BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Sinomenium22_contig00001484
         (389 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007031678.1| RNA recognition motif-containing protein iso...   111   9e-23
ref|XP_007031677.1| RNA recognition motif-containing protein iso...   111   9e-23
ref|XP_006397101.1| hypothetical protein EUTSA_v10029015mg [Eutr...   111   1e-22
ref|NP_192749.2| RNA recognition motif-containing protein [Arabi...   109   5e-22
ref|XP_006371385.1| RNA recognition motif-containing family prot...   109   5e-22
ref|XP_007143666.1| hypothetical protein PHAVU_007G091200g [Phas...   108   6e-22
ref|XP_003592001.1| Peptidyl-prolyl cis-trans isomerase [Medicag...   108   6e-22
gb|ACJ85779.1| unknown [Medicago truncatula]                          108   6e-22
ref|XP_006589447.1| PREDICTED: splicing factor 3B subunit 4-like...   108   8e-22
ref|XP_006589446.1| PREDICTED: splicing factor 3B subunit 4-like...   108   8e-22
gb|ABC86742.1| RNA recognition motif-containing protein [Vitis p...   107   2e-21
ref|XP_002271789.1| PREDICTED: 33 kDa ribonucleoprotein, chlorop...   107   2e-21
ref|XP_004141533.1| PREDICTED: spliceosome-associated protein 49...   106   3e-21
ref|XP_002874610.1| RNA recognition motif-containing protein [Ar...   106   3e-21
ref|XP_006356004.1| PREDICTED: splicing factor 3B subunit 4-like...   106   4e-21
ref|XP_006356003.1| PREDICTED: splicing factor 3B subunit 4-like...   106   4e-21
ref|XP_004250692.1| PREDICTED: splicing regulator RBM11-like [So...   106   4e-21
ref|XP_004156245.1| PREDICTED: splicing factor 3B subunit 4-like...   105   5e-21
ref|XP_004141629.1| PREDICTED: splicing regulator RBM11-like [Cu...   105   5e-21
gb|EXC32466.1| Splicing factor 3B subunit 4 [Morus notabilis]         105   9e-21

>ref|XP_007031678.1| RNA recognition motif-containing protein isoform 2, partial
           [Theobroma cacao] gi|508710707|gb|EOY02604.1| RNA
           recognition motif-containing protein isoform 2, partial
           [Theobroma cacao]
          Length = 149

 Score =  111 bits (278), Expect = 9e-23
 Identities = 54/82 (65%), Positives = 63/82 (76%)
 Frame = +3

Query: 144 MPGNRACTLYVGNLDEKVSDRVLYEILIQAGRIVDLHIPRDKETNRPKGXXXXXXXXXXX 323
           M GN  C++Y+GNLDE+VSDRVLY+ILIQAGR+VDL+IPRDKET++PKG           
Sbjct: 1   MAGNSGCSVYIGNLDERVSDRVLYDILIQAGRVVDLYIPRDKETDKPKGFAFAEYETEEV 60

Query: 324 XXXXVRLFSGLVNLYNRTLKFA 389
               VRLFSGLV LYNRTLKFA
Sbjct: 61  AEYAVRLFSGLVTLYNRTLKFA 82


>ref|XP_007031677.1| RNA recognition motif-containing protein isoform 1 [Theobroma
           cacao] gi|590646642|ref|XP_007031679.1| RNA recognition
           motif-containing protein isoform 1 [Theobroma cacao]
           gi|508710706|gb|EOY02603.1| RNA recognition
           motif-containing protein isoform 1 [Theobroma cacao]
           gi|508710708|gb|EOY02605.1| RNA recognition
           motif-containing protein isoform 1 [Theobroma cacao]
          Length = 197

 Score =  111 bits (278), Expect = 9e-23
 Identities = 54/82 (65%), Positives = 63/82 (76%)
 Frame = +3

Query: 144 MPGNRACTLYVGNLDEKVSDRVLYEILIQAGRIVDLHIPRDKETNRPKGXXXXXXXXXXX 323
           M GN  C++Y+GNLDE+VSDRVLY+ILIQAGR+VDL+IPRDKET++PKG           
Sbjct: 1   MAGNSGCSVYIGNLDERVSDRVLYDILIQAGRVVDLYIPRDKETDKPKGFAFAEYETEEV 60

