNGMVKKA 362
CKSC+R+LL EK+RR++LKKMRNPR +ALQKSA K++ KCK +C RC Y NG+VKK
Sbjct: 116 CKSCSRVLLFEKDRREFLKKMRNPRADALQKSATMKKVRDKCKLSCCPRCDYRNGVVKKG 175
Query: 363 GTMLGIVHDRSKIVDGTSEECRSAISHKKESKASFHVVHVLNPVRVLALFKRMLDEDCEL 542
L +VHD SK++DG +EE ++A+ +KKE K S + V VL+P VL+LF+RM DEDCEL
Sbjct: 176 RAGLIVVHDCSKVLDGHTEELKNALQNKKE-KVSANSVRVLDPATVLSLFRRMTDEDCEL 234
Query: 543 LYLRDRPEKLLITDIAVPPIPIRPSVFTDGGARSNENDITARLSTIMRANASLRQELQCT 722
L L DRPEKL++++IAVPP+PIRPSV SNE+ IT L +I+ N+ L++ L
Sbjct: 235 LNLGDRPEKLIVSEIAVPPVPIRPSVVVGSSRTSNEDSITVILKSIVNTNSILKETLHTG 294
Query: 723 GSMSKCLADWELLQIEVAQYINSDVRGIPLSMQSSTPYRGFIQRLKGKQGRFRGNLSGKR 902
G +KC W+ LQ++V +Y+NSD +P S +RG +QRLKGK GRFRGNLSGKR
Sbjct: 295 GPFTKCFDCWQYLQLQVVEYVNSDAPCLPDSQ-----HRGLVQRLKGKTGRFRGNLSGKR 349
Query: 903 VEYTGRTVISPDPNLKITEVAIPILMAQVLTYPERVSHHNIEKLRQCVRNGPQKYPGANF 1082
EYTGRTVISPDPNLKITEVAIP+LMA+VLTYPERVS++NIEKLRQC+RNGP KYPGANF
Sbjct: 350 TEYTGRTVISPDPNLKITEVAIPVLMARVLTYPERVSNYNIEKLRQCIRNGPFKYPGANF 409
Query: 1083 IRYPDGSLMHLRYSSRKRAADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMSHRARIM 1262
+ PDG L+Y R+ A +LK G IVERHLEDGDVVLFNRQPSLHRMSIMSHRARIM
Sbjct: 410 VTQPDGMKQSLKYGDRRITARDLKCGCIVERHLEDGDVVLFNRQPSLHRMSIMSHRARIM 469
Query: 1263 PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 1442
PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS
Sbjct: 470 PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 529
Query: 1443 TQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIELWTGKQLFSVL 1622
TQDFLTSSFL+TRKDTFYDR++F+L+CSY+GD M+ +DLPTPALIKPIELWTGKQLFSVL
Sbjct: 530 TQDFLTSSFLVTRKDTFYDRSSFTLLCSYLGDAMENIDLPTPALIKPIELWTGKQLFSVL 589
Query: 1623 VRPNARMRVFLNLTVLEKNYSKSG-------------ESLCPNDGFVYFRNSELMSGQLG 1763
VRPNA RVFLNL V EK YSK E++CPNDG+VYFRNSEL+SGQ+G
Sbjct: 590 VRPNAHTRVFLNLAVQEKIYSKKKGKKEAGEETMCGRETMCPNDGYVYFRNSELLSGQVG 649
Query: 1764 KATLGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGELLNQ 1943
KATLGNGNKDGL+SVLLRDYN+HAAA+CMNRLAK SAR+IGNHGFSIG+DDVQPGE LN+
Sbjct: 650 KATLGNGNKDGLYSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGEHLNR 709
Query: 1944 QKKARIEEGYEACDELIQSYNKGNLKLQPGCDAAQTLEAEITGVLNKIRETAAKVCMEEL 2123
QKK I+ GY+ C +LI + KG L L PGC+AAQTLE ITGVLN+IR A VCM+ L
Sbjct: 710 QKKKEIDGGYKKCHDLISLFAKGALALHPGCNAAQTLEHNITGVLNEIRSIAGNVCMDTL 769
Query: 2124 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKMPAAK 2303
HWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAP+GF++R+LPHFP SK PAAK
Sbjct: 770 HWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFLNRTLPHFPINSKTPAAK 829
Query: 2304 GFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVR 2483
GFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLS+ YD TVR
Sbjct: 830 GFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVR 889
Query: 2484 NASGGVVQFLYGDDGMDPARMEGKSGVPLNLERLYLKVKATCPARTQASLSPSEVLRIVE 2663
NASGG+VQFLYGDDGMDPA+MEGK G+PLNL++L++KV ATCP R +LSP + +++E
Sbjct: 890 NASGGIVQFLYGDDGMDPAKMEGKDGMPLNLDQLFMKVMATCPQRGSDTLSPEAIKQMLE 949
Query: 2664 EKLERHDASPAGGCSDAFKKLLLDFVHKRIDMFSSTKRALQLDEKYAGDSNVNFLENIAA 2843
+KL +HD S GGCS+ FKK L +F+ KRI++ T+RAL L E + + E++AA
Sbjct: 950 DKLLQHDTSSDGGCSEEFKKNLTEFLDKRIELMKCTRRALHLHEDHVEKKDSCVEESVAA 1009
Query: 2844 NISGITSQQLQVFLETCITRYDSKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASM 3023
ISGI+++QLQVFL+TC++RY SK+ EPGTQMTLKTFHFAGVASM
Sbjct: 1010 IISGISAKQLQVFLDTCLSRYQSKKIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASM 1069
Query: 3024 NVTLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKGCVEKTVLGEVAKSMKIVM 3203
NVTLGVPRIKEIIN A+ ISTPIITA L DV SARIVKG +EK VLGEVA +++IV+
Sbjct: 1070 NVTLGVPRIKEIINAARKISTPIITAQLLSKKDVLSARIVKGSMEKAVLGEVAVAIQIVL 1129
Query: 3204 TSRQASIVVTLDMERIHASQLRISAYSVKQSILQHPRTKLKTQHIEVLDDKKLRILPPEA 3383
S Q +++V LDM+ I + + ISA SV+ SIL HP+ KLK++H+ V+D KLRI P
Sbjct: 1130 KSSQPNLIVKLDMQLIESLHMGISADSVQLSILNHPKIKLKSEHVRVIDRAKLRIYPAGT 1189
Query: 3384 DRSKLQFELHSLRATLPKVIVKGISTVERAVINKDKGK-----YNLLVEGTNLQAVMGTP 3548
D+ KLQ ELH+L++ LPKVIVKGI TVER VI++ K K Y LLVEGTNL AVMGTP
Sbjct: 1190 DKRKLQLELHNLKSILPKVIVKGIPTVERVVIDEVKVKNETERYQLLVEGTNLLAVMGTP 1249
Query: 3549 GVDGRKTTSNHIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLADLMTYKGE 3728
GVD KT SNHI+E +TLGIEAAR+ II EIQYTM SHGM+ID RHMMLLADLMTYKGE
Sbjct: 1250 GVDATKTKSNHIMETNQTLGIEAARRSIIDEIQYTMKSHGMNIDRRHMMLLADLMTYKGE 1309
Query: 3729 VLGITRFGIQKMKESVLMLASFEKTADHLFNASFNGRDDKIEGVSECIIMGIPMQIGTGI 3908
+LGITR+GI KMK SVLMLASFEKT++HLFNAS++GR+D+IEGVSECIIMGIPMQ+GTGI
Sbjct: 1310 ILGITRYGIAKMKSSVLMLASFEKTSEHLFNASYSGREDQIEGVSECIIMGIPMQLGTGI 1369
Query: 3909 LKVRQSVKQVVKLNYGLDPIIS 3974
LKVRQ + V + Y DPI+S
Sbjct: 1370 LKVRQRLDHVPEFKYQPDPILS 1391
>ref|XP_006828249.1| hypothetical protein AMTR_s00023p00196820 [Amborella trichopoda]
gi|548832896|gb|ERM95665.1| hypothetical protein
AMTR_s00023p00196820 [Amborella trichopoda]
Length = 1383
Score = 1833 bits (4747), Expect = 0.0
Identities = 930/1330 (69%), Positives = 1077/1330 (80%), Gaps = 8/1330 (0%)
Frame = +3
Query: 6 KPIENALLDPHMGPANKSGICATCHGNFTSCPGHFGYLNLVLPVYNVGYFSSVIDILKSI 185
KP E+ +LD MG + KSG CATC G+F +CPGHFGYL L LPV++VGYF + I +L+ I
Sbjct: 57 KPAEHGVLDTRMGFSTKSGSCATCFGDFQTCPGHFGYLKLALPVFHVGYFRTTIIVLQCI 116
Query: 186 CKSCARILLSEKERRDYLKKMRNPRLEALQKSALAKQIVKKCKPT--CHRCRYVNGMVKK 359
CKSCARILL E+ER+ +LKK+RNPR E QK+ K+++ KCK C RC NG+VKK
Sbjct: 117 CKSCARILLFEEERKQFLKKIRNPRAELHQKNDFVKKVIDKCKRVRICPRCGDYNGVVKK 176
Query: 360 AGTMLGIVHDRSKI-VDGTSEECRSAISHKKESKASFHVVHVLNPVRVLALFKRMLDEDC 536
AG I HDRSK D ++EC++AIS K S + F++V L P R LALF+RM+DEDC
Sbjct: 177 AGPTFRISHDRSKANYDKLTKECKTAISQTKYSNSDFNMVENLTPQRALALFERMVDEDC 236
Query: 537 ELLYLRDRPEKLLITDIAVPPIPIRPSVFTDGGARSNENDITARLSTIMRANASLRQELQ 716
+LLYL DRPEKL+IT IAVPP IRP+ G+R NEN++T +L I++ N +L +
Sbjct: 237 DLLYLYDRPEKLIITHIAVPPAGIRPTY--QSGSRLNENELTTKLWEIVQINHTLIDHVN 294
Query: 717 CTGSMSKCLADWELLQIEVAQYINSDVRGIPLSMQSSTPYRGFIQRLKGKQGRFRGNLSG 896
+ W LLQ+ VA YINS++ +PL+ Q S G +QRLKGKQGRFR NL G
Sbjct: 295 KGNLPQYYMDTWVLLQVRVALYINSELPSLPLNYQPSKFEGGLVQRLKGKQGRFRSNLEG 354
Query: 897 KRVEYTGRTVISPDPNLKITEVAIPILMAQVLTYPERVSHHNIEKLRQCVRNGPQKYPGA 1076
KRV++TGRTVISPDPNLKITEVAIP LMAQ+LTY ERV+ HNIEKLRQCVRNGP KYPGA
Sbjct: 355 KRVDFTGRTVISPDPNLKITEVAIPRLMAQILTYKERVTIHNIEKLRQCVRNGPVKYPGA 414
Query: 1077 NFIRYPDGSLMHLRYSSRKRAADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMSHRAR 1256
NF+ G + LRY ++KR ADELK+G VERHLEDG++VLFNRQPSLHRMSIM HRAR
Sbjct: 415 NFV-ISGGDTLSLRYGNKKRKADELKFGDFVERHLEDGEIVLFNRQPSLHRMSIMCHRAR 473
Query: 1257 IMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILV 1436
+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMGVQ+NLCTPKNGEILV
Sbjct: 474 VMPWRTLRFNESVCNPYNADFDGDEMNIHVPQTEEARTEALMLMGVQHNLCTPKNGEILV 533
Query: 1437 ASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIELWTGKQLFS 1616
ASTQDFLTSS+LITRKDTFYDRA FSLMCSYMGDGM+ +DLPTPAL+KP+ELWTGKQLFS
Sbjct: 534 ASTQDFLTSSYLITRKDTFYDRATFSLMCSYMGDGMENIDLPTPALLKPVELWTGKQLFS 593
Query: 1617 VLVRPNARMRVFLNLTVLEKNYSKSGESLCPNDGFVYFRNSELMSGQLGKATLGNGNKDG 1796
VL+RP+A M+V++NL+++EKNYSK GE++C NDGFVY RNSEL+SGQLGKATLGNGNKDG
