BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00002616
         (1184 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [V...   602   e-170
ref|XP_006472809.1| PREDICTED: replication factor C subunit 3-li...   596   e-168
ref|XP_006434237.1| hypothetical protein CICLE_v10001597mg [Citr...   594   e-167
ref|XP_003526636.1| PREDICTED: replication factor C subunit 3-li...   592   e-167
ref|XP_002520343.1| replication factor C / DNA polymerase III ga...   587   e-165
gb|EXB60106.1| Replication factor C subunit 5 [Morus notabilis] ...   585   e-164
ref|XP_003523440.1| PREDICTED: replication factor C subunit 3-li...   584   e-164
ref|XP_002302226.1| replication factor C 36 kDA family protein [...   584   e-164
ref|XP_004502480.1| PREDICTED: replication factor C subunit 5-li...   581   e-163
ref|XP_003602039.1| Replication factor C subunit [Medicago trunc...   580   e-163
ref|XP_004502481.1| PREDICTED: replication factor C subunit 5-li...   576   e-162
ref|NP_001048280.1| Os02g0775200 [Oryza sativa Japonica Group] g...   575   e-161
ref|XP_003570529.1| PREDICTED: replication factor C subunit 5-li...   571   e-160
dbj|BAB16439.1| replication factor C 36kDa subunit [Oryza sativa...   571   e-160
ref|XP_007137424.1| hypothetical protein PHAVU_009G126000g [Phas...   569   e-160
ref|XP_004242038.1| PREDICTED: replication factor C subunit 5-li...   569   e-160
dbj|BAK01840.1| predicted protein [Hordeum vulgare subsp. vulgar...   569   e-160
ref|XP_006365532.1| PREDICTED: replication factor C subunit 3-li...   568   e-159
gb|ACG35868.1| replication factor C subunit 3 [Zea mays]              568   e-159
ref|XP_006856708.1| hypothetical protein AMTR_s00054p00174840 [A...   567   e-159

>ref|XP_002285868.1| PREDICTED: replication factor C subunit 5 [Vitis vinifera]
            gi|302141794|emb|CBI18997.3| unnamed protein product
            [Vitis vinifera]
          Length = 360

 Score =  602 bits (1553), Expect = e-170
 Identities = 309/360 (85%), Positives = 331/360 (91%), Gaps = 2/360 (0%)
 Frame = -1

Query: 1094 MAESTAPMEIDSSVEPSMP-NKGKSVIVAAS-EAKATPWVEKYRPQSLADVAAHRDIVDT 921
            MAE+   M+ID      +  NKGKSV+V    + KATPWVEKYRPQSLADVAAHRDIVDT
Sbjct: 1    MAEAVTVMDIDEEDNHLLKANKGKSVVVGGPPDRKATPWVEKYRPQSLADVAAHRDIVDT 60

Query: 920  IDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQ 741
            IDRLTSEN+LPHLLLYGPPGTGKTSTILAVARKLYG QFHNMILELNASDDRGIDVVRQQ
Sbjct: 61   IDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGEQFHNMILELNASDDRGIDVVRQQ 120

Query: 740  IQNFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKI 561
            IQ+FASTQSFSFG KS VKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKI
Sbjct: 121  IQDFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKI 180

Query: 560  IPALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNILQ 381
            IPALQSRCTRFRFAPLDA HVTERLKHVI+AE L+V +SGL ALVRLS+GDMRKALNILQ
Sbjct: 181  IPALQSRCTRFRFAPLDAVHVTERLKHVINAEKLDVSESGLAALVRLSSGDMRKALNILQ 240

Query: 380  STHMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDIV 201
            STHMASQ ITEEAVYLCTGNP+PKDIEQISYWLLNESFA SF  IS++KMRKGLALVD+V
Sbjct: 241  STHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFAASFDRISEVKMRKGLALVDVV 300

Query: 200  REVTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAAK 21
            REVTMF+F+IKMPSD RV LINDLADIEYRLSFGCNDKLQLGSL+++FTRAR+A+VAAAK
Sbjct: 301  REVTMFVFKIKMPSDVRVQLINDLADIEYRLSFGCNDKLQLGSLIASFTRARAALVAAAK 360


>ref|XP_006472809.1| PREDICTED: replication factor C subunit 3-like [Citrus sinensis]
          Length = 364

 Score =  596 bits (1536), Expect = e-168
 Identities = 305/361 (84%), Positives = 332/361 (91%), Gaps = 4/361 (1%)
 Frame = -1

Query: 1091 AESTAPMEIDSSVEPSMPNK--GKSVIVAAS--EAKATPWVEKYRPQSLADVAAHRDIVD 924
            AE+ + M+ID     ++  K  GK+VIV+ +  + KA+PWVEKYRPQSLADVAAHRDIVD
Sbjct: 4    AETVSLMDIDEDENKNLKPKDNGKNVIVSGTPPDIKASPWVEKYRPQSLADVAAHRDIVD 63

Query: 923  TIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQ 744
            TIDRLTSEN+LPHLLLYGPPGTGKTSTILAVARKLYGAQ+HNMILELNASDDRGIDVVRQ
Sbjct: 64   TIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQ 123

Query: 743  QIQNFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNK 564
            QIQ+FASTQSFSFGVK+ VKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICN VNK
Sbjct: 124  QIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNK 183

Query: 563  IIPALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNIL 384
            IIPALQSRCTRFRFAPL+  HVTERLKHVI+AEGL+V + GL ALVRL NGDMRKALNIL
Sbjct: 184  IIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNIL 243

Query: 383  QSTHMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDI 204
            QSTHMASQ ITEEAVYLCTGNP+PKDIEQISYWLLNESFA SF+ IS+MKMRKGLALVDI
Sbjct: 244  QSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMKMRKGLALVDI 303

Query: 203  VREVTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAA 24
            VREVTMF+F+IKMPSD RV L+NDLADIEYRLSFGCNDKLQLGS++S FT+ARSAIVAAA
Sbjct: 304  VREVTMFVFKIKMPSDVRVRLMNDLADIEYRLSFGCNDKLQLGSIISTFTQARSAIVAAA 363