Query: 324 XXXXVRLFSGLVNLYNRTLKFA 389
               VRLFSGLV LYNRTLKFA
Sbjct: 61  AEYAVRLFSGLVTLYNRTLKFA 82


>ref|XP_006397101.1| hypothetical protein EUTSA_v10029015mg [Eutrema salsugineum]
           gi|557098118|gb|ESQ38554.1| hypothetical protein
           EUTSA_v10029015mg [Eutrema salsugineum]
          Length = 171

 Score =  111 bits (277), Expect = 1e-22
 Identities = 53/82 (64%), Positives = 64/82 (78%)
 Frame = +3

Query: 144 MPGNRACTLYVGNLDEKVSDRVLYEILIQAGRIVDLHIPRDKETNRPKGXXXXXXXXXXX 323
           M GN  CT+YVGN+DE+VS+RVLY+ILIQAGR++DLHIPRDKET++PKG           
Sbjct: 1   MSGNSNCTVYVGNVDERVSERVLYDILIQAGRVIDLHIPRDKETDKPKGFAFAEYETEEI 60

Query: 324 XXXXVRLFSGLVNLYNRTLKFA 389
               V+LFSGLV+LYNRTLKFA
Sbjct: 61  ADYAVKLFSGLVSLYNRTLKFA 82


>ref|NP_192749.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|26453246|dbj|BAC43696.1| unknown protein [Arabidopsis
           thaliana] gi|28372886|gb|AAO39925.1| At4g10100
           [Arabidopsis thaliana] gi|332657441|gb|AEE82841.1| RNA
           recognition motif-containing protein [Arabidopsis
           thaliana]
          Length = 173

 Score =  109 bits (272), Expect = 5e-22
 Identities = 51/82 (62%), Positives = 63/82 (76%)
 Frame = +3

Query: 144 MPGNRACTLYVGNLDEKVSDRVLYEILIQAGRIVDLHIPRDKETNRPKGXXXXXXXXXXX 323
           M G   CT+Y+GN+DE+VSDRVLY+I+IQAGR++DLHIPRDKET++PKG           
Sbjct: 1   MSGTSNCTVYIGNVDERVSDRVLYDIMIQAGRVIDLHIPRDKETDKPKGFAFAEYETEEI 60

Query: 324 XXXXVRLFSGLVNLYNRTLKFA 389
               V+LFSGLV+LYNRTLKFA
Sbjct: 61  ADYAVKLFSGLVSLYNRTLKFA 82


>ref|XP_006371385.1| RNA recognition motif-containing family protein [Populus
           trichocarpa] gi|550317141|gb|ERP49182.1| RNA recognition
           motif-containing family protein [Populus trichocarpa]
          Length = 195

 Score =  109 bits (272), Expect = 5e-22
 Identities = 52/82 (63%), Positives = 63/82 (76%)
 Frame = +3

Query: 144 MPGNRACTLYVGNLDEKVSDRVLYEILIQAGRIVDLHIPRDKETNRPKGXXXXXXXXXXX 323
           M G  +C++Y+GNLDE+VSDRVLY+ILIQAGR+VDLHIPRD+ET++PKG           
Sbjct: 1   MSGPSSCSIYIGNLDERVSDRVLYDILIQAGRVVDLHIPRDRETDKPKGYAFAEYETEEI 60

Query: 324 XXXXVRLFSGLVNLYNRTLKFA 389
               V+LFSGLV LYNRTLKFA
Sbjct: 61  ADYAVKLFSGLVTLYNRTLKFA 82


>ref|XP_007143666.1| hypothetical protein PHAVU_007G091200g [Phaseolus vulgaris]
           gi|561016856|gb|ESW15660.1| hypothetical protein
           PHAVU_007G091200g [Phaseolus vulgaris]
          Length = 196

 Score =  108 bits (271), Expect = 6e-22
 Identities = 52/82 (63%), Positives = 62/82 (75%)
 Frame = +3

Query: 144 MPGNRACTLYVGNLDEKVSDRVLYEILIQAGRIVDLHIPRDKETNRPKGXXXXXXXXXXX 323
           M GN  C++Y+GNLDE+V+DRVLY+ILIQAGR+VDLHIP+DKE+ +PKG           
Sbjct: 1   MSGNSNCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYESEEI 60