Sbjct: 594 VLIRPHAHMKVYVNLSLMEKNYSKGGETMCANDGFVYIRNSELISGQLGKATLGNGNKDG 653
Query: 1797 LFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGELLNQQKKARIEEGYE 1976
LFSVLLRDYN+HAAA+CMNRLAKLSARWIGNHGFSIGIDDV PG L +QK+ +I+ GY
Sbjct: 654 LFSVLLRDYNSHAAASCMNRLAKLSARWIGNHGFSIGIDDVLPGSHLTKQKEEQIKGGYS 713
Query: 1977 ACDELIQSYNKGNLKLQPGCDAAQTLEAEITGVLNKIRETAAKVCMEELHWRNSPLIMSQ 2156
CD I +Y+KG L L+PGC+AAQTLEAEIT VLN IR+ AAKVCMEELHWRNSPLIMSQ
Sbjct: 714 NCDAFIDAYDKGKLSLKPGCNAAQTLEAEITRVLNGIRDAAAKVCMEELHWRNSPLIMSQ 773
Query: 2157 CGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKMPAAKGFVANSFYTGL 2336
CGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPR K PAAKGFVANSFYTGL
Sbjct: 774 CGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRNDKTPAAKGFVANSFYTGL 833
Query: 2337 TATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNASGGVVQFLY 2516
TA EFFFHTMGGREGLVDTAVKTADTGY+SRRLIK+LEDLS HYDDTVRN+SG ++QF Y
Sbjct: 834 TAAEFFFHTMGGREGLVDTAVKTADTGYLSRRLIKSLEDLSTHYDDTVRNSSGTIIQFSY 893
Query: 2517 GDDGMDPARMEGKSGVPLNLERLYLKVKATCPARTQASLSPSEVLRIVEEKLERHDASPA 2696
GDDGMDPA+MEGKSGVPLNL+RL++K+KATCPA ASLSPSE+ IV ++L +HD +P
Sbjct: 894 GDDGMDPAKMEGKSGVPLNLDRLFMKIKATCPASVSASLSPSEISTIVNDRLSKHDMTPE 953
Query: 2697 GGCSDAFKKLLLDFVHKRIDMFSSTKRALQLDEKYAGDSNVNFLENIAANISGITSQQLQ 2876
GCS AFK+ L +F+ KR+D T+ L LDE + LE++AANISGI+ QQL+
Sbjct: 954 RGCSMAFKEELSNFIKKRMDAIKKTRNMLGLDEDCVDKEKFSGLEHVAANISGISRQQLR 1013
Query: 2877 VFLETCITRYDSKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVTLGVPRIKE 3056
VFLETCI+RY KR EPGTQMTLKTFHFAGVASMN+TLGVPRIKE
Sbjct: 1014 VFLETCISRYHLKRIEAGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITLGVPRIKE 1073
Query: 3057 IINGAKNISTPIITATLECDNDVKSARIVKGCVEKTVLGEVAKSMKIVMTSRQASIVVTL 3236
I+ +K ISTPIITATL CDND KSARIVKG +EKT+LGEVAK++KI +T QASI +TL
Sbjct: 1074 ILGASKKISTPIITATLVCDNDEKSARIVKGRIEKTLLGEVAKTVKISVTPTQASINITL 1133
Query: 3237 DMERIHASQLRISAYSVKQSILQH-----PRTKLKTQHIEVLDDKKLRILPPEADRSKLQ 3401
DM+RI A Q+ I A +V SI ++ RTKLK + L D KL+IL PE R ++
Sbjct: 1134 DMKRIEALQMAIDAKTVADSISENLKAKVSRTKLKVKPTFTLPD-KLKILLPEIGRKEVL 1192
Query: 3402 FELHSLRATLPKVIVKGISTVERAVINKDKGKYNLLVEGTNLQAVMGTPGVDGRKTTSNH 3581
+ LH L++ LPK+IVKGI TVERAVIN KGK NLLVEGTNL AVMGTPGVDGR TTSNH
Sbjct: 1193 YSLHLLQSLLPKIIVKGIPTVERAVINNVKGKLNLLVEGTNLLAVMGTPGVDGRNTTSNH 1252
Query: 3582 IIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLADLMTYKGEVLGITRFGIQK 3761
I+EV+ TLGIEAARK II EIQYTM SHGMSID+RHMMLLADLMT++G VLGI RFGI K
Sbjct: 1253 IVEVEGTLGIEAARKSIIDEIQYTMKSHGMSIDLRHMMLLADLMTFRGLVLGIQRFGITK 1312
Query: 3762 MKESVLMLASFEKTADHLFNASFNGRDDKIEGVSECIIMGIPMQIGTGILKVRQSVKQVV 3941
MKESVLMLASFE+TAD LF+A+ GR D I GVSECIIMG+PMQIGTGIL V+Q +Q+
Sbjct: 1313 MKESVLMLASFERTADILFDATTRGRVDTIAGVSECIIMGVPMQIGTGILSVQQRPEQLA 1372
Query: 3942 KLNYGLDPII 3971
KL YG DPII
Sbjct: 1373 KLTYGPDPII 1382
>ref|XP_003574945.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1392
Score = 1823 bits (4722), Expect = 0.0
Identities = 920/1344 (68%), Positives = 1080/1344 (80%), Gaps = 21/1344 (1%)
Frame = +3
Query: 6 KPIENALLDPHMGPANKSGICATCHGNFTSCPGHFGYLNLVLPVYNVGYFSSVIDILKSI 185
KP+ N LLDP MG ANK G CATCHG++ CPGHFGYL LVLPV+NVG+F++++D+LKSI
Sbjct: 56 KPVPNGLLDPRMGAANKFGECATCHGSYHECPGHFGYLKLVLPVFNVGFFNNILDVLKSI 115
Query: 186 CKSCARILLSEKERRDYLKKMRNPRLEALQKSALAKQIVKKCKPT-CHRCRYVNGMVKKA 362
CK C+RILL EK++R++LKKMRNPRLE L K+AL K++ KCK + C C Y+NG+ KK
Sbjct: 116 CKGCSRILLHEKDQREFLKKMRNPRLEPLHKAALMKKVRDKCKLSRCPSCGYINGVAKKG 175
Query: 363 GTMLGIVHDRSKIVDGTSEECRSAISHKKESKASFHVVHVLNPVRVLALFKRMLDEDCEL 542
L IVHD SK +DG++EE RSA+SHKKE K S VH L+P VL+LFKRM DEDCEL
Sbjct: 176 RPGLLIVHDCSKTLDGSTEELRSALSHKKE-KLSISSVHTLDPATVLSLFKRMTDEDCEL 234
Query: 543 LYLRDRPEKLLITDIAVPPIPIRPSVFTDGGARSNENDITARLSTIMRANASLRQELQCT 722
L L DRPEKL+IT+IAVPP+PIRPSVF GG SNE+ IT L I+ N+ L+ LQ
Sbjct: 235 LNLGDRPEKLIITEIAVPPVPIRPSVFVGGGRMSNEDGITCILRNIVNTNSILKGILQNG 294
Query: 723 GSMSKCLADWELLQIEVAQYINSDVRGIPLSMQSSTPYRGFIQRLKGKQGRFRGNLSGKR 902
+ KC W+LLQ++V +YINSD + + RG +QRLKGK GRFRGNLSGKR
Sbjct: 295 DPLMKCFDCWQLLQLQVVEYINSDAPSL-----TDPQNRGLVQRLKGKTGRFRGNLSGKR 349
Query: 903 VEYTGRTVISPDPNLKITEVAIPILMAQVLTYPERVSHHNIEKLRQCVRNGPQKYPGANF 1082
EYTGRTVISPDPNL+ITEVAIP+LMA+VLTYPERVS++NIEKLRQC+RNGP K+PGANF
Sbjct: 350 TEYTGRTVISPDPNLRITEVAIPVLMARVLTYPERVSYYNIEKLRQCIRNGPHKHPGANF 409
Query: 1083 IRYPDGSLMHLRYSSRKRAADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMSHRARIM 1262
+ PDG+ +HL+Y R+ AA +LKYG IVERHLEDGD+VLFNRQPSLHRMSIMSHRARIM
Sbjct: 410 VTQPDGTKLHLKYCDRRIAARDLKYGCIVERHLEDGDIVLFNRQPSLHRMSIMSHRARIM 469
Query: 1263 PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 1442
PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS
Sbjct: 470 PWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEILVAS 529
Query: 1443 TQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIELWTGKQLFSVL 1622
TQDFLTSSFLITRKD FYDR+ F+L+CSY+GD M+ +DLPTPA+IKP+ELWTGKQLFSVL
Sbjct: 530 TQDFLTSSFLITRKDNFYDRSYFTLLCSYLGDAMENIDLPTPAIIKPLELWTGKQLFSVL 589
Query: 1623 VRPNARMRVFLNLTVLEKNYSKS-----------GESLCPNDGFVYFRNSELMSGQLGKA 1769
VRPNA +V+LNLTV EK Y K E++CPNDG+VYFRNSEL+SGQ+GK
Sbjct: 590 VRPNACTKVYLNLTVEEKIYMKRRERDKNAVSVLEETMCPNDGYVYFRNSELLSGQVGKK 649
Query: 1770 TLGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGELLNQQK 1949
TLGNGNKDG+FSVL+RDYN+HAAA+CMNRLAK SAR+IGNHGFSIG+DDVQPGE LNQ+K
Sbjct: 650 TLGNGNKDGMFSVLVRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGESLNQKK 709
Query: 1950 KARIEEGYEACDELIQSYNKG--NLKLQPGCDAAQTLEAEITGVLNKIRETAAKVCMEEL 2123
K I++GY C +LI Y+KG +L PGC+ AQTLE ++ +LN++RE A + CM L
Sbjct: 710 KKTIDQGYTECHDLIAVYSKGAPGAELHPGCNRAQTLEVRVSAILNQLREKAGEHCMNTL 769
Query: 2124 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKMPAAK 2303
HWRNSPLIMSQCGSKGSPINISQM+ CVGQQSVGGRRAP+GFIDR+LPHFP SK PAAK
Sbjct: 770 HWRNSPLIMSQCGSKGSPINISQMVVCVGQQSVGGRRAPDGFIDRTLPHFPIHSKTPAAK 829
Query: 2304 GFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVR 2483
GFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTA+TGYMSRRL+K LEDLS+ YD TVR
Sbjct: 830 GFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTAETGYMSRRLMKGLEDLSVFYDQTVR 889
Query: 2484 NASGGVVQFLYGDDGMDPARMEGKSGVPLNLERLYLKVKATCPARTQASLSPSEVLRIVE 2663
NAS G+VQF+YGDDGMDP +MEGK G PLNL++L++KVKATCP R LSP +++++
Sbjct: 890 NASSGIVQFVYGDDGMDPVKMEGKGGSPLNLDQLFMKVKATCPQRGHDMLSPEAIMQMLN 949
Query: 2664 EKLERHDASPAGGCSDAFKKLLLDFVHKRIDMFSSTKRALQLDEKYAGDSNVNFLENIAA 2843
+KL D S +GGCSD FK+LL F RI M ST+R L LDE + G + + E IAA
Sbjct: 950 DKLSEQDMS-SGGCSDKFKELLTKFFEDRIKMLRSTRRTLHLDEDHVGMKDSSIEERIAA 1008
Query: 2844 NISGITSQQLQVFLETCITRYDSKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASM 3023
NISGI+++QLQVFL+TC++RY SK EPGTQMTLKTFHFAGVASM
Sbjct: 1009 NISGISAKQLQVFLDTCLSRYHSKIIEAGASIGAIGAQSIGEPGTQMTLKTFHFAGVASM 1068
Query: 3024 NVTLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKGCVEKTVLGEVAKSMKIVM 3203
NVTLGVPRIKEIIN AKNISTPIITA L D+ A VK VEK VLGEVA +KIV+
Sbjct: 1069 NVTLGVPRIKEIINAAKNISTPIITAELLSGQDMSFAVKVKRYVEKVVLGEVAAVIKIVL 1128
Query: 3204 TSRQASIVVTLDMERIHA-SQLRISAYSVKQSILQHPRTKLKTQHIEVLDDKKLRILPPE 3380