Query: 23   K 21
            K
Sbjct: 364  K 364


>ref|XP_006434237.1| hypothetical protein CICLE_v10001597mg [Citrus clementina]
            gi|557536359|gb|ESR47477.1| hypothetical protein
            CICLE_v10001597mg [Citrus clementina]
          Length = 364

 Score =  594 bits (1532), Expect = e-167
 Identities = 304/361 (84%), Positives = 331/361 (91%), Gaps = 4/361 (1%)
 Frame = -1

Query: 1091 AESTAPMEIDSSVEPSMPNK--GKSVIVAAS--EAKATPWVEKYRPQSLADVAAHRDIVD 924
            AE+ + M+ D     ++  K  GK+VIV+ +  + KA+PWVEKYRPQSLADVAAHRDIVD
Sbjct: 4    AETVSLMDFDEDENQNLKPKDNGKNVIVSGTPPDIKASPWVEKYRPQSLADVAAHRDIVD 63

Query: 923  TIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQ 744
            TIDRLTSEN+LPHLLLYGPPGTGKTSTILAVARKLYGAQ+HNMILELNASDDRGIDVVRQ
Sbjct: 64   TIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQ 123

Query: 743  QIQNFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNK 564
            QIQ+FASTQSFSFGVK+ VKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICN VNK
Sbjct: 124  QIQDFASTQSFSFGVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNQVNK 183

Query: 563  IIPALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNIL 384
            IIPALQSRCTRFRFAPL+  HVTERLKHVI+AEGL+V + GL ALVRL NGDMRKALNIL
Sbjct: 184  IIPALQSRCTRFRFAPLEPVHVTERLKHVIEAEGLDVTEGGLAALVRLCNGDMRKALNIL 243

Query: 383  QSTHMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDI 204
            QSTHMASQ ITEEAVYLCTGNP+PKDIEQISYWLLNESFA SF+ IS+MKMRKGLALVDI
Sbjct: 244  QSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNESFADSFKRISEMKMRKGLALVDI 303

Query: 203  VREVTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAA 24
            VREVTMF+F+IKMPSD RV L+NDLADIEYRLSFGCNDKLQLGS++S FT+ARSAIVAAA
Sbjct: 304  VREVTMFVFKIKMPSDVRVRLMNDLADIEYRLSFGCNDKLQLGSIISTFTQARSAIVAAA 363

Query: 23   K 21
            K
Sbjct: 364  K 364


>ref|XP_003526636.1| PREDICTED: replication factor C subunit 3-like [Glycine max]
          Length = 361

 Score =  592 bits (1527), Expect = e-167
 Identities = 300/360 (83%), Positives = 327/360 (90%), Gaps = 3/360 (0%)
 Frame = -1

Query: 1094 MAESTAPMEIDSSVEPSMPNKGKSVIVAASE---AKATPWVEKYRPQSLADVAAHRDIVD 924
            MA++T PM+ID     + P+KGKSV+ A +     KA PWVEKYRPQSL DVAAHRDIVD
Sbjct: 1    MAQTTHPMDIDDHTYTASPDKGKSVVFAGNPPAAGKAIPWVEKYRPQSLDDVAAHRDIVD 60

Query: 923  TIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQ 744
            TIDRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG+Q+ NMILELNASDDRGIDVVRQ
Sbjct: 61   TIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNASDDRGIDVVRQ 120

Query: 743  QIQNFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNK 564
            QIQ+FASTQS SFGVKS VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICNHVNK
Sbjct: 121  QIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNK 180

Query: 563  IIPALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNIL 384
            IIPALQSRCTRFRFAPLDA HVTERLKHVI AEGL+V+DSGL A VRLSNGDMRKALNIL
Sbjct: 181  IIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVEDSGLAAFVRLSNGDMRKALNIL 240

Query: 383  QSTHMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDI 204
            QSTHMASQ ITEEAVYLCTGNP+PKDIE ISYWLLNE FA SF+ I +MK RKGLAL+DI
Sbjct: 241  QSTHMASQQITEEAVYLCTGNPLPKDIELISYWLLNEQFADSFKRIDEMKTRKGLALIDI 300

Query: 203  VREVTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAA 24
            VREVTMF+F+IKMPS  RV L+NDLADIEYRLSFGCNDKLQLGS++++FTRARSA+VAAA
Sbjct: 301  VREVTMFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 360


>ref|XP_002520343.1| replication factor C / DNA polymerase III gamma-tau subunit, putative
            [Ricinus communis] gi|223540562|gb|EEF42129.1|
            replication factor C / DNA polymerase III gamma-tau
            subunit, putative [Ricinus communis]
          Length = 360

 Score =  587 bits (1514), Expect = e-165
 Identities = 300/363 (82%), Positives = 329/363 (90%), Gaps = 5/363 (1%)
 Frame = -1

Query: 1094 MAESTAPMEIDSSVEP-----SMPNKGKSVIVAASEAKATPWVEKYRPQSLADVAAHRDI 930
            MA+    M+ID  V+      S PNKGK+V V   + KATPWVEKYRPQSLADVAAHRDI
Sbjct: 1    MADVVTIMDIDEDVKEKQNQLSKPNKGKNVFV---DTKATPWVEKYRPQSLADVAAHRDI 57

Query: 929  VDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVV 750
            VDTIDRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG Q+HNMILELNASDDRGIDVV
Sbjct: 58   VDTIDRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGVQYHNMILELNASDDRGIDVV 117

Query: 749  RQQIQNFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 570
            RQQIQ+FASTQSFSF  KS VKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV
Sbjct: 118  RQQIQDFASTQSFSFDAKSAVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 177

Query: 569  NKIIPALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALN 390
            NKIIPALQSRCTRFRFAPLD  HVT+RLKHVI+AEGL+V + GL A+VRLSNGDMRKALN
Sbjct: 178  NKIIPALQSRCTRFRFAPLDPIHVTDRLKHVIEAEGLDVPEPGLAAVVRLSNGDMRKALN 237