Query: 324 XXXXVRLFSGLVNLYNRTLKFA 389
               VRLFSGLV LYNRTLKFA
Sbjct: 61  ADYAVRLFSGLVTLYNRTLKFA 82


>ref|XP_003592001.1| Peptidyl-prolyl cis-trans isomerase [Medicago truncatula]
           gi|355481049|gb|AES62252.1| Peptidyl-prolyl cis-trans
           isomerase [Medicago truncatula]
          Length = 200

 Score =  108 bits (271), Expect = 6e-22
 Identities = 51/82 (62%), Positives = 62/82 (75%)
 Frame = +3

Query: 144 MPGNRACTLYVGNLDEKVSDRVLYEILIQAGRIVDLHIPRDKETNRPKGXXXXXXXXXXX 323
           M GN +CT+Y+GNLDE+V+DR+LY+ILIQAGR+VDLHIP+DKE+ +PKG           
Sbjct: 1   MSGNSSCTVYIGNLDERVTDRILYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEI 60

Query: 324 XXXXVRLFSGLVNLYNRTLKFA 389
               VRLFSGLV LY RTLKFA
Sbjct: 61  ADYAVRLFSGLVTLYKRTLKFA 82


>gb|ACJ85779.1| unknown [Medicago truncatula]
          Length = 218

 Score =  108 bits (271), Expect = 6e-22
 Identities = 51/82 (62%), Positives = 62/82 (75%)
 Frame = +3

Query: 144 MPGNRACTLYVGNLDEKVSDRVLYEILIQAGRIVDLHIPRDKETNRPKGXXXXXXXXXXX 323
           M GN +CT+Y+GNLDE+V+DR+LY+ILIQAGR+VDLHIP+DKE+ +PKG           
Sbjct: 1   MSGNSSCTVYIGNLDERVTDRILYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEI 60

Query: 324 XXXXVRLFSGLVNLYNRTLKFA 389
               VRLFSGLV LY RTLKFA
Sbjct: 61  ADYAVRLFSGLVTLYKRTLKFA 82


>ref|XP_006589447.1| PREDICTED: splicing factor 3B subunit 4-like isoform X2 [Glycine
           max]
          Length = 142

 Score =  108 bits (270), Expect = 8e-22
 Identities = 51/82 (62%), Positives = 62/82 (75%)
 Frame = +3

Query: 144 MPGNRACTLYVGNLDEKVSDRVLYEILIQAGRIVDLHIPRDKETNRPKGXXXXXXXXXXX 323
           M GN  C++Y+GNLDE+V+DRVLY+ILIQAGR+VDLHIP+DKE+ +PKG           
Sbjct: 1   MSGNSNCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEI 60

Query: 324 XXXXVRLFSGLVNLYNRTLKFA 389
               VRLFSGL+ LYNRTLKFA
Sbjct: 61  ADYAVRLFSGLITLYNRTLKFA 82


>ref|XP_006589446.1| PREDICTED: splicing factor 3B subunit 4-like isoform X1 [Glycine
           max]
          Length = 148

 Score =  108 bits (270), Expect = 8e-22
 Identities = 51/82 (62%), Positives = 62/82 (75%)
 Frame = +3

Query: 144 MPGNRACTLYVGNLDEKVSDRVLYEILIQAGRIVDLHIPRDKETNRPKGXXXXXXXXXXX 323
           M GN  C++Y+GNLDE+V+DRVLY+ILIQAGR+VDLHIP+DKE+ +PKG           
Sbjct: 1   MSGNSNCSVYIGNLDERVTDRVLYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEI 60

Query: 324 XXXXVRLFSGLVNLYNRTLKFA 389
               VRLFSGL+ LYNRTLKFA
Sbjct: 61  ADYAVRLFSGLITLYNRTLKFA 82


>gb|ABC86742.1| RNA recognition motif-containing protein [Vitis pseudoreticulata]
          Length = 194

 Score =  107 bits (266), Expect = 2e-21
 Identities = 52/82 (63%), Positives = 61/82 (74%)
 Frame = +3

Query: 144 MPGNRACTLYVGNLDEKVSDRVLYEILIQAGRIVDLHIPRDKETNRPKGXXXXXXXXXXX 323
           M     C++Y+GNLDE+VSDRVLY+ILIQAGR+VDL+IPRDKET+RPKG           
Sbjct: 1   MSAKSGCSVYIGNLDERVSDRVLYDILIQAGRVVDLYIPRDKETDRPKGFAFAEYETEEI 60