S Q ++VV LDM+RI A + IS+ SV+QSI++HP+ KLK++H+ V+D KLRI P
Sbjct: 1129 KSSQPNLVVKLDMQRIEAQGYMGISSDSVQQSIIRHPKIKLKSEHVRVIDGAKLRIYPTG 1188
Query: 3381 ADRSKLQFELHSLRATLPKVIVKGISTVERAVIN------KDKGKYNLLVEGTNLQAVMG 3542
D+SKLQ ELH+L++ LPKVIVKGI TVERAV+N K +YNLLVEGTNL V+G
Sbjct: 1189 TDKSKLQLELHTLKSMLPKVIVKGIPTVERAVVNPVKRPDKTLDRYNLLVEGTNLLKVLG 1248
Query: 3543 TPGVDGRKTTSNHIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLADLMTYK 3722
TPGVD +KT SNHI+EV +TLGIEAAR+ II EI+YT S+ M ID RHMMLLADLMTYK
Sbjct: 1249 TPGVDAKKTKSNHIMEVNQTLGIEAARRSIIDEIRYTFESNNMIIDQRHMMLLADLMTYK 1308
Query: 3723 GEVLGITRFGIQKMKESVLMLASFEKTADHLFNASFNGRDDKIEGVSECIIMGIPMQIGT 3902
GEVLGITRFGI KMK SVLMLASFEKT +HLFNAS++GR+D+IEGVSECIIMGIPM +G+
Sbjct: 1309 GEVLGITRFGIVKMKSSVLMLASFEKTLEHLFNASYSGREDEIEGVSECIIMGIPMTLGS 1368
Query: 3903 GILKVRQSVKQVVKLNYGLDPIIS 3974
GILKVRQ + + + NY D IIS
Sbjct: 1369 GILKVRQRLDHLPEFNYQPDAIIS 1392
>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
polymerase III largest subunit, putative [Ricinus
communis]
Length = 1383
Score = 1810 bits (4689), Expect = 0.0
Identities = 943/1362 (69%), Positives = 1084/1362 (79%), Gaps = 38/1362 (2%)
Frame = +3
Query: 3 RKPIENALLDPHMGPANK-SGICATCHGNFTSCPGHFGYLNLVLPVYNVGYFSSVIDILK 179
RKPI+ LLDP +GPA K S C TC +F CPGHFGYLNLVLPV+NVGY S+++DILK
Sbjct: 25 RKPIQAGLLDPRLGPATKQSSACETCGADFHECPGHFGYLNLVLPVFNVGYMSNILDILK 84
Query: 180 SICKSCARILLSEKERRDYLKKMRNPRLEALQKSALAKQIVKKCKPT-------CHRCRY 338
ICKSC+RIL EK + LKKMRNPR+E L+KS L K+IVKKC C RC
Sbjct: 85 CICKSCSRILYDEKLCKADLKKMRNPRIEHLRKSELVKKIVKKCSSMTSNKAVKCTRCGD 144
Query: 339 VNGMVKKAGTMLGIVHDRSKIVDGTSEECRSAISHKKESKASFHVV-HVLNPVRVLALFK 515
+NGMVKKAG++L I+HDR+K+VDG EECRSAI+H KES+A + ++L PV+VL+LFK
Sbjct: 145 MNGMVKKAGSVLSIIHDRAKLVDGYLEECRSAIAHTKESRAPISLATYILTPVKVLSLFK 204
Query: 516 RMLDEDCELLYLRDRPEKLLITDIAVPPIPIRPSVFTDGGARSNENDITARLSTIMRANA 695
R+ +EDCE+L L DRPEKL+IT+IAVPPI IRPSVFTDG +SNENDIT RL I++ANA
Sbjct: 205 RIPEEDCEVLGLYDRPEKLIITNIAVPPISIRPSVFTDG-LQSNENDITERLKQIIQANA 263
Query: 696 SLRQEL-QCTGSMSKCLADWELLQIEVAQYINSDVRGIPLSMQSSTPYRGFIQRLKGKQG 872
SLR EL + S++K L W+ LQ VA Y+NSDVR +P +++ P GF+QRLKGKQG
Sbjct: 264 SLRMELLEGRMSVNKYLDSWDGLQAAVALYMNSDVR-VPNNVEVGKPLSGFVQRLKGKQG 322
Query: 873 RFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQVLTYPERVSHHNIEKLRQCVRN 1052
RFRGNLSGKRVE+TGRTVISPDPNLKITEVAIPI MA++L+YPERVSHHNIEKLRQ V N
Sbjct: 323 RFRGNLSGKRVEFTGRTVISPDPNLKITEVAIPIHMARILSYPERVSHHNIEKLRQLVSN 382
Query: 1053 GPQKYPGANFIRYPDGSLMHLRYSSRKRAADELKYGYIVERHLEDGDVVLFNRQPSLHRM 1232
GPQKYPGA+ +RYPDGS L S RK A+EL +G IV+RHLEDGDVVLFNRQPSLHRM
Sbjct: 383 GPQKYPGASTVRYPDGSSKRLIGSYRKTIAEELTFGCIVDRHLEDGDVVLFNRQPSLHRM 442
Query: 1233 SIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGV-QNNLC 1409
SIM HRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL+LMGV QNNLC
Sbjct: 443 SIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALLLMGVSQNNLC 502
Query: 1410 TPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIE 1589
TPKNGEILVASTQDFLTSSFLITR+DTFYDRAAFSLMCSYM DGMD +DLPTPA++KPIE
Sbjct: 503 TPKNGEILVASTQDFLTSSFLITRRDTFYDRAAFSLMCSYMNDGMDLIDLPTPAILKPIE 562
Query: 1590 LWTGKQLFSVLVRPNARMRVFLNLTVLEKNYSK-------SGESLCPNDGFVYFRNSELM 1748
LWTGKQLFSVL+RPNA +RV++NL V EK YSK E++CPNDGFVY RNSEL+
Sbjct: 563 LWTGKQLFSVLLRPNANVRVYVNLIVREKIYSKPKKGDKREKETMCPNDGFVYIRNSELI 622
Query: 1749 SGQLGKATLGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLS--ARWIGNHGFSIGIDDVQ 1922
SGQLGKATLGNGNKDGL+S+LLRDYN HAAA CMNRLAKL ARWIGNHGFSIGIDDVQ
Sbjct: 623 SGQLGKATLGNGNKDGLYSILLRDYNPHAAATCMNRLAKLRQVARWIGNHGFSIGIDDVQ 682
Query: 1923 PGELLNQQKKARIEEGYEACDELIQSYNKGNLKLQPGCDAAQTLEAEITGVLNKIRETAA 2102
PG+ L K I GY+ CD+LI+ YN+G L L+PGCDA QTLE+EIT LNK+RE A
Sbjct: 683 PGKKLIDGKGKTISNGYQQCDKLIEQYNEGKLLLKPGCDATQTLESEITEKLNKLREEAG 742
Query: 2103 KVCMEELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRK 2282
VCM+ELHWRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGRRAP+GFIDRSLPHFPRK
Sbjct: 743 DVCMKELHWRNSPLIMSQCGSKGSVINISQMVACVGQQSVGGRRAPDGFIDRSLPHFPRK 802
Query: 2283 SKMPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSI 2462
SK PAAKGFVANSFY+GL ATEFFFHTM GREGLVDTAVKTADTGYMSRRLIK LEDLSI
Sbjct: 803 SKTPAAKGFVANSFYSGLMATEFFFHTMAGREGLVDTAVKTADTGYMSRRLIKGLEDLSI 862
Query: 2463 HYDDTVRNASGGVVQFLYGDDGMDPARMEGKSGVPLNLERLYLKVKATCPARTQASLSPS 2642
YD+TVRNASG +VQFLYGDDG+DPA MEGK GVPLNL+RL+ KVKATCP R + LSP
Sbjct: 863 QYDNTVRNASGCIVQFLYGDDGLDPASMEGKGGVPLNLDRLFSKVKATCPVREEDYLSPL 922
Query: 2643 EVLRIVEEKLERHDASPAGGCSDAFKKLLLDFVHKRIDMFSSTKRALQLDEKYAGDS--- 2813
++ +VE L +HD + G CS+AFKK L F+ S + E ++
Sbjct: 923 DISDVVENLLLKHDMALGGICSEAFKKSLTSFLGSHAKRLESMMKLADGVEDPTSENIQT 982
Query: 2814 -----NVNFLENIAANISGITSQQLQVFLETCITRYDSKRXXXXXXXXXXXXXXXXEPGT 2978
N +E +A I G++ +Q++VF++TCI RY KR EPGT
Sbjct: 983 GGIRGNSKIIERLAHKIFGVSERQIEVFVKTCINRYLWKRVEPGTAIGAIGAQSIGEPGT 1042
Query: 2979 QMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKGCVE 3158
QMTLKTFHFAGVASMN+T GVPRIKEIINGAK ISTPIITA LE + +V +ARI KG ++
Sbjct: 1043 QMTLKTFHFAGVASMNITQGVPRIKEIINGAKKISTPIITAELEQNTNVTAARIAKGRIQ 1102
Query: 3159 KTVLGEVAKSMKIVMTSRQASIVVTLDMERIHASQLRISAYSVKQSILQHPRTKLKTQHI 3338
KTVLG+VAKS+KIVMTSR AS+V+TLDM+ I +QL + A VK++IL+ PR KLK QHI
Sbjct: 1103 KTVLGQVAKSIKIVMTSRSASVVITLDMKTIQNAQLSLDANIVKEAILRTPRIKLKPQHI 1162
Query: 3339 EVLDDKKLRILPPEADRSKLQFELHSLRATLPKVIVKGISTVERAVI--NKDKGK----- 3497
+VLD +KL ++ P DR ++ FELH+L+ LP +IV+GI TVERAVI K GK
Sbjct: 1163 KVLDTRKLEVI-PLGDRERVHFELHNLKNLLPSIIVQGIKTVERAVIAQKKHDGKANDQE 1221
Query: 3498 ---YNLLVEGTNLQAVMGTPGVDGRKTTSNHIIEVKETLGIEAARKCIISEIQYTMASHG 3668
YN+LVEG L VMGT GVDG KTTSNH++EV++ LGIEAARKCII EI TM HG
Sbjct: 1222 LPTYNMLVEGMGLDLVMGTEGVDGCKTTSNHVMEVQKFLGIEAARKCIIDEINQTMEHHG 1281
Query: 3669 MSIDIRHMMLLADLMTYKGEVLGITRFGIQKMKESVLMLASFEKTADHLFNASFNGRDDK 3848
MSIDIRHMMLL DLMT+KGEVLGITRFGIQKM +SVLMLASFEKTADHL++A+ GRDDK
Sbjct: 1282 MSIDIRHMMLLGDLMTFKGEVLGITRFGIQKMDKSVLMLASFEKTADHLYHAAVFGRDDK 1341
Query: 3849 IEGVSECIIMGIPMQIGTGILKVRQSVKQVVKLNYGLDPIIS 3974
IEGVSECIIMGIPMQIGTGILKV+Q V LNYG D IIS
Sbjct: 1342 IEGVSECIIMGIPMQIGTGILKVQQRVDPPPVLNYGSDSIIS 1383
>ref|XP_002300065.1| DNA-directed RNA polymerase family protein [Populus trichocarpa]
gi|222847323|gb|EEE84870.1| DNA-directed RNA polymerase
family protein [Populus trichocarpa]
Length = 1394
Score = 1798 bits (4658), Expect = 0.0
Identities = 928/1345 (68%), Positives = 1073/1345 (79%), Gaps = 38/1345 (2%)
Frame = +3
Query: 3 RKPIENALLDPHMGPANKSGICATCHGNFTSCPGHFGYLNLVLPVYNVGYFSSVIDILKS 182
+K I LLD MG NK G C TC G+FT CPGHFGYLNLVLPVYNVGY S+++DILK
Sbjct: 55 KKAIVGGLLDTRMGAPNKHGTCQTCGGSFTDCPGHFGYLNLVLPVYNVGYLSTILDILKC 114
Query: 183 ICKSCARILLSEKERRDYLKKMRNPRLEALQKSALAKQIVKKCKPT-------CHRCRYV 341
ICKSC+R+L+ EK R+ YLK+MRNPR E L+K+ L K+IVKKC C RC Y+
Sbjct: 115 ICKSCSRVLVDEKLRKSYLKRMRNPRTEPLKKNELMKEIVKKCSSMASSKAVKCLRCGYM 174
Query: 342 NGMVKKAGTMLGIVHDRSKIVDGTSEECRSAISHKKESKASFHVV-HVLNPVRVLALFKR 518
NGMVKKAG+++GI+HDRSK++DG EEC+SAI H +E++A + ++LNPVRVL+LF+R
Sbjct: 175 NGMVKKAGSVVGIIHDRSKLIDGYLEECKSAIGHTREARAPIGLATYILNPVRVLSLFQR 234