Query: 389  ILQSTHMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALV 210
            ILQSTHMASQ ITEEAV+LCTGNP+PKDI+QISYWLLNESFA SF+ IS++K +KGLALV
Sbjct: 238  ILQSTHMASQQITEEAVHLCTGNPLPKDIQQISYWLLNESFAESFKRISEIKTKKGLALV 297

Query: 209  DIVREVTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVA 30
            DIVREVTMF+F+IKMPSD RV LIND+ADIEYRLSFGC+DKLQLGSL+++FT ARSA+VA
Sbjct: 298  DIVREVTMFVFKIKMPSDVRVQLINDMADIEYRLSFGCSDKLQLGSLVASFTWARSALVA 357

Query: 29   AAK 21
            AAK
Sbjct: 358  AAK 360


>gb|EXB60106.1| Replication factor C subunit 5 [Morus notabilis]
            gi|587990838|gb|EXC75062.1| Replication factor C subunit
            5 [Morus notabilis]
          Length = 365

 Score =  585 bits (1509), Expect = e-164
 Identities = 301/351 (85%), Positives = 326/351 (92%), Gaps = 3/351 (0%)
 Frame = -1

Query: 1064 DSSVEPSMPNKGKSVIVAASEAKATPWVEKYRPQSLADVAAHRDIVDTIDRLTSENKLPH 885
            D S +P   NKGKS   A S+ KATPWVEKYRPQSLADVAAHRDI+DTIDRLTSEN+LPH
Sbjct: 18   DRSAKPI--NKGKSG-AAPSDGKATPWVEKYRPQSLADVAAHRDIIDTIDRLTSENRLPH 74

Query: 884  LLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQIQNFASTQSFSF 705
            LLLYGPPGTGKTSTILAVARKLYGAQ+HNMILELNASDDRGIDVVRQQIQ+FASTQSFSF
Sbjct: 75   LLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQSFSF 134

Query: 704  GVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPALQSRCTRFR 525
            GVK+ VKLVLLDEADAMTKDAQFALRRVIEKYTKNTRF+LICN+VNKIIPALQSRCTRFR
Sbjct: 135  GVKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFSLICNNVNKIIPALQSRCTRFR 194

Query: 524  FAPLDATHVTERLKHVIDAEG---LNVDDSGLTALVRLSNGDMRKALNILQSTHMASQHI 354
            FAPLD  HV ERLKHVI+AEG   L+V +SGLTA VRLSNGDMRKALNILQSTHMAS+ I
Sbjct: 195  FAPLDPVHVNERLKHVIEAEGQVLLDVSESGLTAFVRLSNGDMRKALNILQSTHMASKKI 254

Query: 353  TEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDIVREVTMFIFR 174
            TEE VYLCTGNP+PKDIEQISYWLLNESFA SF+ IS+MK RKGLALVDIVREVTMF+F+
Sbjct: 255  TEEEVYLCTGNPLPKDIEQISYWLLNESFAESFKQISNMKGRKGLALVDIVREVTMFVFK 314

Query: 173  IKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAAK 21
            IKMPSDARV LINDLADIEYRLSFGCNDKLQLGSL+++FT+AR+++VAAAK
Sbjct: 315  IKMPSDARVQLINDLADIEYRLSFGCNDKLQLGSLIASFTKARASLVAAAK 365


>ref|XP_003523440.1| PREDICTED: replication factor C subunit 3-like [Glycine max]
          Length = 363

 Score =  584 bits (1506), Expect = e-164
 Identities = 300/362 (82%), Positives = 328/362 (90%), Gaps = 5/362 (1%)
 Frame = -1

Query: 1094 MAESTAPMEIDSS--VEPSMPNKGKSVIVAASEA---KATPWVEKYRPQSLADVAAHRDI 930
            MAE+   M+IDS      + P+K KSV+VA++ A   KA PWVEKYRP SL DVAAHRDI
Sbjct: 1    MAETNHHMDIDSDDHTYTARPDKAKSVVVASNPAAAGKAIPWVEKYRPLSLDDVAAHRDI 60

Query: 929  VDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVV 750
            VDTIDRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG+Q+ NMILELNASDDRGIDVV
Sbjct: 61   VDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYQNMILELNASDDRGIDVV 120

Query: 749  RQQIQNFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 570
            RQQIQ+FASTQS SFGVKS VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICNHV
Sbjct: 121  RQQIQDFASTQSLSFGVKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHV 180

Query: 569  NKIIPALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALN 390
            NKIIPALQSRCTRFRFAPLDA HVTERLKHVI AEGL+V+DSGL ALVRLSNGDMRKALN
Sbjct: 181  NKIIPALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVEDSGLAALVRLSNGDMRKALN 240

Query: 389  ILQSTHMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALV 210
            ILQSTHMASQ ITEE VYLCTGNP+PKDIEQISYWLLNE FA SF+ I +MK RKGLALV
Sbjct: 241  ILQSTHMASQQITEETVYLCTGNPLPKDIEQISYWLLNEQFADSFKRIDEMKTRKGLALV 300

Query: 209  DIVREVTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVA 30
            DIVREVT+F+F+IKMPS  RV L+NDLADIEYRLSFGCNDKLQLGS++++F+RARSA+VA
Sbjct: 301  DIVREVTLFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFSRARSALVA 360

Query: 29   AA 24
            AA
Sbjct: 361  AA 362


>ref|XP_002302226.1| replication factor C 36 kDA family protein [Populus trichocarpa]
            gi|222843952|gb|EEE81499.1| replication factor C 36 kDA
            family protein [Populus trichocarpa]
          Length = 363

 Score =  584 bits (1505), Expect = e-164
 Identities = 299/362 (82%), Positives = 328/362 (90%), Gaps = 5/362 (1%)
 Frame = -1

Query: 1094 MAESTAPMEIDSSVEP---SMPNKGKSVIVAASE--AKATPWVEKYRPQSLADVAAHRDI 930
            MAE+ A M+ID        S PNKGK V+V A+    KATPWVEKYRPQSLADVAAHRDI
Sbjct: 1    MAEAIALMDIDEEENQNHLSKPNKGKKVVVPATPPGGKATPWVEKYRPQSLADVAAHRDI 60