Query: 324 XXXXVRLFSGLVNLYNRTLKFA 389
               V+LFSGLV LYNRTLKFA
Sbjct: 61  ADYAVKLFSGLVTLYNRTLKFA 82


>ref|XP_002271789.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
           gi|297734803|emb|CBI17037.3| unnamed protein product
           [Vitis vinifera]
          Length = 194

 Score =  107 bits (266), Expect = 2e-21
 Identities = 52/82 (63%), Positives = 61/82 (74%)
 Frame = +3

Query: 144 MPGNRACTLYVGNLDEKVSDRVLYEILIQAGRIVDLHIPRDKETNRPKGXXXXXXXXXXX 323
           M     C++Y+GNLDE+VSDRVLY+ILIQAGR+VDL+IPRDKET+RPKG           
Sbjct: 1   MSAKSGCSVYIGNLDERVSDRVLYDILIQAGRVVDLYIPRDKETDRPKGFAFAEYETEEI 60

Query: 324 XXXXVRLFSGLVNLYNRTLKFA 389
               V+LFSGLV LYNRTLKFA
Sbjct: 61  ADYAVKLFSGLVTLYNRTLKFA 82


>ref|XP_004141533.1| PREDICTED: spliceosome-associated protein 49-like [Cucumis sativus]
          Length = 168

 Score =  106 bits (265), Expect = 3e-21
 Identities = 51/79 (64%), Positives = 60/79 (75%)
 Frame = +3

Query: 153 NRACTLYVGNLDEKVSDRVLYEILIQAGRIVDLHIPRDKETNRPKGXXXXXXXXXXXXXX 332
           +  CT+Y+GNLDEKVSDRVLY+ILIQAGR+VDLHIPRDKE+ +PKG              
Sbjct: 5   SNGCTIYIGNLDEKVSDRVLYDILIQAGRVVDLHIPRDKESGKPKGFAFAEYESEEIANY 64

Query: 333 XVRLFSGLVNLYNRTLKFA 389
            V+LFSGLVNL+ RTLKFA
Sbjct: 65  AVKLFSGLVNLHKRTLKFA 83


>ref|XP_002874610.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
           lyrata] gi|297320447|gb|EFH50869.1| RNA recognition
           motif-containing protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 171

 Score =  106 bits (265), Expect = 3e-21
 Identities = 50/82 (60%), Positives = 62/82 (75%)
 Frame = +3

Query: 144 MPGNRACTLYVGNLDEKVSDRVLYEILIQAGRIVDLHIPRDKETNRPKGXXXXXXXXXXX 323
           M  N  CT+Y+GN+DE+VSDRVLY+I+IQAGR++DLHIPRDKET++PKG           
Sbjct: 1   MSTNSNCTVYIGNVDERVSDRVLYDIMIQAGRVIDLHIPRDKETDKPKGFAFAEYETEEI 60

Query: 324 XXXXVRLFSGLVNLYNRTLKFA 389
               V+LFSGLV+LYNR LKFA
Sbjct: 61  ADYAVKLFSGLVSLYNRNLKFA 82


>ref|XP_006356004.1| PREDICTED: splicing factor 3B subunit 4-like isoform X2 [Solanum
           tuberosum]
          Length = 146

 Score =  106 bits (264), Expect = 4e-21
 Identities = 53/82 (64%), Positives = 61/82 (74%)
 Frame = +3

Query: 144 MPGNRACTLYVGNLDEKVSDRVLYEILIQAGRIVDLHIPRDKETNRPKGXXXXXXXXXXX 323
           M  N  CT+YVGNLDE+V DRVLY+ILIQAGR+VDL+IPRDKET++PKG           
Sbjct: 1   MAENPNCTVYVGNLDERVCDRVLYDILIQAGRVVDLYIPRDKETDKPKGFAFAKYETEEI 60

Query: 324 XXXXVRLFSGLVNLYNRTLKFA 389
               V+LFSGLV LYNRTLKFA
Sbjct: 61  ADYAVKLFSGLVTLYNRTLKFA 82


>ref|XP_006356003.1| PREDICTED: splicing factor 3B subunit 4-like isoform X1 [Solanum
           tuberosum]
          Length = 205