Query: 519 MLDEDCELLYLRDRPEKLLITDIAVPPIPIRPSVFTDGGARSNENDITARLSTIMRANAS 698
M++EDCELLYL+ RPEKL+IT IAVPPI IRPSVFT+G ++SNENDIT RL I++ NA
Sbjct: 235 MVEEDCELLYLQGRPEKLIITTIAVPPISIRPSVFTEG-SQSNENDITERLKQIIQFNAK 293
Query: 699 LRQEL---QCTGSMSKCLADWELLQIEVAQYINSDVRGIPLSMQSSTPYRGFIQRLKGKQ 869
LR EL + TG K L W+ LQ V YINSDVR IPL MQ P GF+QRL GKQ
Sbjct: 294 LRLELLEGRRTGI--KYLIGWDELQAVVTLYINSDVR-IPLDMQVGRPLSGFVQRLTGKQ 350
Query: 870 GRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQVLTYPERVSHHNIEKLRQCVR 1049
GRFR NL+GKRVE+TGRTVISPDPNLKITEVAIPI MA++LTYPERV+HHNIEKLRQCV
Sbjct: 351 GRFRQNLAGKRVEFTGRTVISPDPNLKITEVAIPIHMARILTYPERVTHHNIEKLRQCVN 410
Query: 1050 NGPQKYPGANFIRYPDGSLMHLRYSSRKRAADELKYGYIVERHLEDGDVVLFNRQPSLHR 1229
NG KYPGA + YPDGS L + RKR A+ELK G IV RHLEDGDVVLFNRQPSLHR
Sbjct: 411 NGSYKYPGARMVTYPDGSSKMLTGNYRKRIAEELKSGCIVHRHLEDGDVVLFNRQPSLHR 470
Query: 1230 MSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLC 1409
MSIM HRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA +LMGVQNNLC
Sbjct: 471 MSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEAFLLMGVQNNLC 530
Query: 1410 TPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIE 1589
TPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYM DGMD VDLPTP+++KPIE
Sbjct: 531 TPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMNDGMDLVDLPTPSVLKPIE 590
Query: 1590 LWTGKQLFSVLVRPNARMRVFLNLTVLEKNYS-------KSGESLCPNDGFVYFRNSELM 1748
LWTGKQLFSVL+RP+A +RV++NL + EKNYS K E++CPNDG+VYFRNSEL+
Sbjct: 591 LWTGKQLFSVLLRPHANVRVYVNLILKEKNYSRPNKEHKKERETMCPNDGYVYFRNSELI 650
Query: 1749 SGQLGKATLGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPG 1928
SGQLGKATLGNGNKDGL+S+LLRDYNA+AAA CMNRLAKLSARWIGNHGFSIGIDDVQPG
Sbjct: 651 SGQLGKATLGNGNKDGLYSILLRDYNAYAAATCMNRLAKLSARWIGNHGFSIGIDDVQPG 710
Query: 1929 ELLNQQKKARIEEGYEACDELIQSYNKGNLKLQPGCDAAQTLEAEITGVLNKIRETAAKV 2108
+ L +K I GY C++LI YN G L L+ GCDA QTLE EIT LNK+RE A V
Sbjct: 711 KKLIDEKGKTISNGYRHCNKLIADYNGGRLALKSGCDATQTLETEITERLNKLREEAGDV 770
Query: 2109 CMEELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSK 2288
CM+ELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGG RAP+GFIDRSLPHFPRKSK
Sbjct: 771 CMKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGSRAPDGFIDRSLPHFPRKSK 830
Query: 2289 MPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHY 2468
PAAKGFVANSFY+GL+ATEFFFHTMGGREGLVDTAVKTADTGYM+RRL K LEDL + Y
Sbjct: 831 TPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMARRLSKGLEDLCVQY 890
Query: 2469 DDTVRNASGGVVQFLYGDDGMDPARMEGKSGVPLNLERLYLKVKATCPARTQASLSPSEV 2648
D+TV++A GG+VQFLYGDDG+DPA MEGK+GVPLN +RL++KVKATC A LSPS++
Sbjct: 891 DNTVQDAGGGIVQFLYGDDGLDPAIMEGKAGVPLNFDRLFMKVKATCGAEEDEYLSPSDI 950
Query: 2649 LRIVEEKLERHDASPAGGCSDAFKKLLLDFV---HKRIDMFSSTKRALQLDEKYAGDSNV 2819
IV+ L +H+ + G CS++F+K L F+ KR++ +++ E + NV
Sbjct: 951 SNIVQSLLLKHNGTLDGICSESFRKSLSSFLGDQAKRLECLMKLVDGVEV-ENFENIKNV 1009
Query: 2820 NFL-------ENIAANISGITSQQLQVFLETCITRYDSKRXXXXXXXXXXXXXXXXEPGT 2978
L E IA +SGIT +QL+VFL+TC+ RY KR EPGT
Sbjct: 1010 EGLTGISKNTEKIAQKVSGITEKQLEVFLKTCLDRYVWKRIEPGTAIGAIGAQSIGEPGT 1069
Query: 2979 QMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKGCVE 3158
QMTLKTFHFAGVASMN+T GVPRIKEIINGAK ISTPIIT LE +++V +ARI+KG ++
Sbjct: 1070 QMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITVELEHNSNVNAARIIKGRIQ 1129
Query: 3159 KTVLGEVAKSMKIVMTSRQASIVVTLDMERIHASQLRISAYSVKQSILQHPRTKLKTQHI 3338
KTVLG+VAKS+KIVMTSR AS+ VTLDM+ I +QL + A V++ IL+ P+ K K Q I
Sbjct: 1130 KTVLGQVAKSIKIVMTSRSASVKVTLDMKTIREAQLSLDANIVRELILETPKIKRKLQRI 1189
Query: 3339 EVLDDKKLRILPPEADRSKLQFELHSLRATLPKVIVKGISTVERAVI--------NKDKG 3494
VL+D KL + P DR+KL FELHSL+ LP V+VKGI TVER VI D+G
Sbjct: 1190 NVLEDGKLEVF-PGGDRNKLHFELHSLKNMLPAVVVKGIKTVERVVIAQKKLDDAENDQG 1248
Query: 3495 --KYNLLVEGTNLQAVMGTPGVDGRKTTSNHIIEVKETLGIEAARKCIISEIQYTMASHG 3668
KYN+ VEG LQAVMGT GVDGRKT SNHIIEV+ETLGIEAARKCII EI+ TM SHG
Sbjct: 1249 GPKYNMFVEGMGLQAVMGTEGVDGRKTKSNHIIEVQETLGIEAARKCIIDEIKGTMESHG 1308
Query: 3669 MSIDIRHMMLLADLMTYKGEVLGITRFGIQKMKESVLMLASFEKTADHLFNASFNGRDDK 3848
MSIDIRHMMLLAD+MT +G VLGITRFGIQKM +SVLMLASFEKT+DHLFNAS G+DDK
Sbjct: 1309 MSIDIRHMMLLADVMTSRGVVLGITRFGIQKMDKSVLMLASFEKTSDHLFNASVKGKDDK 1368
Query: 3849 IEGVSECIIMGIPMQIGTGILKVRQ 3923
IEGVSECIIMGIP+ IGTG+LK++Q
Sbjct: 1369 IEGVSECIIMGIPVAIGTGVLKIQQ 1393
>ref|XP_006424701.1| hypothetical protein CICLE_v10027681mg [Citrus clementina]
gi|557526635|gb|ESR37941.1| hypothetical protein
CICLE_v10027681mg [Citrus clementina]
Length = 1397
Score = 1792 bits (4641), Expect = 0.0
Identities = 937/1370 (68%), Positives = 1061/1370 (77%), Gaps = 46/1370 (3%)
Frame = +3
Query: 3 RKPIENALLDPHM---------------GPANKSGICATCHGNFTSCPGHFGYLNLVLPV 137
R PIE LLDP M GPANKS CATCHG F++CPGH+GYL L LPV
Sbjct: 59 RVPIEGGLLDPRMEKIIFLQRLFFHGFQGPANKSCTCATCHGGFSNCPGHYGYLTLALPV 118
Query: 138 YNVGYFSSVIDILKSICKSCARILLSEKERRDYLKKMRNPRLEALQKSALAKQIVKKCKP 317
YNVGY S+++DILK ICK C+R+LL EK +DYLKKMRNP++EAL+K+ L K IVKKC
Sbjct: 119 YNVGYLSTILDILKCICKYCSRLLLEEKLCKDYLKKMRNPKMEALRKTDLMKSIVKKCST 178
Query: 318 T------CHRCRYVNGMVKKAGTMLGIVHDRSKIVDGTSEECRSAISHKKESKASFHVV- 476
C RC Y+NGMVKKA +LGI+HDRSK+ + +E SAI+H KESKA+ +V
Sbjct: 179 MASKAVKCPRCGYINGMVKKAVAVLGIIHDRSKVTESL-QEFASAITHTKESKAAVNVAT 237
Query: 477 HVLNPVRVLALFKRMLDEDCELLYLRDRPEKLLITDIAVPPIPIRPSVFTDGGARSNEND 656
++LNPV VL LFKRM D DCE+LYL +RPEKL+IT+IAVPPI IRPSV DG ++SNEND
Sbjct: 238 YILNPVNVLFLFKRMTDTDCEVLYLSERPEKLIITNIAVPPIAIRPSVIMDG-SQSNEND 296
Query: 657 ITARLSTIMRANASLRQELQCTGSMSKCLADWELLQIEVAQYINSDVRGIPLSMQSSTPY 836
IT RL I++ NASL+QEL S K LA WE LQ+EVAQYINSDVRG+P SMQ + P
Sbjct: 297 ITERLKRIIQTNASLQQELVEANSAFKSLAGWETLQVEVAQYINSDVRGVPFSMQVARPL 356
Query: 837 RGFIQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQVLTYPERVSH 1016
GF+QRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPI MA++LTYPERVS
Sbjct: 357 SGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPIRMARILTYPERVSD 416
Query: 1017 HNIEKLRQCVRNGPQKYPGANFIRYPDGSLMHLRYSSRKRAADELKYGYIVERHLEDGDV 1196
HNIEKLRQC++NGP KYPGA IRYPDG+ L R + A ELK G IV+RHLEDGDV
Sbjct: 417 HNIEKLRQCIQNGPDKYPGARMIRYPDGTARVLYGKFRNQLAVELKSGCIVDRHLEDGDV 476
Query: 1197 VLFNRQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA 1376
VLFNRQPSLHRMSIM HRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEA
Sbjct: 477 VLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEA 536
Query: 1377 LMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPVD 1556
L+LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMC YMGDGMD VD
Sbjct: 537 LLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCCYMGDGMDRVD 596
Query: 1557 LPTPALIKPIELWTGKQLFSVLVRPNARMRVFLNLTVLEKNYSKS-----------GESL 1703
LPTPA++KP+ELWTGKQLFSVL+RP+A MRV++NLTV EK YS E++
Sbjct: 597 LPTPAILKPVELWTGKQLFSVLIRPHANMRVYVNLTVKEKTYSNKLIRTEGDEEIRIETM 656
Query: 1704 CPNDGFVYFRNSELMSGQLGKATLGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWI 1883
CPNDGFVYFRNSEL+SGQLGKATLG CMNRLAKLSARWI
Sbjct: 657 CPNDGFVYFRNSELISGQLGKATLG----------------------CMNRLAKLSARWI 694
Query: 1884 GNHGFSIGIDDVQPGELLNQQKKARIEEGYEACDELIQSYNKGNLKLQPGCDAAQTLEAE 2063