Query: 929  VDTIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVV 750
            +DTIDRLTSEN+LPHLLLYGPPGTGKTSTILAVARKLYGAQ+HNMILELNASDDRGIDVV
Sbjct: 61   IDTIDRLTSENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVV 120

Query: 749  RQQIQNFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 570
            R+QIQ+FASTQSFSFG K+ VKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV
Sbjct: 121  RKQIQDFASTQSFSFGAKASVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHV 180

Query: 569  NKIIPALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALN 390
            NKIIPALQSRCTRFRFAPLD  HV ERLKHVI+AEGL+V +SGL AL  LSNGDMRKALN
Sbjct: 181  NKIIPALQSRCTRFRFAPLDPMHVGERLKHVIEAEGLDVPESGLEALKCLSNGDMRKALN 240

Query: 389  ILQSTHMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALV 210
            ILQSTHMASQ ITEE VYLCTGNP+P+D++QI++WLLNESFA S++ IS++K RKGLALV
Sbjct: 241  ILQSTHMASQQITEETVYLCTGNPLPQDVQQITHWLLNESFAESYKRISEIKTRKGLALV 300

Query: 209  DIVREVTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVA 30
            DIVREVTMF+F+IKM SD RV LINDLADIEYRLSFGCNDKLQLGSL+++FTRARSA+VA
Sbjct: 301  DIVREVTMFVFKIKMQSDIRVPLINDLADIEYRLSFGCNDKLQLGSLIASFTRARSALVA 360

Query: 29   AA 24
            AA
Sbjct: 361  AA 362


>ref|XP_004502480.1| PREDICTED: replication factor C subunit 5-like isoform X1 [Cicer
            arietinum]
          Length = 363

 Score =  581 bits (1497), Expect = e-163
 Identities = 296/359 (82%), Positives = 327/359 (91%), Gaps = 4/359 (1%)
 Frame = -1

Query: 1088 ESTAPMEIDSSVE-PSMPNKGKSVIVAASEA---KATPWVEKYRPQSLADVAAHRDIVDT 921
            E T PM+ID +    S P+KGK+VI A + +   K+T WVEKYRPQSL DVAAHRDIVDT
Sbjct: 4    EGTYPMDIDQTNSFSSNPDKGKTVISAPNPSIGGKSTLWVEKYRPQSLDDVAAHRDIVDT 63

Query: 920  IDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQ 741
            IDRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYGAQ+HNMILELNASDDRGIDVVRQQ
Sbjct: 64   IDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQ 123

Query: 740  IQNFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKI 561
            IQ+FASTQS SFGVK  VKL+LLDEADAMTKDAQFALRRVIEKYTK+TRFALICNHVNKI
Sbjct: 124  IQDFASTQSLSFGVKPSVKLILLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKI 183

Query: 560  IPALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNILQ 381
            I ALQSRCTRFRFAPLDA HVTERLKHVI AEGL+V DSGL+ALVRLSNGDMRKALNILQ
Sbjct: 184  IQALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVQDSGLSALVRLSNGDMRKALNILQ 243

Query: 380  STHMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDIV 201
            STHMASQ ITEEAVYLCTGNP+PKDIEQISYWLLNE ++ S++ I D+K RKGLAL+DIV
Sbjct: 244  STHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSDSYKRIHDIKTRKGLALIDIV 303

Query: 200  REVTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAA 24
            REVTMF+F+IKMP+  RV L+NDLADIEYRLSFGCNDKLQLGS++++FTRARSA+VAAA
Sbjct: 304  REVTMFVFKIKMPAAVRVQLVNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 362


>ref|XP_003602039.1| Replication factor C subunit [Medicago truncatula]
            gi|355491087|gb|AES72290.1| Replication factor C subunit
            [Medicago truncatula]
          Length = 355

 Score =  580 bits (1494), Expect = e-163
 Identities = 298/360 (82%), Positives = 326/360 (90%), Gaps = 3/360 (0%)
 Frame = -1

Query: 1094 MAESTAPMEIDSSVEPSMPNKGKSVIVAASEA---KATPWVEKYRPQSLADVAAHRDIVD 924
            MAE T  M+ID      + +KGK+VI A + +   KA+ WVEKYRPQSL DVAAHRDIVD
Sbjct: 1    MAEETYAMDID------VTDKGKTVIAAGNPSFGGKASLWVEKYRPQSLDDVAAHRDIVD 54

Query: 923  TIDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQ 744
            TIDRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYGAQ+HNMILELNASDDRGIDVVRQ
Sbjct: 55   TIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQ 114

Query: 743  QIQNFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNK 564
            QIQ+FASTQS SFGVK  VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICNHVNK
Sbjct: 115  QIQDFASTQSLSFGVKPSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNK 174

Query: 563  IIPALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNIL 384
            IIPALQSRCTRFRFAPLDA HVTERLKHVI+AE L+V DSGL+ALVRLSNGDMRKALNIL
Sbjct: 175  IIPALQSRCTRFRFAPLDAVHVTERLKHVINAERLDVQDSGLSALVRLSNGDMRKALNIL 234

Query: 383  QSTHMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDI 204
            QSTHMASQ ITEEAVYLCTGNP+PKDIEQISYWLLNE ++ SF+ I DMK RKGLAL+DI
Sbjct: 235  QSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSESFKRIYDMKTRKGLALIDI 294

Query: 203  VREVTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAA 24
            VREVTMF+F+I MPS  RV L+NDLADIEYRLSFGCNDKLQLGS++++FTRARSA+VAAA
Sbjct: 295  VREVTMFVFKINMPSAVRVQLVNDLADIEYRLSFGCNDKLQLGSVVASFTRARSAMVAAA 354


>ref|XP_004502481.1| PREDICTED: replication factor C subunit 5-like isoform X2 [Cicer
            arietinum]
          Length = 364

 Score =  576 bits (1485), Expect = e-162
 Identities = 296/360 (82%), Positives = 327/360 (90%), Gaps = 5/360 (1%)
 Frame = -1