 Score =  106 bits (264), Expect = 4e-21
 Identities = 53/82 (64%), Positives = 61/82 (74%)
 Frame = +3

Query: 144 MPGNRACTLYVGNLDEKVSDRVLYEILIQAGRIVDLHIPRDKETNRPKGXXXXXXXXXXX 323
           M  N  CT+YVGNLDE+V DRVLY+ILIQAGR+VDL+IPRDKET++PKG           
Sbjct: 1   MAENPNCTVYVGNLDERVCDRVLYDILIQAGRVVDLYIPRDKETDKPKGFAFAKYETEEI 60

Query: 324 XXXXVRLFSGLVNLYNRTLKFA 389
               V+LFSGLV LYNRTLKFA
Sbjct: 61  ADYAVKLFSGLVTLYNRTLKFA 82


>ref|XP_004250692.1| PREDICTED: splicing regulator RBM11-like [Solanum lycopersicum]
          Length = 199

 Score =  106 bits (264), Expect = 4e-21
 Identities = 53/82 (64%), Positives = 61/82 (74%)
 Frame = +3

Query: 144 MPGNRACTLYVGNLDEKVSDRVLYEILIQAGRIVDLHIPRDKETNRPKGXXXXXXXXXXX 323
           M  N  CT+YVGNLDE+V DRVLY+ILIQAGR+VDL+IPRDKET++PKG           
Sbjct: 1   MAENPNCTVYVGNLDERVCDRVLYDILIQAGRVVDLYIPRDKETDKPKGFAFAKYETEEI 60

Query: 324 XXXXVRLFSGLVNLYNRTLKFA 389
               V+LFSGLV LYNRTLKFA
Sbjct: 61  ADYAVKLFSGLVTLYNRTLKFA 82


>ref|XP_004156245.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus]
          Length = 187

 Score =  105 bits (263), Expect = 5e-21
 Identities = 51/80 (63%), Positives = 62/80 (77%)
 Frame = +3

Query: 150 GNRACTLYVGNLDEKVSDRVLYEILIQAGRIVDLHIPRDKETNRPKGXXXXXXXXXXXXX 329
           G+ ACT+YVGNLDE+VSDRVLY+ILIQAGR+VDLHIPRDK+T +PKG             
Sbjct: 4   GSNACTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKDTGKPKGFAFAVYESEEIAN 63

Query: 330 XXVRLFSGLVNLYNRTLKFA 389
             V+LFSGLV+L++R LKFA
Sbjct: 64  YAVKLFSGLVSLHSRILKFA 83


>ref|XP_004141629.1| PREDICTED: splicing regulator RBM11-like [Cucumis sativus]
          Length = 195

 Score =  105 bits (263), Expect = 5e-21
 Identities = 51/80 (63%), Positives = 62/80 (77%)
 Frame = +3

Query: 150 GNRACTLYVGNLDEKVSDRVLYEILIQAGRIVDLHIPRDKETNRPKGXXXXXXXXXXXXX 329
           G+ ACT+YVGNLDE+VSDRVLY+ILIQAGR+VDLHIPRDK+T +PKG             
Sbjct: 4   GSNACTVYVGNLDERVSDRVLYDILIQAGRVVDLHIPRDKDTGKPKGFAFAVYESEEIAN 63

Query: 330 XXVRLFSGLVNLYNRTLKFA 389
             V+LFSGLV+L++R LKFA
Sbjct: 64  YAVKLFSGLVSLHSRILKFA 83


>gb|EXC32466.1| Splicing factor 3B subunit 4 [Morus notabilis]
          Length = 189

 Score =  105 bits (261), Expect = 9e-21
 Identities = 52/82 (63%), Positives = 61/82 (74%)
 Frame = +3

Query: 144 MPGNRACTLYVGNLDEKVSDRVLYEILIQAGRIVDLHIPRDKETNRPKGXXXXXXXXXXX 323
           M G+   T+Y+GNLDE+VSDRVLY+ILIQAGR+VDL+IPRDKET +PKG           
Sbjct: 1   MSGSSNSTVYIGNLDERVSDRVLYDILIQAGRVVDLYIPRDKETEKPKGYAFAEYETEEI 60

Query: 324 XXXXVRLFSGLVNLYNRTLKFA 389
               V+LFSGLV LYNRTLKFA
Sbjct: 61  ADYAVKLFSGLVTLYNRTLKFA 82