GNHGFSIGIDDVQP + L+ +K I E YE C+ I+ YN+G L+L+PGCDAAQTLEA
Sbjct: 695 GNHGFSIGIDDVQPKKELSDKKGKLISENYEVCNVKIKEYNEGKLQLKPGCDAAQTLEAV 754
Query: 2064 ITGVLNKIRETAAKVCMEELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPN 2243
IT +LN+IRE A K CM L WRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAPN
Sbjct: 755 ITDILNRIREDAGKACMGSLPWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPN 814
Query: 2244 GFIDRSLPHFPRKSKMPAAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYM 2423
GFIDRSLPHFPRK+K PAAKGFVANSFY+GL+ATEFFFHTMGGREGLVDTAVKTADTGYM
Sbjct: 815 GFIDRSLPHFPRKAKEPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYM 874
Query: 2424 SRRLIKALEDLSIHYDDTVRNASGGVVQFLYGDDGMDPARMEGKSGVPLNLERLYLKVKA 2603
SRRLIKALEDLSI YD++VRNA G +VQFLYGDDGMDPA MEGKSG PLN +RL +KVKA
Sbjct: 875 SRRLIKALEDLSIQYDNSVRNAGGCIVQFLYGDDGMDPANMEGKSGEPLNFDRLLMKVKA 934
Query: 2604 TCPARTQASLSPSEVLRIVEEKLERHDASPAGGCSDAFKKLLLDFVHKRIDMFSSTKRAL 2783
TCP Q LSP +V IVE++L + CS+AF L F + D + +
Sbjct: 935 TCPPAGQRYLSPQQVSEIVEKQLAAYGKE---SCSEAFLNSLRKFFEGQQDKLD---KKI 988
Query: 2784 QLDEKYAGDSNVNFLENIAANISGITSQQLQVFLETCITRYDSKRXXXXXXXXXXXXXXX 2963
+ E D LE + SGIT +QL+VF++TC +RY KR
Sbjct: 989 KFVEDIGWDDKSQILEEVTHKTSGITEKQLEVFIQTCFSRYHVKRVEAGTAIGAIGAQSI 1048
Query: 2964 XEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIV 3143
EPGTQMTLKTFHFAGVASMN+T GVPRIKEIINGAK ISTPIITA LEC+++ +AR+V
Sbjct: 1049 GEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITAELECNDNENAARVV 1108
Query: 3144 KGCVEKTVLGEVAKSMKIVMTSRQASIVVTLDMERIHASQLRISAYSVKQSILQHPRTKL 3323
KG +EKT+LG+VAKS+KIVMTSR ASIV+ LDME I + L I+A VK+SI+Q P+ KL
Sbjct: 1109 KGRIEKTLLGQVAKSIKIVMTSRLASIVIALDMETIQDAHLCINADIVKESIVQTPKIKL 1168
Query: 3324 KTQHIEVLDDKKLRILPPEADRSKLQFELHSLRATLPKVIVKGISTVERAVI-------- 3479
K QHI+VLD +KL I PP D+SK+ FEL+SL+ LP VIVKGI TVER VI
Sbjct: 1169 KQQHIKVLDFRKLEIFPP-VDKSKIHFELYSLKNVLPMVIVKGIKTVERVVIAEKEKEKR 1227
Query: 3480 ----NKDKGKYNLLVEGTNLQAVMGTPGVDGRKTTSNHIIEVKETLGIEAARKCIISEIQ 3647
N +K KY LLVEGT LQAVMG G+DG KT SNHI EV++TLGIEAAR CII EI
Sbjct: 1228 KVKENGEKKKYRLLVEGTGLQAVMGAEGIDGCKTKSNHIFEVQQTLGIEAARICIIDEIN 1287
Query: 3648 YTMASHGMSIDIRHMMLLADLMTYKGEVLGITRFGIQKMKESVLMLASFEKTADHLFNAS 3827
TM +HGMSID RHMMLLADLMT++GEVLGITRFGIQKM +SVLMLASFEKTADHLFNAS
Sbjct: 1288 ETMKAHGMSIDKRHMMLLADLMTFRGEVLGITRFGIQKMDKSVLMLASFEKTADHLFNAS 1347
Query: 3828 FNGRDDKIEGVSECIIMGIPMQIGTGILKVRQSVKQVVKLNYGL-DPIIS 3974
NGRDD+IEGVSECIIMGIPM +GTGILK+RQ L YG DPI+S
Sbjct: 1348 VNGRDDRIEGVSECIIMGIPMPLGTGILKIRQRDAVPPMLKYGAPDPIMS 1397
>gb|EYU39043.1| hypothetical protein MIMGU_mgv1a000232mg [Mimulus guttatus]
Length = 1394
Score = 1771 bits (4587), Expect = 0.0
Identities = 908/1359 (66%), Positives = 1073/1359 (78%), Gaps = 35/1359 (2%)
Frame = +3
Query: 3 RKPIENALLDPHMGPANKSGICATCHGNFTSCPGHFGYLNLVLPVYNVGYFSSVIDILKS 182
RKPI+N LLD MGPANKS +C TC G F CPGH+GYL L LPVYNVG+F ++IDILK
Sbjct: 54 RKPIDNGLLDQRMGPANKSILCKTCGGKFVDCPGHYGYLPLALPVYNVGFFLTIIDILKC 113
Query: 183 ICKSCARILLSEKERRDYLKKMRNPRLEALQKSALAKQIVKKCKPT--------CHRCRY 338
ICK+C+R+LL++K+ + +LK+MRNP+ E L+K + K++VKKC C RC Y
Sbjct: 114 ICKNCSRVLLADKDHQVFLKQMRNPKCETLKKIEIQKRVVKKCNSLAGSKRAVKCSRCGY 173
Query: 339 VNGMVKKAGTMLGIVHDRSKIVDGTSEECRSAISHKKESKASFHVVHVLNPVRVLALFKR 518
+NGMVKKA L I HDR+K+VD +E RSA++H K+ K + V+ ++P L +
Sbjct: 174 INGMVKKAKEPLKIQHDRAKVVDNCLDERRSALAHTKDIKGNPVVISTIDPKTAYHLLEN 233
Query: 519 MLDEDCELLYLRDRPEKLLITDIAVPPIPIRPSVFTDGGARSNENDITARLSTIMRANAS 698
MLDEDCELLYL DRPEKL++T+I VPPI IRPSVF+ A SNENDIT+RL I++ NA+
Sbjct: 234 MLDEDCELLYLHDRPEKLIVTNILVPPIAIRPSVFSTR-AMSNENDITSRLKQIIQINAA 292
Query: 699 LRQELQCTGSMSKCLAD-WELLQIEVAQYINSDVRGIPLSMQSST-PYRGFIQRLKGKQG 872
+ QE+ S S+ L + W+ LQ+EVAQYINSDVR +PL +T P GF+QRLKGKQG
Sbjct: 293 VLQEMSDQSSQSQSLTNNWDSLQVEVAQYINSDVR-VPLQYSENTKPLSGFVQRLKGKQG 351
Query: 873 RFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQVLTYPERVSHHNIEKLRQCVRN 1052
RFRGNLSGKRVE+TGRTVISPDPNLKI EVA+PILMAQ+L+YPERVSHHNIE+LRQCVRN
Sbjct: 352 RFRGNLSGKRVEFTGRTVISPDPNLKINEVAVPILMAQILSYPERVSHHNIERLRQCVRN 411
Query: 1053 GPQKYPGANFIRYPDGSLMHLRYSSRKRAADELKYGYIVERHLEDGDVVLFNRQPSLHRM 1232
GP KYPGA FI++PDG+ + L R RAAD+LKYGYIV RHL+DGD++LFNRQPSLHRM
Sbjct: 412 GPTKYPGAKFIKHPDGTEISLTGKIRHRAADDLKYGYIVCRHLQDGDIILFNRQPSLHRM 471
Query: 1233 SIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCT 1412
SIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEALMLMGVQNNLCT
Sbjct: 472 SIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALMLMGVQNNLCT 531
Query: 1413 PKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIEL 1592
PKNGEILVASTQDFLTSS+LITRKDTFYDRA+FSL+CSYMGD MDP+DLPTPAL+KP+EL
Sbjct: 532 PKNGEILVASTQDFLTSSYLITRKDTFYDRASFSLICSYMGDAMDPIDLPTPALVKPVEL 591
Query: 1593 WTGKQLFSVLVRPNARMRVFLNLTVLEKNYSKSGESLCPNDGFVYFRNSELMSGQLGKAT 1772
WTGKQLFS+L+RP+A+MRV++NLTV EKNY KSGE++CP DGFVY RNSEL+SGQLGKAT
Sbjct: 592 WTGKQLFSILLRPHAKMRVYVNLTVAEKNYGKSGETMCPKDGFVYIRNSELISGQLGKAT 651
Query: 1773 LGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGELLNQQKK 1952
LGNG+KDGL+SVLLRDY+AHAAA CMNRLAKLSARWIGNHGFSIGI+DVQPG +LN++KK
Sbjct: 652 LGNGSKDGLYSVLLRDYSAHAAATCMNRLAKLSARWIGNHGFSIGINDVQPGIVLNKEKK 711
Query: 1953 ARIEEGYEACDELIQSYNKGNLKLQPGCDAAQTLEAEITGVLNKIRETAAKVCMEELHWR 2132
I++GY C + I SY G+L L PGC+ A+TLEA ITG LN IRE A VCM LHWR
Sbjct: 712 VTIDKGYGQCIDYIGSYKSGSLDLLPGCNNAETLEANITGTLNNIRERTANVCMNNLHWR 771
Query: 2133 NSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKMPAAKGFV 2312
NSPLIMSQC ACVGQQSVGGRRAPNGF+DR+LPHF R++K P AKGFV
Sbjct: 772 NSPLIMSQCDG-----------ACVGQQSVGGRRAPNGFLDRTLPHFEREAKDPDAKGFV 820
Query: 2313 ANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNAS 2492
NSFYTGL+ATEFFFHTMGGREGLVDTAVKTADTGYMSRRL+KALEDLS+HYD TVRNAS
Sbjct: 821 QNSFYTGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSVHYDGTVRNAS 880
Query: 2493 GGVVQFLYGDDGMDPARMEGKSGVPLNLERLYLKVKATCPARTQASLSPSEVLR----IV 2660
+VQF+YG D MDP +ME KSG+PLN ERL++K KATCPA Q SLS E+ + I+
Sbjct: 881 VCIVQFVYGGDAMDPGQMEEKSGLPLNFERLFMKAKATCPAVEQKSLSIEEIDKTMDEII 940
Query: 2661 EEKLERHDASPAGGCSDAFK-------------KLLLDFVHKRIDMFSSTKRALQLDEKY 2801
++L A+P G S AF L F+ K+ + ++ L+L+ K
Sbjct: 941 GDRLSESTATPEGESSQAFSASSNKEGGMETFDNSLRKFIQKK---YPNSDLMLKLNGKE 997
Query: 2802 AGDSNVNFLENIAANISGITSQQLQVFLETCITRYDSKRXXXXXXXXXXXXXXXXEPGTQ 2981
D + +LE IA+NI G+T QQL VFLETCI+RY K+ EPGTQ
Sbjct: 998 HSDEDKGYLEKIASNICGVTRQQLMVFLETCISRYRLKKIEGGTAIGAIGAHSIGEPGTQ 1057
Query: 2982 MTLKTFHFAGVASMNVTLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKGCVEK 3161
MTLKTFHFAGVASMNVTLGVPRIKEIIN AK I+TPII+ L+ DN+ A+IVKG +EK
Sbjct: 1058 MTLKTFHFAGVASMNVTLGVPRIKEIINAAKKINTPIISTALQSDNNEIIAKIVKGRIEK 1117
Query: 3162 TVLGEVAKSMKIVMTSRQASIVVTLDMERIHASQLRISAYSVKQSILQHPRTKLKTQHIE 3341
T+L +VAKS+K SR SIV+TLDM +I + L + AY+VK+SIL+ R KLK Q ++
Sbjct: 1118 TLLEQVAKSIKTSQASRSTSIVITLDMTKIQGAHLSVDAYTVKESILKTKRMKLKEQQVK 1177
Query: 3342 VLDDKKLRILPPEADRSKLQFELHSLRATLPKVIVKGISTVERAVI-----NKDKG---K 3497
VLD +KL I+ +AD++KLQFELH L+ + KV+VKGI TVERA+I KD K
Sbjct: 1178 VLDHRKLEIV-MQADKTKLQFELHGLKNKISKVVVKGIDTVERAIILNEAKEKDPSANKK 1236
Query: 3498 YNLLVEGTNLQAVMGTPGVDGRKTTSNHIIEVKETLGIEAARKCIISEIQYTMASHGMSI 3677