Query: 1088 ESTAPMEIDSSVE-PSMPNKGKSVIVAASEA---KATPWVEKYRPQSLADVAAHRDIVDT 921
            E T PM+ID +    S P+KGK+VI A + +   K+T WVEKYRPQSL DVAAHRDIVDT
Sbjct: 4    EGTYPMDIDQTNSFSSNPDKGKTVISAPNPSIGGKSTLWVEKYRPQSLDDVAAHRDIVDT 63

Query: 920  IDRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQ 741
            IDRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYGAQ+HNMILELNASDDRGIDVVRQQ
Sbjct: 64   IDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQ 123

Query: 740  IQNFASTQSFSFG-VKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNK 564
            IQ+FASTQS SFG VK  VKL+LLDEADAMTKDAQFALRRVIEKYTK+TRFALICNHVNK
Sbjct: 124  IQDFASTQSLSFGFVKPSVKLILLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNK 183

Query: 563  IIPALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNIL 384
            II ALQSRCTRFRFAPLDA HVTERLKHVI AEGL+V DSGL+ALVRLSNGDMRKALNIL
Sbjct: 184  IIQALQSRCTRFRFAPLDAVHVTERLKHVIKAEGLDVQDSGLSALVRLSNGDMRKALNIL 243

Query: 383  QSTHMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDI 204
            QSTHMASQ ITEEAVYLCTGNP+PKDIEQISYWLLNE ++ S++ I D+K RKGLAL+DI
Sbjct: 244  QSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSDSYKRIHDIKTRKGLALIDI 303

Query: 203  VREVTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAA 24
            VREVTMF+F+IKMP+  RV L+NDLADIEYRLSFGCNDKLQLGS++++FTRARSA+VAAA
Sbjct: 304  VREVTMFVFKIKMPAAVRVQLVNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 363


>ref|NP_001048280.1| Os02g0775200 [Oryza sativa Japonica Group]
            gi|75132556|sp|Q6YZ54.1|RFC3_ORYSJ RecName:
            Full=Replication factor C subunit 3; Short=OsRFC3;
            AltName: Full=Activator 1 subunit 3
            gi|46805779|dbj|BAD17147.1| putative replication factor C
            36kDa subunit [Oryza sativa Japonica Group]
            gi|46806135|dbj|BAD17365.1| putative replication factor C
            36kDa subunit [Oryza sativa Japonica Group]
            gi|113537811|dbj|BAF10194.1| Os02g0775200 [Oryza sativa
            Japonica Group] gi|215697717|dbj|BAG91711.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|218191668|gb|EEC74095.1| hypothetical protein
            OsI_09136 [Oryza sativa Indica Group]
          Length = 361

 Score =  575 bits (1483), Expect = e-161
 Identities = 287/357 (80%), Positives = 322/357 (90%), Gaps = 1/357 (0%)
 Frame = -1

Query: 1091 AESTAPMEIDSSVEP-SMPNKGKSVIVAASEAKATPWVEKYRPQSLADVAAHRDIVDTID 915
            A +  PM+ID++  P     KGK+ + +    +A PWVEKYRPQSL DVAAHRDIVDTID
Sbjct: 4    ATAATPMDIDAAAPPPGAAAKGKAPLSSTPGGRAAPWVEKYRPQSLGDVAAHRDIVDTID 63

Query: 914  RLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQIQ 735
            RLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG+Q+ NMILELNASD+RGIDVVRQQIQ
Sbjct: 64   RLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMILELNASDERGIDVVRQQIQ 123

Query: 734  NFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIP 555
            +FAS +S SFG K  VK+VLLDEADAMTKDAQFALRRVIEK+T++TRFALICNHVNKIIP
Sbjct: 124  DFASARSLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNKIIP 183

Query: 554  ALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNILQST 375
            ALQSRCTRFRFAPLD THV ERLKH+I +EGL+VDD GLTALVRLSNGDMRKALNILQST
Sbjct: 184  ALQSRCTRFRFAPLDGTHVRERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNILQST 243

Query: 374  HMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDIVRE 195
            HMAS+ ITEEAVYLCTGNPMPKDIEQI+YWLLNESF+TSF+ ISDMKMRKGLALVDI+RE
Sbjct: 244  HMASKQITEEAVYLCTGNPMPKDIEQIAYWLLNESFSTSFKCISDMKMRKGLALVDIIRE 303

Query: 194  VTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAA 24
            VTMF+F+I+MPSD R+ LINDLADIEYRLSF CNDKLQLG+L+S FT AR+A+VAAA
Sbjct: 304  VTMFVFKIQMPSDVRIKLINDLADIEYRLSFACNDKLQLGALISTFTGARTAMVAAA 360


>ref|XP_003570529.1| PREDICTED: replication factor C subunit 5-like [Brachypodium
            distachyon]
          Length = 358

 Score =  571 bits (1472), Expect = e-160
 Identities = 284/356 (79%), Positives = 325/356 (91%)
 Frame = -1

Query: 1091 AESTAPMEIDSSVEPSMPNKGKSVIVAASEAKATPWVEKYRPQSLADVAAHRDIVDTIDR 912
            A +TAPM+ID++  P   +KGK+ + AA+  +++PWVEKYRPQSLADVAAHRDIVDTIDR
Sbjct: 4    AATTAPMDIDAAAPPH--SKGKAPLSAAAAVRSSPWVEKYRPQSLADVAAHRDIVDTIDR 61

Query: 911  LTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQIQN 732
            LT EN+LPHLLLYGPPGTGKTSTILAVARK+YG+Q+ NMILELNASD+RGI VVRQQIQ+
Sbjct: 62   LTDENRLPHLLLYGPPGTGKTSTILAVARKIYGSQYGNMILELNASDERGIGVVRQQIQD 121

Query: 731  FASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPA 552
            FAS  S SFG K  VKLVLLDEADAMTKDAQFALRRVIEKYT++TRFALICNHVNKIIPA
Sbjct: 122  FASAHSLSFGAKPAVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPA 181

Query: 551  LQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNILQSTH 372
            LQSRCTRFRFAPLD +HV+ERL+H+I +EGL+VD+ GLTALVRLS+GDMRKALNILQSTH
Sbjct: 182  LQSRCTRFRFAPLDGSHVSERLQHIIKSEGLDVDEGGLTALVRLSSGDMRKALNILQSTH 241

Query: 371  MASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDIVREV 192
            MASQ ITEEAVYLCTGNPMPKDIEQI++WLLNE F+TSF+ ISDMKMRKGLAL+DI+REV
Sbjct: 242  MASQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKYISDMKMRKGLALIDIIREV 301

Query: 191  TMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAA 24
            TMF+F+IKMP + RV LINDLADIEYRL+F CNDKLQLG+L+S FT AR+A+VAAA
Sbjct: 302  TMFVFKIKMPCNVRVKLINDLADIEYRLTFACNDKLQLGALISTFTSARTAMVAAA 357


>dbj|BAB16439.1| replication factor C 36kDa subunit [Oryza sativa Japonica Group]
          Length = 367

 Score =  571 bits (1471), Expect = e-160
 Identities = 288/363 (79%), Positives = 323/363 (88%), Gaps = 7/363 (1%)
 Frame = -1

Query: 1091 AESTAPMEIDSSVEP-SMPNKGKSVIVAASEAKATPWVEKYRPQSLADVAAHRDIVDTID 915
            A +  PM+ID++  P     KGK+ + +    +A PWVEKYRPQSL DVAAHRDIVDTID
Sbjct: 4    ATAATPMDIDAAAPPPGAAAKGKAPLSSTPGGRAAPWVEKYRPQSLGDVAAHRDIVDTID 63

Query: 914  RLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQIQ 735
            RLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG+Q+ NMILELNASD+RGIDVVRQQIQ
Sbjct: 64   RLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYGNMILELNASDERGIDVVRQQIQ 123

Query: 734  NFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIP 555
            +FAS +S SFG K  VK+VLLDEADAMTKDAQFALRRVIEK+T++TRFALICNHVNKIIP
Sbjct: 124  DFASARSLSFGAKQSVKMVLLDEADAMTKDAQFALRRVIEKHTRSTRFALICNHVNKIIP 183

Query: 554  ALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNILQST 375
            ALQSRCTRFRFAPLD THV ERLKH+I +EGL+VDD GLTALVRLSNGDMRKALNILQST
Sbjct: 184  ALQSRCTRFRFAPLDGTHVRERLKHIIQSEGLDVDDGGLTALVRLSNGDMRKALNILQST 243

Query: 374  HMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFR------SISDMKMRKGLAL 213
            HMAS+ ITEEAVYLCTGNPMPKDIEQI+YWLLNESF+TSF+      SISDMKMRKGLAL
Sbjct: 244  HMASKQITEEAVYLCTGNPMPKDIEQIAYWLLNESFSTSFKCILNYQSISDMKMRKGLAL 303

Query: 212  VDIVREVTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIV 33
            VDI+REVTMF+F+I+MPSD R+ LINDLADIEYRLSF CNDKLQLG+L+S FT AR+A+V
Sbjct: 304  VDIIREVTMFVFKIQMPSDVRIKLINDLADIEYRLSFACNDKLQLGALISTFTGARTAMV 363

Query: 32   AAA 24
            AAA
Sbjct: 364  AAA 366


>ref|XP_007137424.1| hypothetical protein PHAVU_009G126000g [Phaseolus vulgaris]
            gi|561010511|gb|ESW09418.1| hypothetical protein
            PHAVU_009G126000g [Phaseolus vulgaris]
          Length = 359

 Score =  569 bits (1466), Expect = e-160
 Identities = 289/357 (80%), Positives = 318/357 (89%), Gaps = 3/357 (0%)
 Frame = -1

Query: 1085 STAPMEIDSSVEPSMPNKGKSVIVAASEA---KATPWVEKYRPQSLADVAAHRDIVDTID 915
            +T PMEIDS  +    + G+ VI +       KA PWVEKYRPQSL DVAAHRDIVDTID
Sbjct: 2    TTHPMEIDSDGDDHTHSAGECVIGSEDLPAFDKAIPWVEKYRPQSLDDVAAHRDIVDTID 61

Query: 914  RLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQIQ 735
            +LT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG++F NMILELNASDDRGIDVVRQQIQ
Sbjct: 62   KLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGSRFRNMILELNASDDRGIDVVRQQIQ 121

Query: 734  NFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIP 555
            +FASTQS SFGVK  VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICNHVNKIIP
Sbjct: 122  DFASTQSLSFGVKYSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIP 181

Query: 554  ALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNILQST 375
            ALQSRCTRFRFAPLDA HVTER+KHVI AEGL+V D GL ALVRLSNGDMRKALNILQST
Sbjct: 182  ALQSRCTRFRFAPLDAVHVTERMKHVIKAEGLDVQDDGLVALVRLSNGDMRKALNILQST 241

Query: 374  HMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDIVRE 195
            HMA+Q ITEEA+YLCTGNP+PKDIEQISYWLLNE +  SF+ I +MK RKGLALVDI+RE
Sbjct: 242  HMATQQITEEAIYLCTGNPLPKDIEQISYWLLNEQYTDSFKRIEEMKTRKGLALVDIIRE 301

Query: 194  VTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAA 24
            V MF+F+IKMPS  RV L+NDLADIEYRLSFGCNDKLQLGS++++FTRARSA+VAAA
Sbjct: 302  VIMFVFKIKMPSAVRVQLMNDLADIEYRLSFGCNDKLQLGSVIASFTRARSALVAAA 358


>ref|XP_004242038.1| PREDICTED: replication factor C subunit 5-like [Solanum lycopersicum]
          Length = 357

 Score =  569 bits (1466), Expect = e-160
 Identities = 285/358 (79%), Positives = 326/358 (91%)
 Frame = -1

Query: 1094 MAESTAPMEIDSSVEPSMPNKGKSVIVAASEAKATPWVEKYRPQSLADVAAHRDIVDTID 915
            MAE+ + M+ID     + P+KGK+ IV+ +E K+ PWVEK+RPQSL+DVAAHRDIV+TID
Sbjct: 1    MAETISSMDIDDDKIDTKPSKGKN-IVSNTEPKSVPWVEKFRPQSLSDVAAHRDIVETID 59