LLVEGT L +VMG GV+GRKTTSNHIIEV+ LGIEAARK II EIQYTM+SHGM+I
Sbjct: 1237 MKLLVEGTGLLSVMGIEGVEGRKTTSNHIIEVQHILGIEAARKKIIDEIQYTMSSHGMTI 1296
Query: 3678 DIRHMMLLADLMTYKGEVLGITRFGIQKMKESVLMLASFEKTADHLFNASFNGRDDKIEG 3857
DIRHMMLLADLMT KGEVLGITR+G+QKMK+SVLMLASFE+T+DHLFNAS NGR DKIEG
Sbjct: 1297 DIRHMMLLADLMTSKGEVLGITRYGVQKMKDSVLMLASFERTSDHLFNASVNGRVDKIEG 1356
Query: 3858 VSECIIMGIPMQIGTGILKVRQSVKQVVKLNYGLDPIIS 3974
VSECIIMGIP+QIGTG+LKVRQ+VK ++L YG DPIIS
Sbjct: 1357 VSECIIMGIPVQIGTGMLKVRQNVKP-IELTYGPDPIIS 1394
>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
max]
Length = 1391
Score = 1751 bits (4535), Expect = 0.0
Identities = 897/1341 (66%), Positives = 1054/1341 (78%), Gaps = 17/1341 (1%)
Frame = +3
Query: 3 RKPIENALLDPHMGPANKSGICATCHGNFTSCPGHFGYLNLVLPVYNVGYFSSVIDILKS 182
+KPI LLDP MGPANKS +CATC GNF CPGH+GYLNL LPV+NVGY S++++ILK
Sbjct: 56 KKPIHGGLLDPRMGPANKSLVCATCDGNFHDCPGHYGYLNLALPVFNVGYLSTIVEILKC 115
Query: 183 ICKSCARILLSEKERRDYLKKMRNPRLEALQKSALAK-QIVKKCKPT--CHRCRYVNGMV 353
ICK CARILL E R+ +LKKMR+ + L K K +++K C C RC Y+NG V
Sbjct: 116 ICKGCARILLDEDTRKKHLKKMRSSKKSELDKIDFVKVRVIKDCSKVVNCPRCGYINGSV 175
Query: 354 KKAGTMLGIVHDRSKIVDGTSEECRSAISHKKESKASFHVVH-VLNPVRVLALFKRMLDE 530
KK L I+HD SK + EE SA+S K+S+A+ +V + +LNP +VL+LFKRMLDE
Sbjct: 176 KKLPASLTIIHDCSKCRNYIVEELDSALSRMKDSRATTNVSNRILNPFQVLSLFKRMLDE 235
Query: 531 DCELLYLRDRPEKLLITDIAVPPIPIRPSVFTDGGARSNENDITARLSTIMRANASLRQE 710
DCELLY+ +RPEKL++T++ VPPI IRPSV D SNENDIT RL I++ANA LRQE
Sbjct: 236 DCELLYVAERPEKLIMTNVVVPPIAIRPSVVMDESL-SNENDITERLKNIIQANAVLRQE 294
Query: 711 LQCTGSMSKCLADWELLQIEVAQYINSDVRGIPLSMQSSTPYRGFIQRLKGKQGRFRGNL 890
LQ + SK L W++LQ EVAQ+INSDVRGIP MQ + GF+QRLKGK GRFRGNL
Sbjct: 295 LQESTFSSKFLDGWDILQNEVAQFINSDVRGIPFYMQPTKQLAGFVQRLKGKHGRFRGNL 354
Query: 891 SGKRVEYTGRTVISPDPNLKITEVAIPILMAQVLTYPERVSHHNIEKLRQCVRNGPQKYP 1070
SGKRVEYTGRTVISPDPNLKI+EVAIPI MA++LTYPERV+HHNIEKLRQCVRNGP KYP
Sbjct: 355 SGKRVEYTGRTVISPDPNLKISEVAIPIHMARILTYPERVTHHNIEKLRQCVRNGPDKYP 414
Query: 1071 GANFIRYPDGSLMHLRYSSRKRAADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMSHR 1250
GA +R G L+ RKRAADEL+ G IV+RHLEDGD+VLFNRQPSLHRMSIM HR
Sbjct: 415 GARMLRRDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMCHR 474
Query: 1251 ARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEI 1430
ARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA++LMGV+NNLCTPKNGEI
Sbjct: 475 ARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVENNLCTPKNGEI 534
Query: 1431 LVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIELWTGKQL 1610
LVASTQDFLTSSFLITRKDTFYDR+ FSL+CSY+GDGMDP+DLPTPA++KP+ELW+GKQL
Sbjct: 535 LVASTQDFLTSSFLITRKDTFYDRSTFSLICSYIGDGMDPIDLPTPAIVKPVELWSGKQL 594
Query: 1611 FSVLVRPNARMRVFLNLTVLEKNYSK---------SGESLCPNDGFVYFRNSELMSGQLG 1763
FS+++RP+A MRV++NLTV E+NY++ ++LCPNDGFVYFRNSEL+SGQ+G
Sbjct: 595 FSIILRPHANMRVYVNLTVKERNYTEDKKIKDKKIEWKTLCPNDGFVYFRNSELISGQVG 654
Query: 1764 KATLGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGELLNQ 1943
K TLGNGNKDGLFSVLLRDY AHAAA+CMNRLAKLSARWIGNHGFSIGIDDVQP E+L
Sbjct: 655 KVTLGNGNKDGLFSVLLRDYRAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEILIN 714
Query: 1944 QKKARIEEGYEACDELIQSYNKGNLKLQPGCDAAQTLEAEITGVLNKIRETAAKVCMEEL 2123
+K I EGY CD+ I+++NKG L+L GCDAAQTLE ITGVLN +R+TA KVCM+ L
Sbjct: 715 KKDETISEGYRECDKHIEAFNKGKLELLAGCDAAQTLETRITGVLNGLRDTAGKVCMQTL 774
Query: 2124 HWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKMPAAK 2303
HWRNSPLIMSQCGSKGS INISQM+ACVGQQSVGGRR PNGFIDRSLPHFPRKSK PAAK
Sbjct: 775 HWRNSPLIMSQCGSKGSSINISQMVACVGQQSVGGRRTPNGFIDRSLPHFPRKSKTPAAK 834
Query: 2304 GFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVR 2483
GFVANSFY+GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSR+L+K+LEDL +HYD TVR
Sbjct: 835 GFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSLEDLFLHYDYTVR 894
Query: 2484 NASGGVVQFLYGDDGMDPARMEGKSGVPLNLERLYLKVKATCP-ARTQASLSPSEVLRIV 2660
NA G +VQF YGDDGMDPA MEGK+G PLN ERL+LK KA CP LS S+V ++V
Sbjct: 895 NAGGSIVQFCYGDDGMDPAGMEGKNGKPLNFERLFLKSKAICPNDEDDEILSSSDVSKVV 954
Query: 2661 EEKLERHDASPAGGCSDAFKKLLLDFVHKRIDMFSSTKRALQLDEKYAGDSNVNFLENIA 2840
EKL D S DFV + S K +L E+ D + L+
Sbjct: 955 HEKLSEFDMSRLAEKGVFEVGFSADFVE---SLQSFIKDNAKLTEEGFTDEHSQNLKKFG 1011
Query: 2841 ANISGITSQQLQVFLETCITRYDSKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVAS 3020
ISGIT +QL VFL C++RY SK+ EPGTQMTLKTFHFAGVAS
Sbjct: 1012 QRISGITRKQLDVFLNICLSRYHSKKMEAGAPVGATGAHSIGEPGTQMTLKTFHFAGVAS 1071
Query: 3021 MNVTLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKGCVEKTVLGEVAKSMKIV 3200
MNVTLGVPR+KEI+NG K ISTPIITA LE D++ +ARIVKG +EKT LG+VAKS+K+V
Sbjct: 1072 MNVTLGVPRVKEIMNGNKKISTPIITAILERDDNANTARIVKGRIEKTNLGQVAKSIKVV 1131
Query: 3201 MTSRQASIVVTLDMERIHASQLRISAYSVKQSILQHPRTKLKTQHIEVLDDKKLRILPPE 3380
MTSR AS+V+TLDM+RI + L I A VK+SIL+ +TKLK +HI++LD KKL ++P +
Sbjct: 1132 MTSRSASVVITLDMKRIQDAHLNIDANIVKESILRTKKTKLKPEHIKILDIKKLEVVPQD 1191
Query: 3381 ADRSKLQFELHSLRATLPKVIVKGISTVERAVINKD--KGKYNLLVEGTNLQAVMGTPGV 3554
DRSK+ F+LH L+ LP V+VKGI TV+R VI+KD K+ LLVEGT + VMG G+
Sbjct: 1192 VDRSKIHFQLHYLKNLLPTVVVKGIKTVDRVVISKDTKAEKFRLLVEGTGFREVMGVEGI 1251
Query: 3555 DGRKTTSNHIIEVKETLGIEAARKCIISEIQYTMA-SHGMSIDIRHMMLLADLMTYKGEV 3731
DGRKT SNHI EV++TLGIEAAR+ I+ EI+YTM +HGM+IDIRHMMLLAD+MT G +
Sbjct: 1252 DGRKTVSNHIHEVRDTLGIEAARESIVKEIKYTMVDTHGMNIDIRHMMLLADMMTATGHI 1311
Query: 3732 LGITRFGIQKMKESVLMLASFEKTADHLFNASFNGRDDKIEGVSECIIMGIPMQIGTGIL 3911
LGI RFGI KM +SVLMLASFE+TAD LF AS GRDD I GVSE IIMGIP+QIGTG++
Sbjct: 1312 LGINRFGISKMGKSVLMLASFERTADILFQASVRGRDDSIGGVSESIIMGIPIQIGTGMI 1371
Query: 3912 KVRQSVKQVVKLNYGLDPIIS 3974
KV+Q + +L +G PI+S
Sbjct: 1372 KVKQRL-DPPELPHGTSPILS 1391
>ref|XP_007132141.1| hypothetical protein PHAVU_011G070100g [Phaseolus vulgaris]
gi|561005141|gb|ESW04135.1| hypothetical protein
PHAVU_011G070100g [Phaseolus vulgaris]
Length = 1392
Score = 1729 bits (4478), Expect = 0.0
Identities = 886/1342 (66%), Positives = 1047/1342 (78%), Gaps = 18/1342 (1%)
Frame = +3
Query: 3 RKPIENALLDPHMGPANKSGICATCHGNFTSCPGHFGYLNLVLPVYNVGYFSSVIDILKS 182
+KPI LLDP MGPANKS CATCHGNF CPGH+GYLNL LPV+NVGY S+++ILK
Sbjct: 56 KKPIHGGLLDPRMGPANKSLGCATCHGNFHDCPGHYGYLNLALPVFNVGYLGSIVEILKC 115
Query: 183 ICKSCARILLSEKERRDYLKKMRNPRLEALQKSALAK-QIVKKCKPT--CHRCRYVNGMV 353
ICK CARILL E R+ +LKKMR+ + L K K +I+K C C RC Y+NG V
Sbjct: 116 ICKGCARILLDEDTRKKHLKKMRSSKKSELDKMDFVKVRIIKDCSKVVNCPRCGYINGSV 175
Query: 354 KKAGTMLGIVHDRSKIVDGTSEECRSAISHKKESKASFHVVH-VLNPVRVLALFKRMLDE 530
KK L I+HD SK + EE S +S K+SKA+ +V + +LNP +VL+LF++MLDE
Sbjct: 176 KKLPASLIIMHDCSKCKNNIVEELESTLSRIKDSKATANVSNRILNPFQVLSLFRKMLDE 235
Query: 531 DCELLYLRDRPEKLLITDIAVPPIPIRPSVFTDGGARSNENDITARLSTIMRANASLRQE 710
DCELLY+ +RPEKL+IT+I VPPI IRPSV D SNENDIT RL I++ANA LRQE
Sbjct: 236 DCELLYVAERPEKLIITNIVVPPIAIRPSVVMDESL-SNENDITERLKNIIQANAVLRQE 294
Query: 711 LQCTGSMSKCLADWELLQIEVAQYINSDVRGIPLSMQSSTPYRGFIQRLKGKQGRFRGNL 890
LQ + SK L WE+LQ EVAQ+INS+VRGIP MQS+ GF+QRLKGK GRFRGNL
Sbjct: 295 LQESSVSSKFLDGWEILQNEVAQFINSEVRGIPFYMQSTKQLAGFVQRLKGKHGRFRGNL 354
Query: 891 SGKRVEYTGRTVISPDPNLKITEVAIPILMAQVLTYPERVSHHNIEKLRQCVRNGPQKYP 1070