Query: 914  RLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQIQ 735
            RL S N+LPHLLLYGPPGTGKTSTILA+ARKLYG+Q  NM+LELNASDDRGIDVVRQQIQ
Sbjct: 60   RLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMQNMVLELNASDDRGIDVVRQQIQ 119

Query: 734  NFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIP 555
            +FASTQS SFG KS VKLVLLDEADAMTKDAQFALRRVIE+YT+NTRFALICN+VNK+IP
Sbjct: 120  DFASTQSISFGAKSAVKLVLLDEADAMTKDAQFALRRVIERYTRNTRFALICNNVNKVIP 179

Query: 554  ALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNILQST 375
            ALQSRCTRFRFAPLDA HV+ERLKHV++AE L+V + GL ALVRLSNGDMRKALNILQST
Sbjct: 180  ALQSRCTRFRFAPLDAVHVSERLKHVVEAEQLDVPEGGLKALVRLSNGDMRKALNILQST 239

Query: 374  HMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDIVRE 195
            HMASQ I+E+AVYLCTGNP+PKDIEQISYWLLNE FA S + IS++K RKGLALVDIVRE
Sbjct: 240  HMASQQISEDAVYLCTGNPLPKDIEQISYWLLNEPFAISCKRISEIKTRKGLALVDIVRE 299

Query: 194  VTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAAK 21
            VTMF+F+IKMP++ RV LIN++ADIEYRL+FGCNDKLQLGSL+SAFTRARSA+VAAAK
Sbjct: 300  VTMFVFKIKMPANVRVQLINEMADIEYRLTFGCNDKLQLGSLISAFTRARSALVAAAK 357


>dbj|BAK01840.1| predicted protein [Hordeum vulgare subsp. vulgare]
            gi|326531584|dbj|BAJ97796.1| predicted protein [Hordeum
            vulgare subsp. vulgare]
          Length = 359

 Score =  569 bits (1466), Expect = e-160
 Identities = 283/356 (79%), Positives = 322/356 (90%)
 Frame = -1

Query: 1091 AESTAPMEIDSSVEPSMPNKGKSVIVAASEAKATPWVEKYRPQSLADVAAHRDIVDTIDR 912
            A + APM+ID +  P    KGK+ + AA+  K++PWVEKYRPQSLADVAAHRDIVDTIDR
Sbjct: 4    ATAAAPMDIDGAAAPPA-FKGKAPLSAAAAVKSSPWVEKYRPQSLADVAAHRDIVDTIDR 62

Query: 911  LTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQIQN 732
            LT EN+LPHLLLYGPPGTGKTSTILAVARK+YG+Q+ NMILELNASD+RGI VVRQQIQ+
Sbjct: 63   LTDENRLPHLLLYGPPGTGKTSTILAVARKIYGSQYGNMILELNASDERGIGVVRQQIQD 122

Query: 731  FASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIPA 552
            FAS  S SFG K  VKLVLLDEADAMTKDAQFALRRVIEKYT++TRFALICNHVNKIIPA
Sbjct: 123  FASAHSLSFGAKPAVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKIIPA 182

Query: 551  LQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNILQSTH 372
            LQSRCTRFRFAPLD +HV+ERL+H+I +EGL+VD+ GL+ALVRLSNGDMRK+LNILQSTH
Sbjct: 183  LQSRCTRFRFAPLDGSHVSERLRHIIKSEGLDVDEGGLSALVRLSNGDMRKSLNILQSTH 242

Query: 371  MASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDIVREV 192
            MASQ ITEEAVYLCTGNPMPKDIEQI++WLLNE F+TSF+ I+DMKMRKGLAL+DI+REV
Sbjct: 243  MASQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKHIADMKMRKGLALIDIIREV 302

Query: 191  TMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAA 24
            TMF+F+IKMPS  RV LINDLADIEYRL+F CNDKLQLG+L+S FT AR+A+VAAA
Sbjct: 303  TMFVFKIKMPSSVRVKLINDLADIEYRLTFACNDKLQLGALISTFTTARTAMVAAA 358


>ref|XP_006365532.1| PREDICTED: replication factor C subunit 3-like [Solanum tuberosum]
          Length = 357

 Score =  568 bits (1465), Expect = e-159
 Identities = 284/358 (79%), Positives = 324/358 (90%)
 Frame = -1

Query: 1094 MAESTAPMEIDSSVEPSMPNKGKSVIVAASEAKATPWVEKYRPQSLADVAAHRDIVDTID 915
            MAE+ + M+ID     + PN GK+ IV+ +E ++ PWVEK+RPQSL+DVAAHRDIV+TID
Sbjct: 1    MAETISLMDIDDDKIDTKPNNGKN-IVSNTEPRSVPWVEKFRPQSLSDVAAHRDIVETID 59

Query: 914  RLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQIQ 735
            RL S N+LPHLLLYGPPGTGKTSTILA+ARKLYG+Q HNM+LELNASDDRGIDVVRQQIQ
Sbjct: 60   RLASSNRLPHLLLYGPPGTGKTSTILALARKLYGSQMHNMVLELNASDDRGIDVVRQQIQ 119

Query: 734  NFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIP 555
            +FASTQS SFG KS VKLVLLDEADAMTKDAQFALRRVIEKYT+NTRFAL+CN+VNK+IP
Sbjct: 120  DFASTQSISFGAKSAVKLVLLDEADAMTKDAQFALRRVIEKYTRNTRFALVCNNVNKVIP 179

Query: 554  ALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNILQST 375
            ALQSRCTRFRFAPLDA HV+ERLKHV++AE L+V + GL ALVRLSNGDMRKALNILQST
Sbjct: 180  ALQSRCTRFRFAPLDAVHVSERLKHVVEAEQLDVPEGGLKALVRLSNGDMRKALNILQST 239

Query: 374  HMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDIVRE 195
            HMASQ I+E+AVYLCTGNP+PKDIEQISYWLLNE F  S + IS++K RKGLALVDIVRE
Sbjct: 240  HMASQQISEDAVYLCTGNPLPKDIEQISYWLLNEPFTISCKRISEIKTRKGLALVDIVRE 299

Query: 194  VTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAAK 21
            VTMF+F+IKMP+  RV LIN++ADIEYRL+FGCNDKLQLGSL+SAFTRARSA+VAAAK
Sbjct: 300  VTMFVFKIKMPATVRVQLINEMADIEYRLTFGCNDKLQLGSLISAFTRARSALVAAAK 357


>gb|ACG35868.1| replication factor C subunit 3 [Zea mays]
          Length = 362

 Score =  568 bits (1464), Expect = e-159
 Identities = 286/358 (79%), Positives = 322/358 (89%), Gaps = 4/358 (1%)
 Frame = -1

Query: 1085 STAPMEIDSSVEPSMPN----KGKSVIVAASEAKATPWVEKYRPQSLADVAAHRDIVDTI 918
            + APM+ID++  P  P     KGK+++ A    +A PWVEKYRPQSLADVAAHRDIVDTI
Sbjct: 6    AAAPMDIDAAAPPPPPPGAAAKGKALLSAGG--RAAPWVEKYRPQSLADVAAHRDIVDTI 63

Query: 917  DRLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQI 738
            DRLT+EN+LPHLLLYGPPGTGKTSTILAVARKLYG+Q+ NMILELNASD+RGIDVVRQQI
Sbjct: 64   DRLTNENRLPHLLLYGPPGTGKTSTILAVARKLYGSQYSNMILELNASDERGIDVVRQQI 123

Query: 737  QNFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKII 558
            Q+FA  +S SFG +  VKLVLLDEADAMTKDAQFALRRVIEKYT++TRFALICNHVNKII
Sbjct: 124  QDFAGARSLSFGARPSVKLVLLDEADAMTKDAQFALRRVIEKYTRSTRFALICNHVNKII 183

Query: 557  PALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNILQS 378
            PALQSRCTRFRFAPLD +HV ERL+H+I +EGL+VDD GLTALVRLSNGDMRKALNILQS
Sbjct: 184  PALQSRCTRFRFAPLDGSHVRERLQHIIKSEGLSVDDGGLTALVRLSNGDMRKALNILQS 243

Query: 377  THMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDIVR 198
            THMASQ ITEEAVYLCTGNPMPKDIEQI++WLLNE F+TSF+ ISDMKMRKGLALVDI+R
Sbjct: 244  THMASQQITEEAVYLCTGNPMPKDIEQIAFWLLNEPFSTSFKYISDMKMRKGLALVDIIR 303

Query: 197  EVTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAA 24
            EVTMF+F+I+MPSD RV LIN+LADIEYRLSF CNDKLQLG+L+S FT  R+A+VAAA
Sbjct: 304  EVTMFVFKIQMPSDVRVKLINNLADIEYRLSFACNDKLQLGALISTFTDTRTAMVAAA 361


>ref|XP_006856708.1| hypothetical protein AMTR_s00054p00174840 [Amborella trichopoda]
            gi|548860608|gb|ERN18175.1| hypothetical protein
            AMTR_s00054p00174840 [Amborella trichopoda]
          Length = 359

 Score =  567 bits (1462), Expect = e-159
 Identities = 289/358 (80%), Positives = 316/358 (88%), Gaps = 4/358 (1%)
 Frame = -1

Query: 1082 TAPMEIDSSVEPSM----PNKGKSVIVAASEAKATPWVEKYRPQSLADVAAHRDIVDTID 915
            ++PM++D   E  M      KGK V       KATPWVEKYRPQSLADVAAH+DI+DT+D
Sbjct: 2    SSPMDVDVEREQDMRYLQTGKGKVVEREQLLPKATPWVEKYRPQSLADVAAHKDIIDTVD 61

Query: 914  RLTSENKLPHLLLYGPPGTGKTSTILAVARKLYGAQFHNMILELNASDDRGIDVVRQQIQ 735
            RLT+EN+LPHLLLYGPPGTGKTST+LAVARKLYG    NMILELNASDDRGIDVVRQQIQ
Sbjct: 62   RLTNENRLPHLLLYGPPGTGKTSTVLAVARKLYGGNLRNMILELNASDDRGIDVVRQQIQ 121

Query: 734  NFASTQSFSFGVKSPVKLVLLDEADAMTKDAQFALRRVIEKYTKNTRFALICNHVNKIIP 555
            +FASTQSFSFG KS VKLVLLDEADAMTKDAQFALRRVIEKYTK+TRFALICNHVNKIIP
Sbjct: 122  DFASTQSFSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIP 181

Query: 554  ALQSRCTRFRFAPLDATHVTERLKHVIDAEGLNVDDSGLTALVRLSNGDMRKALNILQST 375
            ALQSRCTRFRFAPLDA HV ERL++VI AEGL+VD+SGL+A+VRLSNGDMRKALNILQST
Sbjct: 182  ALQSRCTRFRFAPLDAAHVRERLQYVIKAEGLDVDESGLSAVVRLSNGDMRKALNILQST 241

Query: 374  HMASQHITEEAVYLCTGNPMPKDIEQISYWLLNESFATSFRSISDMKMRKGLALVDIVRE 195
            HMASQH++E+AVYLCTGNPMPKD+EQIS WLLNE FATS++ ISDMK  KGLALVDIVRE
Sbjct: 242  HMASQHVSEKAVYLCTGNPMPKDVEQISNWLLNEDFATSYKYISDMKTTKGLALVDIVRE 301

Query: 194  VTMFIFRIKMPSDARVHLINDLADIEYRLSFGCNDKLQLGSLLSAFTRARSAIVAAAK 21
            VTMFIF IKMPS  RV LINDLADIEYRLSFGCNDKLQLGSL+ +FT  R A+ AAAK
Sbjct: 302  VTMFIFMIKMPSTVRVQLINDLADIEYRLSFGCNDKLQLGSLIGSFTHVRCAMEAAAK 359