SGKRVEYTGRTVISPDPNLKI+EVAIPILMA +LTYPERV+HHNIEKLRQCVRNGP KYP
Sbjct: 355 SGKRVEYTGRTVISPDPNLKISEVAIPILMASILTYPERVTHHNIEKLRQCVRNGPDKYP 414
Query: 1071 GANFIRYPDGSLMHLRYSSRKRAADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMSHR 1250
GA +R G L+ RKRAADEL+ G IV+RHLEDGD+VLFNRQPSLHRMSIMSHR
Sbjct: 415 GARMLRRDGGHSWSLKVLCRKRAADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMSHR 474
Query: 1251 ARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGEI 1430
ARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA++LMGVQNNLCTPKNGEI
Sbjct: 475 ARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAILLMGVQNNLCTPKNGEI 534
Query: 1431 LVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIELWTGKQL 1610
LVASTQDFLTSSFL+TRKDTFYDR+AF+ +C+++GDG+D +DLPTPA++KP+ELW+GKQL
Sbjct: 535 LVASTQDFLTSSFLVTRKDTFYDRSAFTNICTFIGDGLDLIDLPTPAIVKPVELWSGKQL 594
Query: 1611 FSVLVRPNARMRVFLNLTVLEKNYSKSGE------SLCPNDGFVYFRNSELMSGQLGKAT 1772
FS+L+RP+A +V++NLTV EK Y+K + +LCPNDGFVYFRN+EL+SGQ+GK T
Sbjct: 595 FSLLLRPHANFKVYVNLTVKEKTYTKLDDKKRELKTLCPNDGFVYFRNTELISGQIGKVT 654
Query: 1773 LGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGELLNQQKK 1952
LGNGNKDGLFSVLLRDY AHAAA+CMNRLAKLSARWIGNHGFSIGIDDVQP E+L ++K
Sbjct: 655 LGNGNKDGLFSVLLRDYKAHAAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEILIKKKD 714
Query: 1953 ARIEEGYEACDELIQSYNKGNLKLQPGCDAAQTLEAEITGVLNKIRETAAKVCMEELHWR 2132
+ EGY+ CD IQ++NKG L+L GCDA QTLE +ITGVLN +R+ A KVCM+ LHWR
Sbjct: 715 ETLSEGYKKCDNHIQAFNKGKLELLAGCDAPQTLETQITGVLNGLRDMAGKVCMQTLHWR 774
Query: 2133 NSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKMPAAKGFV 2312
NSPLIMSQCGSKGSPINISQM+ACVGQQSVGGRRAPNGF+DRSLPHFP +K PAAKGFV
Sbjct: 775 NSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPNGFLDRSLPHFPLNAKTPAAKGFV 834
Query: 2313 ANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNAS 2492
ANSFY+GL+ATEFFFHTMGGREGLVDTAVKTADTGYMSR+L+K++EDL +HYD TVRNA
Sbjct: 835 ANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSMEDLFLHYDYTVRNAG 894
Query: 2493 GGVVQFLYGDDGMDPARMEGKSGVPLNLERLYLKVKATCPARTQAS-LSPSEVLRIVEEK 2669
G +VQF YGDDGMDP MEGK+G PLN ERL+LK KA CP + LS S+V ++V+EK
Sbjct: 895 GSIVQFCYGDDGMDPGGMEGKNGKPLNFERLFLKSKAICPNKDDDEVLSSSDVCKVVQEK 954
Query: 2670 LERHDASPAGGCSDAFKKLLLDFVHKRIDMFSSTKRALQLDEKYAGDSNVNFLENIAANI 2849
L S DFV + S K +L E+ D N L+ I
Sbjct: 955 LSEFGVSREVEKGVLEVGFSADFVQ---SLQSFIKDNTKLTEETFTDDNSQILKKFGERI 1011
Query: 2850 SGITSQQLQVFLETCITRYDSKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNV 3029
SGIT QL+VFL C++RY SK+ EPGTQMTLKTFHFAGVASMNV
Sbjct: 1012 SGITRAQLEVFLNICLSRYHSKKIEAGAPVGATGAHSIGEPGTQMTLKTFHFAGVASMNV 1071
Query: 3030 TLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKGCVEKTVLGEVAKSMKIVMTS 3209
TLGVPR+KEI+NG K ISTPIITA LE + +ARIVKG +EKT LG+VAKS+K+V+TS
Sbjct: 1072 TLGVPRVKEIMNGNKKISTPIITAILERTDCANTARIVKGRIEKTNLGQVAKSIKVVVTS 1131
Query: 3210 RQASIVVTLDMERIHASQLRISAYSVKQSILQHPRTKLKTQHIEVLDDKKLRILPPEADR 3389
R AS+V+TLDMERI + L I A VK+SILQ + KLK +HI++LD KKLR++P + DR
Sbjct: 1132 RLASVVITLDMERIQDAHLNIDANIVKESILQTKKAKLKPEHIKILDVKKLRVVPQDGDR 1191
Query: 3390 SKLQFELHSLRATLPKVIVKGISTVERAVINKDKG------KYNLLVEGTNLQAVMGTPG 3551
SKL F+L+ L+ LP V+VKGI T +R VI+K++ K+ LLVEGT + VMG G
Sbjct: 1192 SKLHFQLNYLKNLLPSVVVKGIKTADRVVISKEEDKITKAEKFKLLVEGTGFREVMGVEG 1251
Query: 3552 VDGRKTTSNHIIEVKETLGIEAARKCIISEIQYTMA-SHGMSIDIRHMMLLADLMTYKGE 3728
VDG KT SNHI EV++TLGIEAAR+CI+ EI+Y M +HGM+ID RHMMLLAD+MT G
Sbjct: 1252 VDGCKTVSNHIHEVRDTLGIEAARECIVKEIKYVMVDTHGMNIDTRHMMLLADVMTATGH 1311
Query: 3729 VLGITRFGIQKMKESVLMLASFEKTADHLFNASFNGRDDKIEGVSECIIMGIPMQIGTGI 3908
+LGI RFGI KM +SVLMLASFE+TAD LF AS GRDD I GVSE IIMGIP+ IGTG+
Sbjct: 1312 ILGINRFGISKMGKSVLMLASFERTADILFQASVRGRDDSIGGVSESIIMGIPITIGTGM 1371
Query: 3909 LKVRQSVKQVVKLNYGLDPIIS 3974
+KV+Q + ++ L +G PI+S
Sbjct: 1372 IKVKQRL-ELPDLPHGASPILS 1392
>ref|XP_003570766.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like
[Brachypodium distachyon]
Length = 1400
Score = 1720 bits (4454), Expect = 0.0
Identities = 881/1350 (65%), Positives = 1053/1350 (78%), Gaps = 28/1350 (2%)
Frame = +3
Query: 6 KPIENALLDPHMGPANKSGICATCHGNFTSCPGHFGYLNLVLPVYNVGYFSSVIDILKSI 185
KP+ N LLDP MG ++K G CATCHG++T CPGHFGY+ L LPV+NVGYF+ ++ +LK I
Sbjct: 59 KPVPNGLLDPRMGASDKCGECATCHGSYTECPGHFGYIKLALPVFNVGYFNKILAVLKCI 118
Query: 186 CKSCARILLSEKERRDYLKKMRNPRLEALQKSALAKQIVKKCKPT-CHRCRYVNGMVKKA 362
CK C+R+LL+E +++LKKMRNPR + +S++ ++ KC+P+ C C Y+NG+VKK
Sbjct: 119 CKGCSRVLLTENIHQEFLKKMRNPRAD---RSSIMIKVRDKCRPSRCSWCGYINGIVKKE 175
Query: 363 GTM-----LGIVHDRSKIVDGTSEECRSAISHKKESKASFHVVHVLNPVRVLALFKRMLD 527
G + IVHD SK +D ++EE RS +SHKKE K S VH L+PV VL+LF+R+ D
Sbjct: 176 GRRALKQTVVIVHDCSKNLDASTEEVRSVLSHKKE-KLSITSVHTLDPVTVLSLFRRITD 234
Query: 528 EDCELLYLRDRPEKLLITDIAVPPIPIRPSVFTDGGARSNENDITARLSTIMRANASLRQ 707
EDCELL + +RPE L+ITDIAVPP+PIRPS F G SNE+ IT+ L I+ AN+ L+
Sbjct: 235 EDCELLAIGERPENLIITDIAVPPVPIRPSRFVAGTTMSNEDSITSILRNIVNANSHLKL 294
Query: 708 ELQCTGSMSKCLADWELLQIEVAQYINSDVRGIPLSMQSSTPYRGFIQRLKGKQGRFRGN 887
+Q KC WE LQ V +YINSD S+Q S G IQRLKGK GRFRGN
Sbjct: 295 TIQDGQVPMKCFTWWEQLQDNVIEYINSDAS----SLQDSKDC-GLIQRLKGKTGRFRGN 349
Query: 888 LSGKRVEYTGRTVISPDPNLKITEVAIPILMAQVLTYPERVSHHNIEKLRQCVRNGPQKY 1067
LSGKR E+TGRTVISPDPNL+ITEVAIP+LMA+VLTYPERV+++NIEKLRQC+RNGP K+
Sbjct: 350 LSGKRTEHTGRTVISPDPNLRITEVAIPVLMARVLTYPERVTYYNIEKLRQCIRNGPHKH 409
Query: 1068 PGANFIRYPDGSLMHLRYSSRKRAADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMSH 1247
PGANFI PD + +HL Y R RAA +LKYG IVERHLEDGD+VLFNRQPSLHRMSIMSH
Sbjct: 410 PGANFIIQPDETKLHLNYCDRSRAARDLKYGCIVERHLEDGDIVLFNRQPSLHRMSIMSH 469
Query: 1248 RARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCTPKNGE 1427
RARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEA +LMGVQ+NLCTPKNGE
Sbjct: 470 RARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEAFLLMGVQSNLCTPKNGE 529
Query: 1428 ILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIELWTGKQ 1607
ILVASTQDFLTSSFL+TRKDTFYDR+ F+L+CSY+GD M+ +DLPTPA+IKP+ELWTGKQ
Sbjct: 530 ILVASTQDFLTSSFLVTRKDTFYDRSYFTLLCSYLGDAMENIDLPTPAIIKPVELWTGKQ 589
Query: 1608 LFSVLVRPNARMRVFLNLTVLEKNYSKSGE-----------SLCPNDGFVYFRNSELMSG 1754
LFSVLVRPNA +VFLNLTV EK Y K E ++CPNDGFVYFRNSEL+SG
Sbjct: 590 LFSVLVRPNACTKVFLNLTVEEKVYIKHKERDKKAITVLEETMCPNDGFVYFRNSELLSG 649
Query: 1755 QLGKATLGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGEL 1934
QLGK TLGNGNK+G+FSVLLRDYN+HAAA+CMNRLAK SAR+IGNHGFSIG+DDVQPG+
Sbjct: 650 QLGKKTLGNGNKEGMFSVLLRDYNSHAAASCMNRLAKFSARFIGNHGFSIGVDDVQPGQS 709
Query: 1935 LNQQKKARIEEGYEACDELIQSYNKGNLKLQPGCDAAQTLEAEITGVLNKIRETAAKVCM 2114
LN++KK I+EGYE C++LI Y+KG+LK QPGC AQTLE++I+ VLNK+RETA CM
Sbjct: 710 LNKKKKVIIDEGYEECNKLIALYSKGHLKPQPGCSRAQTLESQISCVLNKLRETAGDDCM 769
Query: 2115 EELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKMP 2294
LHWRNSPLIMSQCGSKGSPINISQM+ CVGQQSVGG RAPNGFIDR+LPHFP SK P
Sbjct: 770 STLHWRNSPLIMSQCGSKGSPINISQMVVCVGQQSVGGCRAPNGFIDRTLPHFPINSKTP 829
Query: 2295 AAKGFVANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDD 2474
AAKGFVANSFYTGLTA+EFFFHTMGGREGLVDTAVKTADTGY+SRRL+K LEDLS+ YD
Sbjct: 830 AAKGFVANSFYTGLTASEFFFHTMGGREGLVDTAVKTADTGYLSRRLMKGLEDLSVFYDQ 889
Query: 2475 TVRNASGGVVQFLYGDDGMDPARMEGKSGVPLNLERLYLKVKATCPARTQASLSPSEVLR 2654
TVRNASGG+VQF+YGDDGMDP +MEGK G PLNL++L++KVKATCP R +LSP +L+
Sbjct: 890 TVRNASGGIVQFVYGDDGMDPVKMEGKGGSPLNLDQLFMKVKATCPQRGHDTLSPDVILQ 949
Query: 2655 IVEEKLERHDASPAGGCSDAFKKLLLDFVHKRIDMFSSTKRALQLDEKYAGDSNVNFLEN 2834
+ + L + + S +G CSD K++L F+ R+ M ST+RAL +DE + G + + E
Sbjct: 950 MFNDTLFKQETS-SGRCSDKLKEMLTKFLEDRVKMLRSTRRALHIDEDHVGRRDSSVEEC 1008
Query: 2835 IAANISGITSQQLQVFLETCITRYDSKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGV 3014
IAA+ISGI+++QLQVFL+TC +RY SK EPGTQMTLKTFHFAGV
Sbjct: 1009 IAADISGISAKQLQVFLDTCFSRYHSKIIEAGASVGPIGAHSIGEPGTQMTLKTFHFAGV 1068
Query: 3015 ASMNVTLGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKGCVEKTVLGEVAKSMK 3194
ASMNVTLGVPRIKEIIN AK STPIIT L D A VK +EK VLGEVA ++
Sbjct: 1069 ASMNVTLGVPRIKEIINAAKKTSTPIITTELLSGQDKSFAVKVKSSIEKVVLGEVAAAIN 1128
Query: 3195 IVMTSRQASIVVTLDMERIHA-SQLRISAYSVKQSILQHPR----TKLKTQHIEVLDDKK 3359
IV +++VV LDMERI A + IS+ SV+ SIL H R KL ++H+ V+D K
Sbjct: 1129 IVFKETDSNLVVKLDMERIEAQGYMGISSDSVRLSILNHRRIRLELKLTSEHVCVVDQAK 1188
Query: 3360 LRILPPEADRSKLQFELHSLRATLPKVIVKGISTVERAVIN------KDKGKYNLLVEGT 3521
LRI +S L ELH+L++ LPKVIVKGI TVERAV+N K +YNLLVEGT
Sbjct: 1189 LRIHAAGKGKSGLLLELHNLKSMLPKVIVKGIPTVERAVVNPVFRHDKTFDRYNLLVEGT 1248
Query: 3522 NLQAVMGTPGVDGRKTTSNHIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLL 3701
NL AV+GTPGVD +KT SNHI+EV +TLGIEAAR+ II EI+YT ++ M ID+RHMMLL
Sbjct: 1249 NLLAVLGTPGVDAKKTKSNHIMEVSQTLGIEAARRSIIDEIRYTFENNNMMIDLRHMMLL 1308
Query: 3702 ADLMTYKGEVLGITRFGIQKMKESVLMLASFEKTADHLFNASFNGRDDKIEGVSECIIMG 3881
AD+MT KGEVL +T GI KMK SVLMLASFE+T DHLFNAS+ GR D+IEGVSEC+IMG
Sbjct: 1309 ADVMTSKGEVLPMTAHGIAKMKTSVLMLASFERTMDHLFNASYAGRVDEIEGVSECVIMG 1368
Query: 3882 IPMQIGTGILKVRQSVKQVVKLNYGLDPII 3971
+PM+ GTGILKV+Q + + + Y DP++
Sbjct: 1369 MPMKPGTGILKVKQRLPDLPEFQYQPDPLV 1398
>ref|XP_002985715.1| hypothetical protein SELMODRAFT_446351 [Selaginella moellendorffii]
gi|300146624|gb|EFJ13293.1| hypothetical protein
SELMODRAFT_446351 [Selaginella moellendorffii]
Length = 1393
Score = 1719 bits (4451), Expect = 0.0
Identities = 863/1337 (64%), Positives = 1041/1337 (77%), Gaps = 13/1337 (0%)
Frame = +3
Query: 3 RKPIENALLDPHMGPANKSGICATCHGNFTSCPGHFGYLNLVLPVYNVGYFSSVIDILKS 182
RKP+ +LD +G +NK G C TC G CPGHFGY+ L LPV+++GYF +I IL+
Sbjct: 64 RKPLPYGVLDTRLGTSNKKGQCTTCDGKLADCPGHFGYIKLELPVFHIGYFKDIIVILQC 123
Query: 183 ICK---SCARILLSEKERRDYLKKMRNPRLEALQKSALAKQIVKKCKPT--CHRCRYVNG 347
ICK S ++ S++ER+ + ++M+NPR E L+K K+I CK C RC +NG
Sbjct: 124 ICKASFSLLEVVASQEERQKWQRRMQNPRSEILRKKEYLKKINDLCKKVRACPRCGDING 183
Query: 348 MVKKAGTMLGIVHDRS----KIVDGTSEECRSAISHKKESKASF-HVVHVLNPVRVLALF 512
+VKK G+ L I+HD+ + + + + A+ KE K ++ L P++VL LF
Sbjct: 184 VVKKLGSTLKIIHDKYAKNYEAFEEMAHKFDDAVKVNKEMKGYMKNIQEDLTPLKVLGLF 243
Query: 513 KRMLDEDCELLYLRDRPEKLLITDIAVPPIPIRPSVFTDGGARSNENDITARLSTIMRAN 692
++++ EDC +L L DRPE+L++ + VPP+ IRPSV D SNE+D+T +L I+ N
Sbjct: 244 EKIIGEDCVVLDLVDRPEQLIVQHMPVPPVAIRPSVEMDAAVGSNEDDVTIKLMHIIEQN 303
Query: 693 ASLRQELQCTGSMSKCLADWELLQIEVAQYINSDVRGIPLSMQSSTPYRGFIQRLKGKQG 872
+R L+ S++KC+ W+ LQI+VA YINS++ G+P +MQ+ P RGF+QRLKGKQG
Sbjct: 304 NQIRACLESGLSIAKCMEIWDFLQIQVAMYINSELPGLPPNMQTGKPLRGFVQRLKGKQG 363
Query: 873 RFRGNLSGKRVEYTGRTVISPDPNLKITEVAIPILMAQVLTYPERVSHHNIEKLRQCVRN 1052
RFRGNLSGKRV++TGRTVISPDPNLK++EVA+PILMAQ LTYPE+VS HNIEKLRQ V N
Sbjct: 364 RFRGNLSGKRVDFTGRTVISPDPNLKVSEVAVPILMAQTLTYPEKVSAHNIEKLRQRVIN 423
Query: 1053 GPQKYPGANFIRYPDGSLMHLRYSSRKRAADELKYGYIVERHLEDGDVVLFNRQPSLHRM 1232
G +K+PGANF+ +PDG L++ RKR A ELKYG +VERHLEDGD+VLFNRQPSLHRM
Sbjct: 424 GKEKHPGANFVVFPDGVKRFLKFGDRKRIASELKYGDVVERHLEDGDIVLFNRQPSLHRM 483
Query: 1233 SIMSHRARIMPWRTLRFNESVCNPYNADFDGDEMNLHVPQTEEARTEALMLMGVQNNLCT 1412
SIM HRAR+MPWRTLRFNESVCNPYNADFDGDEMN+HVPQTEEARTEAL LMGVQNNLCT
Sbjct: 484 SIMCHRARVMPWRTLRFNESVCNPYNADFDGDEMNMHVPQTEEARTEALTLMGVQNNLCT 543
Query: 1413 PKNGEILVASTQDFLTSSFLITRKDTFYDRAAFSLMCSYMGDGMDPVDLPTPALIKPIEL 1592
PKNGEILVASTQDFLTSSFLITR+DTFYDR F+LMCSYMGD ++ +DLPTPA++KP+EL
Sbjct: 544 PKNGEILVASTQDFLTSSFLITRRDTFYDRGQFALMCSYMGDAVEHIDLPTPAILKPVEL 603
Query: 1593 WTGKQLFSVLVRPNARMRVFLNLTVLEKNYSKSGESLCPNDGFVYFRNSELMSGQLGKAT 1772
WTGKQLF VL+RP+AR++VFLN V EKN+ K E++CP DG+V+F+NSEL+ GQLGK T
Sbjct: 604 WTGKQLFGVLIRPSARIKVFLNFVVCEKNHKKGTETMCPKDGYVFFKNSELICGQLGKGT 663
Query: 1773 LGNGNKDGLFSVLLRDYNAHAAAACMNRLAKLSARWIGNHGFSIGIDDVQPGELLNQQKK 1952
LGNG+KDGLF+VLLRDY AAA+CMNRLAKLSARWIGNHGFSIGIDDVQPG L +K+
Sbjct: 664 LGNGSKDGLFTVLLRDYGEQAAASCMNRLAKLSARWIGNHGFSIGIDDVQPGSRLTVEKE 723
Query: 1953 ARIEEGYEACDELIQSYNKGNLKLQPGCDAAQTLEAEITGVLNKIRETAAKVCMEELHWR 2132
RI EGY ACD+ I +NKG L LQPGCDAAQTLE+EITG LNKIRE A +VC+ ELHWR
Sbjct: 724 KRIAEGYRACDKHISLFNKGQLTLQPGCDAAQTLESEITGELNKIREAAGQVCVNELHWR 783
Query: 2133 NSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPNGFIDRSLPHFPRKSKMPAAKGFV 2312
NSPLIMSQCGSKGS INISQMIACVGQQSV G RAPNGFI+RSLPHFPR K P AKGFV
Sbjct: 784 NSPLIMSQCGSKGSVINISQMIACVGQQSVSGHRAPNGFIERSLPHFPRNDKTPQAKGFV 843
Query: 2313 ANSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIHYDDTVRNAS 2492
ANSFY+GLTATEF FHTMGGREGLVDTAVKTA+TGYMSRRL+KALEDLS YD TVRN+S
Sbjct: 844 ANSFYSGLTATEFIFHTMGGREGLVDTAVKTAETGYMSRRLMKALEDLSCQYDGTVRNSS 903
Query: 2493 GGVVQFLYGDDGMDPARMEGKSGVPLNLERLYLKVKATCPARTQASLSPSEVLRIVEEKL 2672
G +VQ +YGDD MDP MEG++G PLNL+R+ +K KATCP T +L PSE+ +IVE K
Sbjct: 904 GVIVQLIYGDDSMDPVSMEGQNGTPLNLDRVLMKAKATCPRGTTPALPPSELWKIVESKF 963
Query: 2673 ERHDASPAGGCSDAFKKLLLDFVHKRIDMFSSTKRALQLDEKYAGDSNVNFLENIAANIS 2852
+ + CS AF L F+ K D SST++ L L G+ + EN+AAN+S
Sbjct: 964 SQDGSE----CSTAFLDSLRKFLRKEFDTISSTRKRLSLPLDDFGNVDD---ENVAANVS 1016
Query: 2853 GITSQQLQVFLETCITRYDSKRXXXXXXXXXXXXXXXXEPGTQMTLKTFHFAGVASMNVT 3032
G+TS+QL+VFL TCI RY K+ EPGTQMTLKTFHFAGVASMN+T
Sbjct: 1017 GLTSRQLEVFLNTCIGRYHRKKLDPGTAVGAIGAQSIGEPGTQMTLKTFHFAGVASMNIT 1076
Query: 3033 LGVPRIKEIINGAKNISTPIITATLECDNDVKSARIVKGCVEKTVLGEVAKSMKIVMTSR 3212
LGVPRIKEIIN +K ISTPIITA L +NDVK+ARIVKG +EKT LG+VAKS+KIV+
Sbjct: 1077 LGVPRIKEIINASKKISTPIITAKLVSENDVKAARIVKGRIEKTALGDVAKSIKIVLRPG 1136
Query: 3213 QASIVVTLDMERIHASQLRISAYSVKQSILQHPR---TKLKTQHIEVLDDKKLRILPPEA 3383
QA + + LDM+RI++ QL I A +V +++L+ P+ KLK QH++V DD+ + + PE+
Sbjct: 1137 QAFVSIKLDMDRIYSLQLDIRAETVAEAVLKFPKIKSMKLKEQHVKVNDDRSISLTTPES 1196
Query: 3384 DRSKLQFELHSLRATLPKVIVKGISTVERAVINKDKGKYNLLVEGTNLQAVMGTPGVDGR 3563
DR K+ F LHSL+ LPKVIVKGI TVERAVIN++KGKYNLLVEGTNL+AVMGT GVDGR
Sbjct: 1197 DRKKMLFALHSLQNMLPKVIVKGIPTVERAVINQEKGKYNLLVEGTNLKAVMGTEGVDGR 1256
Query: 3564 KTTSNHIIEVKETLGIEAARKCIISEIQYTMASHGMSIDIRHMMLLADLMTYKGEVLGIT 3743
+TTSNHI E E LGIEAAR II EIQYTM SHGMSID RHMMLLAD+MTY+GE+LGIT
Sbjct: 1257 ETTSNHIFETVEVLGIEAARNGIIKEIQYTMGSHGMSIDQRHMMLLADVMTYRGEILGIT 1316
Query: 3744 RFGIQKMKESVLMLASFEKTADHLFNASFNGRDDKIEGVSECIIMGIPMQIGTGILKVRQ 3923
RFG+ KMK+SVLMLASFEKT DHLF AS +GR D+IEGVSECIIMGIPM +GTG+ KVRQ
Sbjct: 1317 RFGMAKMKDSVLMLASFEKTTDHLFAASVHGRTDQIEGVSECIIMGIPMPLGTGLFKVRQ 1376
Query: 3924 SVKQVVKLNYGLDPIIS 3974
V ++ KL YG P+ S
Sbjct: 1377 KVGRIPKLIYGPPPLFS 1393